View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5257_low_19 (Length: 272)
Name: NF5257_low_19
Description: NF5257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5257_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 264
Target Start/End: Original strand, 27794010 - 27794257
Alignment:
| Q |
17 |
accttgaagcattgtagaacaagaatttggaccatgaaagtgaaacttaggaaattggaaagagctatgagagacacgagggtgattatgcttttcatga |
116 |
Q |
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| T |
27794010 |
accttgaagcattgtggaacaagaatttggaccatgaaagtgaaacttaggaaattggaaagagctatgagagacacgagggtgattatgcttttcatga |
27794109 |
T |
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| Q |
117 |
tacttctcaacaaaggagtggagatttgttctctcaaagtttgtttgatgatcatttgaagagaaaattgtgtgatgatcaagaggaccttttgcataga |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27794110 |
tacttctcaacaaaggagtggagatttgttctctcaaagtttgtttgatgatcatttgaagagaaaattgtgtgatgatcaagaggaccttttgcataga |
27794209 |
T |
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| Q |
217 |
tcttatacctttctcgacgaatcctcgccatcatcacatgcctatgat |
264 |
Q |
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| T |
27794210 |
tcttatacctttctcgacgaatcctcgccatcatcacatgccaatgat |
27794257 |
T |
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