View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5258_high_62 (Length: 202)

Name: NF5258_high_62
Description: NF5258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5258_high_62
NF5258_high_62
[»] chr8 (32 HSPs)
chr8 (1-78)||(5359442-5359519)
chr8 (1-78)||(37524318-37524395)
chr8 (1-78)||(23258136-23258213)
chr8 (1-76)||(44672125-44672200)
chr8 (1-78)||(41344559-41344636)
chr8 (1-57)||(26871148-26871204)
chr8 (1-78)||(295650-295727)
chr8 (1-78)||(7678836-7678913)
chr8 (1-76)||(38128418-38128493)
chr8 (1-80)||(896011-896086)
chr8 (1-78)||(26294277-26294357)
chr8 (1-78)||(26307534-26307614)
chr8 (1-78)||(21273600-21273677)
chr8 (1-50)||(22767234-22767283)
chr8 (1-78)||(40413253-40413330)
chr8 (1-77)||(42689889-42689963)
chr8 (1-69)||(22852738-22852806)
chr8 (3-78)||(27776267-27776342)
chr8 (1-72)||(28473441-28473512)
chr8 (1-51)||(426205-426255)
chr8 (1-43)||(16011842-16011884)
chr8 (1-78)||(11223749-11223826)
chr8 (1-74)||(28927785-28927858)
chr8 (1-57)||(24503021-24503077)
chr8 (3-42)||(26507829-26507868)
chr8 (4-70)||(9738591-9738657)
chr8 (1-78)||(37101575-37101653)
chr8 (1-42)||(3989009-3989050)
chr8 (9-78)||(42941577-42941646)
chr8 (3-32)||(42996568-42996597)
chr8 (1-78)||(5502464-5502543)
chr8 (1-76)||(18538481-18538557)
[»] chr6 (16 HSPs)
chr6 (1-78)||(1897790-1897867)
chr6 (1-74)||(2582766-2582839)
chr6 (3-78)||(30906553-30906628)
chr6 (1-78)||(16336960-16337037)
chr6 (1-74)||(32457146-32457219)
chr6 (1-78)||(32853034-32853111)
chr6 (1-78)||(34021062-34021139)
chr6 (1-78)||(32253884-32253962)
chr6 (1-42)||(29383661-29383702)
chr6 (3-78)||(24752337-24752412)
chr6 (4-78)||(30733116-30733190)
chr6 (1-78)||(2340502-2340579)
chr6 (1-70)||(10387715-10387784)
chr6 (4-81)||(21857456-21857533)
chr6 (3-40)||(34490453-34490490)
chr6 (3-39)||(8395443-8395479)
[»] chr4 (47 HSPs)
chr4 (1-78)||(4896390-4896467)
chr4 (3-75)||(23690337-23690409)
chr4 (3-78)||(51296067-51296142)
chr4 (1-78)||(31275250-31275327)
chr4 (1-74)||(24772775-24772848)
chr4 (1-78)||(42915109-42915186)
chr4 (1-78)||(55927088-55927165)
chr4 (3-78)||(16004217-16004291)
chr4 (4-78)||(51717174-51717248)
chr4 (1-78)||(5234361-5234438)
chr4 (1-78)||(29384087-29384164)
chr4 (1-78)||(38952793-38952870)
chr4 (9-78)||(28480428-28480497)
chr4 (9-78)||(28481302-28481371)
chr4 (9-78)||(28482177-28482246)
chr4 (1-74)||(36408098-36408171)
chr4 (1-74)||(36413221-36413294)
chr4 (1-78)||(36444285-36444362)
chr4 (1-75)||(39844151-39844225)
chr4 (1-75)||(51389420-51389494)
chr4 (1-58)||(9162170-9162227)
chr4 (1-78)||(15596500-15596577)
chr4 (1-78)||(30778154-30778231)
chr4 (1-78)||(31658023-31658100)
chr4 (1-78)||(46173641-46173718)
chr4 (1-78)||(47998698-47998774)
chr4 (3-78)||(37249015-37249090)
chr4 (12-74)||(525838-525900)
chr4 (1-78)||(31240752-31240830)
chr4 (1-78)||(36122943-36123021)
chr4 (1-73)||(36512946-36513018)
chr4 (16-78)||(1033267-1033329)
chr4 (1-78)||(2613506-2613584)
chr4 (1-43)||(34974557-34974599)
chr4 (9-78)||(48372115-48372185)
chr4 (1-74)||(3286922-3286995)
chr4 (5-78)||(5123480-5123553)
chr4 (4-33)||(12074086-12074115)
chr4 (1-73)||(18874818-18874891)
chr4 (3-32)||(24337292-24337321)
chr4 (1-78)||(25523086-25523163)
chr4 (1-50)||(38844408-38844457)
chr4 (1-30)||(46912002-46912031)
chr4 (1-29)||(28676093-28676121)
chr4 (3-78)||(36792438-36792514)
chr4 (4-76)||(47471907-47471979)
chr4 (1-57)||(53091141-53091197)
[»] chr3 (38 HSPs)
chr3 (1-78)||(47849774-47849851)
chr3 (3-78)||(52727338-52727413)
chr3 (1-78)||(7231896-7231973)
chr3 (1-74)||(19418054-19418127)
chr3 (1-78)||(29706007-29706084)
chr3 (1-78)||(34733184-34733260)
chr3 (1-78)||(20380779-20380856)
chr3 (1-71)||(11173554-11173624)
chr3 (3-78)||(34271376-34271453)
chr3 (1-78)||(28300536-28300613)
chr3 (1-78)||(37302964-37303041)
chr3 (1-78)||(37303487-37303564)
chr3 (1-78)||(41111962-41112039)
chr3 (1-78)||(41957617-41957694)
chr3 (1-78)||(46473232-46473309)
chr3 (1-76)||(49130958-49131033)
chr3 (1-78)||(35272131-35272209)
chr3 (10-78)||(30839570-30839638)
chr3 (1-78)||(41877499-41877578)
chr3 (1-79)||(28269910-28269988)
chr3 (1-78)||(32687849-32687927)
chr3 (1-50)||(5188340-5188389)
chr3 (1-50)||(37215149-37215198)
chr3 (6-78)||(46315845-46315917)
chr3 (1-32)||(39604182-39604213)
chr3 (1-40)||(43409293-43409332)
chr3 (1-78)||(6126558-6126636)
chr3 (3-78)||(32457643-32457720)
chr3 (1-78)||(33007464-33007542)
chr3 (1-78)||(8066459-8066535)
chr3 (1-73)||(27198048-27198121)
chr3 (1-74)||(48945951-48946024)
chr3 (1-29)||(34628014-34628042)
chr3 (1-29)||(36799502-36799530)
chr3 (3-43)||(39540341-39540381)
chr3 (1-29)||(41717367-41717395)
chr3 (1-76)||(44127083-44127159)
chr3 (1-29)||(49457669-49457697)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-78)||(38985-39060)
[»] chr7 (40 HSPs)
chr7 (1-78)||(37856071-37856148)
chr7 (1-78)||(48866820-48866897)
chr7 (1-78)||(30180611-30180688)
chr7 (1-78)||(37351880-37351957)
chr7 (1-78)||(5978683-5978760)
chr7 (1-78)||(21752762-21752839)
chr7 (3-74)||(32933653-32933724)
chr7 (1-78)||(5378731-5378808)
chr7 (1-78)||(12141988-12142065)
chr7 (1-78)||(33684784-33684861)
chr7 (1-78)||(46651776-46651853)
chr7 (6-78)||(43445516-43445588)
chr7 (1-78)||(6353832-6353910)
chr7 (1-79)||(21839022-21839100)
chr7 (1-78)||(34348917-34348994)
chr7 (1-42)||(39875735-39875776)
chr7 (1-78)||(44894364-44894441)
chr7 (1-78)||(8792490-8792564)
chr7 (1-78)||(2790281-2790359)
chr7 (35-81)||(7990211-7990257)
chr7 (4-78)||(38995913-38995987)
chr7 (1-74)||(7077647-7077720)
chr7 (1-78)||(10591257-10591333)
chr7 (1-78)||(21858851-21858928)
chr7 (1-78)||(25887687-25887764)
chr7 (1-78)||(41966432-41966509)
chr7 (1-78)||(45607128-45607205)
chr7 (3-39)||(32171052-32171088)
chr7 (1-75)||(5198652-5198727)
chr7 (1-32)||(42204662-42204693)
chr7 (1-78)||(32315930-32316008)
chr7 (1-78)||(155871-155948)
chr7 (1-50)||(12102627-12102676)
chr7 (1-78)||(19510247-19510324)
chr7 (3-32)||(34304616-34304645)
chr7 (1-30)||(41077442-41077471)
chr7 (1-58)||(43025911-43025968)
chr7 (1-29)||(29034189-29034217)
chr7 (3-78)||(40717128-40717204)
chr7 (1-51)||(41254880-41254927)
[»] chr2 (37 HSPs)
chr2 (1-78)||(3091845-3091922)
chr2 (1-78)||(39454137-39454214)
chr2 (1-78)||(14140229-14140306)
chr2 (1-78)||(23344879-23344956)
chr2 (1-78)||(29795540-29795617)
chr2 (1-78)||(22390256-22390333)
chr2 (1-73)||(36435785-36435857)
chr2 (1-75)||(6365290-6365364)
chr2 (1-78)||(2013175-2013252)
chr2 (1-74)||(11164270-11164343)
chr2 (1-78)||(34442217-34442294)
chr2 (4-78)||(42251810-42251884)
chr2 (1-78)||(44189931-44190006)
chr2 (1-78)||(13711165-13711242)
chr2 (1-78)||(14714090-14714167)
chr2 (9-78)||(36133086-36133155)
chr2 (1-78)||(42081141-42081218)
chr2 (9-76)||(12600160-12600227)
chr2 (1-75)||(25801704-25801778)
chr2 (4-78)||(43650437-43650511)
chr2 (4-42)||(31296769-31296807)
chr2 (1-75)||(36376744-36376818)
chr2 (1-42)||(1889251-1889292)
chr2 (1-73)||(8555186-8555259)
chr2 (1-78)||(11229211-11229288)
chr2 (1-78)||(12962490-12962567)
chr2 (1-78)||(13104583-13104660)
chr2 (1-78)||(32750102-32750179)
chr2 (1-51)||(3960000-3960050)
chr2 (1-51)||(37631284-37631334)
chr2 (1-78)||(5455343-5455420)
chr2 (1-78)||(7086014-7086091)
chr2 (1-30)||(34249684-34249713)
chr2 (1-58)||(39285957-39286014)
chr2 (1-74)||(43725309-43725382)
chr2 (1-29)||(30856911-30856939)
chr2 (1-29)||(36763459-36763487)
[»] chr5 (29 HSPs)
chr5 (1-76)||(28811532-28811607)
chr5 (1-78)||(33567129-33567206)
chr5 (3-72)||(34767313-34767382)
chr5 (3-78)||(20719905-20719980)
chr5 (1-79)||(125196-125274)
chr5 (1-78)||(2117530-2117607)
chr5 (1-78)||(11306800-11306877)
chr5 (1-78)||(39595378-39595455)
chr5 (1-73)||(4834924-4834996)
chr5 (1-76)||(13613855-13613931)
chr5 (1-78)||(19376022-19376099)
chr5 (9-78)||(24431508-24431577)
chr5 (4-78)||(10232606-10232681)
chr5 (1-78)||(5130267-5130345)
chr5 (1-78)||(9714025-9714103)
chr5 (1-78)||(40566106-40566184)
chr5 (1-78)||(12718270-12718347)
chr5 (1-78)||(19127228-19127305)
chr5 (1-78)||(27392592-27392669)
chr5 (1-78)||(33243631-33243708)
chr5 (1-74)||(34381116-34381189)
chr5 (1-78)||(15531779-15531858)
chr5 (1-41)||(21749462-21749502)
chr5 (1-32)||(11666283-11666314)
chr5 (4-74)||(12661840-12661911)
chr5 (1-39)||(8087903-8087941)
chr5 (1-75)||(31284287-31284361)
chr5 (1-78)||(12779496-12779573)
chr5 (1-29)||(23991335-23991363)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-78)||(113729-113806)
[»] chr1 (39 HSPs)
chr1 (1-78)||(40610333-40610410)
chr1 (1-78)||(46948083-46948160)
chr1 (3-78)||(31427847-31427922)
chr1 (1-78)||(49453584-49453658)
chr1 (1-75)||(50061869-50061943)
chr1 (1-76)||(50141827-50141902)
chr1 (1-58)||(5477073-5477130)
chr1 (1-78)||(39010918-39010995)
chr1 (1-78)||(45740434-45740511)
chr1 (1-78)||(50659082-50659159)
chr1 (3-78)||(14002631-14002707)
chr1 (1-73)||(40595949-40596021)
chr1 (3-78)||(22389416-22389490)
chr1 (4-78)||(2362476-2362550)
chr1 (3-69)||(36418185-36418251)
chr1 (1-74)||(15466851-15466924)
chr1 (1-78)||(30631735-30631812)
chr1 (1-82)||(51702998-51703078)
chr1 (1-78)||(37843325-37843399)
chr1 (1-78)||(7645444-7645519)
chr1 (1-51)||(16836031-16836081)
chr1 (4-73)||(29294055-29294122)
chr1 (1-78)||(31480024-31480102)
chr1 (1-51)||(32966371-32966421)
chr1 (1-79)||(35846208-35846286)
chr1 (3-75)||(7503571-7503644)
chr1 (1-78)||(18610874-18610951)
chr1 (1-50)||(28253119-28253168)
chr1 (4-73)||(29264110-29264179)
chr1 (1-74)||(31290102-31290175)
chr1 (1-78)||(36690462-36690539)
chr1 (1-78)||(36706563-36706640)
chr1 (9-58)||(37690527-37690576)
chr1 (1-29)||(4604633-4604661)
chr1 (1-29)||(16987551-16987579)
chr1 (1-29)||(43640926-43640954)
chr1 (1-29)||(47059829-47059857)
chr1 (1-29)||(50527996-50528024)
chr1 (3-74)||(51571534-51571603)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-58)||(11296-11353)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-76)||(190777-190852)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-72)||(6531-6602)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-78)||(11426-11503)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-78)||(18108-18184)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-78)||(9738-9815)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-78)||(15079-15155)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-78)||(119937-120014)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-78)||(36105-36183)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-75)||(10409-10483)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-42)||(219590-219631)


Alignment Details
Target: chr8 (Bit Score: 62; Significance: 5e-27; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5359442 - 5359519
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  5359442 tgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactact 5359519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37524395 - 37524318
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  |||||||||  ||| ||||||||| |||||||||||||||||||    
T  37524395 tgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatcactact 37524318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23258136 - 23258213
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||   ||||||||||||||||||    
T  23258136 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactact 23258213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44672200 - 44672125
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||| ||||||||||||||||||||||||   |||||||| |||||| |||||||| ||||||||||||||||    
T  44672200 tgtttttaaccaatgaaaagagagaaaaaagaatgtgtcacaaaagttgtatcaaataattgttcaaatatcacta 44672125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41344636 - 41344559
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  || ||| ||||||||| ||||||  |||||||||||||||||||    
T  41344636 tgtttttgaccaatgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactact 41344559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26871148 - 26871204
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat 57  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  26871148 tgtttttgaccaatgaaaagagagagaaaagaaattgtcacaagagttgtctcaaat 26871204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 295650 - 295727
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| |||||||||| | |||||||||| |||| | |||||||  |||||||||| |||||||    
T  295650 tgtttttgaccaatgaaaatagagaaaaaataaattgtcacaaaagttatctcaaatagttgttcaaataacactact 295727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7678836 - 7678913
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  |||| |||| |||||| |||||||  ||||||||||||| ||||    
T  7678836 tgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcattact 7678913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38128493 - 38128418
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    |||||||||||||||||||| |||||||||||  ||||||||| | |||||| ||||   ||||||||||||||||    
T  38128493 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatcacta 38128418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 896011 - 896086
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactactat 80  Q
    ||||||||||||||||||||||||||||||||  |||| | || |||||| ||    |||||||||||||||||||||||    
T  896011 tgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaagttgtctc----aaatgttcaaatatcactactat 896086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26294277 - 26294357
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa---gatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| | | ||||||   ||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  26294277 tgtttttgaccaatgaaaaaaaaaaaaaaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactact 26294357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26307534 - 26307614
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa---gatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| | | ||||||   ||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  26307534 tgtttttgaccaatgaaaaaaaaaaaaaaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactact 26307614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21273677 - 21273600
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||| | |  ||||||||| |||||| | |||||  ||||||||||||||||||    
T  21273677 tgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactact 21273600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22767234 - 22767283
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  22767234 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40413330 - 40413253
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||| |||||||||||||||||||||  || ||| || |||||| ||||||   ||||||||||||||||||    
T  40413330 tgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactact 40413253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42689889 - 42689963
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactac 77  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||  |  ||||||  |||||||||||||||||    
T  42689889 tgtttttaaccaatgaaaagagagaaaaaagaaattgtcacaaaagt--taacaaatagttgttcaaatatcactac 42689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22852806 - 22852738
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaat 69  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| | |||||| |||||  |||||||||    
T  22852806 tgtttttgacaaatgaaaagtgagaaaaaagaaattgtcacaaaaattgtttaaaatagttgttcaaat 22852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 27776267 - 27776342
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||| ||||||||| ||||| | |||||||| | | |||| |||||||| || |||||||||||||||    
T  27776267 tttttgaccaataaaaagagaggaaaaaaaaattgtcaccaaaattgtctcaaataattgatcaaatatcactact 27776342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28473512 - 28473441
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatc 72  Q
    ||||||| ||||||||||||||||||||||||  |||| | || | |||| |||| ||||||||||||||||    
T  28473512 tgttttttaccaatgaaaagagagaaaaaagaagttgttaaaaaaattgtctcaattaaatgttcaaatatc 28473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 426205 - 426255
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    ||||||||||||||||||||||||||||||||  ||||||||  |||||||    
T  426205 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtt 426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16011884 - 16011842
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaa 43  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  16011884 tgtttttaaccaatgaaaagagagaaaaaagaaattgtcacaa 16011842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11223826 - 11223749
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||| |||||||||||  ||||  ||| |||||| |||||  | ||||||||||||||||||    
T  11223826 tgttttttaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaaagattgttcaaatatcactact 11223749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28927785 - 28927858
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||||||||||||||||||| ||||||  ||||||||| | || | ||||||   ||||||||||||||    
T  28927785 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatatcac 28927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24503021 - 24503077
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat 57  Q
    ||||||||||||||||||||||||||||| ||  |||||| || |||||| ||||||    
T  24503021 tgtttttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaat 24503077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 26507868 - 26507829
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  26507868 tttttgaccaatgaaaagagagaaaaaagaagttgtcaca 26507829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 9738657 - 9738591
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaata 70  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| | ||| |||  ||||||||||    
T  9738657 ttttgaccaataaaaaaagagaaaaaagaaattgtcacaaaagttatctcatatagctgttcaaata 9738591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37101653 - 37101575
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcac-aagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||||| || | |||| | ||||   ||||||||||||||||||    
T  37101653 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactact 37101575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3989009 - 3989050
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    |||||||||| |||||||||||||||||||||  ||||||||    
T  3989009 tgtttttgactaatgaaaagagagaaaaaagaagttgtcaca 3989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 42941646 - 42941577
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||| ||||| |||||||||||  ||||||||| |  | |||||||| | ||||||||||||||||||    
T  42941646 accaataaaaagtgagaaaaaagaagttgtcacaaaaaatatttcaaattattgttcaaatatcactact 42941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 42996568 - 42996597
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||    
T  42996568 tttttgaccaatgaaaagagagaaaaaaga 42996597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5502464 - 5502543
Alignment:
Q  1 tgtttttgaccaatgaaaag--agagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||  ||||| | ||||  ||||||||| | || | |||||| | ||||||||||||||||||    
T  5502464 tgtttttgaccaatgaaaagatagagagagaagaagttgtcacaaaaattatatcaaatgattgttcaaatatcactact 5502543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18538481 - 18538557
Alignment:
Q  1 tgtttttgaccaatgaaaagagag-aaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    |||||||||||||| ||||||| | ||||||||  ||||||||| |||||   ||||||  ||||||||||||||||    
T  18538481 tgtttttgaccaataaaaagagggaaaaaaagaagttgtcacaaaagttgaaccaaatagttgttcaaatatcacta 18538557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 5e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1897790 - 1897867
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  1897790 tgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactact 1897867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2582766 - 2582839
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||    
T  2582766 tgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcac 2582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 30906628 - 30906553
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||| |||||| |||||||||| |||||| ||||||| ||||||||||||||||  |||||||||||||||||||    
T  30906628 tttttaaccaataaaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactact 30906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16337037 - 16336960
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| || |||  |||||||||||||||| ||||||  |||||||||||||| ||||    
T  16337037 tgtttttgaccaatgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattact 16336960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32457219 - 32457146
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||||||||||||| ||||||||||||  || |||||| | |||||||||||| ||||| |||||||||    
T  32457219 tgtttttgaccaatgaaaaaagagaaaaaagaggttatcacaaaatttgtttcaaatagatgtttaaatatcac 32457146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32853111 - 32853034
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||| ||||||||||||  ||||||||| | |||| |||||||  ||||||||||||||||||    
T  32853111 tgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactact 32853034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34021139 - 34021062
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  |||| | || |||||| ||||||  |||||||||||||||||||    
T  34021139 tgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 34021062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32253884 - 32253962
Alignment:
Q  1 tgtttttgaccaatgaaaagagaga-aaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||| ||||| | |||||||||| ||||||  ||||||  ||||||||||||||||||    
T  32253884 tgtttttaaccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactact 32253962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29383661 - 29383702
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  29383661 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 29383702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 24752337 - 24752412
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||||||    
T  24752337 tttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 30733116 - 30733190
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||| |||| |||||| ||| | |||||||||| |||||| ||||||   |||| |||||||||||||    
T  30733116 ttttgaccaataaaaaaagagaacaaaaaaattgtcacaaaagttgtctcaaatggttgtttaaatatcactact 30733190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2340502 - 2340579
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||| ||||||| ||||||||||||||  | ||| | |||| |||||| |||||| | |||| |||||||||||||    
T  2340502 tgttttcgaccaataaaaagagagaaaaagaaaattattacaaaagttgtctcaaatgattgtttaaatatcactact 2340579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10387784 - 10387715
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaata 70  Q
    |||||||||||||| |||||| |||||||||| ||| |||||| |||| | ||| || | ||||||||||    
T  10387784 tgtttttgaccaataaaaagatagaaaaaagaaattatcacaaaagttatctcatatgattgttcaaata 10387715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 21857533 - 21857456
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactactatt 81  Q
    |||||| |||| |||||||||||||||||  |||||| || | |||| ||| |||  | |||||||||||||||||||    
T  21857533 ttttgatcaataaaaagagagaaaaaagaagttgtcataaaaattgtctcatatagttattcaaatatcactactatt 21857456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34490453 - 34490490
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtca 40  Q
    ||||||||||||||||||||||||||| || |||||||    
T  34490453 tttttgaccaatgaaaagagagaaaaaggagattgtca 34490490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8395443 - 8395479
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtc 39  Q
    |||||||||||||||||||||||||||| | ||||||    
T  8395443 tttttgaccaatgaaaagagagaaaaaataaattgtc 8395479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 5e-27; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4896467 - 4896390
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  4896467 tgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactact 4896390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 23690337 - 23690409
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  23690337 tttttgaccaatgaaaagagagaaaaaagatattgtcacaaaaattgtttcaaatagatgttcaaatatcact 23690409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 51296142 - 51296067
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  51296142 tttttgaccaatagaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactact 51296067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31275250 - 31275327
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||   ||||||||||||||||||    
T  31275250 tgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactact 31275327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24772775 - 24772848
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||  |||||||||||||||    
T  24772775 tgtttttgaccaataaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgttcaaatatcac 24772848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42915186 - 42915109
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  42915186 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactact 42915109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 55927088 - 55927165
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| |||||| |||||||||| | |||| ||||||  |||||||||||||||||||    
T  55927088 tgtttttgaccaatgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactact 55927165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 16004291 - 16004217
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||| ||||||  |||||||||||||||||||    
T  16004291 tttttgaccaatgaaaagagagaaaaaaaag-ttgtcacaagagttgtctcaaatggatgttcaaatatcactact 16004217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 51717248 - 51717174
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||| ||| || | ||||||||||||||||||    
T  51717248 ttttgaccaatgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactact 51717174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5234438 - 5234361
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| ||||||||||||||| | |||||||||| |||||| ||||||   ||||||||||||||||||    
T  5234438 tgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactact 5234361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29384164 - 29384087
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| |||||||| |||  |||||||||||||||| ||| || | ||||||||||||||||||    
T  29384164 tgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagagttgtatcatatgattgttcaaatatcactact 29384087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38952793 - 38952870
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| | |||| |||||||| |||| |||||||||||||    
T  38952793 tgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgtatcaaataattgtttaaatatcactact 38952870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 28480497 - 28480428
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||| ||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  28480497 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactact 28480428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 28481371 - 28481302
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||| ||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  28481371 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactact 28481302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 28482246 - 28482177
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||| ||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  28482246 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactact 28482177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36408171 - 36408098
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| || |||||||||||| |||||||| |||||||||| |||||| |||||||  ||||||||||||||    
T  36408171 tgtttttaactaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcac 36408098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36413294 - 36413221
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| || |||||||||||| |||||||| |||||||||| |||||| |||||||  ||||||||||||||    
T  36413294 tgtttttaactaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcac 36413221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36444362 - 36444285
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| |||||||| |||  ||||||||||| |||| ||| || | ||||||||||||||||||    
T  36444362 tgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagaattgtatcatatgattgttcaaatatcactact 36444285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39844225 - 39844151
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    |||||||||||||| |||||||||||||||||  |||| | || |||||| |||| || ||||||||||||||||    
T  39844225 tgtttttgaccaataaaaagagagaaaaaagaagttgttaaaaaagttgtctcaattagatgttcaaatatcact 39844151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51389420 - 51389494
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||| || |||||||||||||||||||||  ||||||||| |||||| ||||||   |||||||||||||||    
T  51389420 tgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcact 51389494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9162170 - 9162227
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | |||| |||||||    
T  9162170 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaata 9162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15596500 - 15596577
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||| ||||||||||||  |||||||||||  ||||||||| |||||||| ||||   ||||||||||||||||||    
T  15596500 tgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactact 15596577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30778231 - 30778154
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||| ||||||||||||||||| ||||||| || |||| | |||||||  ||||||||||||| ||||    
T  30778231 tgtttttaaccaataaaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattact 30778154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31658023 - 31658100
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||||||| || ||| ||||||   |||||||||||| |||||    
T  31658023 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatcgctact 31658100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46173641 - 46173718
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||| |||||||| |||||||||| |||||| ||||||   | ||||||||||| ||||    
T  46173641 tgttttttaccaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattact 46173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47998698 - 47998774
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| |||||||| |  || |||||| |||||| |||||| | ||||||||||||||||||    
T  47998698 tgtttttgaccaatgaaaagaaagaaaaaa-aagttatcacaaaagttgtatcaaatgattgttcaaatatcactact 47998774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 37249015 - 37249090
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||| |||| ||||||||||||  || || ||| |||||||||||||| |||||||||||||| ||||    
T  37249015 tttttgagcaataaaaatagagaaaaaagaggttatctcaaaagttgtttcaaatagatgttcaaatatcattact 37249090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 525838 - 525900
Alignment:
Q  12 aatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||||||| |||| | |||||||||| |||||| |||||||| ||||||| ||||||    
T  525838 aatgaaaagagagagaaaaaaaattgtcacaaaagttgtctcaaataattgttcaattatcac 525900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31240752 - 31240830
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  |||||| ||| |||||| | ||||   ||||||||||||||||||    
T  31240752 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactact 31240830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36123021 - 36122943
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaa-tgttcaaatatcactact 78  Q
    |||||||||||||| |||| ||||||||||||  ||||||||  |||||||| ||||||| ||||  ||||||||||||    
T  36123021 tgtttttgaccaatcaaaatagagaaaaaagaagttgtcacatcagttgtttaaaataaattgttttaatatcactact 36122943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36512946 - 36513018
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    ||||||| |||||| |||||||||| ||||||  ||||||||||| |||| ||||||  || |||||||||||    
T  36512946 tgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatatca 36513018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 1033267 - 1033329
Alignment:
Q  16 aaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||| ||||||||||||  ||||||||| |||||||| ||||   ||||||||||||||||||    
T  1033267 aaaaaagagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactact 1033329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2613584 - 2613506
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| |||||||||| |||  | |||||||||| ||||||| ||||||   ||||||||||||| ||||    
T  2613584 tgtttttgaccaattaaaagagagagaaagtagattgtcacaaaagttgttatcaaatggttgttcaaatatcattact 2613506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34974557 - 34974599
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaa 43  Q
    |||||||||||||||||||| |||||||||||  |||||||||    
T  34974557 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaa 34974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 48372185 - 48372115
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcac-aagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||  ||||||| || | |||| | |||||  ||||||||||||||||||    
T  48372185 accaatgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactact 48372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3286922 - 3286995
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| |||||||||||  ||||||||| | |||||||||| |||||| | ||||   ||||||||||||||    
T  3286922 tgtttttaaccaatgaaaaaggagaaaaaataaattgtcacaaaagttgtgtgaaatggttgttcaaatatcac 3286995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5123553 - 5123480
Alignment:
Q  5 tttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||| ||||||||||||||| |  ||||||||| |||||| ||| ||   |||||||||| |||||||    
T  5123553 tttgaccaattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 5123480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 12074115 - 12074086
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagat 33  Q
    ||||||||||||||||||||||||||||||    
T  12074115 ttttgaccaatgaaaagagagaaaaaagat 12074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18874891 - 18874818
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatca 73  Q
    |||||||||||||||| |||||||||||| ||  |||||| || |||||||  ||||| | |||||||||||||    
T  18874891 tgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatca 18874818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 24337321 - 24337292
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||    
T  24337321 tttttgaccaatgaaaagagagaaaaaaga 24337292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25523163 - 25523086
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| |||| |  || |||||| |||||| ||| ||   |||||||||| |||||||    
T  25523163 tgtttttgaccaatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacactact 25523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38844457 - 38844408
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    ||||||||||||||||||||||||| |||| |  ||||||||| ||||||    
T  38844457 tgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgt 38844408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46912002 - 46912031
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  46912002 tgtttttgaccaatgaaaagagagaaaaaa 46912031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28676121 - 28676093
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  28676121 tgtttttgaccaatgaaaagagagaaaaa 28676093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 36792438 - 36792514
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||| ||||||||||||||||| ||||||  |||||| ||| |||||| | ||||   ||||||||||||||||||    
T  36792438 tttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactact 36792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 47471907 - 47471979
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||||||| |||||||||| |||| |  ||||||||| | || || ||||||| | ||||||||||||||    
T  47471907 ttttgaccaataaaaagagagagaaaataagttgtcacaaaaattattgcaaataattattcaaatatcacta 47471979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 53091197 - 53091141
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat 57  Q
    |||||||||||||| |||  ||||||||||||  ||||||||| |||||| ||||||    
T  53091197 tgtttttgaccaataaaagaagagaaaaaagaagttgtcacaaaagttgtatcaaat 53091141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 5e-27; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47849774 - 47849851
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||    
T  47849774 tgtttttgaccaatgaaaagagagaaaaaagaggctgtcacaagagttgtttcaaatagatgttcaaatatcactact 47849851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 52727413 - 52727338
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||| |||||||||||| |||||||||| | |||||||||||| ||||| |||||||||||||    
T  52727413 tttttgaccaatgaaaatagagaaaaaagagattgtcacaaaaattgtttcaaatagatgtttaaatatcactact 52727338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7231973 - 7231896
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||| ||||||   ||||||||||||||||||    
T  7231973 tgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactact 7231896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19418127 - 19418054
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||||  |||||||||||||||    
T  19418127 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcac 19418054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29706007 - 29706084
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  29706007 tgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactact 29706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34733260 - 34733184
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||| ||||| |||||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||    
T  34733260 tgtttttgaccaa-gaaaaaagagaaaaaagagattgtctcaaaagttgtttcaaatagatgttcaaatatcactact 34733184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20380856 - 20380779
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||||||| |||||||| ||||   ||||||||||||||||||    
T  20380856 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactact 20380779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11173554 - 11173624
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatat 71  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||   |||||||||||    
T  11173554 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatat 11173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 34271453 - 34271376
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat--aaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| |||||  ||| |||||||||||||  | || ||||||||||||||||    
T  34271453 tttttgaccaatgaaaagagagaaaaaagagattgtatcaaaagttgtttcaaatagatatcttcaaatatcactact 34271376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28300613 - 28300536
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| | |  |||||||||||||||| ||| ||   ||||||||||||||||||    
T  28300613 tgtttttgaccaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactact 28300536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37303041 - 37302964
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||| ||| ||   |||||||||| |||||||    
T  37303041 tgttttttaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaataacactact 37302964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37303487 - 37303564
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||| |||||||||||||||||||| | |||||||||| |||||| ||| |||  |||||||||| |||||||    
T  37303487 tgtttttgatcaatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacactact 37303564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41112039 - 41111962
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  |||| | || |||||| ||||||  |||||||||||||||||||    
T  41112039 tgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 41111962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41957617 - 41957694
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| ||||||||||| ||| |||||| |||||||| ||||   |||| |||||||||||||    
T  41957617 tgtttttgaccaatgaaaagtgagaaaaaagaaattatcacaaaagttgtttaaaatggttgtttaaatatcactact 41957694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46473232 - 46473309
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  |||||| || |||||| ||||||   ||||||||||||| ||||    
T  46473232 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattact 46473309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49130958 - 49131033
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    |||||||||| |||||||||||||| ||||||  ||||||||| | |||| ||||||  |||||||||||||||||    
T  49130958 tgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcacta 49131033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35272131 - 35272209
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat-aaatgttcaaatatcactact 78  Q
    |||||||||||||| |||||||||||||||||  ||||||||  |||||| | |||| || ||||||||||||||||||    
T  35272131 tgtttttgaccaataaaaagagagaaaaaagaagttgtcacataagttgtctaaaatgaattgttcaaatatcactact 35272209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 30839570 - 30839638
Alignment:
Q  10 ccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| |||  |||||||||||||||| ||| || | |||| |||||||||||||    
T  30839570 ccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatgattgtttaaatatcactact 30839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 41877578 - 41877499
Alignment:
Q  1 tgtttttgaccaatgaaaagagaga-aaaaagatattgtcacaagagttgtttcaaat-aaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||| |||||||||  |||||| | |||| || |||||||||| |||||||    
T  41877578 tgtttttgaccaatgaaaagagagagaaaaagaaattgtcacataagttgtctaaaatgaattgttcaaataccactact 41877499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28269910 - 28269988
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactacta 79  Q
    ||||||||||||||||||||| ||||||||||  ||||| ||| |||||| ||| ||   |||||||||| ||||||||    
T  28269910 tgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaataacactacta 28269988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32687927 - 32687849
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  || ||| ||| |||||| |||||||  ||||||||||||| ||||    
T  32687927 tgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattact 32687849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5188340 - 5188389
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| ||||||    
T  5188340 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 5188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37215198 - 37215149
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    |||||||||||||||||||||||||||||| |  ||||||||| ||||||    
T  37215198 tgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 46315917 - 46315845
Alignment:
Q  6 ttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||| ||| |||| |  |||||||||||||||| || |||  |||||||||||||| ||||    
T  46315917 ttgaccaatgaaaagaaagataaaaaaagttgtcacaagagttgtctcgaatggatgttcaaatatcaatact 46315845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39604213 - 39604182
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  39604213 tgtttttgaccaatgaaaagagagaaaaaaga 39604182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43409332 - 43409293
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca 40  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  43409332 tgtttttgaccaatgaaaagagagaaaaaaaagattgtca 43409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6126558 - 6126636
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  |||| | ||| |||||| | ||||   ||||||||||||||||||    
T  6126558 tgtttttaaccaatgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactact 6126636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 32457720 - 32457643
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtc--acaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||| ||||||||||||||||||||||||  |||||  | || | |||| |||||||  ||||||||||||||||||    
T  32457720 tttttaaccaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactact 32457643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33007464 - 33007542
Alignment:
Q  1 tgtttttgaccaatgaaaagagag-aaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| | |||| ||| ||   |||||||||| |||||||    
T  33007464 tgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtctcatatggttgttcaaataacactact 33007542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 8066459 - 8066535
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||| ||||| |  ||||||||| |||||| ||| || | |||| ||||| |||||||    
T  8066459 tgtttttgaccaatgaaaagagag-aaaaataagttgtcacaatagttgtctcatatgattgtttaaataacactact 8066535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27198121 - 27198048
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatca 73  Q
    ||||||| ||||||||||||||||||||| ||  |||||| || |||||||  ||||| | |||||||||||||    
T  27198121 tgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatca 27198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48945951 - 48946024
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||||||||||||  |||||||||||  || ||| |  | ||||||||||| | ||||||||||||||    
T  48945951 tgtttttgaccaatgaaaattgagaaaaaagaagttatcatataaattgtttcaaatgattgttcaaatatcac 48946024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 34628042 - 34628014
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  34628042 tgtttttgaccaatgaaaagagagaaaaa 34628014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36799502 - 36799530
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  36799502 tgtttttgaccaatgaaaagagagaaaaa 36799530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 39540341 - 39540381
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaa 43  Q
    |||||||||||||||||||||||||||| | ||| ||||||    
T  39540341 tttttgaccaatgaaaagagagaaaaaataaattatcacaa 39540381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 41717367 - 41717395
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  41717367 tgtttttgaccaatgaaaagagagaaaaa 41717395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44127159 - 44127083
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatcacta 76  Q
    ||||||| |||||||| |||||||||||| ||  |||||| || |||||||  ||||||  ||||||||||||||||    
T  44127159 tgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatcacta 44127083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 49457669 - 49457697
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  49457669 tgtttttgaccaatgaaaagagagaaaaa 49457697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 38985 - 39060
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  38985 ttttttaccaatgaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactact 39060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37856148 - 37856071
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||    
T  37856148 tgtttttgaccaatgaaaagagagaaaaaagagattatcacaaaagttgtttcaaatagatgtttaaatatcactact 37856071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48866897 - 48866820
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||||    
T  48866897 tgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactact 48866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30180611 - 30180688
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||| ||||||||||||||||||||  ||||| ||| | |||||||||||| |||||||||||||||||||    
T  30180611 tgtttttgacccatgaaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactact 30180688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37351957 - 37351880
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||| | |||||| | ||||||||||||||||||    
T  37351957 tgtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactact 37351880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5978683 - 5978760
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||| ||| ||   ||||||||||||||||||    
T  5978683 tgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactact 5978760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21752762 - 21752839
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||   |||||||||| |||||||    
T  21752762 tgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtttcatattgttgttcaaataacactact 21752839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 32933653 - 32933724
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||||| |||| ||| |||||||| |||||||||| |||||| |||||||| ||||||||||||||    
T  32933653 tttttgaccaataaaaatagaaaaaaaagaaattgtcacaaaagttgtatcaaataattgttcaaatatcac 32933724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5378731 - 5378808
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| |||||| ||||| | || |||||| ||||||  ||||| |||||||||||||    
T  5378731 tgtttttgaccaatgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatatcactact 5378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12141988 - 12142065
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| |||||| ||||||   ||||||||||||||||||    
T  12141988 tgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactact 12142065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33684784 - 33684861
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||| |||||||||| |||  |||||||||| |||||||    
T  33684784 tgttttttaccaatgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaataacactact 33684861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46651776 - 46651853
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| |||  ||||||||||| |||| ||| ||   ||||||||||||||||||    
T  46651776 tgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactact 46651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 43445516 - 43445588
Alignment:
Q  6 ttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||| |||||| |||||||||| |||||||||| | |||| |||||| | ||||||||||||||||||    
T  43445516 ttgaccaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactact 43445588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6353832 - 6353910
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa-gatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||| |||||||||| || |||||||||| |||||| |||||||  | ||||||||||||||||    
T  6353832 tgtttttaaccaatgaaaaaagagaaaaaaagaaattgtcacaaaagttgtatcaaatagtttttcaaatatcactact 6353910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21839100 - 21839022
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactacta 79  Q
    ||||||| ||||||||||| |||||||||| | ||||| |||| | |||| |||||||  |||||||||||||||||||    
T  21839100 tgtttttaaccaatgaaaaaagagaaaaaataaattgttacaaaaattgtatcaaatagttgttcaaatatcactacta 21839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 34348994 - 34348917
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||| ||||||  |||| | || |||||| | ||||| |||||||||||||||||||    
T  34348994 tgttttttaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtatgaaatagatgttcaaatatcactact 34348917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39875776 - 39875735
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  39875776 tgtttttgaccaatgaaaagagagaaaaaagaaattgtcaca 39875735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44894441 - 44894364
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||| | || | ||||||  |||||||||||||||||||    
T  44894441 tgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatatcactact 44894364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8792564 - 8792490
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||| ||||||||||||||||||||   ||||||||| |||||| ||||||   ||||||||||||| ||||    
T  8792564 tgtttttgactaatgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatggttgttcaaatatcattact 8792490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2790281 - 2790359
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat-aaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  ||||||||  |||||| | |||| |  ||||||||||||||||||    
T  2790281 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactact 2790359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 7990211 - 7990257
Alignment:
Q  35 ttgtcacaagagttgtttcaaataaatgttcaaatatcactactatt 81  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  7990211 ttgtcacaacagttgtctcaaatgaatgttcaaatatcactactatt 7990257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 38995987 - 38995913
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||| ||| |||||||| |||||||||  ||||||| || || | ||||||||||||| ||||    
T  38995987 ttttgaccaatgaaaaaagaaaaaaaagaaattgtcacataagttgttacatatgattgttcaaatatcaatact 38995913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7077720 - 7077647
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| |||||||||||| ||| ||||| |  ||||||||| |||||||| |||||  ||||||||||||||    
T  7077720 tgtttttaaccaatgaaaagtgaggaaaaaaaagttgtcacaaaagttgtttaaaatagttgttcaaatatcac 7077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10591257 - 10591333
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||| | |||||||||||  ||||||||| |||||| ||||||   ||||||||||||||||||    
T  10591257 tgttttttaccaatgaaa-gtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactact 10591333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21858851 - 21858928
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||| |||||||||| || ||||||||  || |||||| |||||||| ||||   ||||||||||||||||||    
T  21858851 tgtttttgatcaatgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatatcactact 21858928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25887687 - 25887764
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||||||    
T  25887687 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 25887764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41966432 - 41966509
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| ||||  |||||||||||  |||||| || | |||||| |||||  ||||||||||||||||||    
T  41966432 tgtttttgaccaataaaaactgagaaaaaagaagttgtcataaaaattgtttaaaatagttgttcaaatatcactact 41966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45607128 - 45607205
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||| | | |||||  ||||||||||||||||||    
T  45607128 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatagttgttcaaatatcactact 45607205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 32171088 - 32171052
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtc 39  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32171088 tttttgaccaatgaaaagagagaaaaaagaaattgtc 32171052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5198727 - 5198652
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaat-aaatgttcaaatatcact 75  Q
    ||||||||||| |||||||||||||||||||| ||| |||||  |||||| | |||| |  |||||||||||||||    
T  5198727 tgtttttgaccgatgaaaagagagaaaaaagaaattatcacataagttgtctaaaatgagttgttcaaatatcact 5198652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42204693 - 42204662
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  42204693 tgtttttgaccaatgaaaagagagaaaaaaga 42204662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32315930 - 32316008
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt-ttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| | ||||||||||||  || ||||||||| ||||||  |||||||  ||||||||||||| ||||    
T  32315930 tgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 155948 - 155871
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||  ||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||||||    
T  155948 tgtttttgaccaatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactact 155871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12102676 - 12102627
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    ||||||| |||||||||||||||||||||| |  ||||||||| ||||||    
T  12102676 tgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 12102627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19510324 - 19510247
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||| |||||||||||||||||||| |  |||| |||| |||||| | | || | |||||||||| |||||||    
T  19510324 tgtttttgatcaatgaaaagagagaaaaaataagttgttacaaaagttgtcttatatgattgttcaaataacactact 19510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 34304645 - 34304616
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||    
T  34304645 tttttgaccaatgaaaagagagaaaaaaga 34304616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41077471 - 41077442
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  41077471 tgtttttgaccaatgaaaagagagaaaaaa 41077442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43025911 - 43025968
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    ||||||| |||| |||||||||||||||||||  |||| |||| |||||| |||||||    
T  43025911 tgtttttaaccattgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaata 43025968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 29034189 - 29034217
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  29034189 tgtttttgaccaatgaaaagagagaaaaa 29034217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 40717204 - 40717128
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcac-aagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||| |||||| |||||||||||||||||  ||||||| || |||||| | ||||   ||||||||||||||||||    
T  40717204 tttttaaccaataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactact 40717128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41254880 - 41254927
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    ||||||| |||||||||||||||||||||||   ||||||||| |||||||    
T  41254880 tgtttttaaccaatgaaaagagagaaaaaag---ttgtcacaaaagttgtt 41254927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3091845 - 3091922
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||| |||||||| ||||||||||||||||||    
T  3091845 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactact 3091922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39454214 - 39454137
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| |||||||||||||||||||    
T  39454214 tgtttttgaccaatgaaaagagagaaaaaagagattgtctcaaaacttgtttcaaatagatgttcaaatatcactact 39454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14140306 - 14140229
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||| | ||||||||||||||||||    
T  14140306 tgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatatcactact 14140229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23344956 - 23344879
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  |||||| ||||||||| |||||| ||||||||||||||||||||    
T  23344956 tgtttttgaccaatgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactact 23344879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29795540 - 29795617
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||||||||||  |||||||||||||||||||    
T  29795540 tgtttttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatcactact 29795617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22390256 - 22390333
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||||  ||||||||||||| |||||    
T  22390256 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatctctact 22390333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36435785 - 36435857
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    ||||||| | ||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||    
T  36435785 tgttttttatcaatgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaataaatgttcaaatatca 36435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6365290 - 6365364
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    |||||||||||||| |||||||||||||||||  |||||| || |||||||| ||||| ||||||||||||||||    
T  6365290 tgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgttttaaatagatgttcaaatatcact 6365364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2013252 - 2013175
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||| ||||||  ||||| |||||||||||||    
T  2013252 tgtttttgaccaatgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcactact 2013175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11164343 - 11164270
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| |||||| |||||||  ||||||||||||||    
T  11164343 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcac 11164270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34442217 - 34442294
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| |||||||||| ||||||  |||||| || | |||||||||||| |||||||||||||||||||    
T  34442217 tgtttttgaccaataaaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatatcactact 34442294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 42251884 - 42251810
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||  ||||||||  ||||||| ||||| | |||| |||||||||||||    
T  42251884 ttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactact 42251810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44189931 - 44190006
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||| |||||||||||||||||||||||  ||| |||||||||||||||| || |||  |||||||||||||||||||    
T  44189931 tgttcttgaccaatgaaaagagagaaaa--gatgttgtcacaagagttgtctcgaatggatgttcaaatatcactact 44190006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13711165 - 13711242
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| ||||||   |||||  ||||||||||||||||||    
T  13711165 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactact 13711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14714090 - 14714167
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||| | |||| ||||||  |||||||||||||||||||    
T  14714090 tgtttttgatcaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactact 14714167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 36133086 - 36133155
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||  ||||||||| |||||| | |||||  ||||||||||||||||||    
T  36133086 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactact 36133155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42081141 - 42081218
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| ||||||||||||  |||| | || | |||| |||||| ||||||||||||||||||||    
T  42081141 tgtttttgaccaatgaaaatagagaaaaaagaagttgttaaaaaaattgtctcaaattaatgttcaaatatcactact 42081218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 12600160 - 12600227
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||||||||||||||||||||  ||||||||| |||||| | |||||  ||||||||||||||||    
T  12600160 accaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcacta 12600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25801778 - 25801704
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||||||||||||||||||||||||||||  |  |||||| |||||| ||||||   |||||||||||||||    
T  25801778 tgtttttgaccaatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatcact 25801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 43650511 - 43650437
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||| ||||||||||||||||| |||||||||  |||||| |||||| | |||| |||||||| ||||    
T  43650511 ttttgaccaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattact 43650437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 31296807 - 31296769
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  31296807 ttttgaccaatgaaaagagagaaaaaagaaattgtcaca 31296769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36376818 - 36376744
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||||||||||||||||||||||||||||  |||| | || | || | |||| || ||||||||||||||||    
T  36376818 tgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaaattatctcaattagatgttcaaatatcact 36376744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1889251 - 1889292
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  1889251 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 1889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8555259 - 8555186
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatca 73  Q
    ||||||||| ||||||||||||||||||| ||  |||||| || |||||||  ||||||| |||||||||||||    
T  8555259 tgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatca 8555186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11229288 - 11229211
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||||||    
T  11229288 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 11229211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12962490 - 12962567
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||| |||||||||| |||||| ||||| |||| | || | |||||||  ||||||||||||||||||    
T  12962490 tgtttttaaccaattaaaagagagagaaaagaaattgttacaaaatttatatcaaatagttgttcaaatatcactact 12962567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13104583 - 13104660
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| |  ||||||||| | |||| ||| ||   |||||||||| |||||||    
T  13104583 tgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactact 13104660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32750102 - 32750179
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| |  ||||||||| | |||| ||| ||   |||||||||| |||||||    
T  32750102 tgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactact 32750179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3960000 - 3960050
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    ||||||||| ||||||||||||||||||| || ||||||| || |||||||    
T  3960000 tgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgtt 3960050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37631334 - 37631284
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    |||||||||||||||| |||||||||||||||  |||||| || |||||||    
T  37631334 tgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgtt 37631284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5455420 - 5455343
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||||| |||  | ||| |||||| | ||||   ||||||||||| ||||||    
T  5455420 tgtttttaaccaatgaaaagagagaaaaaagaaattaccccaaaagttgtataaaatggttgttcaaatattactact 5455343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7086091 - 7086014
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| |||| |  ||||||||| | |||| ||| ||   |||||||||| |||||||    
T  7086091 tgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactact 7086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 34249684 - 34249713
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  34249684 tgtttttgaccaatgaaaagagagaaaaaa 34249713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39285957 - 39286014
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    ||||||| |||||| |||| ||||||||||||  ||||||||| |||||| |||||||    
T  39285957 tgtttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaata 39286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43725309 - 43725382
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||    
T  43725309 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcac 43725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 30856911 - 30856939
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  30856911 tgtttttgaccaatgaaaagagagaaaaa 30856939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36763487 - 36763459
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  36763487 tgtttttgaccaatgaaaagagagaaaaa 36763459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28811532 - 28811607
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| || ||||||||||||||    
T  28811532 tgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatattcaaatatcacta 28811607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33567206 - 33567129
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||   |||||| |||||||||||    
T  33567206 tgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactact 33567129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 34767382 - 34767313
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatc 72  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||| ||||||| |||||||||||||    
T  34767382 tttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatagatgttcaaatatc 34767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 20719980 - 20719905
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||| ||||||  ||||||||| |||||| ||||||  |||||||||||||||||||    
T  20719980 tttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactact 20719905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 125196 - 125274
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactacta 79  Q
    ||||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||   |||||||||||||||||||    
T  125196 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactacta 125274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2117607 - 2117530
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||| ||||||||||||  ||||||||| |||||| |||||||  ||||||||||||||||||    
T  2117607 tgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactact 2117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11306800 - 11306877
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||| ||| |||||| |||||||  ||||||||||||||||||    
T  11306800 tgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactact 11306877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39595378 - 39595455
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||   ||||||||||||| ||||    
T  39595378 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattact 39595455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4834996 - 4834924
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    |||| |||||||||||||||||||| ||||||  || ||||||||||||| ||||||| ||||||||||||||    
T  4834996 tgttcttgaccaatgaaaagagagagaaaagaagttatcacaagagttgtctcaaatagatgttcaaatatca 4834924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13613931 - 13613855
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||| |||||| | |||| | ||||||||||||||||    
T  13613931 tgtttttaaccaatgaaaagagagaaaaaagaaattgtcaccaaaagttgtatgaaatgattgttcaaatatcacta 13613855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19376099 - 19376022
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||  |||||| |||  ||  |||||||||| |||||||    
T  19376099 tgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactact 19376022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 24431577 - 24431508
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| ||  ||||||||| |||||| ||||||   ||||||||||||||||||    
T  24431577 accaatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcactact 24431508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 10232606 - 10232681
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||| ||||||||||||||||||||||||  |||||| ||| |||||| | |||||  ||||||||||||||||||    
T  10232606 ttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactact 10232681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5130345 - 5130267
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcac-aagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||||  ||||||| || | |||| | |||||  ||||||||||||||||||    
T  5130345 tgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactact 5130267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9714103 - 9714025
Alignment:
Q  1 tgtttttgaccaatgaaaa-gagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| || |||||| |||  |||||||||||||||| ||| ||   ||||||||||||||||||    
T  9714103 tgtttttgaccaatgaaaaagatagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactact 9714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40566184 - 40566106
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaa-aagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| || |  |||| | || |||||| ||||||  |||||||||||||||||||    
T  40566184 tgtttttgaccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 40566106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12718347 - 12718270
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||| | |||||  ||||   ||||||||||||||||||    
T  12718347 tgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatatcactact 12718270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19127228 - 19127305
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||| ||||||||||||  |||||||||||  ||||| ||| |||||||| ||||   ||||||||||||||||||    
T  19127228 tgttttggaccaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactact 19127305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27392669 - 27392592
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||| |||||| |  ||||||||| |||||| ||| ||   |||||||||| |||||||    
T  27392669 tgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 27392592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33243708 - 33243631
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||| | |||||||||| |||| | | ||||   ||||||||||||| ||||    
T  33243708 tgtttttaaccaatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattact 33243631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34381116 - 34381189
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||||||||||||||||||||||| ||  ||||||||| | || | ||||||   ||||||||||||||    
T  34381116 tgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatcac 34381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15531858 - 15531779
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtc--acaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||||| ||||||  | || | |||| |||| | | ||||||||||||||||||    
T  15531858 tgtttttaaccaatgaaaagagagaaaaaagaaattgtcataaaaaaattgtctcaactgattgttcaaatatcactact 15531779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21749462 - 21749502
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcac 41  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  21749462 tgtttttaaccaatgaaaagagagaaaaaagaaattgtcac 21749502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11666283 - 11666314
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaaga 32  Q
    ||||||||||||||||||||||||||||||||    
T  11666283 tgtttttgaccaatgaaaagagagaaaaaaga 11666314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 12661911 - 12661840
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||| ||||||||||||||||||||||||  |||||| ||| |||||| | |||||  ||||||||||||||    
T  12661911 ttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatcac 12661840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8087903 - 8087941
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtc 39  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  8087903 tgtttttgaccaatgaaaagagagaagaaagaaattgtc 8087941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31284361 - 31284287
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||| ||||||||||||||||| ||||||  ||||| ||| |||||| | ||||   |||||||||||||||    
T  31284361 tgtttttaaccaatgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatatcact 31284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12779573 - 12779496
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||| | |||||  ||||   | ||||||||||||||||    
T  12779573 tgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttattcaaatatcactact 12779496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23991335 - 23991363
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  23991335 tgtttttgaccaatgaaaagagagaaaaa 23991363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 113729 - 113806
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| |||  ||||||||| | |||||||||||| ||||| |||||||||||||    
T  113729 tgtttttgaccaatgaaaagagagaaaagagaggttgtcacaaaaattgtttcaaatagatgtttaaatatcactact 113806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40610333 - 40610410
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  ||||||||| |||||| ||||||  |||||||||||||||||||    
T  40610333 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactact 40610410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 46948083 - 46948160
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||||||| ||||||  |||||||||||||||||||    
T  46948083 tgtttttgaccaatgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactact 46948160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 31427922 - 31427847
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||  || |||||||| ||||||| || |||||||| |||||| ||||||||||||||||||    
T  31427922 tttttgaccaatgaaaaatgaaaaaaaagaaattgtcataaaagttgtttaaaataattgttcaaatatcactact 31427847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49453584 - 49453658
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||||   ||||||||| |||||| |||||||  ||||||||||||||||||    
T  49453584 tgtttttaaccaatgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatagttgttcaaatatcactact 49453658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50061943 - 50061869
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||||| |||| |||||||||| ||||||  |||| | |||| |||||||||||||||||||||||||||||    
T  50061943 tgtttttgatcaataaaaagagagagaaaagaagttgttataagaattgtttcaaataaatgttcaaatatcact 50061869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50141902 - 50141827
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    ||||||||||||||||||||||||| |||| | |||||||||| |||||| ||| |||  |||||||||| |||||    
T  50141902 tgtttttgaccaatgaaaagagagagaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacacta 50141827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5477130 - 5477073
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    |||||||||||||| |||||||||||||||||  ||||||||| |||||| |||||||    
T  5477130 tgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaata 5477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39010918 - 39010995
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||||| |  ||||||||| |||||| ||| ||   |||||||||| |||||||    
T  39010918 tgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 39010995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45740511 - 45740434
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||  |||||||||||  |||||| || | || |||||||| | ||||||||||||||||||    
T  45740511 tgtttttgaccaatgaaaattgagaaaaaagaagttgtcataaaaattatttcaaatgattgttcaaatatcactact 45740434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50659159 - 50659082
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||| ||||||  ||||||||  |||||||||| ||   |||||||||| |||||||    
T  50659159 tgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaataacactact 50659082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14002707 - 14002631
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt-tcaaataaatgttcaaatatcactact 78  Q
    ||||| ||||||||||||||||||||| || ||||||| || |||||||  ||||||  ||||||||||||||||||    
T  14002707 tttttaaccaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatcactact 14002631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40596021 - 40595949
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    ||||||||||||||||||||||||||||||  |||||||| ||  ||||| ||||||   |||||||||||||    
T  40596021 tgtttttgaccaatgaaaagagagaaaaaaattattgtcaaaaaggttgtatcaaatggttgttcaaatatca 40595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 22389490 - 22389416
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||  ||||||   ||||||||||||| ||||    
T  22389490 tttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattact 22389416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 2362476 - 2362550
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||| ||||||||||| ||||| ||||||  ||||||||| | |||| |||||||  ||||||||||||||||||    
T  2362476 ttttaaccaatgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactact 2362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 36418185 - 36418251
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaat 69  Q
    ||||| ||||||||||||||||| ||||||  ||||||||| |||||| |||||||  |||||||||    
T  36418185 tttttaaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaat 36418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15466851 - 15466924
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    |||||||||| ||| |||||| |||||||||| |||||||||| | || ||| ||||| || ||||||||||||    
T  15466851 tgtttttgacaaataaaaagaaagaaaaaagagattgtcacaaaaattattttaaatagatattcaaatatcac 15466924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30631812 - 30631735
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||||||||||    
T  30631812 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 30631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 51703078 - 51702998
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactactatta 82  Q
    ||||||| ||||||||||||| |||||||| | ||| |||||| |||||| | ||||   ||||||||||||||||||||||    
T  51703078 tgtttttaaccaatgaaaaga-agaaaaaaaaaattatcacaaaagttgtctgaaatggttgttcaaatatcactactatta 51702998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37843399 - 37843325
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||||||||||||||   |||||||||  | || | |||||||  ||||||||||||||||||    
T  37843399 tgtttttaaccaatgaaaagagagaaaaaa---attgtcacacaaattatatcaaatagttgttcaaatatcactact 37843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7645519 - 7645444
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||||||||  ||  |||| | || | |||| ||||||  |||||||||||||||||||    
T  7645519 tgtttttgaccaatgaaaagagagaaaa--gaagttgttaaaaaaattgtctcaaatggatgttcaaatatcactact 7645444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16836081 - 16836031
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    ||||||||||||||||||||  ||||||||||  ||||||||| |||||||    
T  16836081 tgtttttgaccaatgaaaagtaagaaaaaagaagttgtcacaaaagttgtt 16836031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29294055 - 29294122
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    |||||||||||||||||||||  |||||| |||||||||  ||||||| || |||  |||||||||||||    
T  29294055 ttttgaccaatgaaaagagag--aaaagaaattgtcacataagttgttccacatagttgttcaaatatca 29294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31480102 - 31480024
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||| |  |||||| ||| | |||| | |||||  ||||||||||||||||||    
T  31480102 tgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactact 31480024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32966371 - 32966421
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtt 51  Q
    |||||||||||||| |||||||||||||| ||  ||||||||| |||||||    
T  32966371 tgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgtt 32966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35846286 - 35846208
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactacta 79  Q
    |||||||||||||||||||| |||||||||||  ||||  ||| |||||| | ||||   ||||||||||| |||||||    
T  35846286 tgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatgactacta 35846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 7503571 - 7503644
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtca-caagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||| |||||||||||||||||||||| | ||||||| ||| |||||| | ||||   |||||||||||||||    
T  7503571 tttttaaccaatgaaaagagagaaaaaaaaaattgtcaccaaaagttgtatgaaatggttgttcaaatatcact 7503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18610874 - 18610951
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||| ||||||||| |||   |  ||||||||| |||||| | || ||| ||||||||||||||||||    
T  18610874 tgtttttgaccaataaaaagagaggaaaggaaagttgtcacaaaagttgtcttaattaattgttcaaatatcactact 18610951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28253119 - 28253168
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgt 50  Q
    ||||||||||||||||||||||||| ||||||  |||| |||| ||||||    
T  28253119 tgtttttgaccaatgaaaagagagagaaaagaagttgttacaaaagttgt 28253168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29264110 - 29264179
Alignment:
Q  4 ttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatca 73  Q
    ||||||||||| |||||||||| |||||| ||| |||||  ||||||| || |||  |||||||||||||    
T  29264110 ttttgaccaataaaaagagagagaaaagaaattatcacataagttgttccacatagttgttcaaatatca 29264179  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31290175 - 31290102
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||| ||||||||||| |||||||||| |  ||||||||| |||||| | ||||   ||||||||||||||    
T  31290175 tgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatcac 31290102  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36690539 - 36690462
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| ||||| |||| |  ||||||||| |||||| ||| ||   |||||||||| |||||||    
T  36690539 tgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 36690462  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36706640 - 36706563
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||| ||||| |||| |  ||||||||| |||||| ||| ||   |||||||||| |||||||    
T  36706640 tgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 36706563  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 37690527 - 37690576
Alignment:
Q  9 accaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    ||||||||||||||||| ||||||  ||||||||| |||||| |||||||    
T  37690527 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaata 37690576  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 4604633 - 4604661
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  4604633 tgtttttgaccaatgaaaagagagaaaaa 4604661  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 16987551 - 16987579
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  16987551 tgtttttgaccaatgaaaagagagaaaaa 16987579  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 43640954 - 43640926
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  43640954 tgtttttgaccaatgaaaagagagaaaaa 43640926  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 47059857 - 47059829
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  47059857 tgtttttgaccaatgaaaagagagaaaaa 47059829  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 50528024 - 50527996
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  50528024 tgtttttgaccaatgaaaagagagaaaaa 50527996  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 51571534 - 51571603
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcac 74  Q
    ||||||||||||||||  ||||||||||||  ||||||||| |||||| | ||||   ||||||||||||||    
T  51571534 tttttgaccaatgaaa--agagaaaaaagaagttgtcacaaaagttgtattaaatggttgttcaaatatcac 51571603  T

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Target: scaffold0076 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11296 - 11353
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaata 58  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  11296 tgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 11353  T

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Target: scaffold0009 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 190852 - 190777
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcacta 76  Q
    |||||||||||||| ||||  ||||||||||| ||| |||||| | ||||||||||||||| ||||||||||||||    
T  190852 tgtttttgaccaataaaaaatgagaaaaaagaaattatcacaaaaattgtttcaaataaatattcaaatatcacta 190777  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6531 - 6602
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatc 72  Q
    ||||||||| ||||||||||||||||||||||  || |||| |||||||| ||||||  |||||||||||||    
T  6531 tgtttttgatcaatgaaaagagagaaaaaagaagttatcacgagagttgtctcaaatggatgttcaaatatc 6602  T

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Target: scaffold0508 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11503 - 11426
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||| ||||||||| | |||||  ||| |||||| | |||||  ||||||||||||||||||    
T  11503 tgtttttgaccaatgaaaagtgagaaaaaataaattgtatcaaaagttgtctaaaatagttgttcaaatatcactact 11426  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18108 - 18184
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||| |  |||||| || |||||| |||||||  ||||||||||||||||||    
T  18108 tgtttttaaccaatgaaaagagagaaaaaa-aagttgtcataaaagttgtatcaaatagttgttcaaatatcactact 18184  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9815 - 9738
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||||||||||||||||||| |||||| |  ||||||||| |||||  ||| || | |||||||||| |||||||    
T  9815 tgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgcctcatatgattgttcaaataacactact 9738  T

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Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15155 - 15079
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| ||||||||||| ||||||||| ||  ||||||||| ||||||  ||||||  ||||||||||||||||||    
T  15155 tgtttttaaccaatgaaaaaagagaaaaa-gaagttgtcacaaaagttgtaccaaatagttgttcaaatatcactact 15079  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 119937 - 120014
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcactact 78  Q
    ||||||| |||||||||||||||||||||||| |||| ||||  ||| || ||||||   |||| |||||||||||||    
T  119937 tgttttttaccaatgaaaagagagaaaaaagaaattgccacagtagtagtatcaaatggttgtttaaatatcactact 120014  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 36105 - 36183
Alignment:
Q  3 tttttgaccaatgaaaagagagaaaaaagata--ttgtcac-aagagttgtttcaaataaatgttcaaatatcactact 78  Q
    |||||||||||||||||||||||||||| | |  ||||||| || |||||| ||||||   ||||||||||||||||||    
T  36105 tttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatcactact 36183  T

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Target: scaffold0501 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10483 - 10409
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcacaagagttgtttcaaataaatgttcaaatatcact 75  Q
    ||||||||||||||||||||||||| |||| |  ||||||||| |||||| ||| ||   |||||||||| ||||    
T  10483 tgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 10409  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 219631 - 219590
Alignment:
Q  1 tgtttttgaccaatgaaaagagagaaaaaagatattgtcaca 42  Q
    ||||||||||||||||||||||||| ||||||  ||||||||    
T  219631 tgtttttgaccaatgaaaagagagagaaaagaagttgtcaca 219590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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