View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5258_low_39 (Length: 294)
Name: NF5258_low_39
Description: NF5258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5258_low_39 |
 | |
|
| [»] scaffold0004 (2 HSPs) |
| | |
|
| [»] scaffold0303 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
|
| [»] scaffold0031 (1 HSPs) |
| | |
|
| [»] scaffold0047 (1 HSPs) |
| | |
|
| [»] scaffold0882 (1 HSPs) |
| | |
|
| [»] scaffold0766 (1 HSPs) |
| | |
|
| [»] scaffold1744 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 46467904 - 46467639
Alignment:
| Q |
13 |
aatataatgttaagagcacatacttcaaatttaatggtaacataagggggaactatccttgagattttcactaaccg--cttttaaacaggataagctag |
110 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |||||| | |||||||| ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
46467904 |
aatataatgttaagagcacatacttaaaatttaatggtaacacaagggg-agctatccttaagattttcactaaccaaacttttaaacaggataaactag |
46467806 |
T |
|
| Q |
111 |
taacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaaaccttgggatcgc |
210 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
46467805 |
taacctttataaataatgagcactctccaaacaaaacaatgctttgtaggatagtctctaaaactaagagatatcacctctcttaaaaccttgagatcgc |
46467706 |
T |
|
| Q |
211 |
acccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46467705 |
acccaatacaaaagaaattacaacaataaaataatacatcaaatgtgtagatataacaaattgaagc |
46467639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 15890576 - 15890387
Alignment:
| Q |
89 |
gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacc |
188 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||| ||||||||||||| |
|
|
| T |
15890576 |
gcttttaattaggataagctagtaacctttacaaataacgagcactctccaaacaaaacagtcctttgtaaaagagtctctaaaaccaagagatatcacc |
15890477 |
T |
|
| Q |
189 |
tctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15890476 |
tctcttgaaaccttgggatcgcacccaatacaaataagaattacaacaataaaataatacaccaaatgggtagatataacaaattgaagc |
15890387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 8827282 - 8827074
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtc |
166 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||| |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| | || | |
|
|
| T |
8827282 |
ccttgagattttcactagccaagcttttaaataggagaagctagtaaactttacaaaatacgagcattctccaaacaaaaatatcttttgtagaagagcc |
8827183 |
T |
|
| Q |
167 |
tctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatataa |
266 |
Q |
| |
|
| |||| | ||||||||||||||||||| ||| ||||| ||||||| |||| | ||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8827182 |
tataaacccaagagatatcacctctcttgaaatcttggaatcgcacacaatgc-aaagaaaaaacaataataaaataatacaccaaatgtgtagatataa |
8827084 |
T |
|
| Q |
267 |
caaattgaag |
276 |
Q |
| |
|
|||||||||| |
|
|
| T |
8827083 |
caaattgaag |
8827074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 277
Target Start/End: Original strand, 353764 - 353976
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
353764 |
ccttgagattttcactaacctagcttttaaacaggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
353863 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
353864 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaatagaattacaataataaagtaatacaccaaatgtgtagatat |
353963 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
353964 |
aacaaattgaagc |
353976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 69 - 274
Target Start/End: Original strand, 113044 - 113253
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||| | ||| |
|
|
| T |
113044 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttataaataagcgagcactcttcaaacaaaacaatcctttgtagaagagt |
113143 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
|||| || | ||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
113144 |
ctcttaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaatagagttacaataataaagtaatacaccaaatgtgtagatat |
113243 |
T |
|
| Q |
265 |
aacaaattga |
274 |
Q |
| |
|
|||||||||| |
|
|
| T |
113244 |
aacaaattga |
113253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 14404623 - 14404832
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
14404623 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
14404722 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
265 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
14404723 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
14404821 |
T |
|
| Q |
266 |
acaaattgaag |
276 |
Q |
| |
|
||||||||||| |
|
|
| T |
14404822 |
acaaattgaag |
14404832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 274
Target Start/End: Original strand, 40665983 - 40666192
Alignment:
| Q |
69 |
ccttgagattttcactaaccg--cttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| |||||| |||||||||||||| ||||||| | || |
|
|
| T |
40665983 |
ccttgagattttcactaacctaacttttaaacgggataagctaataacctttacaaataagcgaacactcttcaaacaaaacaatcatttgtagaagagc |
40666082 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| | | |||||| |||||| || || ||||||||||||||||| |
|
|
| T |
40666083 |
ctctaaactcaagagatatcacctctcttgaaaccttgggatcacacccaatacaaaatagagttacaataataaagtagtataccaaatgtgtagatat |
40666182 |
T |
|
| Q |
265 |
aacaaattga |
274 |
Q |
| |
|
|| ||||||| |
|
|
| T |
40666183 |
aataaattga |
40666192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 91 - 277
Target Start/End: Complemental strand, 25685948 - 25685759
Alignment:
| Q |
91 |
ttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacct |
189 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||| ||||||| |||||||| ||| ||| ||| ||| | || ||||||| | |||||||||||||| |
|
|
| T |
25685948 |
ttttaaacaggataatctagtaacctttacaagatagcgagcacactccaaacgaaattatcctttatagaaaagcctctaaatccaagagatatcacct |
25685849 |
T |
|
| Q |
190 |
ctctttaaaccttgggatcgcacccaatacaa--aagaaattacaacaa-taaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
||||| ||| ||||||||| |||| ||| ||| |||||| ||||| || ||||| | |||||||||| |||||||| ||||||||||||| |
|
|
| T |
25685848 |
ctcttgaaatcttgggatcacaccaaatgcaaataagaaa-tacaataattaaaagattacaccaaatatgtagataaaacaaattgaagc |
25685759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 39925712 - 39925503
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
39925712 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
39925613 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
265 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
39925612 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
39925514 |
T |
|
| Q |
266 |
acaaattgaag |
276 |
Q |
| |
|
||||||||||| |
|
|
| T |
39925513 |
acaaattgaag |
39925503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 3274344 - 3274132
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
3274344 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
3274245 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3274244 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
3274145 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3274144 |
aacaaattgaagc |
3274132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 3277754 - 3277542
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
3277754 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
3277655 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3277654 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
3277555 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3277554 |
aacaaattgaagc |
3277542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 5026999 - 5027208
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| | ||||||||||||||||||||||| ||||||| | || |
|
|
| T |
5026999 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaatctttacaagatagcaagcactctccaaacaaaacaatcctttgtagaagagc |
5027098 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
265 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
5027099 |
ctctaaacctaagagatatcacctctcttgaaaccttgggatcgcacccaatataaaa-tagttataataataaaataatacaccaaatgtgtagatata |
5027197 |
T |
|
| Q |
266 |
acaaattgaag |
276 |
Q |
| |
|
||||||||||| |
|
|
| T |
5027198 |
acaaattgaag |
5027208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 39038638 - 39038426
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
39038638 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
39038539 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
39038538 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
39038439 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
39038438 |
aacaaattgaagc |
39038426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 186513 - 186565
Alignment:
| Q |
176 |
aagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaat |
228 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
186513 |
aagaaatatcacctctcttgaaactttgggatcgcacccaatacaaaagaaat |
186565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 186377 - 186458
Alignment:
| Q |
69 |
ccttgagattttcactaac--cgcttttaaacaggataagctagt-aacctttac-aaataacgagcactctccaaacaaaa |
146 |
Q |
| |
|
||||||||||||||||||| ||||||| || |||||| ||||| ||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
186377 |
ccttgagattttcactaacttagcttttatacgggataaactagtaaacctttacaaaatagcaagcactctccaaacaaaa |
186458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 16851505 - 16851293
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
16851505 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
16851406 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
16851405 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
16851306 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
16851305 |
aacaaattgaagc |
16851293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 105 - 277
Target Start/End: Complemental strand, 17365008 - 17364836
Alignment:
| Q |
105 |
agctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaaaccttgg |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
17365008 |
agctagtaacctttacaaataacgagcactctccaaacaaaacaatcatttgtagaagagtctctaaacctaagagatatcacctttctttaaaccttgg |
17364909 |
T |
|
| Q |
205 |
gatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
|| | | || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
17364908 |
gaccaccccaaatacaaaagaaattacaacaataaaatgatacagcaaatgtgtagatataacatattgaagc |
17364836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 21198540 - 21198327
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| | ||| |
|
|
| T |
21198540 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaatatgcgagcactcttcaaacaaaacaatcctttgtagaagagt |
21198441 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||| | | |||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
21198440 |
ctctaaactcaagagatatcacctctcttgaaactttgggatcgcaccctatacaaaataagagttacaataataaagtaatacaccaaatatgtagata |
21198341 |
T |
|
| Q |
264 |
taacaaattgaagc |
277 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21198340 |
taacaaattgaagc |
21198327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 69 - 276
Target Start/End: Original strand, 52986892 - 52987104
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaa-taacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| | | ||||||| | || |
|
|
| T |
52986892 |
ccttgagattttcactaacttagcttttaaacgggataagctagtaacctttacaaaatagcgagcactctccaaacaaaattaccctttgtagaagagc |
52986991 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | |||||| |||||||||||| |||| ||||||| || |||||||||||| | | || ||| |||||| |||||||||||||||||||||| |
|
|
| T |
52986992 |
ctctaaacccaagagagatcacctctcttgaaactttgggattgcgcccaatacaaaataagagttgcaataataaagtaatacaccaaatgtgtagata |
52987091 |
T |
|
| Q |
264 |
taacaaattgaag |
276 |
Q |
| |
|
||||||||||||| |
|
|
| T |
52987092 |
taacaaattgaag |
52987104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0303 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0303
Description:
Target: scaffold0303; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 21306 - 21097
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| | || |
|
|
| T |
21306 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagctagcactctccaaacaaaacaatcctttgtagaagagc |
21207 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
265 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
21206 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
21108 |
T |
|
| Q |
266 |
acaaattgaag |
276 |
Q |
| |
|
||||||||||| |
|
|
| T |
21107 |
acaaattgaag |
21097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 275
Target Start/End: Original strand, 30832 - 31043
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| | ||| |
|
|
| T |
30832 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtaaaagagt |
30931 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||| | |||||| |
|
|
| T |
30932 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatatatagata |
31031 |
T |
|
| Q |
264 |
taacaaattgaa |
275 |
Q |
| |
|
|||||||||||| |
|
|
| T |
31032 |
taacaaattgaa |
31043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 275
Target Start/End: Original strand, 20727003 - 20727214
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| | ||| |
|
|
| T |
20727003 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtaaaagagt |
20727102 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||| | |||||| |
|
|
| T |
20727103 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatatatagata |
20727202 |
T |
|
| Q |
264 |
taacaaattgaa |
275 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20727203 |
taacaaattgaa |
20727214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 277
Target Start/End: Complemental strand, 24780260 - 24780079
Alignment:
| Q |
99 |
aggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaa |
197 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| | || ||||||| ||||||||||||||||||| | |
|
|
| T |
24780260 |
aggataagctagtaacctttacaagatagcgaacactctccaaacaaaacaatcatttgtagaagagcctctaaactcaagagatatcacctctcttgat |
24780161 |
T |
|
| Q |
198 |
accttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
|| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24780160 |
actttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatgtgtagatataacaaattaaagc |
24780079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 11023572 - 11023381
Alignment:
| Q |
89 |
gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacc |
188 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||| |||| |||| || |
|
|
| T |
11023572 |
gcttttaaggaggataagctagtaacatttacaaataatgagcactcttcaaacaaaacaattctttgtaaaagagtctctaaaaccaagatatataact |
11023473 |
T |
|
| Q |
189 |
tctctttaaaccttgggat--cgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagc |
277 |
Q |
| |
|
|||||| |||||||||||| | ||||||||||||| | | |||||| || | |||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
11023472 |
tctcttgaaaccttgggatcacacacccaatacaaataagatttacaataaggatataatacatcaaatatatagatataacaaattgaagc |
11023381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 116; Significance: 5e-59; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 18677663 - 18677450
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||| | ||||||| | ||| |
|
|
| T |
18677663 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaatatttacaaataaacgagcactcttcaaacaaaacaaacctttgtagaagagt |
18677564 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
18677563 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaataagagttacaataataaagtaatacaccaaatgtgtagata |
18677464 |
T |
|
| Q |
264 |
taacaaattgaagc |
277 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18677463 |
taacaaattgaagc |
18677450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 12352623 - 12352414
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||||||||||| |||| || ||| |
|
|
| T |
12352623 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacatt-acaaataagcgagcactcttcaaacaaaacaatcctttgaag---agt |
12352528 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| |||||||| |||||||||||||| | | | |||| |||||| |||||||||||||||||||||| |
|
|
| T |
12352527 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaataagagtaacaataataaagtaatacaccaaatgtgtagata |
12352428 |
T |
|
| Q |
264 |
taacaaattgaagc |
277 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
12352427 |
taacaagttgaagc |
12352414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 70 - 277
Target Start/End: Complemental strand, 14859282 - 14859079
Alignment:
| Q |
70 |
cttgagattttcactaaccg--cttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagtc |
166 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||| |||||||||| ||||||||||||| | || |||| |
|
|
| T |
14859282 |
cttgagattttcactaacctaacttttaaacgggataag----taacctttgcaaataaacgagcactcttcaaacaaaacaat-----gaagatgagtc |
14859192 |
T |
|
| Q |
167 |
tctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
|||||| | ||||||||||||||||||| |||| | |||||| |||||||||||||| | | |||||| |||||| || ||||||||| ||||||||| |
|
|
| T |
14859191 |
tctaaacccaagagatatcacctctcttgaaacttagggatcacacccaatacaaaataagagttacaataataaagaaagacaccaaatatgtagatat |
14859092 |
T |
|
| Q |
265 |
aacaaattgaagc |
277 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14859091 |
aacaaattgaagc |
14859079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 24170526 - 24170367
Alignment:
| Q |
69 |
ccttgagattttcactaaccg--cttttaaacaggataagcta--gtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggata |
163 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||| | ||||||| |||||||||| ||| ||| ||| | | |
|
|
| T |
24170526 |
ccttgagattttcactaaccaaacttttaaacaagataaactatagtaacctttacaagatagctagcactccccaaacaaaattatcctttatagaaga |
24170427 |
T |
|
| Q |
164 |
gtctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaa |
223 |
Q |
| |
|
|| |||| | |||| ||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
24170426 |
acctttaaacccaagatatatcacctcttttgaaaccttaggatcgcacctaatacaaaa |
24170367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 116; Significance: 5e-59; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 37439909 - 37439696
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||| | ||| |
|
|
| T |
37439909 |
ccttgagattttcactaacctagcttttaaacaggataagctagtaacctttacaaataagcgagcactcttcaaacaaaataatcctttgtagaagagt |
37439810 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
263 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||| |||||||||||| |||||||||| | | |||||| |||||| ||||||||||||||||||||| |
|
|
| T |
37439809 |
ctctaaacccaagagatatcacctctcttgaaaatttgggatcgcacacaatacaaaataagagttacaataataaagcaatacaccaaatgtgtagata |
37439710 |
T |
|
| Q |
264 |
taacaaattgaagc |
277 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
37439709 |
taacaaattcaagc |
37439696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 54001424 - 54001610
Alignment:
| Q |
90 |
cttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacct |
189 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| | | | |||||||| |||||||||||| | |
|
|
| T |
54001424 |
cttttaaataggataagctaataacctttccaaataacgagcattctccaaacaaaacaatcatttgtagaagactttctaaaaccaagagatatcacat |
54001523 |
T |
|
| Q |
190 |
ctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaa--taaaataatacaccaaatgtgtagatataacaaattgaa |
275 |
Q |
| |
|
||| | ||||||| ||||||||||||||| ||| ||| || ||||| |||| | |||||||||| |||||||||||||||||||| |
|
|
| T |
54001524 |
ctcatggaaccttgagatcgcacccaataccaaataaa-tataacaatttaaatgattacaccaaatatgtagatataacaaattgaa |
54001610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 39072738 - 39072789
Alignment:
| Q |
171 |
aaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa |
222 |
Q |
| |
|
|||| |||||||||||||||| || |||| ||||||||||| |||||||||| |
|
|
| T |
39072738 |
aaaccaagagatatcacctcttttgaaactttgggatcgcatccaatacaaa |
39072789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 269
Target Start/End: Original strand, 89161 - 89363
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| | || |
|
|
| T |
89161 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacgatcctttgtagaagagc |
89260 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
265 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
89261 |
ctctaaacccaagagatatcacctctcttgaaaccttgggattgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatatt |
89359 |
T |
|
| Q |
266 |
acaa |
269 |
Q |
| |
|
|||| |
|
|
| T |
89360 |
acaa |
89363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 9295 - 9084
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| | || |
|
|
| T |
9295 |
ccttgagattttcattaacctagcttttaatcgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtagaagagc |
9196 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
||||||| | || ||||||| |||||||| ||||||||||| | |||||||||||||| | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
9195 |
ctctaaacccaaaagatatcgcctctcttaaaaccttgggaacacacccaatacaaaatagagttacaataataaagtaatacaccaaatgtgtagatat |
9096 |
T |
|
| Q |
265 |
aacaaattgaag |
276 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9095 |
aacaaattgaag |
9084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0882 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0882
Description:
Target: scaffold0882; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 274
Target Start/End: Original strand, 221 - 430
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||| ||||||| | || |
|
|
| T |
221 |
ccttgagattttcattaacctagcttttaaacgggataagccagtaacctttacaaataaacaagcactcttcaaacaaaacaatcctttgtagaagagc |
320 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
|||||| | |||||||||||| |||||| |||||||| |||| |||||||||||| | | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
321 |
ttctaaacccaagagatatcacatctcttgaaaccttgagatcacacccaatacaagatagagttacaataataaagtaatacaccaaatgtgtagatat |
420 |
T |
|
| Q |
265 |
aacaaattga |
274 |
Q |
| |
|
|||||||||| |
|
|
| T |
421 |
aacaaattga |
430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0766 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0766
Description:
Target: scaffold0766; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 274
Target Start/End: Complemental strand, 3182 - 2973
Alignment:
| Q |
69 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
165 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||| ||||||| | || |
|
|
| T |
3182 |
ccttgagattttcattaacctagcttttaaacgggataagccagtaacctttacaaataaacaagcactcttcaaacaaaacaatcctttgtagaagagc |
3083 |
T |
|
| Q |
166 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
264 |
Q |
| |
|
|||||| | |||||||||||| |||||| |||||||| |||| |||||||||||| | | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3082 |
ttctaaacccaagagatatcacatctcttgaaaccttgagatcacacccaatacaagatagagttacaataataaagtaatacaccaaatgtgtagatat |
2983 |
T |
|
| Q |
265 |
aacaaattga |
274 |
Q |
| |
|
|||||||||| |
|
|
| T |
2982 |
aacaaattga |
2973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1744 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold1744
Description:
Target: scaffold1744; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 228
Target Start/End: Original strand, 268 - 432
Alignment:
| Q |
69 |
ccttgagattttcactaac--cgc-ttttaaacaggataagctagtaacctttacaaa--taacgagcactctccaaacaaaacaatcttttgtaggata |
163 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||||||||||||| || |||||||||||||||||||| | | ||||||| | | |
|
|
| T |
268 |
ccttgagattttcactaacttagctttttaaacgggataagctagtaacctttacaaaattagcgagcactctccaaacaaaattaccctttgtagaaga |
367 |
T |
|
| Q |
164 |
gtctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaat |
228 |
Q |
| |
|
| ||||||| ||||||||||||||||||| |||| |||||||| ||||||| ||||||||||| |
|
|
| T |
368 |
gcctctaaactcaagagatatcacctctcttgaaactttgggatcacacccaacacaaaagaaat |
432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University