View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5260-Insertion-4 (Length: 270)
Name: NF5260-Insertion-4
Description: NF5260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5260-Insertion-4 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 237
Target Start/End: Complemental strand, 32360097 - 32359866
Alignment:
| Q |
7 |
accctcttcaatcaactcaacgccaagttcgaagaattcttctcccatctccctctacaccattatgagaatctctctgggccccttccgcctccggatt |
106 |
Q |
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| T |
32360097 |
accctcttcaatcaactcaacgccaagttcgaagaattcttctcccatctccctctacaccatcatgagaatctctctgggccccttccgcctccggatt |
32359998 |
T |
|
| Q |
107 |
cacggttgtctccacttgttgaacatctttctctcatacttcgccgctctctggttgttctgacacttcccttttccga-caggaattcctcatcaacaa |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32359997 |
cacggttgtctccacttgttgaacatctttctctcatacttcgccgctctctggttgttctgacacttcccttttccgaccaggaattcctcatcaacaa |
32359898 |
T |
|
| Q |
206 |
atgccgcttcattctcagcattctcaaatcct |
237 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
32359897 |
atgccgcttcattctcagcattctcaaatcct |
32359866 |
T |
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