View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5260_low_2 (Length: 586)

Name: NF5260_low_2
Description: NF5260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5260_low_2
NF5260_low_2
[»] scaffold0291 (1 HSPs)
scaffold0291 (393-570)||(7883-8060)
[»] chr7 (46 HSPs)
chr7 (394-579)||(30055498-30055684)
chr7 (395-570)||(18797302-18797475)
chr7 (397-570)||(37109847-37110020)
chr7 (395-570)||(17842599-17842774)
chr7 (397-570)||(27283719-27283892)
chr7 (393-570)||(38258516-38258693)
chr7 (396-570)||(31579077-31579256)
chr7 (397-570)||(7334769-7334942)
chr7 (398-568)||(24211717-24211887)
chr7 (397-576)||(5657488-5657667)
chr7 (397-568)||(37346997-37347168)
chr7 (394-567)||(12390646-12390819)
chr7 (395-568)||(10481576-10481751)
chr7 (391-570)||(21991605-21991784)
chr7 (390-568)||(31520739-31520916)
chr7 (395-570)||(32821066-32821241)
chr7 (398-568)||(33688277-33688446)
chr7 (399-568)||(44413394-44413564)
chr7 (399-567)||(23111167-23111335)
chr7 (422-570)||(29173540-29173688)
chr7 (398-570)||(48928577-48928748)
chr7 (411-570)||(22687228-22687387)
chr7 (399-570)||(27421393-27421563)
chr7 (395-566)||(41765095-41765266)
chr7 (396-570)||(43686015-43686188)
chr7 (397-576)||(4582894-4583073)
chr7 (395-570)||(9355839-9356014)
chr7 (392-570)||(8861255-8861433)
chr7 (397-570)||(6546494-6546667)
chr7 (397-570)||(15612772-15612944)
chr7 (424-567)||(26980325-26980468)
chr7 (396-570)||(32432431-32432600)
chr7 (421-570)||(48928310-48928458)
chr7 (399-570)||(11071182-11071354)
chr7 (395-546)||(26524364-26524515)
chr7 (397-567)||(12165727-12165897)
chr7 (399-570)||(25691557-25691729)
chr7 (437-568)||(38053501-38053624)
chr7 (397-568)||(10359229-10359400)
chr7 (397-570)||(37704143-37704305)
chr7 (515-570)||(15672775-15672830)
chr7 (397-527)||(34362205-34362334)
chr7 (501-567)||(44598745-44598811)
chr7 (487-568)||(43925167-43925247)
chr7 (444-568)||(32593204-32593327)
chr7 (530-568)||(37703513-37703551)
[»] chr4 (54 HSPs)
chr4 (397-579)||(19089482-19089664)
chr4 (396-579)||(37663770-37663951)
chr4 (387-570)||(25701095-25701278)
chr4 (396-570)||(25184112-25184286)
chr4 (396-570)||(879586-879760)
chr4 (395-570)||(55477929-55478108)
chr4 (395-568)||(34361532-34361704)
chr4 (397-568)||(19440688-19440860)
chr4 (396-568)||(42199728-42199900)
chr4 (399-570)||(34948135-34948306)
chr4 (395-568)||(32912620-32912793)
chr4 (399-570)||(17173292-17173463)
chr4 (397-570)||(28003024-28003197)
chr4 (387-567)||(29584241-29584419)
chr4 (399-568)||(36493728-36493897)
chr4 (399-570)||(17167715-17167886)
chr4 (394-570)||(50764732-50764903)
chr4 (393-570)||(50697238-50697414)
chr4 (399-567)||(27396618-27396786)
chr4 (388-570)||(4597984-4598165)
chr4 (395-570)||(9139245-9139418)
chr4 (394-570)||(35021073-35021249)
chr4 (439-568)||(23761114-23761243)
chr4 (394-567)||(38011851-38012024)
chr4 (397-567)||(49375966-49376137)
chr4 (400-568)||(6864038-6864206)
chr4 (400-570)||(32592096-32592266)
chr4 (386-568)||(3042600-3042790)
chr4 (397-570)||(39397918-39398082)
chr4 (422-565)||(54499281-54499425)
chr4 (435-570)||(46888195-46888330)
chr4 (397-568)||(55241145-55241315)
chr4 (458-567)||(4934243-4934353)
chr4 (411-570)||(5048003-5048162)
chr4 (392-570)||(32579439-32579619)
chr4 (396-525)||(37287732-37287862)
chr4 (398-567)||(37775670-37775837)
chr4 (399-570)||(47253751-47253913)
chr4 (397-567)||(7703517-7703679)
chr4 (392-570)||(30002670-30002840)
chr4 (399-570)||(33341397-33341571)
chr4 (394-499)||(4205113-4205218)
chr4 (395-481)||(4396324-4396410)
chr4 (399-570)||(33816571-33816742)
chr4 (505-570)||(1815409-1815474)
chr4 (397-481)||(53124287-53124371)
chr4 (396-527)||(35025669-35025800)
chr4 (399-455)||(52516599-52516655)
chr4 (395-461)||(17272009-17272075)
chr4 (517-567)||(17272084-17272134)
chr4 (395-479)||(7152235-7152319)
chr4 (403-445)||(52195645-52195687)
chr4 (438-486)||(23518425-23518473)
chr4 (397-445)||(52102915-52102963)
[»] chr1 (53 HSPs)
chr1 (387-570)||(32267020-32267203)
chr1 (395-570)||(15382927-15383102)
chr1 (407-568)||(28564790-28564951)
chr1 (398-568)||(10922724-10922894)
chr1 (396-570)||(18422646-18422820)
chr1 (396-570)||(30254419-30254592)
chr1 (399-570)||(15752027-15752198)
chr1 (394-570)||(37618899-37619079)
chr1 (396-570)||(2959743-2959917)
chr1 (423-568)||(9903063-9903208)
chr1 (396-568)||(19899778-19899950)
chr1 (395-570)||(16415639-16415815)
chr1 (394-569)||(34012385-34012560)
chr1 (397-575)||(38823210-38823388)
chr1 (394-576)||(48620630-48620812)
chr1 (397-570)||(30326959-30327132)
chr1 (407-568)||(37451292-37451452)
chr1 (397-568)||(23999343-23999514)
chr1 (437-568)||(51128895-51129026)
chr1 (386-568)||(27763320-27763500)
chr1 (399-568)||(28769651-28769819)
chr1 (397-570)||(42721035-42721208)
chr1 (410-570)||(4330288-4330450)
chr1 (397-570)||(7079070-7079254)
chr1 (394-568)||(11742360-11742533)
chr1 (395-570)||(8222125-8222297)
chr1 (399-576)||(41926161-41926338)
chr1 (397-565)||(3309144-3309311)
chr1 (403-570)||(47279191-47279358)
chr1 (396-570)||(10182015-10182189)
chr1 (399-568)||(46931406-46931578)
chr1 (398-570)||(14758038-14758210)
chr1 (397-564)||(27267212-27267376)
chr1 (393-565)||(39393375-39393547)
chr1 (437-570)||(32216091-32216224)
chr1 (413-570)||(27532988-27533144)
chr1 (397-570)||(31621560-31621733)
chr1 (397-567)||(47682504-47682673)
chr1 (399-570)||(27563912-27564084)
chr1 (397-570)||(27227492-27227657)
chr1 (394-576)||(1547280-1547454)
chr1 (437-570)||(3534968-3535101)
chr1 (396-496)||(30254853-30254952)
chr1 (392-567)||(238523-238697)
chr1 (393-570)||(15168081-15168265)
chr1 (437-570)||(40884849-40884982)
chr1 (484-570)||(25160715-25160801)
chr1 (399-566)||(33725611-33725778)
chr1 (397-545)||(21289661-21289816)
chr1 (392-461)||(22170745-22170814)
chr1 (496-570)||(22170806-22170880)
chr1 (390-430)||(4964062-4964102)
chr1 (520-568)||(38759652-38759700)
[»] chr8 (41 HSPs)
chr8 (396-570)||(1150123-1150297)
chr8 (397-570)||(10555220-10555393)
chr8 (395-570)||(43643613-43643788)
chr8 (406-570)||(37970537-37970701)
chr8 (396-568)||(27082858-27083030)
chr8 (393-569)||(34894962-34895138)
chr8 (394-568)||(1204923-1205097)
chr8 (396-570)||(16446893-16447067)
chr8 (396-566)||(30654605-30654775)
chr8 (395-570)||(36694984-36695159)
chr8 (410-568)||(31933906-31934064)
chr8 (390-570)||(6098536-6098716)
chr8 (409-568)||(23854451-23854610)
chr8 (395-570)||(38643975-38644150)
chr8 (397-575)||(13307622-13307800)
chr8 (399-568)||(465843-466012)
chr8 (397-570)||(12876108-12876281)
chr8 (397-569)||(5299965-5300137)
chr8 (395-570)||(16222860-16223035)
chr8 (411-570)||(11727037-11727196)
chr8 (458-568)||(1149652-1149762)
chr8 (394-570)||(9864144-9864320)
chr8 (396-576)||(34952043-34952223)
chr8 (397-568)||(41362517-41362685)
chr8 (397-565)||(44869495-44869664)
chr8 (486-576)||(35459723-35459813)
chr8 (396-568)||(8803837-8803998)
chr8 (395-576)||(40862416-40862597)
chr8 (399-568)||(7890977-7891137)
chr8 (397-568)||(33906223-33906382)
chr8 (393-568)||(39099139-39099304)
chr8 (397-461)||(15009241-15009305)
chr8 (424-570)||(41911006-41911153)
chr8 (395-481)||(24823379-24823465)
chr8 (523-567)||(4132706-4132750)
chr8 (437-570)||(43025741-43025874)
chr8 (515-565)||(7998411-7998461)
chr8 (397-450)||(4133146-4133199)
chr8 (388-445)||(34685728-34685785)
chr8 (501-568)||(1954009-1954077)
chr8 (385-433)||(4108924-4108972)
[»] chr3 (62 HSPs)
chr3 (396-570)||(3655214-3655388)
chr3 (397-570)||(37203058-37203231)
chr3 (396-570)||(26941272-26941446)
chr3 (397-570)||(20373308-20373481)
chr3 (397-570)||(37157699-37157871)
chr3 (394-567)||(47481510-47481683)
chr3 (396-568)||(40552273-40552445)
chr3 (443-579)||(42506078-42506214)
chr3 (397-570)||(51212993-51213166)
chr3 (395-570)||(48354930-48355105)
chr3 (390-568)||(21009816-21009997)
chr3 (390-565)||(35844310-35844485)
chr3 (396-570)||(52040934-52041109)
chr3 (395-570)||(4761661-4761838)
chr3 (397-570)||(4015451-4015624)
chr3 (396-570)||(11466814-11466988)
chr3 (380-570)||(54828713-54828902)
chr3 (396-570)||(7327494-7327669)
chr3 (412-570)||(11357376-11357535)
chr3 (407-568)||(29099356-29099517)
chr3 (399-568)||(43975902-43976068)
chr3 (397-568)||(54505799-54505969)
chr3 (396-570)||(44186513-44186687)
chr3 (385-570)||(53229164-53229350)
chr3 (397-570)||(27480391-27480564)
chr3 (395-566)||(22450957-22451128)
chr3 (395-570)||(39282642-39282816)
chr3 (399-570)||(46297774-46297945)
chr3 (394-570)||(33378797-33378970)
chr3 (394-570)||(34132923-34133099)
chr3 (395-570)||(21193595-21193770)
chr3 (410-569)||(40935995-40936154)
chr3 (397-565)||(45174494-45174664)
chr3 (437-570)||(2007964-2008097)
chr3 (390-570)||(46994673-46994842)
chr3 (399-570)||(24708127-24708295)
chr3 (400-570)||(22446076-22446247)
chr3 (425-569)||(53176074-53176217)
chr3 (393-570)||(32373459-32373634)
chr3 (437-570)||(3362284-3362419)
chr3 (397-570)||(44891498-44891661)
chr3 (437-568)||(24488976-24489107)
chr3 (439-570)||(38591727-38591862)
chr3 (398-570)||(25579731-25579903)
chr3 (468-570)||(43348320-43348421)
chr3 (501-570)||(29163913-29163982)
chr3 (518-570)||(33698265-33698317)
chr3 (517-570)||(14586682-14586735)
chr3 (520-568)||(22622732-22622780)
chr3 (393-461)||(55343405-55343473)
chr3 (389-432)||(53175706-53175749)
chr3 (440-481)||(41585408-41585449)
chr3 (515-570)||(11835639-11835695)
chr3 (437-481)||(33698219-33698263)
chr3 (423-478)||(2613907-2613962)
chr3 (390-445)||(19606914-19606969)
chr3 (514-565)||(36012245-36012296)
chr3 (394-445)||(47870211-47870262)
chr3 (398-492)||(11835701-11835790)
chr3 (515-549)||(53811695-53811729)
chr3 (398-454)||(29163839-29163895)
chr3 (393-445)||(42665541-42665593)
[»] chr5 (58 HSPs)
chr5 (393-570)||(24886098-24886277)
chr5 (399-568)||(699152-699321)
chr5 (394-570)||(22974084-22974260)
chr5 (386-568)||(31705616-31705797)
chr5 (395-568)||(38528241-38528413)
chr5 (393-570)||(14919530-14919708)
chr5 (388-570)||(22980784-22980966)
chr5 (395-568)||(5112317-5112490)
chr5 (437-576)||(30969320-30969459)
chr5 (396-570)||(9200232-9200406)
chr5 (394-565)||(8741893-8742065)
chr5 (395-566)||(22255179-22255351)
chr5 (397-569)||(35511480-35511652)
chr5 (396-570)||(1429147-1429321)
chr5 (397-567)||(15724490-15724658)
chr5 (409-570)||(27318489-27318650)
chr5 (397-570)||(31786648-31786821)
chr5 (395-570)||(12910348-12910528)
chr5 (394-570)||(19119856-19120032)
chr5 (398-570)||(32563150-32563322)
chr5 (397-568)||(7693230-7693401)
chr5 (397-570)||(23116224-23116397)
chr5 (395-567)||(27330304-27330474)
chr5 (399-570)||(5837557-5837728)
chr5 (397-570)||(22019632-22019805)
chr5 (399-570)||(7208866-7209037)
chr5 (395-567)||(35826489-35826660)
chr5 (395-570)||(36860421-36860596)
chr5 (397-567)||(14409332-14409501)
chr5 (391-568)||(17158035-17158214)
chr5 (396-570)||(39572818-39572992)
chr5 (405-568)||(43308656-43308819)
chr5 (463-570)||(35504431-35504538)
chr5 (410-568)||(26268087-26268245)
chr5 (390-567)||(8466738-8466914)
chr5 (397-570)||(36866762-36866935)
chr5 (399-570)||(25500928-25501099)
chr5 (397-570)||(40133385-40133558)
chr5 (409-568)||(33908245-33908404)
chr5 (437-567)||(28416532-28416662)
chr5 (476-567)||(15992545-15992636)
chr5 (454-568)||(6824483-6824599)
chr5 (468-570)||(23954791-23954894)
chr5 (396-565)||(35933901-35934063)
chr5 (468-570)||(21088768-21088870)
chr5 (410-570)||(8436979-8437138)
chr5 (397-568)||(5829897-5830063)
chr5 (439-568)||(42342775-42342902)
chr5 (395-492)||(13956425-13956522)
chr5 (437-552)||(25668690-25668804)
chr5 (397-481)||(26317775-26317859)
chr5 (430-481)||(22255608-22255659)
chr5 (399-534)||(11898004-11898139)
chr5 (519-567)||(13956367-13956415)
chr5 (398-445)||(21320752-21320799)
chr5 (397-474)||(16004474-16004552)
chr5 (440-481)||(5748478-5748519)
chr5 (384-433)||(12081285-12081334)
[»] chr2 (48 HSPs)
chr2 (397-570)||(33551016-33551189)
chr2 (397-570)||(37905709-37905881)
chr2 (428-568)||(43648277-43648416)
chr2 (394-570)||(19289353-19289524)
chr2 (396-570)||(17071767-17071941)
chr2 (396-568)||(11366413-11366585)
chr2 (397-570)||(26357577-26357750)
chr2 (396-568)||(19424660-19424832)
chr2 (396-570)||(17054126-17054300)
chr2 (399-568)||(3176941-3177110)
chr2 (395-570)||(29242168-29242343)
chr2 (396-570)||(4264107-4264281)
chr2 (399-565)||(36641988-36642154)
chr2 (395-567)||(39167396-39167568)
chr2 (394-570)||(2325408-2325576)
chr2 (399-570)||(43770869-43771039)
chr2 (398-568)||(13711465-13711635)
chr2 (396-569)||(27349970-27350143)
chr2 (397-565)||(4478368-4478537)
chr2 (395-568)||(31570766-31570939)
chr2 (399-568)||(41463882-41464051)
chr2 (397-567)||(4763628-4763801)
chr2 (399-570)||(33660398-33660569)
chr2 (395-570)||(4166920-4167095)
chr2 (397-570)||(33902068-33902239)
chr2 (397-566)||(19313852-19314020)
chr2 (397-509)||(35958909-35959021)
chr2 (437-570)||(33709262-33709395)
chr2 (397-568)||(44913662-44913834)
chr2 (494-570)||(45327817-45327893)
chr2 (396-564)||(5881533-5881706)
chr2 (496-570)||(41960939-41961013)
chr2 (394-570)||(18494310-18494474)
chr2 (501-566)||(31861956-31862021)
chr2 (399-567)||(44285951-44286119)
chr2 (395-461)||(41960881-41960947)
chr2 (468-568)||(7006953-7007053)
chr2 (397-479)||(41465509-41465591)
chr2 (516-576)||(19501764-19501823)
chr2 (397-463)||(31861895-31861961)
chr2 (397-445)||(18514771-18514819)
chr2 (396-432)||(39788590-39788626)
chr2 (397-432)||(22963400-22963435)
chr2 (397-432)||(22998042-22998077)
chr2 (424-542)||(41051263-41051382)
chr2 (391-445)||(19093407-19093461)
chr2 (523-564)||(35959023-35959064)
chr2 (396-444)||(43446463-43446511)
[»] chr6 (18 HSPs)
chr6 (394-565)||(4318839-4319010)
chr6 (395-568)||(1945831-1946005)
chr6 (395-568)||(5627389-5627562)
chr6 (396-568)||(7055228-7055400)
chr6 (397-570)||(7235046-7235218)
chr6 (390-570)||(29182156-29182336)
chr6 (396-565)||(8513232-8513401)
chr6 (397-570)||(33893014-33893186)
chr6 (396-570)||(3879950-3880124)
chr6 (413-570)||(15491631-15491788)
chr6 (399-565)||(6088910-6089076)
chr6 (399-568)||(30353371-30353540)
chr6 (423-570)||(21017123-21017270)
chr6 (451-568)||(6091196-6091313)
chr6 (437-570)||(33618874-33619007)
chr6 (398-576)||(20768087-20768261)
chr6 (394-528)||(18498430-18498565)
chr6 (395-445)||(19631747-19631797)
[»] scaffold0061 (1 HSPs)
scaffold0061 (399-568)||(43959-44128)
[»] scaffold0017 (1 HSPs)
scaffold0017 (399-568)||(154659-154828)
[»] scaffold0022 (1 HSPs)
scaffold0022 (399-568)||(146030-146199)
[»] scaffold0002 (4 HSPs)
scaffold0002 (423-567)||(94398-94542)
scaffold0002 (396-570)||(133-307)
scaffold0002 (451-570)||(408441-408559)
scaffold0002 (395-449)||(408702-408756)
[»] scaffold0318 (1 HSPs)
scaffold0318 (399-570)||(11908-12082)
[»] scaffold0008 (1 HSPs)
scaffold0008 (445-570)||(267331-267457)
[»] scaffold0009 (2 HSPs)
scaffold0009 (396-481)||(42347-42432)
scaffold0009 (394-461)||(100818-100885)


Alignment Details
Target: scaffold0291 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 7883 - 8060
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7883 taaagaaaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtaca 7982  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7983 atgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 8060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 394 - 579
Target Start/End: Original strand, 30055498 - 30055684
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    ||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  30055498 aaaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtaca 30055597  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttgcta 579  Q
    ||||||| ||||||||| || |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtatcattaattcatcagattaacaagactacacttaatctaattttatcctaccttgcta 30055684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 18797302 - 18797475
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||    
T  18797302 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacacta--acataaaaaatgtaatgagtaacaccccactgtttgtacaat 18797399  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18797400 gacatcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 18797475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 37109847 - 37110020
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 37109946  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  37109947 catcaaaagttcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcct 37110020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 17842774 - 17842599
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||    
T  17842774 aaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaat 17842675  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||| ||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  17842674 gacatcaaaagctcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcct 17842599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 27283719 - 27283892
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatga 27283818  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     || ||||||||| || ||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  27283819 aatcaaaagttcagtcctcatagtattatcaatttatcagattaacaagactatacttaatctaattttatcct 27283892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 38258516 - 38258693
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||| ||||||| || |||||||| |||| ||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||| ||  |||||||||    
T  38258516 taaaagaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtaca 38258615  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  38258616 atgacatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 38258693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 31579256 - 31579077
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttg-----ta 490  Q
    ||||||||| ||||||||||| |||||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||||      ||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttata 31579157  T
Q  491 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31579156 caatgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 31579077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 7334769 - 7334942
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || ||||||||  | ||||||||||||| |||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| |  ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  7334869 catcaaaagttcagttctcatagtatcatcaactcatcagcttaacaagactacacttaatctaattttatcct 7334942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 398 - 568
Target Start/End: Original strand, 24211717 - 24211887
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | ||||| || |||| |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  24211817 atcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 24211887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 397 - 576
Target Start/End: Complemental strand, 5657667 - 5657488
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||||||||||||||||||| |||  |||||||||||||| |||||||||| ||     
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 5657568  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||| | |||||||||| |||||||||||| |||||    
T  5657567 catcaaaagttcagtcttcatagtatcatcaattcatcatattaacaaaaatacacttaatttaattttatcctactttg 5657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 37346997 - 37347168
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||||||||||||||| || | ||||| ||||| | ||||||||| |||||| |||||||| | ||||||||||||||||| |||||||||| |||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtga 37347096  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| ||||||||| || ||||||||||||||||| || | ||||||| ||||||||||||||||||||||||    
T  37347097 catcaaaagttcagtcctcatagtatcatcaatttattaaattaacaggactacacttaatctaattttatc 37347168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 12390819 - 12390646
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || |||  |||||||| | ||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||     
T  12390819 aaaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcag 12390720  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||| |||||||   ||  |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12390719 tgacatcaaaagttatgtccccatagtattatcaattcatcagattaacaagactacacttaatctaattttat 12390646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 10481576 - 10481751
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtaca 492  Q
    |||||||||| |||||| ||||||  |||||||||||||  | |||||||||||||||||||| |||| | |||||||||||||||| | ||||||||||    
T  10481576 aaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtaca 10481675  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||||| |||| |||| || | |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10481676 atgacatcaaaaattcagtctttatagtatcatcaattcatcagattaacaagactacgcttaatctaattttatc 10481751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 391 - 570
Target Start/End: Original strand, 21991605 - 21991784
Alignment:
Q  391 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 490  Q
    |||| ||||||||| || |||||||| || ||||||| ||||  | |||||||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  21991605 aatataggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgta 21991704  T
Q  491 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || || ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  21991705 cagtgtcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 21991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 31520916 - 31520739
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    |||||| ||||||||||||| |||||| || | ||||||||||| | ||||||||| |||||| |||||||| | || |||||||||| ||| |||||||    
T  31520916 aaataacggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgt 31520817  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| |||||| ||||||||| ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  31520816 acagtgacatcaaaagttcagtc-ccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatc 31520739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 32821241 - 32821066
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | ||||| ||||| | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaat 32821142  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| || || ||||||||||||||||| | ||||||||||||||| ||||| || |||||||||    
T  32821141 ggcatcaaaagttcagtcctcgtagtatcatcaattcattagattaacaagactacagttaatttagttttatcct 32821066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 398 - 568
Target Start/End: Complemental strand, 33688446 - 33688277
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| |||||||||||||| ||||||||||||  | | ||||||||||||||||||||||| ||| |||||||||| || | ||||||| || || |    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaacactataacatcaaaagtgttatgagtaacatcctactgtttgtccagtggc 33688348  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || ||||||||| ||   |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  33688347 atcaaaagttcagtctctatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatc 33688277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 44413564 - 44413394
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||| |||||| |||| || | |||||||||||  | ||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||     
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaa 44413465  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || ||||||||  ||  ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  44413464 atcaaaagttcggtctccatagtatcttcaattcatcaaattaacaaggctacacttaatctaattttatc 44413394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 399 - 567
Target Start/End: Original strand, 23111167 - 23111335
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| | ||||||||| || | ||||| ||||  | ||||||||||||||||||||||||| | |  |||||||||| ||| | ||||||||||| ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    | |||||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  23111267 tcaaaagttcaaccatcgtagtatcatcaattcattagattaacaagactacacttaatctaattttat 23111335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 422 - 570
Target Start/End: Original strand, 29173540 - 29173688
Alignment:
Q  422 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagta 521  Q
    |||||||||||  | ||||||||||||| ||  ||||||| |||  |||||||||| ||| ||||||||||||||||| ||||||||| || ||||||||    
T  29173540 gaatgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagta 29173639  T
Q  522 tcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||    
T  29173640 tcatcaattcatcaaactaacaagaatacacttaatctaattttatcct 29173688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 398 - 570
Target Start/End: Complemental strand, 48928748 - 48928577
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||||||||||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| ||  |||||||| |||||||||||| |||||||||| | |||||||||||||||||||||    
T  48928648 atcaaaagttcagtc-ccatagtattatcaattcatcagattaacaagattgcacttaatctaattttatcct 48928577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 411 - 570
Target Start/End: Original strand, 22687228 - 22687387
Alignment:
Q  411 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 510  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||||||| || ||  || |||||||||     
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcag 22687327  T
Q  511 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||  ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  22687328 tccccatagtatcatcaattcatcagattaacaataatacacttaatctaattttatcct 22687387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 27421563 - 27421393
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||  | | ||||| ||||| | ||||||||||||||||||||||||| |||  |||||||||| ||| ||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| || | ||| |||||| |||| |||| |||||||||| |||||||||||||||||||||||    
T  27421463 tcaaaagttcagtcct-ataatatcataaatttatcagattaacaagaatacacttaatctaattttatcct 27421393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 395 - 566
Target Start/End: Complemental strand, 41765266 - 41765095
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    ||||||||||  |||||||||| || ||||||||||||  ||| |||| || |||||| |||||||| |||| |||||| ||||||| |||||||||  |    
T  41765266 aaggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaatactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacggt 41765167  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    | ||| |||||| || || |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  41765166 ggcatcaaaagtccagtcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaatttta 41765095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 43686015 - 43686188
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |  | ||||||||||||| ||||||||||||||||| ||||||| |||  |||||||||||| | |||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacaccc-actgtttgtacaatg 43686113  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| ||||||||| ||   ||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  43686114 gcatcaaaagttcagtccctatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 43686188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 576
Target Start/End: Original strand, 4582894 - 4583073
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| | ||||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatga 4582993  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    ||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| |||||||||||||||||| |||||    
T  4582994 catcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctactttg 4583073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 9356014 - 9355839
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||||||||||||||| || ||||||||  ||| | |||| ||||||||||| ||| |||| |||| |||| || |||||| |||||||||| |    
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagt 9355915  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||| | |  ||||| |||| | ||||||||| |||||||||||||||||||||||||||| |||||    
T  9355914 gacatcaaaagtttagttctcatattatcgttaattcatcagattaacaagactacacttaatctaatttcatcct 9355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 392 - 570
Target Start/End: Original strand, 8861255 - 8861433
Alignment:
Q  392 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 491  Q
    |||| |||||||| ||||||||||| || ||||||||||||     ||||||||||||||| |||||||| ||| |||| |||||||||| |||||||||    
T  8861255 ataatggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtac 8861354  T
Q  492 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | || ||| ||||||| | ||  |||||||||||||||| |||| |||||||| | |||| ||||||||||||||||||    
T  8861355 agtggcatcaaaagttaagtccccatagtatcatcaattaatcagattaacaacaatacatttaatctaattttatcct 8861433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 6546494 - 6546667
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |||||||||| ||||    |||||||||||||||| |||||||| |||   ||||||||||||| | |||||||| | |    
T  6546494 ggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaa 6546593  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||| | |   ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  6546594 catcaaaagtttactatccatagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcct 6546667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 15612944 - 15612772
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||| || |||    |||||||||||||||||||||||| | || ||||||||||||||| |||||||| | ||     
T  15612944 ggaaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacatcaaagt-gttatgagtaacaccccagtgtttgtagagtgg 15612846  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||   ||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  15612845 catcaaaagttcagtccctataatatcatcaattcatcagattaacaagaatacacttaatttaattttatcct 15612772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 424 - 567
Target Start/End: Original strand, 26980325 - 26980468
Alignment:
Q  424 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatc 523  Q
    |||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| || ||| ||||||||| ||  |||| ||||    
T  26980325 atgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtccccataatatc 26980424  T
Q  524 atcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  26980425 atcaattcatcaaattaacaagaatacacttaatctaattttat 26980468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 32432431 - 32432600
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |  | ||||| ||||  | |||||||||||||||     ||||| |||  |||||||||||||| |||||||||||||    
T  32432431 aggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactat-----caaaaatgttgtgagtaacaccccattgtttgtacaatg 32432525  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| ||  ||||||||||||||||||||| | |||||||| |||| ||||| ||||||||||||    
T  32432526 acatcaaaagttcagtctccatagtatcatcaattcatcagactaacaagaatacagttaatataattttatcct 32432600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 421 - 570
Target Start/End: Complemental strand, 48928458 - 48928310
Alignment:
Q  421 agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagt 520  Q
    ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | |||||||  || ||| ||||||||| ||  ||||||    
T  48928458 agaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtcc-catagt 48928360  T
Q  521 atcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || |||||||||||| |||||||||| | |||||||||||||||||||||    
T  48928359 attatcaattcatcagattaacaagattgcacttaatctaattttatcct 48928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 11071182 - 11071354
Alignment:
Q  399 aaaattttatggtgaagttataagaatg-actttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||| ||||||||||| || | |||| | ||||| | | ||||||  |||||| |||||||| | ||  ||||||||| ||| |||||||||| ||||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| |  |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  11071282 atcaaaagttcagttctcatagtatcatcaattcatcagattaacaacactacgcttaatctaattttatcct 11071354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 546
Target Start/End: Complemental strand, 26524515 - 26524364
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || ||||||||||||  | ||| ||||||||||||||||||||| |||  ||| |||||| ||| ||||||| || |    
T  26524515 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagt 26524416  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaaga 546  Q
    | ||| |||||| || || ||||||||||||||||| |||| ||||||||||    
T  26524415 ggcatcaaaagtccagtcctcatagtatcatcaatttatcatattaacaaga 26524364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 12165727 - 12165897
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || ||||||||  | | ||||||||||  | |||||||||||||||| |||| ||| |||  |||||||||||||| |||||||||| ||     
T  12165727 ggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtgg 12165826  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||| ||||||| | ||     |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12165827 catcaaaagttaagtcccttaagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 12165897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 25691729 - 25691557
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaac-accccaatgtttgtacaatgac 497  Q
    |||||||||||||||||| || ||||||||||||    ||||||||||||||||||||||||| | |  |||||||  ||| || |||||||||| || |    
T  25691729 aaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaagtattgtgagtaattacctcactgtttgtacagtggc 25691630  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || || |||||| |  | ||||||| |||||||||||| |||||||| | |||| ||||||||||||||||||    
T  25691629 atcaacagttcagttcttatagtattatcaattcatcatattaacaaaaatacatttaatctaattttatcct 25691557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 437 - 568
Target Start/End: Original strand, 38053501 - 38053624
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||| |||||||||| |||| |||||||||||| |||| | ||||||||||||||||| ||||||||| |  ||||||| |||||||            
T  38053501 tgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagtgtcatcaa-------- 38053592  T
Q  537 attaacaagactacacttaatctaattttatc 568  Q
    ||||||||||||||||||||||||||||||||    
T  38053593 attaacaagactacacttaatctaattttatc 38053624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 568
Target Start/End: Complemental strand, 10359400 - 10359229
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || | ||||||||||  | | || ||||   |||| |||||||| |||| ||||||||| || | | ||| |||| |||    
T  10359400 ggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagtga 10359301  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacactt-aatctaattttatc 568  Q
    ||| ||||||||| || | |||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  10359300 catcaaaagttcagtc-tgatagtatcatcaattcatcagatcaacaagactacacttaaatctaattttatc 10359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 37704143 - 37704305
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||||| |||| |||| |||||| ||||| |||||  ||||||||||||||||| ||| ||||  |||| |||||||||||||| ||||||||||  |    
T  37704143 ggaaaattctatgatgaaattataaaaatgattttttt-atgaagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca--g 37704239  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |         |||| ||  |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  37704240 a---------ttcagtccccatagtatcatcaatttatcagattaacaagactacacttaatttaattttatcct 37704305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 15672830 - 15672775
Alignment:
Q  515 catagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  15672830 catagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcct 15672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 527
Target Start/End: Complemental strand, 34362334 - 34362205
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||| |||| ||||||||||||      |||||||||||||| |||||||| |||  |||||||||||||| |||||||||| ||     
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgg 34362235  T
Q  497 cattaaaagttcaatcatcatagtatcatca 527  Q
    || | |||||||| |  ||||||||||||||    
T  34362234 ca-tcaaagttcagttctcatagtatcatca 34362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 501 - 567
Target Start/End: Original strand, 44598745 - 44598811
Alignment:
Q  501 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||| |||||||  ||||||||||| ||||||||| |||||||||| |||| |||||||||||||||    
T  44598745 aaaaattcaatccccatagtatcataaattcatcagattaacaagaatacatttaatctaattttat 44598811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 43925167 - 43925247
Alignment:
Q  487 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||||||||||| ||||||||| ||  |||||||||||||| | |||| | |||||| | |||||||||||||||||||||    
T  43925167 tgtacaatgacatcaaaagttcagtctacatagtatcatcaact-atcagactaacaataatacacttaatctaattttatc 43925247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 568
Target Start/End: Complemental strand, 32593327 - 32593204
Alignment:
Q  444 aacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaaca 543  Q
    ||||||||| ||| |||| |||| |||||| ||||||| ||||| ||   ||  || ||||||||| || ||| |||||||||||||||||| |||| ||    
T  32593327 aacactatagcattaaaagtgtagtgagtagcaccccactgtttatatggtggtatcaaaagttcagtc-tcacagtatcatcaattcatcagattatca 32593229  T
Q  544 agactacacttaatctaattttatc 568  Q
    | ||| || ||||||||||||||||    
T  32593228 aaactgcatttaatctaattttatc 32593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Complemental strand, 37703551 - 37703513
Alignment:
Q  530 tcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  37703551 tcatcagattaataagactacacttaatctaattttatc 37703513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 1e-67; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 397 - 579
Target Start/End: Complemental strand, 19089664 - 19089482
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttgcta 579  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  19089564 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgcta 19089482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 396 - 579
Target Start/End: Complemental strand, 37663951 - 37663770
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatg 37663854  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttgcta 579  Q
    |||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  37663853 acatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgcta 37663770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 387 - 570
Target Start/End: Complemental strand, 25701278 - 25701095
Alignment:
Q  387 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 486  Q
    |||||||||||||||||||||||||||||| || | ||||||||||| | | ||||||||| ||||||||||||| |||| |||||||||||| | ||||    
T  25701278 ataaaataaaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtt 25701179  T
Q  487 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| |||||| ||||||||| || |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  25701178 tgtacagtgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaggactacactaaatctaattttatcct 25701095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 25184112 - 25184286
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatg 25184211  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||  ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  25184212 acatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcct 25184286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 879760 - 879586
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||||||||| |||||||| || ||||| | ||||| | |||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatg 879661  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||| |||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  879660 acatcaaaagtttaatcttcatagtatcatcaactcatcagattaacaagactacacataatctaattttatcct 879586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 55478108 - 55477929
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca----atgtttgta 490  Q
    |||||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||| |||     ||||||||    
T  55478108 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgta 55478009  T
Q  491 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55478008 caatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 55477929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 34361704 - 34361532
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaat 34361605  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||||||| | | ||||| |||||||||||||||   ||||||| | |||||||||| ||||||||||    
T  34361604 gacattaaaagttc-agcctcataatatcatcaattcatccggttaacaaaattacacttaatataattttatc 34361532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 397 - 568
Target Start/End: Complemental strand, 19440860 - 19440688
Alignment:
Q  397 ggaaaattttatggtgaa-gttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||||| ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| |||||||| |||||| |||  ||||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatg 19440761  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||| ||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19440760 gcatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagactacacttaatctaattttatc 19440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 396 - 568
Target Start/End: Original strand, 42199728 - 42199900
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||| | ||||||||| | |||||||||| ||||| | ||||||||| ||||||||||||||| |||||||||||| |||||| | |||||| ||||    
T  42199728 aggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatg 42199827  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| |||||||||  | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  42199828 acataaaaagttcagccctcatagtatcatcaattcatcagattaacaagactacacttaatataattttatc 42199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 34948306 - 34948135
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||||||||||||||| || ||||||||||||  |  |||||||||||||||||||||||| |||  |||||||||||||| |||||||| | || ||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggca 34948207  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  34948206 tcaaaagttcagtcctcataatatcatcaattcatcatattaacaagaatacacttaatctaattttatcct 34948135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 32912793 - 32912620
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| | | |||||| |||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaat 32912694  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || || |||||||||    ||||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  32912693 gatatcaaaagttcagcactcataatatcatcaatttatcaggttaacaagactacacttaatataattttatc 32912620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 17173292 - 17173463
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||||||  ||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||    
T  17173392 tcaaaagttcaatctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcct 17173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 28003197 - 28003024
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| | ||||  || ||| |||||||||| |||    
T  28003197 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagtga 28003098  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  28003097 catcaaaagttcagtcatcatagtatcatcaattcatcggattaacaagactgcacttaatctaattttatcct 28003024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 29584419 - 29584241
Alignment:
Q  387 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 486  Q
    |||||| ||||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  ||||||||||| || ||||    
T  29584419 ataaaaaaaaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctcactgtt 29584322  T
Q  487 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||| ||| ||||||||| || |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  29584321 tgtacaatggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 29584241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 36493897 - 36493728
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||||| |||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||| ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36493797 tcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatc 36493728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 17167715 - 17167886
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| ||  ||||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||    
T  17167815 tcaaaagttcattctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcct 17167886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 394 - 570
Target Start/End: Original strand, 50764732 - 50764903
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||  ||||||||| |||  |||||||||||||| |||||||||      
T  50764732 aaaggaaaattttatg---aagtcatgagaataacttttttgatgaagttaacacta--acatcaaaagtgttgtgagtaacaccccactgtttgtacgg 50764826  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||    
T  50764827 tgacatcaaaagttcaatcctcatagtatcatcaattcattagattaacaagaatacatttaatctaattttatcct 50764903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 50697238 - 50697414
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||||| || |||||||| |||| ||||| |||||   |||||| ||||||||||||| |||| | ||| ||||||||||| |  |||||||||    
T  50697238 taaaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtaca 50697337  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||| |||||||||||  || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  50697338 atgacatcaaaagttcaattctc-tagtatcatcaattcatcagattaacaagactacacttaatataattttatcct 50697414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 399 - 567
Target Start/End: Original strand, 27396618 - 27396786
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| ||| |||| ||| ||||||||||||| | ||||||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    | |||||||   || |||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  27396718 tcaaaagtttcgtcctcatagtatcatcaattcatcagattaacaagaatacacttaatttaattttat 27396786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 388 - 570
Target Start/End: Original strand, 4597984 - 4598165
Alignment:
Q  388 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 487  Q
    ||||| ||| ||||||||||||||||||| || ||||||||||||  | ||||||||||||||||||||| ||| |||  |||||||||||||| |||||    
T  4597984 taaaagaaatgaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatc-aaagtgttgtgagtaacaccccactgttt 4598082  T
Q  488 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| || ||| ||||||||| ||  | |||  |||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  4598083 gtacagtggcatcaaaagttcagtccccttagactcatcaattcatcatattaacaagaatacacttaatttaattttatcct 4598165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 9139245 - 9139418
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | | ||||||||| | ||||||||||  |||| ||| |||| |  | ||||||||||||||  ||||||||| |    
T  9139245 aaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaat--agtgagtaacaccccaccgtttgtacagt 9139342  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9139343 gacataaaaagttcaatccccatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 9139418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 35021249 - 35021073
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || | ||||||||||  | ||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||||||     
T  35021249 aaaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacat 35021150  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || | | |||||||   || || ||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  35021149 tggcgtcaaaagtttcgtcctcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcct 35021073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 439 - 568
Target Start/End: Original strand, 23761114 - 23761243
Alignment:
Q  439 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacat 538  Q
    ||||||||||||||||||||||| |||  ||||||||||| || |||||||| | |||||| ||||||||| ||  ||||||||||||||||||||| ||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtatcatcaattcatcagat 23761213  T
Q  539 taacaagactacacttaatctaattttatc 568  Q
    |||||||| |||||||||||||||||||||    
T  23761214 taacaagaatacacttaatctaattttatc 23761243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 38011851 - 38012024
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||| | || ||||||||||||  | |||||| |||||||||||||||||| |||| ||| || ||||||| |||||||||      
T  38011851 aaaggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacgg 38011950  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    || ||| ||||||||| ||  |||| ||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  38011951 tgccatcaaaagttcagtccccataatattatcaattcatcagattaacaagactacacttaatttaattttat 38012024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 49375966 - 49376137
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||||| || |||||||| || |||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||||| || ||||||| ||    
T  49375966 ggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacagtg 49376065  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
     ||| ||||||||| || |||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||    
T  49376066 gcatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagattacgcttgatctaattttat 49376137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 400 - 568
Target Start/End: Original strand, 6864038 - 6864206
Alignment:
Q  400 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 499  Q
    ||||| |||||||| || || ||||||||||||| | |||||||| |||||||||||||||| | |||||| ||||| || | | ||||||||||  |||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcat 6864137  T
Q  500 taaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     |||||| || || ||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||    
T  6864138 caaaagtccagtcctcatagtatcatcaatttatcagattaacaagactacatttaatttaattttatc 6864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 570
Target Start/End: Original strand, 32592096 - 32592266
Alignment:
Q  400 aaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacat 499  Q
    ||||||||| ||||||| || | ||||||||||| |||||||||||||||| |  ||||||| |||   ||||||||| ||| |||||||| | ||||||    
T  32592096 aaattttattgtgaagtcattataatgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacat 32592195  T
Q  500 taaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||||||||| ||  | ||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||    
T  32592196 caaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacatttaatttaattttatcct 32592266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 386 - 568
Target Start/End: Original strand, 3042600 - 3042790
Alignment:
Q  386 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 485  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| ||||| | ||||||||||||||||||||  ||| |||||||||||| ||||||  ||    
T  3042600 aataaaaaaaaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgt 3042699  T
Q  486 ttgtacaatgacattaaaagttcaatc--------atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || ||||||||||| |||| |||| ||        ||||  ||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  3042700 ttatacaatgacatcaaaaattcagtcattagagtatcaatgtatcatcaattcatcatattaacaagattacacttaatataattttatc 3042790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 39397918 - 39398082
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| |||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtga 39398017  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || ||  ||||||||||         |||||||||| |||||||||||||||||||||||    
T  39398018 catcaaaagttcagtcttctcagtatcatca---------attaacaagaatacacttaatctaattttatcct 39398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 565
Target Start/End: Complemental strand, 54499425 - 54499281
Alignment:
Q  422 gaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac-aatgacattaaaagttcaatcatcatagt 520  Q
    |||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||  |||||||| |||||||| ||||||||| ||   |||||    
T  54499425 gaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctctatagt 54499326  T
Q  521 atcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    ||||||||||||||| |||||||||| || |||||||||||||||    
T  54499325 atcatcaattcatcatattaacaagaatatacttaatctaatttt 54499281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 435 - 570
Target Start/End: Complemental strand, 46888330 - 46888195
Alignment:
Q  435 gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 534  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||| | ||||||||  | ||| ||||||||| ||  |||| |||| | ||||||||    
T  46888330 gatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtccccatactatcgttaattcatc 46888231  T
Q  535 acattaacaagactacacttaatctaattttatcct 570  Q
    | |||||||| |||||||||||||||||||||||||    
T  46888230 agattaacaaaactacacttaatctaattttatcct 46888195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 568
Target Start/End: Complemental strand, 55241315 - 55241145
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||    ||||||||| ||||||  |||||||||||   ||||||||||||| |||||||||| ||     
T  55241315 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagtgg 55241216  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| ||||||||| ||  |||||||||||||||| |||| | ||| |||| |||||||||||||||||||||    
T  55241215 catcaaaagttcagtccccatagtatcatcaatttatcaga-taagaagaatacacttaatctaattttatc 55241145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 458 - 567
Target Start/End: Complemental strand, 4934353 - 4934243
Alignment:
Q  458 aaaattgtaatgagtaacaccccaat-gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaa 556  Q
    |||| |||| ||||||||||||| || ||||||||| || ||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  4934353 aaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagttcaatcctcatagtatcatcatttcatcagattaacaagactacacttaa 4934254  T
Q  557 tctaattttat 567  Q
    |||||||||||    
T  4934253 tctaattttat 4934243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 411 - 570
Target Start/End: Complemental strand, 5048162 - 5048003
Alignment:
Q  411 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 510  Q
    ||||||||| ||||||| ||||  | |||||| ||| |||||||||||||| |||| ||||||  ||| || ||||||||| |||| || |||||||||     
T  5048162 tgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaagtgtagtgagtaggaccacactgtttgtacgatgatatcaaaagttcag 5048063  T
Q  511 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |   ||||||||||||||||||| | |||||||||||| || ||||||||||||||||||    
T  5048062 ttcccatagtatcatcaattcatgagattaacaagactgcatttaatctaattttatcct 5048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 570
Target Start/End: Original strand, 32579439 - 32579619
Alignment:
Q  392 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt-- 489  Q
    |||||||||||||||||||||||||| | ||||||||||||  | |||||| |||| ||||||||||||| || | |||||| ||||||| |||||||      
T  32579439 ataaaggaaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaagtgcagtgagtagcaccccagtgtttgttg 32579538  T
Q  490 -acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||  || ||| ||||||| | || ||||||||| |||| ||||||| ||||||| ||||  ||||||||||||||||||||    
T  32579539 tacggtgccatcaaaagtttagtc-tcatagtattatcagttcatcagattaacatgactgtacttaatctaattttatcct 32579619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 396 - 525
Target Start/End: Original strand, 37287732 - 37287862
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    ||||||||| ||||||||||| || |||||||||||||  | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||||| |    
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 37287831  T
Q  495 gacattaaaagttcaatcatcatagtatcat 525  Q
    | ||| |||||||||||| ||||| ||||||    
T  37287832 ggcatcaaaagttcaatcctcataatatcat 37287862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 398 - 567
Target Start/End: Original strand, 37775670 - 37775837
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| || |||||||| || | ||||| ||||| | |||||||| |||||||| || |||| |||  |||||||||||||| |||||||||| || |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    || ||||||||   | |  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37775770 atcaaaagttcccccct--tagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 37775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 47253751 - 47253913
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||| |||||||| |||  ||||||||| |||| ||||| |||| |||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| || ||||||||        |||||| |||||||||| |||||||||| ||||||||||||    
T  47253850 tcaaaagttcagtcctcatagta--------tcatcagattaacaagaatacacttaatttaattttatcct 47253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 7703517 - 7703679
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||| | |||| || ||||||||||||  | ||||||||||||||||||||||||| |||  | |||||||||||| |||||||||  |||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtga 7703616  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||| ||||||||| ||  |||||||        |||||| |||||||||| ||||||||||||||||||||    
T  7703617 catcaaaagttcagtccccatagta--------tcatcagattaacaagaatacacttaatctaattttat 7703679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 570
Target Start/End: Complemental strand, 30002840 - 30002670
Alignment:
Q  392 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 491  Q
    ||||||||||| | ||||||||||| || | ||||| ||||  | ||||||||||||| || |||||||| |||  ||||||||||| || |||||||||    
T  30002840 ataaaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtac 30002741  T
Q  492 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | |||||| ||||||||| || || |||||||        |||| |||||||||| |||||||||||||||||||||||    
T  30002740 agtgacatcaaaagttcagtcttcttagtatc--------atcagattaacaagaatacacttaatctaattttatcct 30002670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 33341397 - 33341571
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattg----taatgagtaacaccccaatgtttgtacaat 494  Q
    |||||| ||| ||||||| || ||||||| ||||  | |||| ||||||||||| |||||||||||    |   ||| ||||||||| |||||||||| |    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaattgattgttgcgaggaacaccccactgtttgtacagt 33341496  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  33341497 ggcatcaaaagttcagtcc-catagtatcatcaattcatcagattaacaagaatatacttaatataattttatcct 33341571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 4205113 - 4205218
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  ||| |||||||||| |||||||||||    
T  4205113 aaaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaa 4205212  T
Q  494 tgacat 499  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 4396324 - 4396410
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||||||||| ||| ||||||| |||| |||||||||||   |||||||||||||||||||| |||| |||||||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacccca 4396410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 33816742 - 33816571
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||| | |||| || ||||||| ||||  | |||||| |||| | || |||||||| |||| |||||| |||| || | ||| |||  || ||    
T  33816742 aaaattatatgcttaagtcatgagaatgatttttctggtgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggca 33816643  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| ||  |||||||||||||||| |||| |||||||||| | |||||||||||||||||||||    
T  33816642 tcaaaagttcagtctccatagtatcatcaatttatcagattaacaagattgcacttaatctaattttatcct 33816571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 505 - 570
Target Start/End: Original strand, 1815409 - 1815474
Alignment:
Q  505 gttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||    
T  1815409 gttcagtcctcatagtatcatcaattcatcatattaacaagactacatttactctaattttatcct 1815474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 53124287 - 53124371
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||||||| |||| |||||| || | ||||| ||||| | ||||||||||||||||||||||||| | |||||||||||||||||    
T  53124287 ggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacccca 53124371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 396 - 527
Target Start/End: Complemental strand, 35025800 - 35025669
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| |||| |||||| || | ||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| ||||| |||  ||    
T  35025800 aggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttg 35025701  T
Q  496 acattaaaagttcaatcatcatagtatcatca 527  Q
    |||| ||||||||| || || |||||||||||    
T  35025700 acatcaaaagttcagtcctcgtagtatcatca 35025669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 52516599 - 52516655
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataaca 455  Q
    |||||||||||||||||| || ||||||||||||  | |||||||||||||||||||    
T  52516599 aaaattttatggtgaagtcatgagaatgacttttatggtgaagttaacactataaca 52516655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 17272009 - 17272075
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    |||||||||| |||||||||||  |  |||||||||||  | |||||||||||||||||||||||||    
T  17272009 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 17272084 - 17272134
Alignment:
Q  517 tagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  17272084 tagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 17272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 479
Target Start/End: Complemental strand, 7152319 - 7152235
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 479  Q
    |||||||||| ||||||||||| ||   ||||||||||  | | ||||||||| ||||||||||||| | || ||||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacaccc 7152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 52195687 - 52195645
Alignment:
Q  403 ttttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    ||||||||||||||||| ||||||||||||  |||||||||||    
T  52195687 ttttatggtgaagttatgagaatgacttttctgatgaagttaa 52195645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 486
Target Start/End: Complemental strand, 23518473 - 23518425
Alignment:
Q  438 gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 486  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||| ||||    
T  23518473 gaagttaacactataacattaaaactgtagtgactaacaccccactgtt 23518425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 52102915 - 52102963
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||||||||| |||||| | ||||||||||||||| | |||||||||    
T  52102915 ggaaaattttattgtgaagatttaagaatgacttttttggtgaagttaa 52102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 387 - 570
Target Start/End: Original strand, 32267020 - 32267203
Alignment:
Q  387 ataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 486  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  32267020 ataaaataaaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtt 32267119  T
Q  487 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||| ||||||||| || ||||| |||||||||  ||||| |||||||||| |||||||||||||||||||||||    
T  32267120 tgtacaatgacatcaaaagttcactcctcatattatcatcaacccatcagattaacaagattacacttaatctaattttatcct 32267203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 15382927 - 15383102
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||||||||||| |||||||||||||| ||||  |||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaat 15383026  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15383027 gtcatcaaaagttcagtcatcgtagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 15383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 407 - 568
Target Start/End: Complemental strand, 28564951 - 28564790
Alignment:
Q  407 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 506  Q
    ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||    
T  28564951 atggtgaagttatgaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagt 28564852  T
Q  507 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28564851 tcagtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatc 28564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 398 - 568
Target Start/End: Original strand, 10922724 - 10922894
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||||||||||||| | || ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgac 10922823  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  10922824 atcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatcttattttatc 10922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 18422646 - 18422820
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||  ||||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatg 18422745  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  18422746 acatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagattacacttaatctaattttatcct 18422820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 30254419 - 30254592
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||| || | | |||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaatacac-actgtttgtacaatg 30254517  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| || ||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  30254518 acatcaaaagttcagtcctcaaagtatcatcaattcatcagattaacaagactagacttaatctaattttatcct 30254592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 15752027 - 15752198
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||| | |||||||||||||||||||| |||| | || ||||||||||| || ||||||||||||| ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 15752198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 37619079 - 37618899
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagt--aacaccccaatgtttgtac 491  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||  ||||||||| ||||||||     
T  37619079 aaaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaa 37618980  T
Q  492 aatgacattaaaagttcaatcatcatag--tatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||| ||||||||| |  ||||||  |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  37618979 aatgacatcaaaagttcagttctcatagtatatcatcaattcatcagattaacaatactacacttaatctaattttatcct 37618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 2959743 - 2959917
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||| |||| |||||||||| ||    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtg 2959842  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| || ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  2959843 acatcaaaagttcagtcctcatagtgtcatcaattcatcagattaacaagaccacacttaatctaattttatcct 2959917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 423 - 568
Target Start/End: Complemental strand, 9903208 - 9903063
Alignment:
Q  423 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 522  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||| ||||||||||||  |||| |||    
T  9903208 aatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttcaatccacatactat 9903109  T
Q  523 catcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9903108 catcaattcatcaaattaacaagactacacttaatctaattttatc 9903063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 19899950 - 19899778
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||| || |||||||| ||||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatg 19899851  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||| |||||||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  19899850 gcatcaaaagttcaaccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 19899778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 16415639 - 16415815
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaa 493  Q
    |||||||||| || |||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||| |||||||||||| || ||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||| |||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  16415739 tggcatcaaaagttcagccatcatagtatcatcaattcattagattaacaagactacacttaatctaattttatcct 16415815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 394 - 569
Target Start/End: Complemental strand, 34012560 - 34012385
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || | |||||| |||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |     
T  34012560 aaaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaag 34012461  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
    || ||| ||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  34012460 tggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagattacacttaatctaattttatcc 34012385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 397 - 575
Target Start/End: Original strand, 38823210 - 38823388
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||  | | |||||||||||||| ||||||||||||   ||||||||||||| | |||||||| ||     
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtgt 38823309  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctccttt 575  Q
    ||| ||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  38823310 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctacttt 38823388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 394 - 576
Target Start/End: Original strand, 48620630 - 48620812
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| |||| ||||||||| | ||||||||||    ||||||||||| ||||||||||||| |||  |||||||||||||| ||||||||||     
T  48620630 aaaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacag 48620729  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    |||||| ||||||||| ||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  48620730 tgacatcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttg 48620812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 30327132 - 30326959
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||| ||||||| |||| |||||||||||   |||| |||||||||||||||||||| |||||||||||| |||| |  |||||||||||      
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaatag 30327033  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  30327032 catcaaaagttcagtcatcatagtatcatcaattcatcagattaacaaaactacacttaatctcattttatcct 30326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 407 - 568
Target Start/End: Original strand, 37451292 - 37451452
Alignment:
Q  407 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 506  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||||||||||| |||||| |||||||||| |  |||||||||||||||| ||||||    
T  37451292 atggtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagt 37451391  T
Q  507 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| || || |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37451392 tcagtcctc-tagtatcatcaatttatcatattaacaagactacacttaatctaattttatc 37451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 23999343 - 23999514
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||||||||||||||| |||||||||| ||||| | |||||||||||||| ||||| |||| | ||| ||||||||||||| | |||||| |||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatga 23999442  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| |||||||||  | ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||    
T  23999443 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatc 23999514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 437 - 568
Target Start/End: Original strand, 51128895 - 51129026
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||  |||||||||||||||| ||||||||| |||| ||||||||||||||||||||     
T  51128895 tgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcatcaattcatcat 51128994  T
Q  537 attaacaagactacacttaatctaattttatc 568  Q
    ||||||||||||||||||||| ||||||||||    
T  51128995 attaacaagactacacttaatataattttatc 51129026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 386 - 568
Target Start/End: Complemental strand, 27763500 - 27763320
Alignment:
Q  386 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 485  Q
    |||||||  ||| |||| |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  27763500 aataaaaataagaaaaaatttatggtaaagttataagaatgatttttttg-tgaagttaacactataacatcaaaaatgtaatgagtaacacccata-gt 27763403  T
Q  486 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||| |||||||| |||||| ||  | ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  27763402 ttgtagaatgacatcaaaagtccagccctcatagtatcatcaatttatcaggttaacaagactacacttaatctaattttatc 27763320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 28769651 - 28769819
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| |||| ||| |||||||   ||||||||||||||| ||||||||| ||||||||||||||||| |  |||||||||||| ||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacaccc-accgtttgtacaatggca 28769749  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||| ||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28769750 tcaaaggttcggtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatc 28769819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 42721035 - 42721208
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || | ||||| ||||| | |||||||| | ||||| ||| |||| | || |||||||||||||| |||||||||| | |    
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtacagtaa 42721134  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42721135 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 42721208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 410 - 570
Target Start/End: Original strand, 4330288 - 4330450
Alignment:
Q  410 gtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacacccc-aatgtttgtacaatgacattaaaagtt 507  Q
    |||||||||| ||||||||||||  ||||||| ||| ||||||| |||||||| |||| ||||||||||||| |||||||||||| ||  || |||||||    
T  4330288 gtgaagttatgagaatgacttttctgatgaagataaacactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaagtt 4330387  T
Q  508 caatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  4330388 cagtcatcatagtatcatcaatttatcagattaacaagactgcacttaatctaattttatcct 4330450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 7079254 - 7079070
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-----------gt 485  Q
    ||||||||||||||| |||| || | ||||||||||| | ||||||||||||||||| ||||||| |||  |||||||||||||| |           ||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactaacacctcactgt 7079155  T
Q  486 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  7079154 ttgtacaatgacatcaaaagttcagtcatcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttatcct 7079070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 394 - 568
Target Start/End: Complemental strand, 11742533 - 11742360
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||||||| |||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |||  | |||||||||||| ||||||||||     
T  11742533 aaaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacag 11742434  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||| ||||||||| ||  |||| |||||||||||||||  |||||||||| |||||||||||||||||||||    
T  11742433 tgacatcaaaagttcagtc-ccataatatcatcaattcatcggattaacaagaatacacttaatctaattttatc 11742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 8222125 - 8222297
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| || |||||||| |||| |||||| ||||   ||||||||||||||||||||||||| |||||||||||||||| ||  ||   ||||||    
T  8222125 aaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaat 8222221  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8222222 ggcatcaaaagttcagttctcatagtatcatcaattcatcatattaacaagactacacttaatctcattttatcct 8222297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 576
Target Start/End: Original strand, 41926161 - 41926338
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||||| | ||||| ||||| ||||||||||| ||||||||||||||| | || ||||||| | |||| |||||||||| || ||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaatatagtgagtaatatcccactgtttgtacagtggca 41926260  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    | | ||||||| ||   |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  41926261 tcacaagttcagtccctatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctactttg 41926338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 3309144 - 3309311
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||| |||| || ||||||||||||  | | ||||||||||||||||||||||| |||  |||||||||||| | |||||||||| ||     
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacaccc-actgtttgtacagtgg 3309242  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
     || |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3309243 tatcaaaagttcaatcttcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 3309311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 403 - 570
Target Start/End: Original strand, 47279191 - 47279358
Alignment:
Q  403 ttttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaa 502  Q
    |||| ||||||||| || ||||||| ||||| | ||||||||||| ||||  ||||||| |||  |||||||||||||| |||||||||| || |||  |    
T  47279191 ttttttggtgaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcga 47279290  T
Q  503 aagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  47279291 aagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 47279358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 10182189 - 10182015
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||| |||||| |||| | || || ||||||| ||| |||||||||| ||    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtg 10182090  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| ||||||||| || |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  10182089 gcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaagattacacttaatctaattttatcct 10182015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 46931406 - 46931578
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||| |||||||||||||||||||||| |||||   |   |||||||||||||||||||||||| |||||||||||| |||||| |||||||| || |    
T  46931406 aaaattctatggtgaagttataagaatgaattttttttttgtgaagttaacactataacatcaaaaatgtaatgagtaataccccactgtttgtagaacg 46931505  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||| |||| ||||  | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  46931506 gcatcaaaaattcagccctcataatatcatcaattcatcaggttaacaagactacacttaatataattttatc 46931578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 398 - 570
Target Start/End: Original strand, 14758038 - 14758210
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||||||| |||||||| || ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||| | | |||||||||  || |    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcacacaactgtttgtacggtggc 14758137  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| ||  |||||| |||||||||||| | |||||||||||| |||||||||||||||||||||    
T  14758138 atcaaaagttcagtccccatagtttcatcaattcattagattaacaagactgcacttaatctaattttatcct 14758210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 27267376 - 27267212
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||| |||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| ||||| |||||||| |||||||||| ||     
T  27267376 ggaaaattatatg-tgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacaccccactgtttgtacagtgg 27267280  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattt 564  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27267279 cattaaaagttcagtctccatagtatcatcaattcatcagattaacaagactacacttaatctaattt 27267212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 393 - 565
Target Start/End: Original strand, 39393375 - 39393547
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||||| || ||||||||||| ||||||||||||   ||||||||||||||||| |||||||| |||  ||||||| ||  || ||||||||||    
T  39393375 taaaggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtaca 39393474  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
     || ||| ||||||| ||||  ||||||||||| ||||||||| |||||||||| ||||||| ||||||||||    
T  39393475 gtggcatcaaaagtttaatccccatagtatcataaattcatcagattaacaagaatacacttcatctaatttt 39393547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 32216091 - 32216224
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||| | | ||||||||| || || ||||||||||||||||| |     
T  32216091 tgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatcaattcattag 32216190  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||| |||| |||||||| |||||||||||    
T  32216191 attaacaaaactaaacttaatcaaattttatcct 32216224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 413 - 570
Target Start/End: Complemental strand, 27533144 - 27532988
Alignment:
Q  413 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 512  Q
    ||||||| ||||||||||||  | |||||||||||||||| |||||||| | |  || |||||| |||| | |||||||| || ||| ||||||||||||    
T  27533144 aagttatgagaatgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagttcaatc 27533045  T
Q  513 atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
      ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  27533044 cccatagtatcatcaattcatcagattaacaagaatacacttaatc-aattttatcct 27532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 31621733 - 31621560
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || |||||||| || ||||||||||||    |||||| |||||||||||||||||  |||| |||||| ||||||  | |||||||  ||     
T  31621733 ggaaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacatcaaaggtgtattgagtagcaccccgctatttgtacggtgg 31621634  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| |||| |||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31621633 catcaaaaattcagtccccatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 31621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 47682673 - 47682504
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacac-cccaatgtttgtacaatg 495  Q
    |||||||||||||||||||| || ||| ||||||||| | ||||||||||||||   ||| |||| |||  |||||||||| |||| || ||||||| ||    
T  47682673 ggaaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacactag--cataaaaaatgttgtgagtaacactcccactgcttgtacagtg 47682576  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
      || ||||||||| || |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  47682575 gtatcaaaagttcattcctcatagtatcatcaattcatcagattaacaagactacatttaaactaattttat 47682504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 27564084 - 27563912
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||| || ||||||||||| | ||||| |||||  | |||||||||||||||||| | |||| | || |||||||||| ||| |||||||| | ||||    
T  27564084 aaaattctacggtgaagttatgaaaatgattttttttagtgaagttaacactataactttaaaaatatagtgagtaacactccactgtttgtatagtgac 27563985  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| |    ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  27563984 atcaaaagttcagttccgataatattatcaattcatcagattaacaagactacacttaatctaattttatcct 27563912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 27227657 - 27227492
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||| ||||| | ||||||||||||||   ||| |||| |||| |      |||| || |||||||||| ||     
T  27227657 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtact------cacctcactgtttgtacagtgg 27227566  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  27227565 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcct 27227492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 576
Target Start/End: Original strand, 1547280 - 1547454
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||| ||| ||||||| ||     
T  1547280 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcag 1547379  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    || ||| ||||||||| |  ||||||||        |||||| |||||||| | ||||||||||||||||||||||| |||||    
T  1547380 tggcatcaaaagttcagttctcatagta--------tcatcagattaacaaaaatacacttaatctaattttatcctactttg 1547454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 3534968 - 3535101
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||||||||||||||| |||  |||||||||||  | ||||||| || |||||| ||||||||| ||  | || ||| ||||||||||||     
T  3534968 tgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatcaattcatcag 3535067  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||||| |||| ||||||||||||||||||    
T  3535068 attaacaagaatacatttaatctaattttatcct 3535101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 396 - 496
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||||  ||||| |||| |||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataaca-cccactgtttgtacaatg 30254951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 392 - 567
Target Start/End: Complemental strand, 238697 - 238523
Alignment:
Q  392 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 491  Q
    |||||| |||||| ||| ||||||| |  | ||| ||||||| | ||||||||||||||||  || |||| |||  ||||||||| || | |||||||||    
T  238697 ataaagaaaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaacatcc-actgtttgtac 238599  T
Q  492 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||||| ||||||||| ||  |||||||||| ||||| |||| | |||||||| ||||||||||||||||||||    
T  238598 aatgacatcaaaagttcagtccccatagtatcaacaattaatcagactaacaagaatacacttaatctaattttat 238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 15168081 - 15168265
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||||| ||| ||||||| || ||||||  ||||  | |||||| ||||||||| |||||||| |||| |||||| ||||||| |||||||||     
T  15168081 taaaggaaaattctatcgtgaagtgatgagaatgctttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttgtacg 15168180  T
Q  493 atga-------cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||        ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  15168181 ttgtacggtggcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactgcagttaatctaattttatcct 15168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 40884849 - 40884982
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    |||||| ||||| |||||||||||| |||| |||||| ||||||| |||||||||  || ||| ||||||||| ||   |||||||| |||||||||||     
T  40884849 tgaagtcaacaccataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcagtccctatagtatcttcaattcatcag 40884948  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||||| | ||||||||||| |||||||||    
T  40884949 attaacaagattgcacttaatctagttttatcct 40884982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 484 - 570
Target Start/End: Original strand, 25160715 - 25160801
Alignment:
Q  484 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  25160715 gtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcattagattaataagactacacttaatctcattttatcct 25160801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 399 - 566
Target Start/End: Complemental strand, 33725778 - 33725611
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||| |||| |  ||||||||||||    |||||| ||| ||||| |||||||| |||| |||||| || |||| | ||| |    || ||    
T  33725778 aaaattctatggtaaagtcaagagaatgacttttctagtgaagtcaacgctatatcatcaaaagtgtattgagtagcagcccactatttctttggtggca 33725679  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    | ||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  33725678 tcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactgcacttaatctaatttta 33725611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 545
Target Start/End: Original strand, 21289661 - 21289816
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaa-------aattgtaatgagtaacaccccaatgtttgt 489  Q
    |||||| | ||| ||||||| || ||||||||||||  | |||||||||||||||| ||| ||       || |||| |||||||||||||| |||||||    
T  21289661 ggaaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaataataaaaaatgtagtgagtaacaccccactgtttgt 21289760  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaag 545  Q
    ||| || ||| ||||||||| ||   |||||||||||||||||||| |||||||||    
T  21289761 acagtggcatcaaaagttcagtccctatagtatcatcaattcatcagattaacaag 21289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 461
Target Start/End: Original strand, 22170745 - 22170814
Alignment:
Q  392 ataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    ||||||||||||| ||||||||| | || | ||||||||||   ||||||||||||||||||||||||||    
T  22170745 ataaaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 22170806 - 22170880
Alignment:
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| ||  |||| |||||||||||||| | ||||| || ||||||||||||||||||| |||||    
T  22170806 acatcaaaagttcagtctacataatatcatcaattcattagattaataacactacacttaatctaatttcatcct 22170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 4964102 - 4964062
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactt 430  Q
    ||||||||||||||| |||||||||||||| ||||| ||||    
T  4964102 aaataaaggaaaattctatggtgaagttatgagaattactt 4964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 38759652 - 38759700
Alignment:
Q  520 tatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||||||||| ||||| || |||||| ||||| ||||||||||    
T  38759652 tatcatcaattcatcatattaataaaactacatttaatttaattttatc 38759700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 7e-63; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 1150297 - 1150123
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||| |    
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacg 1150198  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1150197 acatcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcct 1150123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 10555393 - 10555220
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatga 10555294  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10555293 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 10555220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 43643788 - 43643613
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaat 43643689  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||  ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  43643688 gacatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcct 43643613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 406 - 570
Target Start/End: Complemental strand, 37970701 - 37970537
Alignment:
Q  406 tatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaag 505  Q
    ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| |||||    
T  37970701 tatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaaaag 37970602  T
Q  506 ttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||  | ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  37970601 ttcagccctcatagtatcatcaattcatatgattaacaagactacacttaatctaattttatcct 37970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 27083030 - 27082858
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||| ||||||||  | |||||||||||||||| |||||||| |||| |||||||||||||| ||||||| || ||    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtg 27082931  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27082930 gcattaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagactacacttaatctaattttatc 27082858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 393 - 569
Target Start/End: Original strand, 34894962 - 34895138
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||||| ||||||||||| || | ||||||||||  ||||||||||||||||||||||||| | |||| |||||||||| ||| |||||||| |    
T  34894962 taaaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaa 34895061  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
     || ||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34895062 gtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagactacacttaatctaattttatcc 34895138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 394 - 568
Target Start/End: Original strand, 1204923 - 1205097
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    |||||||||||||| |||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||| ||||||||||  || |||||||||||    
T  1204923 aaaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaa 1205022  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||| ||||||||| || |||||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtatcatcagttcatcatattaacaagattacacttaatctaattttatc 1205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 16447067 - 16446893
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || | ||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatg 16446968  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| ||||||| | ||  |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16446967 gcatcaaaagtttagtccccatactatcatcaattcatcagattaacaagactacacttaatttaattttatcct 16446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 396 - 566
Target Start/End: Complemental strand, 30654775 - 30654605
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||||||||||||||| |||||| ||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||||| |||||||  ||||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatg 30654676  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    |||| |||||||||  | |||||||||||||| |||||||  |||||||||||||||||||| ||||||||    
T  30654675 acatcaaaagttcagccttcatagtatcatcacttcatcaggttaacaagactacacttaatttaatttta 30654605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 36695159 - 36694984
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||||    
T  36695159 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaat 36695060  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||| ||  ||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||    
T  36695059 gacatcaaaagttcagtccccatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcct 36694984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 410 - 568
Target Start/End: Complemental strand, 31934064 - 31933906
Alignment:
Q  410 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 509  Q
    |||||||||| ||||||| ||||| | ||||||||||||||| | ||||||| | ||||||||||||||||| | ||| ||||||||||| |||||||||    
T  31934064 gtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttca 31933965  T
Q  510 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  31933964 gtcattatagtatcatcaattcatccgattaacaagactacacttaatctaattttatc 31933906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 390 - 570
Target Start/End: Complemental strand, 6098716 - 6098536
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    |||||| |||||||| ||||||||||| || | ||| ||||||| | ||||||||| |||||| |||||||| | || |||||||||||||| |||||||    
T  6098716 aaataatggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgt 6098617  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| |||||| ||||||||| ||  ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  6098616 acagtgacatcaaaagttcagtccccatagtatcgtcaattcatcagattaacaagactacatttaatctaattttatcct 6098536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 409 - 568
Target Start/End: Complemental strand, 23854610 - 23854451
Alignment:
Q  409 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 508  Q
    |||||||| || ||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||||||||| ||||||||    
T  23854610 ggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatgacatcaaaagttc 23854511  T
Q  509 aatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | || ||||||||||||||| |||| | |||||||| |||||| ||||||||||||||||    
T  23854510 agtcctcatagtatcatcaactcattagattaacaatactacaattaatctaattttatc 23854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 38643975 - 38644150
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||| | || ||||||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||| |||||||  | |    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagt 38644074  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  38644075 ggcatcaaaagttcagtctccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 38644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 575
Target Start/End: Original strand, 13307622 - 13307800
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||||||||||| |||  ||||||||||| || | |||||||| |||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtga 13307721  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctccttt 575  Q
    ||| ||||||||| ||  |||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  13307722 catcaaaagttcagtccccatagtattatcaattcatcagattagcaagaatacacttaatctaattttatcctacttt 13307800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 465843 - 466012
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||||||||||||||| || | ||||||||||  | |||||||||||| |||||||||||| |||  |||||||||||||| |||||||||| || ||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | |||| |||| ||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  465943 tcaaaaattcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatc 466012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 12876108 - 12876281
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||| |||| |  | ||||||||||  ||||||||||||||||||| || |||| |||  |||||||||||| | ||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatga 12876207  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || |||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||    
T  12876208 catcaaaagttcagtcctcatagtatcatcaattcatcagattaagaaggatacacttaatctaattttatcct 12876281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 397 - 569
Target Start/End: Complemental strand, 5300137 - 5299965
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || |||||||||||||  ||||||||||||||||| |||||||| |||  | |||| ||| | | |||||||||| ||     
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtgg 5300038  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
    ||| ||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5300037 catcaaaagttcagtccttatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcc 5299965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 16222860 - 16223035
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| || |||||| | || ||||||||||||  | |||| ||||||||||||||| |||| | || ||||||   |||||  |||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaat 16222959  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  16222960 gacatcaaaagttcagtcctcatagtatcatcaattcatccgattaacaagactacacttaatctaattttatcct 16223035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 411 - 570
Target Start/End: Original strand, 11727037 - 11727196
Alignment:
Q  411 tgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaa 510  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||||||||||| |||  | |||||||||||| | |||||| | || ||| |||||||||     
T  11727037 tgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcag 11727136  T
Q  511 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  11727137 tcctcataatatcatcaattcatcaaattaacaagaatacatttaatctaattttatcct 11727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 458 - 568
Target Start/End: Complemental strand, 1149762 - 1149652
Alignment:
Q  458 aaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaat 557  Q
    |||| |||||||||||||| |||| ||||||||||||||||| ||||||||  || ||||||||||||||| |||||| |||||||||||||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtatcatcaactcatcagattaacaagactacacttaat 1149663  T
Q  558 ctaattttatc 568  Q
    |||||||||||    
T  1149662 ctaattttatc 1149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 394 - 570
Target Start/End: Original strand, 9864144 - 9864320
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  9864144 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 9864243  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||||| ||  |||| |||||||||||||||| | ||| |||| |||||||||| ||||||||||||    
T  9864244 tgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcct 9864320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 396 - 576
Target Start/End: Complemental strand, 34952223 - 34952043
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||| || |||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtg 34952124  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    |||| ||||||||| ||    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||    
T  34952123 acatcaaaagttcagtccctttagtatcatcaattcatcaaattaataagaatacacttaatctaattttatcctactttg 34952043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 41362517 - 41362685
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||||||||| | ||||||||||| | ||||||||||||||   ||| ||||| ||| |||||||||||||| | |||||| | |||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactag--cataaaaat-gtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| |||||||||  | |||||||||||||||||||||| ||||||||||||| |||| || ||||||||||    
T  41362614 catcaaaagttcagacctcatagtatcatcaattcatcagattaacaagactaaacttgatataattttatc 41362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 44869495 - 44869664
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatg--agtaacaccccaatgtttgtacaat 494  Q
    |||||||| || |||||| |||||||||| ||||||| | |||||||||||||||||||| |||| | |  ||  ||| |  ||||| |||||| |||||    
T  44869495 ggaaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaagtattttgtgagtgat-ccccactgtttgcacaat 44869593  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    ||||| |||||||||||| ||||||||||||||||| |||| |||||||| | ||||||||||||||||||    
T  44869594 gacatcaaaagttcaatcgtcatagtatcatcaatttatcagattaacaataatacacttaatctaatttt 44869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 576
Target Start/End: Complemental strand, 35459813 - 35459723
Alignment:
Q  486 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    |||||||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||    
T  35459813 ttgtacaatgacattaaaagttcagtcctcataatatcatcaactcatcagattaacaagactacacttaatctaattttatcctactttg 35459723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 8803998 - 8803837
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||    ||||||||| | ||||||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||    
T  8803998 aggaaaattctatggtgaagtcata----tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatg 8803903  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| |||||||||  |       ||||||||||| ||||  |||||||||||||||||||| ||||||||||    
T  8803902 acatcaaaagttcagcc-------tatcatcaatttatcaggttaacaagactacacttaatataattttatc 8803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 395 - 576
Target Start/End: Original strand, 40862416 - 40862597
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 493  Q
    |||||||||| ||| ||||||| |  | ||| ||||||  | ||||||||||||||||| |||||||  |||  |||||||||||||| |||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaa 40862515  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    || ||| ||||||||| || |||| ||||||||||||  ||| | |||||| | ||||||||||||||||||||||| |||||    
T  40862516 tggcatcaaaagttcagtc-tcatggtatcatcaatttttcatactaacaaaaatacacttaatctaattttatcctactttg 40862597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 7891137 - 7890977
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || |||||||||||||   ||||||||||||||||||||||||| |         ||||| |||  |||||||||||| ||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaat---------aacactccaccgtttgtacaatggca 7891047  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||  || ||||| |||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  7891046 tcaaaagttcggtcctcataatatcatcaattcatcagattaacaagactacactcaatctagttttatc 7890977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 33906223 - 33906382
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||| |||| ||||||||||||  | |||||| |||||||||  || |||| |||| |||||| ||||||| ||||| ||          
T  33906223 ggaaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacactatagtattaaaagtgtagtgagtagcaccccactgtttata------ 33906316  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
          ||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  33906317 ------aagttcagtcttcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatc 33906382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 393 - 568
Target Start/End: Complemental strand, 39099304 - 39099139
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa-ttgtaatgagtaacaccccaatgtttgtac 491  Q
    |||||||||||| ||||||||||| || ||||||||||||  |||||        |||||||||||||| ||| ||   ||||||||||| | |||||||    
T  39099304 taaaggaaaattctatggtgaagtcatgagaatgacttttctgatga--------ctataacatcaaaagttgcaa---gtaacaccccactctttgtac 39099216  T
Q  492 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | |  ||| ||||||||| || |||||||||| ||||||||||| |||||||| | |||||||||||||||||||||    
T  39099215 actagcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaaaaatacacttaatctaattttatc 39099139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 15009241 - 15009305
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    |||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaa 15009305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 424 - 570
Target Start/End: Complemental strand, 41911153 - 41911006
Alignment:
Q  424 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta-caatgacattaaaagttcaatcatcatagtat 522  Q
    |||| ||||| | ||||||||| |||||| |||||||| |||  ||||||||||||| |   || || || |  ||| |||| |||| ||| ||||||||    
T  41911153 atgatttttttggtgaagttaatactatatcatcaaaagtgtcgtgagtaacacccccactattataacagtagcatcaaaaattcagtcaacatagtat 41911054  T
Q  523 catcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  41911053 catcaattcatcagattaacaagaatacatttaatctaattttatcct 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 24823465 - 24823379
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||||||||  |||||| ||||||| ||||||||||||| | ||||||||||||||||| ||||||| ||| | | |||||||||||    
T  24823465 aaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataatatcaaaagtgttaagtgtaacacccca 24823379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 523 - 567
Target Start/End: Complemental strand, 4132750 - 4132706
Alignment:
Q  523 catcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  4132750 catcaattcatcaaattaacaagactacacttaatctaattttat 4132706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 43025741 - 43025874
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaat-catcatagtatcatcaattcatca 535  Q
    ||||||||||  ||||  ||||||| |||  ||| ||| |||||| | |||||||||||  |||||||||||| | ||| ||| ||||||||||||||||    
T  43025741 tgaagttaacgatatagtatcaaaagtgttgtgattaataccccactctttgtacaatggtattaaaagttcagttcat-ataatatcatcaattcatca 43025839  T
Q  536 cattaacaagactacacttaatctaattttatcct 570  Q
     | ||| |||| |||| ||||||||||||||||||    
T  43025840 gactaagaagaatacatttaatctaattttatcct 43025874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 565
Target Start/End: Original strand, 7998411 - 7998461
Alignment:
Q  515 catagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||||||||||    
T  7998411 cataatatcatcaatacatcagattaacaagaatacacttaatctaatttt 7998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 4133199 - 4133146
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacacta 450  Q
    ||||||||||||||| |||| || ||||||||||||| | ||||||||||||||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacacta 4133146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 34685728 - 34685785
Alignment:
Q  388 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||| |||||||||| |||| ||||||||| ||||||| ||||| |||||||||||    
T  34685728 taaaatgaaggaaaattctatgatgaagttatgagaatgaattttttgatgaagttaa 34685785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 568
Target Start/End: Complemental strand, 1954077 - 1954009
Alignment:
Q  501 aaaagttcaatcatcatagtatc-atcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||  | |||||||||| |||||||||||| ||||| | ||||||||| ||||||||||||||    
T  1954077 aaaagttcagccctcatagtatctatcaattcatcagattaatatgactacactaaatctaattttatc 1954009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 4108972 - 4108924
Alignment:
Q  385 caataaaataaaggaaaattttatggtgaagttataagaatgacttttt 433  Q
    |||||||| ||||||||||||||||||||||| || | |||||||||||    
T  4108972 caataaaagaaaggaaaattttatggtgaagtcatgaaaatgacttttt 4108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 7e-63; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 3655388 - 3655214
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 3655289  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3655288 acatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 3655214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 37203058 - 37203231
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||     
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtgg 37203157  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  37203158 catcaaaagttcagtcctcatagtatcatcaattcataagattaacaagactacacttaatctaattttatcct 37203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 26941446 - 26941272
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatg 26941347  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| || |||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  26941346 acatcaaaagttcagtcctcatggtatcattaattcatcagattaacaagactacacttaatctaattttatcct 26941272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 20373481 - 20373308
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||||||| ||||||| |||||||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatga 20373382  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| |  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20373381 catcaaaagttcagttctcatggtatcatcaattcatcaaattaacaagactacacttaatctaattttatcct 20373308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 37157699 - 37157871
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || | |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||     
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactg-ttgtacagtgg 37157797  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  37157798 catcaaaagttcagtcatcatagtatcatcaatttataagattaacaagactacacttaatctaattttatcct 37157871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 47481510 - 47481683
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||||||||||||||| ||| ||||||  |||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  47481510 aaaggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 47481609  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||| ||||||| |  | ||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  47481610 tgacatcaaaagtttagccctcatagtatcatcaattcatcatgttaacaagactacacttaatataattttat 47481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 40552445 - 40552273
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||| |||  ||||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatg 40552346  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| ||||||||| || ||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  40552345 acatcaaaagttcagtcctcataatatcatcaattcatcagattaacaacactacacttaatttaattttatc 40552273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 443 - 579
Target Start/End: Complemental strand, 42506214 - 42506078
Alignment:
Q  443 taacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaac 542  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaac 42506115  T
Q  543 aagactacacttaatctaattttatcctcctttgcta 579  Q
    |||||||||||||||||||||||||||| | ||||||    
T  42506114 aagactacacttaatctaattttatcctaccttgcta 42506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 51213166 - 51212993
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||| | ||||||||||||| |||||| |||| ||||||||| ||||||||| |||||||||||||     
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatgg 51213067  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||| | || ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  51213066 catcaaaagttgagtcctcatagtatcatcaactcatcagattaacaagactacacttaatataattttatcct 51212993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 48354930 - 48355105
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaat 48355029  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| |  ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  48355030 ggcatcaaaagttcagttctcatagtatcatcaactcatcagattaacaagactacacttagtctaattttatcct 48355105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 390 - 568
Target Start/End: Complemental strand, 21009997 - 21009816
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtt 486  Q
    |||| ||||||||||||||||||||||||||||||||| |||||   |   ||| || ||||||||||||||||| ||||||||||||||||||| | ||    
T  21009997 aaattaaggaaaattttatggtgaagttataagaatgatttttttttttgtgaatttgacactataacatcaaaaatgtaatgagtaacaccccactatt 21009898  T
Q  487 tgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| |||||||| |||||||||  | ||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  21009897 tgtagaatgacatcaaaagttcagccctcatattatcatcaattcatcaggttaacaagactacacttaatataattttatc 21009816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 390 - 565
Target Start/End: Original strand, 35844310 - 35844485
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    ||||||||||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||| ||||| |||  ||||||||||| || |||||||    
T  35844310 aaataaaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgt 35844409  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    ||| |||||| ||||||| | ||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  35844410 acagtgacatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 35844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 52041109 - 52040934
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaat 494  Q
    ||||||||| |  |||||||| || ||||||||||||  | ||||||||| ||||||||||||||| |||| |||||||| |||||| |||||||| | |    
T  52041109 aggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaagtgtagtgagtaactccccaaatgtttgtatagt 52041010  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  52041009 ggcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcct 52040934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 4761838 - 4761661
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||| ||||||||| | || ||| |||||||||   | ||||||||| ||||||| ||||||| |||||||||||||||  || ||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtaca 4761739  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||| ||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  4761738 atgacatcaaaagttcagtcctcatagtatcatcaactcatctgattaacaagactacacttaatctaattttatcct 4761661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 4015451 - 4015624
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||  |||||||||||||||||| |||||||| |||  |||||||||||| | |||||||| | |||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtga 4015550  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| || | ||| ||||||||||||||    
T  4015551 catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagaatataattagtctaattttatcct 4015624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 11466814 - 11466988
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| |||||||||||  | ||||||||||||  ||||||||||| |||||||||||  || |||  |||||||||||||| |||||||||| ||    
T  11466814 aggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacatcgcaagtgttgtgagtaacaccccactgtttgtacagtg 11466913  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| ||||||| | ||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11466914 gcatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 11466988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 380 - 570
Target Start/End: Complemental strand, 54828902 - 54828713
Alignment:
Q  380 acatacaataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 479  Q
    ||||| ||||| || ||| |||||||||||||||||| |||| ||| | ||||| | | |||||||||||||||||| ||||| ||||||||||||||||    
T  54828902 acatataataatattaagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacataaaaat-gtaatgagtaacaccc 54828804  T
Q  480 caatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||  ||||  |||| ||||| |||| |||| || |||||| ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  54828803 caccgtttaaacaacgacatcaaaaattcattcttcatagcatcatcaattcatcatatgaacaagactacacttaatctaattttatcct 54828713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 7327669 - 7327494
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaa-cactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    ||||||||| |||||||||||||| |||||||||||||   ||||||||| |||||||||||||||| |||  |||||||||| ||| | |||||||| |    
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagt 7327570  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||| ||  ||||||||||||||||||||  |||||||||| |||||||||| || |||||||||    
T  7327569 gacatcaaaagttcagtccccatagtatcatcaattcatcggattaacaagaatacacttaatttatttttatcct 7327494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 570
Target Start/End: Complemental strand, 11357535 - 11357376
Alignment:
Q  412 gaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaa-tgtttgtacaatgacattaaaagttcaa 510  Q
    ||||| || ||||||||||||  | |||||||||||||||| |||||||| | || ||||||||||||| | |||||||||| |  ||| |||||||||     
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  511 tcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11357435 tcatcatagtatcatcaattcatcagattaacaagactacatttaatctaattttatcct 11357376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 407 - 568
Target Start/End: Original strand, 29099356 - 29099517
Alignment:
Q  407 atggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt 506  Q
    |||||||||| || ||||||||||||  | |||||||||||||||||||| |||| |||  |||||||||||||| |||||||||| ||||||  |||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagt 29099455  T
Q  507 tcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| ||  | ||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  29099456 tcagtccccttagtatcatcaattcatcatattaacaagaatacacttaatttaattttatc 29099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 43976068 - 43975902
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||||||||||||||| || |||||||||||||   |||||| ||||||||| |||||||| |||| |||||| ||| ||| | ||||||| ||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttt---tgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgaca 43975972  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||| |||| ||||| |||||||||||||||| |||||||| | | |||||||||||||||||||    
T  43975971 tcaaaagtttaatcctcataatatcatcaattcatcagattaacaaaattgcacttaatctaattttatc 43975902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 54505799 - 54505969
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    ||||||||||||| ||||||   |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| | ||| || |||||    
T  54505799 ggaaaattttatgatgaagtcgcaagaatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatga 54505898  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| |||| ||| | | |||||||||||| ||| ||||   |||||||||||||||||||| ||||||||||    
T  54505899 catcaaaaattc-agcctcatagtatcataaatacatcgggttaacaagactacacttaatataattttatc 54505969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 44186687 - 44186513
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| |||| ||||||    ||||||| ||||| | |||||||||||||||| |||||||| |||  |||||||||||||  ||||| |||| ||    
T  44186687 aggaaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtg 44186588  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| ||  ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  44186587 acatcaaaagttcagtccccatagtatcatcaattcatcaaattaacaaaaatacacttaatctaattttatcct 44186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 570
Target Start/End: Complemental strand, 53229350 - 53229164
Alignment:
Q  385 caataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc-caat 483  Q
    |||| ||| |||| ||||||||| |||||||| || | ||| | ||||  | |||| ||||||||||| |||||||| |||| |||| ||||||| ||||    
T  53229350 caattaaaaaaagaaaaattttaaggtgaagtcatgaaaattatttttctggtgaaattaacactatagcatcaaaagtgtagtgagcaacaccctcaat 53229251  T
Q  484 gtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||| |  ||| ||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  53229250 gtttgtacagttgcatcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacagttaatctaattttatcct 53229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 27480564 - 27480391
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||| |||||| || |||||||  |||| | | |||| |||||||||||||||||| | ||||||||| || || | |||||||||  |||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggtga 27480465  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  27480464 catcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttatcct 27480391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 395 - 566
Target Start/End: Original strand, 22450957 - 22451128
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || ||||||| ||||  | |||||| ||||||||| |||||||| |||| |||||| |||| || ||||||||   |    
T  22450957 aaggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggt 22451056  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    | ||| ||||||||| ||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  22451057 ggcatcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaatttta 22451128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 39282642 - 39282816
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | ||||| ||||  ||| || |||||||||||||||||||| |||  ||||||| |||||| ||||| |||| |    
T  39282642 aaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgtg-tgagtaataccccactgtttatacagt 39282740  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| |  ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  39282741 ggcatcaaaagttcagttctcatattatcatccattcatcagattaacaagactacacttaatctaattttatcct 39282816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 46297945 - 46297774
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| | || |||||||||| ||| ||||||||||||| |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| ||  | ||||||||||||||||| | |||||||| ||||||||||||| || ||||||||    
T  46297845 tcaaaagttcagtccccgtagtatcatcaattcattagattaacaaaactacacttaatcaaactttatcct 46297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 33378970 - 33378797
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| |||||  ||||||| ||||||||||||    |||||| |||||||||  ||||||| |||| ||||||  |||||||| |||||||      
T  33378970 aaaggaaaattctatggcaaagttatgagaatgacttttg---tgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacgg 33378874  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||||| ||  |||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  33378873 tgacatcaaaagttcagtccccatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcct 33378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 394 - 570
Target Start/End: Original strand, 34132923 - 34133099
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| |||  |||||| |  | ||||||||||| | |||| |||||||||||  ||||||| |||  |||||||||||||| |||||||||||    
T  34132923 aaaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 34133022  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||||| ||  |||| |||||||||||||||| | ||| |||| |||||||||| ||||||||||||    
T  34133023 tgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcct 34133099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 21193595 - 21193770
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| |||||| |||| || ||||||||||||  | ||||||||||||| |   ||||||| |||  |||||||||||||| |||||||| | |    
T  21193595 aaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagagt 21193694  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||| ||  ||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||    
T  21193695 gacatcaaaagttcagtccccatggtatcattaattcatcagattaacaagaatacatttaatctaattttatcct 21193770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 410 - 569
Target Start/End: Original strand, 40935995 - 40936154
Alignment:
Q  410 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 509  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||   |||||||||| || ||||| |||| |||||| |||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttca 40936094  T
Q  510 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
     || ||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  40936095 gtcctcatagtatcatctattcatcagattaacaagaatacacttaatataattttatcc 40936154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 45174494 - 45174664
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgt--aatgagtaacaccccaatgtttgtacaat 494  Q
    ||||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||||| |||    ||||||||||  || |||||||||| |    
T  45174494 ggaaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaagtgttgtgtgagtaacacttcactgtttgtacagt 45174593  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
      ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||| ||||| |||||||    
T  45174594 agcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacatttaatttaatttt 45174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 2007964 - 2008097
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    |||||||||||||||| | | |||| |||  |||||||||||||| |||||||||| || ||| ||||||||||||  ||||| |||||||||||||||     
T  2007964 tgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcaatccccatagcatcatcaattcatcag 2008063  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||||| || ||||||||||||||||||||    
T  2008064 attaacaagaatatacttaatctaattttatcct 2008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 390 - 570
Target Start/End: Complemental strand, 46994842 - 46994673
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    |||| |||||||||| || ||||||||  ||||||||| ||||| | ||||||||| |||||||||||||||| ||||||||||||||           |    
T  46994842 aaatgaaggaaaattctacggtgaagtcgtaagaatgatttttttggtgaagttaatactataacatcaaaat-gtaatgagtaacaca----------t 46994754  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||    
T  46994753 acaatgacatcaaaagttcagtcctcatagtatcatcaactcatatgattaacaagactacacttaatctaattttatcct 46994673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 24708295 - 24708127
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    ||||||||||||||||||||| | |||||||||||   ||| ||||||||  ||||||||||| || | ||||||||||| || |||  ||||| |||||    
T  24708295 aaaattttatggtgaagttatcaaaatgactttttt--tgatgttaacacg-taacatcaaaactgcagtgagtaacacctcactgt--gtacagtgaca 24708201  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacac--ttaatctaattttatcct 570  Q
    | ||||||||| || |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||    
T  24708200 tcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttttgatctaattttatcct 24708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 400 - 570
Target Start/End: Complemental strand, 22446247 - 22446076
Alignment:
Q  400 aaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    ||||| || |||||||| || | |||||||||||  | ||||||||||| |||| |||||||| | || |||||||||||||| | |||||||| || ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  499 ttaaaagttcaatca-tcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | |||||||||| |  |||||||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  22446148 tcaaaagttcaaaccctcatagtatcatcaattcatcatataaataagactacacttaatctaattttatcct 22446076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 425 - 569
Target Start/End: Original strand, 53176074 - 53176217
Alignment:
Q  425 tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatca 524  Q
    ||||||||  |||||||||||||  |||||||||||| |||  | |||||   || | |||||||||||| |||| ||||||||| || |||||||||||    
T  53176074 tgacttttctgatgaagttaacatcataacatcaaaaatgttgtaagtaatgtcc-actgtttgtacaataacatcaaaagttcagtcctcatagtatca 53176172  T
Q  525 tcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  53176173 tcaattcatcagattaacaagattacacttaatctaattttatcc 53176217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 32373459 - 32373634
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||| ||||| |||| |||||| || ||||||||||||   || |||||||||||||| |||||||| |||  |||||||| || |  ||||||||||    
T  32373459 taaagggaaattctatgatgaagtcatgagaatgacttttccaataaagttaacactatagcatcaaaagtgttgtgagtaactccac--tgtttgtaca 32373556  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     || ||| |||||||| | |   || ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32373557 gtggcatcaaaagttccaccccaatggtatcatcaattcatcatattaacaagaatacacttaatctaattttatcct 32373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 3362284 - 3362419
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    |||||||||||||||| ||||| || | || ||||||||| |||| | |||||||| || ||| ||||||||| || |||| |||||||||||||||||     
T  3362284 tgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagttcactcctcatggtatcatcaattcatcat 3362383  T
Q  537 attaacaagactacac--ttaatctaattttatcct 570  Q
     |||||||||||||||  ||||||||||||||||||    
T  3362384 gttaacaagactacactattaatctaattttatcct 3362419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 44891498 - 44891661
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || |||||||| || | ||||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||| |||         |     
T  44891498 ggaaaattatacggtgaagtcatgaaaatgactttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgt---------gg 44891587  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||| | ||  |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  44891588 catcaaaagtttagtccacatagtatcatcaattaatcagattaacaagaatacacttaatctaattttatcct 44891661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 437 - 568
Target Start/End: Complemental strand, 24489107 - 24488976
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||| ||||||  || |||| |||  |||||||||  ||| |||||| |||||||||| ||||||||| ||  |||| ||||||||||||||||     
T  24489107 tgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagtccccatattatcatcaattcatcag 24489008  T
Q  537 attaacaagactacacttaatctaattttatc 568  Q
    | |||||||| |||||||||||||||||||||    
T  24489007 actaacaagaatacacttaatctaattttatc 24488976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 439 - 570
Target Start/End: Original strand, 38591727 - 38591862
Alignment:
Q  439 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgt----ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatc 534  Q
    ||||||||||||||||||||||||| ||  |||||||| | || |||    |||||||||| ||| ||||||| | ||  |||| ||| ||||| |||||    
T  38591727 aagttaacactataacatcaaaattatagggagtaacatctcattgtattgttgtacaatggcatcaaaagttaagtccacatattattatcaactcatc 38591826  T
Q  535 acattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||||||||||||||||||||||||||||    
T  38591827 agattaacaagactacacttaatctaattttatcct 38591862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 570
Target Start/End: Original strand, 25579731 - 25579903
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||||||||||| ||||||| ||||||| ||||  | ||||||||| |||||| |||||||| |||  ||| |||||  | | | ||| |||| ||||    
T  25579731 gaaaattttatggttaagttatgagaatgatttttctggtgaagttaatactatagcatcaaaagtgttgtgaataacattctactatttatacagtgac 25579830  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| ||  |||| |||||||| || || | |||||||| | |||||||||||||||||||||||    
T  25579831 atcaaaagttcagtccccatattatcatcagtttattagattaacaaaaatacacttaatctaattttatcct 25579903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 468 - 570
Target Start/End: Original strand, 43348320 - 43348421
Alignment:
Q  468 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||| ||||||||| |||||||  | || ||| ||||||||| || |  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43348320 tgagcaacaccccactgtttgtttagtggcatcaaaagttcagtcttt-tagtatcatcaattcatcagattaacaagaatacacttaatctaattttat 43348418  T
Q  568 cct 570  Q
    |||    
T  43348419 cct 43348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 501 - 570
Target Start/End: Original strand, 29163913 - 29163982
Alignment:
Q  501 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||| || || ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  29163913 aaaagttcagtcctcttagtatcatcaattcatcagattaataagaatacacttaatctaattttatcct 29163982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 518 - 570
Target Start/End: Original strand, 33698265 - 33698317
Alignment:
Q  518 agtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33698265 agtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 33698317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 14586735 - 14586682
Alignment:
Q  517 tagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||    
T  14586735 tagtatcatcaattcatcagattaacaagaatacacttaatctaactttatcct 14586682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 22622780 - 22622732
Alignment:
Q  520 tatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  22622780 tatcatcaattcatcagattaacaaaactacacttaatctaattttatc 22622732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 55343473 - 55343405
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    |||||||||||| ||||||||||| |  | ||||||||||  ||||||||||||||||||| |||||||    
T  55343473 taaaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaa 55343405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 432
Target Start/End: Original strand, 53175706 - 53175749
Alignment:
Q  389 aaaataaaggaaaattttatggtgaagttataagaatgactttt 432  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  53175706 aaaaaaaaggaaaattttatggtgaagttatgagaatgactttt 53175749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 440 - 481
Target Start/End: Complemental strand, 41585449 - 41585408
Alignment:
Q  440 agttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacccca 41585408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 11835695 - 11835639
Alignment:
Q  515 catagtatcatcaattcatcacattaacaagactacacttaatctaat-tttatcct 570  Q
    |||||||||||||||| |||| |||||||| | ||||||||||||||| ||||||||    
T  11835695 catagtatcatcaatttatcatattaacaaaaatacacttaatctaatatttatcct 11835639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 481
Target Start/End: Original strand, 33698219 - 33698263
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||    
T  33698219 tgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 2613907 - 2613962
Alignment:
Q  423 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacc 478  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||  |||||||||||    
T  2613907 aatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacacc 2613962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 19606969 - 19606914
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||  | |||||||||    
T  19606969 aaataaatgaaaattctatggtgaagttataaaaatgacttttctggtgaagttaa 19606914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 36012245 - 36012296
Alignment:
Q  514 tcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    ||||| |||||||||||||||| || ||||||| ||||| ||||||||||||    
T  36012245 tcataatatcatcaattcatcagatgaacaagaatacacctaatctaatttt 36012296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 47870211 - 47870262
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    ||||||||||| |||  ||||||||| ||||||||||||| |||||||||||    
T  47870211 aaaggaaaattctatactgaagttatgagaatgactttttcgatgaagttaa 47870262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 492
Target Start/End: Complemental strand, 11835790 - 11835701
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    ||||||| ||||||||||| || ||||||| ||||| | |||||||||||||||     ||||| |||  ||||||||||| || ||||||||||    
T  11835790 gaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactat-----caaaagtgttgtgagtaacacctcactgtttgtaca 11835701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 549
Target Start/End: Complemental strand, 53811729 - 53811695
Alignment:
Q  515 catagtatcatcaattcatcacattaacaagacta 549  Q
    ||||||||||||||||||||| |||||||||||||    
T  53811729 catagtatcatcaattcatcagattaacaagacta 53811695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 29163839 - 29163895
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataac 454  Q
    ||||||||||||||||||| || | ||||| ||||  | ||||||||||||||||||    
T  29163839 gaaaattttatggtgaagtcattaaaatgatttttctggtgaagttaacactataac 29163895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 42665593 - 42665541
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||||||||| |||||||||||||| | ||||| ||||| | |||||||||    
T  42665593 taaaggaaaattctatggtgaagttatgataatgatttttttggtgaagttaa 42665541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 24886098 - 24886277
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttg--gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgta 490  Q
    |||||||||||||||||||||| | || |||||||||||||   | ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  24886098 taaaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgta 24886197  T
Q  491 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||| ||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  24886198 caatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaagactacacttaatctaattttatcct 24886277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 699152 - 699321
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||| |||| | || |||||||||||||| |||||||||| |||||    
T  699152 aaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgaca 699251  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  699252 tcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacacttaatctaattttatc 699321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 22974260 - 22974084
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| |||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  22974260 aaaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaa 22974161  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | |||| |||||||||||  ||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  22974160 taacatcaaaagttcaattctcatattatcatcaactcatcagaataacaagactacacttaatctaattttatcct 22974084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 386 - 568
Target Start/End: Complemental strand, 31705797 - 31705616
Alignment:
Q  386 aataaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgt 485  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||||||||||| ||||| ||||||||||| |  ||    
T  31705797 aataaaataaaagaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgt 31705698  T
Q  486 ttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||||||| |||||| || || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31705697 ttgtacaatgacatcaaaagtccagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatc 31705616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 38528413 - 38528241
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | ||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |    
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagt 38528314  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||| ||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  38528313 gacatcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatc 38528241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 393 - 570
Target Start/End: Complemental strand, 14919708 - 14919530
Alignment:
Q  393 taaaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtac 491  Q
    |||||||||||| ||||||||||| || ||||| | |||||  ||||||||||||| ||||||||||||| |||||||||||||||| || ||||| ||     
T  14919708 taaaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatat 14919609  T
Q  492 aatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||||| ||||||||| || ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  14919608 aatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaaaactacacttaatctaattttatcct 14919530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 388 - 570
Target Start/End: Original strand, 22980784 - 22980966
Alignment:
Q  388 taaaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 487  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||  | ||||||||||||||||  ||||||| |  | ||||||| |||||| |||||    
T  22980784 taaaataatagaaaattttatgatgaagttatgagaatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgttt 22980883  T
Q  488 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |  ||||||||| ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22980884 gagcaatgacatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 22980966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 5112490 - 5112317
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||||||||||||||| || | ||||||||||| | ||||||||| |||||||||| |||| | || |||||||||||||| |||||||||| |    
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagt 5112391  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||| ||||||||| ||  ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  5112390 ggcatcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactatacttaatctaattttatc 5112317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 437 - 576
Target Start/End: Complemental strand, 30969459 - 30969320
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| | ||| ||||||||||| ||||||||| || ||||||||||||||||||||||     
T  30969459 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcag 30969360  T
Q  537 attaacaagactacacttaatctaattttatcctcctttg 576  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  30969359 attaacaagaatacacttaatctaattttatcctactttg 30969320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 9200232 - 9200406
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||||||||||||||| || | ||| ||||||  | ||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||| ||    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtg 9200331  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||| | || || ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  9200332 acatcaaaagtttagtcctcttagtatcatcaattcatcatattaacaagaatacatttaatctaattttatcct 9200406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 8742065 - 8741893
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgtaca 492  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||| || |||||||||    
T  8742065 aaaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtaca 8741966  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    ||| ||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  8741965 atggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacaattaatctaatttt 8741893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 395 - 566
Target Start/End: Original strand, 22255179 - 22255351
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-tgtaatgagtaacaccccaatgtttgtacaa 493  Q
    |||||||| | || |||||||| |||| ||| ||||||| | ||||||||||| |||||||||||||  |||||||||||||||||||  ||||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaa 22255278  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    || ||| ||||||||| |  ||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  22255279 tggcatcaaaagttcagttctcatattatcatcaattcatcagattaacaagactacacttaatctaatttta 22255351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 397 - 569
Target Start/End: Complemental strand, 35511652 - 35511480
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||  ||||||||||| || | |||||| |||  ||||||||||||| ||||||||||| | |||| |||||||||| ||| |||||||| | |||    
T  35511652 ggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtga 35511553  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
    ||| ||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  35511552 catcaaaagttcagtcatcatactatcaccaattcatcagattaacaagactacacttaatctaattttatcc 35511480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 1429321 - 1429147
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||| | ||||||||||| || | ||||||| ||| | |||||||||||||||| |||||||| | || |||||||||||||| |||||||||| ||    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactg 1429222  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| |||| |||| ||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1429221 gcatcaaaaattcagtctccatagtatcatcaattcatcaaattaacaagactacatttaatctaattttatcct 1429147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 15724490 - 15724658
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| | |  |||||||||||||| ||||| ||||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttatacaatga 15724589  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    || | |||||||| ||  |||| |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  15724590 ca-tcaaagttcagtc-ccataatatcatcaattcatcaaattaacaagaatacacttaatttaattttat 15724658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 409 - 570
Target Start/End: Complemental strand, 27318650 - 27318489
Alignment:
Q  409 ggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttc 508  Q
    |||||||| || ||||||| ||||  | |||||||||||||| ||||| |||| |||| |||||||||| ||| ||||||||||||||||| |||||||     
T  27318650 ggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgacatcaaaagttt 27318551  T
Q  509 aatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | |  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27318550 agttctcacagtatcatcaattcatcatattaacaagactacacttaatctaattttatcct 27318489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 31786821 - 31786648
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||| |||||||  | ||||||||||||| | |||||||||||||||| ||| |||| |||| |||| |   ||||| |||||||||| ||     
T  31786821 ggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtgg 31786722  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  31786721 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 31786648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 12910348 - 12910528
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | ||||||||||| | ||||||||| ||||||||||||||| | || || ||||||||||| |||||||||| |    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagt 12910447  T
Q  495 -----gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
         ||||| ||||||||| || |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12910448 acagtgacatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacatgactacacttaatctaattttatcct 12910528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 394 - 570
Target Start/End: Original strand, 19119856 - 19120032
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||| |||    |||||||||||| ||||||||||     
T  19119856 aaaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacag 19119955  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||||| ||  |||||| |||||||||||||| |||||||||| || ||||| ||||||||||||||    
T  19119956 tgacatcaaaagttcagtccccatagtgtcatcaattcatcagattaacaagaataaacttactctaattttatcct 19120032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 398 - 570
Target Start/End: Original strand, 32563150 - 32563322
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| ||||||||||| || | ||||| ||||  ||||||||||||||||||||||||||| |||  |||||||||| ||| ||| |||||| ||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| ||  | || |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32563250 atcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 32563322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 7693230 - 7693401
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || | ||||||||||  | ||||||||||||||||||||||||| |||  ||||||||| |||| |||||||||| ||     
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtgg 7693329  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||| |||||||||||| || ||||||||||||||||| | ||||||| || ||| |||||||||||||||||    
T  7693330 catcaaaagttcaatcctcttagtatcatcaattcattagattaacatgaatacgcttaatctaattttatc 7693401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 23116397 - 23116224
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||| || || | |||||||||||  |||||||||||| ||||||||||||| |||| |||||| ||||||| |||||||||| ||     
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagtgg 23116298  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     || ||||||||| |   ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  23116297 aatcaaaagttcagtttacatagtatcatcaattcatcagattaacaatattacacttaatctaattttatcct 23116224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 27330304 - 27330474
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| |||||||||||  |  |||||||||||  | ||||||||||||||||||||||||| |||  |||||||||||  | ||||||||||||    
T  27330304 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaat 27330401  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    | ||| ||||||||| || |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  27330402 ggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttat 27330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 5837557 - 5837728
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| || |||||| | || ||||||||||||  | ||||| |||||||||| |||||||| |||  |||||||||||||| |||||||||| |||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | |||| |||| ||  ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  5837657 tcaaaatttcagtctccatagtatcatcaattcatcatattaacaagaatacacttaatctaatttaatcct 5837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 22019632 - 22019805
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    ||||| || |||||||||||||| ||||||||||||  | ||||||||| ||||||  ||||||| |||  |||||||||||||| |||||||| | |||    
T  22019632 ggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtga 22019731  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||| | ||  | ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  22019732 catcaaaagttaagtccccttagtatcatcacttcatcatattaacaagaatacacttaatctaattttatcct 22019805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 7209037 - 7208866
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    |||||| || |||||||| |||| |||||||||||  | ||||||||||| | |||||| |||| || || ||||||||||| |  ||||||||| ||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7208937 atcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 7208866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 35826660 - 35826489
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | |||||||||||   ||||||||| ||||||||||||||| |||| ||||||||||  || |||||||||| |    
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagt 35826561  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||| ||||||||| || |||||||||||||| ||||| | |||||||| || ||| |||||||||||||||    
T  35826560 gacatcaaaagttcagtcctcatagtatcatcagttcat-agattaacaataccacatttaatctaattttat 35826489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 36860421 - 36860596
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||  || |||| |||  |||||||||||||| ||||||||||||    
T  36860421 aaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaat 36860520  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  36860521 gacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagagtacatttaatctaattttatcct 36860596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 14409501 - 14409332
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||| ||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| | ||  |||  ||     
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcaccccactcttaatacggtgg 14409402  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  14409401 catcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttat 14409332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 391 - 568
Target Start/End: Complemental strand, 17158214 - 17158035
Alignment:
Q  391 aataaaggaaaattttatggtgaagttataagaatgactttttggat---gaagttaacactataacatcaaaattgtaatgagtaacaccccaatgttt 487  Q
    |||| ||||||||| ||||||||||| |||| ||||| |||||   |   ||||||||||||||||||| |||| ||||||||||||||| |||  ||||    
T  17158214 aatataggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgttt 17158115  T
Q  488 gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||||||||| ||||||||  |||| |||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||    
T  17158114 gtacaatgacatcaaaagttc-gtcattatagtatcattaattcatcagattaacaagactacacttagtataattgtatc 17158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 39572818 - 39572992
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||||||||||||    | ||||||| ||||||| || |||| |||  |||||||||| ||| ||||||| || ||    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtg 39572917  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| |  |||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  39572918 acatcaaaagttcagttctcatagtatcataaattcatcagattaacaagaatacacttaatctaattttatcct 39572992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 405 - 568
Target Start/End: Complemental strand, 43308819 - 43308656
Alignment:
Q  405 ttatggtgaagttataagaatgactttttgga-tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaa 503  Q
    |||||||||||| || |||||||||||||  | | ||||||||| ||||||||||||| |||||||| |||||||| | |||| |||||||| ||| |||    
T  43308819 ttatggtgaagtcatgagaatgactttttttagtaaagttaacattataacatcaaaaatgtaatgaataacaccc-actgttcgtacaatggcatcaaa 43308721  T
Q  504 agttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||| || ||||||||||||||| ||||||  ||||||| |||| ||||||||||||||||||    
T  43308720 agttcagtcctcatagtatcatcaactcatcagcttaacaaaactatacttaatctaattttatc 43308656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 463 - 570
Target Start/End: Original strand, 35504431 - 35504538
Alignment:
Q  463 tgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaat 562  Q
    |||||||||||||||| ||  |||||||  ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  35504431 tgtaatgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtatcatcaattcatcatattaacaagactacacttaatataat 35504530  T
Q  563 tttatcct 570  Q
    ||||||||    
T  35504531 tttatcct 35504538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 410 - 568
Target Start/End: Original strand, 26268087 - 26268245
Alignment:
Q  410 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 509  Q
    ||||||| || ||||||| ||||  | |||||||||||||||| |||||||| |||  |||||||||||||| |||||||||  |||||| ||||||| |    
T  26268087 gtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgacatcaaaagttta 26268186  T
Q  510 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||  ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||    
T  26268187 gtccacatagtatcatcaattcatcagattaacaagaatacaattaatcaaattttatc 26268245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 390 - 567
Target Start/End: Original strand, 8466738 - 8466914
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    |||| |||||||||| |||| ||| || || ||||||||||||  | ||||||||||||| ||||||||||| |||  ||| |||||||||  | |||||    
T  8466738 aaattaaggaaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaagtgttgtgaataacaccccc-tctttgt 8466836  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||| ||  || ||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  8466837 acagtggtatcaaaagttcaatccccatagtatcatcaattcatcaaattaacaagaatacacttaatttaattttat 8466914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 36866762 - 36866935
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |  | ||||| ||||  | ||||||||||||||||| ||||||| | |  |||||||||||||| |||||||||||||     
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 36866861  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||   ||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  36866862 catcaaaagttcagtcccgatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 36866935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 25501099 - 25500928
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||  | | |||||||||||||| |||||||| |||  ||| ||||||| || |||||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||| | ||   |||||||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  25500999 tcaaaagttaagtccctatagtatcatcaattcatcagattaacaagaataaacttaatttaattttatcct 25500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 40133385 - 40133558
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||||| | |||||||||||     
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatgg 40133484  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| ||  |||| ||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  40133485 catcaaaagttcagtccccataatatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 40133558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 409 - 568
Target Start/End: Original strand, 33908245 - 33908404
Alignment:
Q  409 ggtgaagttataagaatga-ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagtt 507  Q
    |||||||| || ||||||| |||| ||| |||||| ||||||||| |||||||| |||| |||||| ||| ||| |||||||||  || ||| |||||||    
T  33908245 ggtgaagtcatgagaatgaactttctgg-tgaagtcaacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagtt 33908343  T
Q  508 caatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || || |||||||||||||||||  ||| |||||||||||| |||||||||||||||||||    
T  33908344 cagtcctcatagtatcatcaattattcagattaacaagactgcacttaatctaattttatc 33908404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 437 - 567
Target Start/End: Complemental strand, 28416662 - 28416532
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||||||| ||||||| | |  ||||||||| |||| |||||||||| ||  || ||||||||||||  | || ||||||||||||||||     
T  28416662 tgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaaagttcaatctccttaatatcatcaattcatcag 28416563  T
Q  537 attaacaagactacacttaatctaattttat 567  Q
    |||||||||| ||||||||||||||||||||    
T  28416562 attaacaagaatacacttaatctaattttat 28416532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 476 - 567
Target Start/End: Complemental strand, 15992636 - 15992545
Alignment:
Q  476 accccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||| |||||||||| |||||| ||||||||| || |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagaatacacttgatctaattttat 15992545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 568
Target Start/End: Complemental strand, 6824599 - 6824483
Alignment:
Q  454 catcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagt--tcaatcatcatagtatcatcaattcatcacattaacaagactaca 551  Q
    |||||||| |||  |||||||||| ||| |||||||||| |||||| ||||||  ||| || ||||||||||||||||| |||| |||||||||| ||||    
T  6824599 catcaaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatcaatttatcagattaacaagaataca 6824500  T
Q  552 cttaatctaattttatc 568  Q
    |||||||||||||||||    
T  6824499 cttaatctaattttatc 6824483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 23954894 - 23954791
Alignment:
Q  468 tgagtaacaccccaatgtttgtacaa-tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    |||||||||||||| ||||| ||| | || ||| ||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23954894 tgagtaacaccccactgtttttactagtggcatcaaaagttcagtttccatagtatcatcaattcatcatattaacaagactacacttaatctaatttta 23954795  T
Q  567 tcct 570  Q
    ||||    
T  23954794 tcct 23954791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 35933901 - 35934063
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||||  ||||||| |||  ||||||||||| || |        | ||    
T  35933901 aggaaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact-------tagtg 35933993  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
     ||| |||||| || ||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  35933994 gcatcaaaagtccagtcaccatagtatcatcaattcatcagattaacaagaatacacttaatctagtttt 35934063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 468 - 570
Target Start/End: Complemental strand, 21088870 - 21088768
Alignment:
Q  468 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||| |||||    
T  21088870 tgagtgacaccccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagaatacatttaatctaactttat 21088771  T
Q  568 cct 570  Q
    |||    
T  21088770 cct 21088768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 410 - 570
Target Start/End: Original strand, 8436979 - 8437138
Alignment:
Q  410 gtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttca 509  Q
    ||||||| || ||||||| ||||| | |||| ||||||||||| | || ||| |||| ||||||||| |||| |||||||||| |||||| |||||||||    
T  8436979 gtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatcaaaagttca 8437078  T
Q  510 atcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     || ||||  |||||||||  ||||| ||| |||| ||||  |||||||||||||||||||    
T  8437079 gtcctcattatatcatcaa-ccatcagatttacaaaactatgcttaatctaattttatcct 8437138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 5829897 - 5830063
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataa----catcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||| || ||||||||  ||| ||||| ||||| | ||||||||||| |||||    ||| |||| ||||||||||||||||| |  |||||||||    
T  5829897 ggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtaca 5829996  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||||| ||||||| | || ||||||||||||||         ||||||||||||||||||||||| ||||||||    
T  5829997 atgacatcaaaagtttagtcctcatagtatcatca---------attaacaagactacacttaatctcattttatc 5830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 439 - 568
Target Start/End: Original strand, 42342775 - 42342902
Alignment:
Q  439 aagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacat 538  Q
    ||||||| ||||||||||||||| |||  ||||||| |||||| ||||| |||| |||||| ||||  |   ||  | ||||||||||||||||||| ||    
T  42342775 aagttaatactataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaaaatt--tccccttagtatcatcaattcatcagat 42342872  T
Q  539 taacaagactacacttaatctaattttatc 568  Q
    |||||||| |||||||||||||||||||||    
T  42342873 taacaagaatacacttaatctaattttatc 42342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 13956522 - 13956425
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtaca 492  Q
    |||||||||| || |||||||| || | ||||||||||   |||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||    
T  13956522 aaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 437 - 552
Target Start/End: Original strand, 25668690 - 25668804
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||| ||||||||||| |||  |||||||||||||| |||||| ||| || ||| ||||||||| ||  | ||||||||||||||||| |     
T  25668690 tgaagttaacact-taacatcaaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtatcatcaattcattag 25668788  T
Q  537 attaacaagactacac 552  Q
    |||||||||| |||||    
T  25668789 attaacaagaatacac 25668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 26317859 - 26317775
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||||||| |||| |||||| || | ||||||||||| | ||||||||||||||||||||||||| | ||| |||||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacccca 26317775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 430 - 481
Target Start/End: Original strand, 22255608 - 22255659
Alignment:
Q  430 ttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22255608 tttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacccca 22255659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 534
Target Start/End: Original strand, 11898004 - 11898139
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    ||||||||| |||||||| || | ||| ||||||  | | ||||||| | |||| |||||||| || | |||||||||||| | |  ||||||| |||||    
T  11898004 aaaattttagggtgaagtcatgataataacttttctggtaaagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgaca 11898103  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatc 534  Q
    | ||||||| | || |||||||||||||||||||||    
T  11898104 tcaaaagtttagtcctcatagtatcatcaattcatc 11898139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 567
Target Start/End: Complemental strand, 13956415 - 13956367
Alignment:
Q  519 gtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  13956415 gtatcatcaattcatcagattaacaaaacttcacttaatctaattttat 13956367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 21320752 - 21320799
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||||||    
T  21320752 gaaaattctatggtgaagtaataaaaatgacttttttgatgaagttaa 21320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 474
Target Start/End: Complemental strand, 16004552 - 16004474
Alignment:
Q  397 ggaaaattttatggtgaagttataagaat-gactttttggatgaagttaacactataacatcaaaattgtaatgagtaa 474  Q
    |||||||| |||||| |||| || ||||| |||||||  | ||||||||||||||||||||||||| |||  |||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 481
Target Start/End: Original strand, 5748478 - 5748519
Alignment:
Q  440 agttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    ||||||||||||||| |||||| | |||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacccca 5748519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 433
Target Start/End: Complemental strand, 12081334 - 12081285
Alignment:
Q  384 acaataaaataaaggaaaattttatggtgaagttataagaatgacttttt 433  Q
    ||||| || ||||| |||||| |||||||||||||| |||||||||||||    
T  12081334 acaattaattaaagaaaaattatatggtgaagttatgagaatgacttttt 12081285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 33551189 - 33551016
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| || |||||||| || |||||||||||||   ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatga 33551090  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33551089 catcaaaagttcggtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 33551016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 37905709 - 37905881
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||| |||||||||||||  |||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatgattttttgg-tgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatga 37905807  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  37905808 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 37905881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 428 - 568
Target Start/End: Complemental strand, 43648416 - 43648277
Alignment:
Q  428 ctttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatca 527  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||||| ||||||||| |||||||||||||||||    
T  43648416 ctttttgg-tgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtatcatca 43648318  T
Q  528 attcatcacattaacaagactacacttaatctaattttatc 568  Q
    | |||||| ||||||||||||||||||||||||||||||||    
T  43648317 actcatcagattaacaagactacacttaatctaattttatc 43648277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 19289524 - 19289353
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| |     |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  19289524 aaaggaaaattctatggtgaagtca-----atgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaa 19289430  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||| | |  ||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  19289429 tgacatcaaaagttaagttctcacagtatcatcaactcatcagattaataagactacacttaatctaattttatcct 19289353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 17071941 - 17071767
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||||||||||||| ||||| |||| | ||||||| | || | |||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatg 17071842  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||  |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17071841 acatcaaaagttcggtattcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 17071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 11366585 - 11366413
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||| | |||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||| | || | |||||| ||||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatg 11366486  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| |||||||||  | ||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||    
T  11366485 acatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacatttaatataattttatc 11366413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 26357577 - 26357750
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||||||||||||||| || | ||||||||||  ||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||| |||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtga 26357676  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| |  | ||||  | |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  26357677 catcaaaagttcagttcttatagagttatcaattcatcatattaacaagatcacacttaatctaattttatcct 26357750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 19424832 - 19424660
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||||||||||||||| || |||||| |||||  | ||||||||||||||||||||||||| |||  |||||||||||||| ||||| || | ||    
T  19424832 aggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtg 19424733  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
     ||| ||||||| | || |||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  19424732 gcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacgcttaatctaattttatc 19424660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 17054300 - 17054126
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| ||  |||||||||||| | ||||||||| ||||||||||||||| |||| | ||||||| | || |||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatg 17054201  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| |||||| |  |  ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  17054200 acatcaaaagtncggtattcataatatcatcaattcatcagattaacaagaccacacttaatctaattttatcct 17054126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 3176941 - 3177110
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||||  | ||||||||||  ||||||||||| ||||||| ||||||| |||  |||||||||| | | ||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||| || |||||||||||||||||||||| | ||| |||| |||||||||||||||||||||    
T  3177041 tcaaaagttcagtcctcatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatc 3177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 29242343 - 29242168
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| || | ||||  ||||| | ||||||||| |||||||||| |||| | || || ||||||||||| |||||||||| |    
T  29242343 aaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagt 29242244  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |  || ||||||||| || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  29242243 ggtatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaaaactacacttaatctaattttatcct 29242168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 4264281 - 4264107
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || | ||||||||||  | | |||||||||||||| |||||||| |||  ||||||||| |||| |||||||||| ||    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 4264182  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| ||  |||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||    
T  4264181 acatcaaaagttcagtctccatagtattatcaattcatcatattaagaagaatacacttaatctaattttatcct 4264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 399 - 565
Target Start/End: Original strand, 36641988 - 36642154
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||  | |||| |||| |||||| |||||||| |||   |||||||||| || |||||||||| |||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    | ||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagaatacacttaatctaatttt 36642154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 39167568 - 39167396
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||||||||||||||| |  ||||||| ||||| |||||||||||||  |||  ||||||| | |  ||||||||||| || ||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaat 39167469  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||| ||||||||| || |||||||||||||||||||| | | |||||||| |||||||| |||||||||||    
T  39167468 gacatcaaaagttcagtcctcatagtatcatcaattcattagagtaacaagaatacacttattctaattttat 39167396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 2325576 - 2325408
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||||||  |||||||||||    ||||||||||| |||||||||| || |||| |||||||||||||| ||||||||||     
T  2325576 aaaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacac 2325477  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    || ||| ||||||||| || |||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtatcatcaa--------attaacaagactacacttaatctaattttatcct 2325408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 43771039 - 43770869
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||| |||  |||||||||||||| ||||| |||| || ||    
T  43771039 aaaattctatggtgaagtcattagaatgattttttgg-tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| ||  | || |||||||||||||||| |||||||||| || ||||||| ||||||||||||    
T  43770940 tcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatatacttaatttaattttatcct 43770869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 568
Target Start/End: Original strand, 13711465 - 13711635
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  ||||||||||||||  ||||||||| ||||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    || ||||||| | ||  ||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  13711565 atcaaaagtttagtccacatggtatcatcaattcatcagattaacaagaatacatttaatctaattttatc 13711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 396 - 569
Target Start/End: Complemental strand, 27350143 - 27349970
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgac-tttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    ||||||||||||||||||||| || | ||| |  ||||| | |||||||||||||||| |||||||| |||  ||||||||||| || |||||||||| |    
T  27350143 aggaaaattttatggtgaagtcattaaaataatattttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagt 27350044  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcc 569  Q
    ||||| ||||||||| ||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27350043 gacatcaaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcc 27349970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 397 - 565
Target Start/End: Original strand, 4478368 - 4478537
Alignment:
Q  397 ggaaaattttatggtgaagttata-agaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    |||||||| ||| ||||||| ||| | |||||  |||| | ||||||||||||||||||||||||| |||  |||||||||| ||| |||||||||| ||    
T  4478368 ggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtg 4478467  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
     ||| ||||||| | || |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  4478468 gcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttt 4478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 395 - 568
Target Start/End: Complemental strand, 31570939 - 31570766
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| |||||||||||||| ||||| ||||||  | |||| ||||||||||||||| |||| |||  | |||||||||||| | ||| || | |    
T  31570939 aaggaaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagt 31570840  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||| ||||||||| ||  ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  31570839 gacatcaaaagttcagtccacatagtatcatgaattcatcagattaacaagaatacacttaatctaattttatc 31570766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 41464051 - 41463882
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||  | |||||||| |||| | ||||||||| ||||||| ||||||| |||  ||||||||||| || |||||||||| || ||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | |||||||||||| |||||||||||||||||||||| |||||||||| |||  ||||| ||||||||||    
T  41463951 tcaaaagttcaatcctcatagtatcatcaattcatcatattaacaagaatacttttaatataattttatc 41463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 4763628 - 4763801
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaaca---ctataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    |||||||| |||| |||||| || | ||||||||||  |||||||||||||   ||||| || ||||| |||| |||||||||||||| ||||||||||     
T  4763628 ggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacag 4763727  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    |||||| ||||||||| |   |||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  4763728 tgacatcaaaagttcagttcccatagtataatcaattcatcagattaacaaaactacacttaatctaattttat 4763801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 399 - 570
Target Start/End: Complemental strand, 33660569 - 33660398
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || | ||||||||||    | ||||||||||||||||||||||| |||  |||||||||||| | |||||||||| || ||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||||||||| || || ||||||||||||||||| | ||||||| || |||||||||||||||||||||||    
T  33660469 tcaaaagttcagtcctcttagtatcatcaattcattagattaacaggaatacacttaatctaattttatcct 33660398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 570
Target Start/End: Original strand, 4166920 - 4167095
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| ||||||||||| |  | ||||||||||  | ||||||||||| ||||  ||||||| | |  |||||||||||||| ||||||||||||    
T  4166920 aaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaat 4167019  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    | ||| ||||||||| ||  |||||||||| |||||||||| | |||||||| |||| ||||||||||||||||||    
T  4167020 ggcatcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcct 4167095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 397 - 570
Target Start/End: Original strand, 33902068 - 33902239
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||| ||||||  | ||||||||||||  | ||||||||||||||  |||| |||| |||| ||||||| |||||| |||||||| |||||    
T  33902068 ggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacacta--acataaaaaatgtagtgagtaataccccactgtttgtaaaatga 33902165  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || ||| |||||||||| ||||||| ||||||||||||| | |||||| |||||||||||    
T  33902166 catcaaaagttcagtcctcaaagtatcatcagttcatcagattaacaagactatatttaatcgaattttatcct 33902239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 397 - 566
Target Start/End: Original strand, 19313852 - 19314020
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| ||||||||||| || ||||||||||||  | ||||||||||| |||| |||||||| |||  |||||||||||  | | ||| |||| |||    
T  19313852 ggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtga 19313951  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    ||| ||||||||| || | |||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  19313952 catcaaaagttcagtcct-atagtatcatcaattcatcagattaacaagaatacacttaatcgaatttta 19314020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 35958909 - 35959021
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||| |||||| |||| ||||||||||| | |||||||  ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatga 35959008  T
Q  497 cattaaaagttca 509  Q
    |||||||||||||    
T  35959009 cattaaaagttca 35959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 570
Target Start/End: Complemental strand, 33709395 - 33709262
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||| |||| ||||| |||||| ||||||||| ||  |||||||||||||| |  |||     
T  33709395 tgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtatcatcaaatattcag 33709296  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||||| ||| |||||||||||||||||||    
T  33709295 attaacaagaatacgcttaatctaattttatcct 33709262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 568
Target Start/End: Original strand, 44913662 - 44913834
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgtacaatg 495  Q
    |||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  ||||||| |||  ||||||||||| || | ||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttatg-tgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  496 acattaaaagttcaatcatc-atagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| ||||||||||||  | |||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  44913761 acataaaaagttcaatcccccatagtatcatcaattcatcagactaacaagaatacacttaatctaattttatc 44913834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 494 - 570
Target Start/End: Original strand, 45327817 - 45327893
Alignment:
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  45327817 tgacatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcct 45327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 396 - 564
Target Start/End: Original strand, 5881533 - 5881706
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaat-----tgtaatgagtaacaccccaatgtttgta 490  Q
    ||||||||||||| ||||||| || | ||||||||||  | ||||||| | | |||||||||||||      |||  |||||||||||||| ||||||||    
T  5881533 aggaaaattttattgtgaagtcattaaaatgacttttctggtgaagttgatattataacatcaaaacaaaagtgttgtgagtaacaccccactgtttgta 5881632  T
Q  491 caatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattt 564  Q
    || |||||| ||||||| | ||  | ||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  5881633 cagtgacatcaaaagttgagtccccttagtatcatcaattcatcatattaacaagaatacatttaatctaattt 5881706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 41960939 - 41961013
Alignment:
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41960939 acatcaaaagttcagtccacatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcct 41961013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 18494474 - 18494310
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| | ||||||||| || | ||||||||||  | |||||||||||||||| |||||||| |||  ||||||||||||||                
T  18494474 aaaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac----------- 18494386  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||||| ||||||||| || |||||||||||||||||||||| ||| || ||| ||||||| |||||||||||||||    
T  18494385 -gacatcaaaagttcagtcctcatagtatcatcaattcatcagattcactagaatacacttgatctaattttatcct 18494310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 501 - 566
Target Start/End: Original strand, 31861956 - 31862021
Alignment:
Q  501 aaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttta 566  Q
    |||| |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31861956 aaaatttcagtcattatagtatcatcaattcatcagattaacaagactacacttaatctaatttta 31862021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 567
Target Start/End: Original strand, 44285951 - 44286119
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| || |||||||| ||  |||||| ||||  |||||||||||||||||| |||||||| |||   ||| || | | || |||||||| | || ||    
T  44285951 aaaattatacggtgaagtcatgcgaatgatttttctgatgaagttaacactatagcatcaaaagtgttgcgagcaatatctcactgtttgtatagtggca 44286050  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    | ||||||| | ||  ||||||||||| ||||||||| |||||||| | ||||||||||||||||||||    
T  44286051 tcaaaagtttagtccacatagtatcataaattcatcagattaacaataatacacttaatctaattttat 44286119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 41960881 - 41960947
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    |||||||||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||    
T  41960881 aaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 568
Target Start/End: Complemental strand, 7007053 - 7006953
Alignment:
Q  468 tgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||| |||| |||||||||| |  ||| ||||||| | |   |||||||||||||||| || | |||||||||| ||||||||||||||||||||    
T  7007053 tgagtaacatcccactgtttgtacagtagcatcaaaagtttagttcccatagtatcatcaatttataagattaacaagaatacacttaatctaattttat 7006954  T
Q  568 c 568  Q
    |    
T  7006953 c 7006953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 479
Target Start/End: Original strand, 41465509 - 41465591
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccc 479  Q
    |||||||| ||||||||||| || ||||||||||||  | |||||||||||||||| |||||||  |||| |||||| |||||    
T  41465509 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaggtgtagtgagtagcaccc 41465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 19501823 - 19501764
Alignment:
Q  516 atagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||| || |||||    
T  19501823 atagtatcatcaattcatcagattaacaa-actacatttaatctaattttattctactttg 19501764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 31861895 - 31861961
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaatt 463  Q
    |||||||| |||||||||||||| ||||||||||||| | ||||||||| | ||| | |||||||||    
T  31861895 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaatattatgatatcaaaatt 31861961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 18514819 - 18514771
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||||||||| ||||||| || ||||||||||||| |||||||||||    
T  18514819 ggaaaattttatagtgaagtcatgagaatgacttttttgatgaagttaa 18514771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 39788626 - 39788590
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttt 432  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39788626 aggaaaattttatggtgaagtcataagaatgactttt 39788590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 22963400 - 22963435
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttt 432  Q
    |||||||||||||||||||| |||||||||||||||    
T  22963400 ggaaaattttatggtgaagtcataagaatgactttt 22963435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Complemental strand, 22998077 - 22998042
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttt 432  Q
    |||||||||||||||||||| |||||||||||||||    
T  22998077 ggaaaattttatggtgaagtcataagaatgactttt 22998042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 542
Target Start/End: Complemental strand, 41051382 - 41051263
Alignment:
Q  424 atgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa-tgacattaaaagttcaatcatcatagtat 522  Q
    |||||||||  ||||||| ||| |||||| |||||||| |||  ||  ||||||  || | ||||||| | || ||| ||||||||| || |||||||||    
T  41051382 atgacttttctgatgaagctaatactatagcatcaaaagtgttgtgtataacacttcactatttgtaccagtggcatcaaaagttcagtcctcatagtat 41051283  T
Q  523 catcaattcatcacattaac 542  Q
    ||||||||||||| ||||||    
T  41051282 catcaattcatcagattaac 41051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 19093407 - 19093461
Alignment:
Q  391 aataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||||||||||||||||||||||| || ||||||| ||||  | |||||||||    
T  19093407 aataaaggaaaattttatggtgaagtcatgagaatgatttttctggtgaagttaa 19093461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 523 - 564
Target Start/End: Original strand, 35959023 - 35959064
Alignment:
Q  523 catcaattcatcacattaacaagactacacttaatctaattt 564  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  35959023 catcaattcatcatattaacaagactgcacttaatataattt 35959064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 444
Target Start/End: Complemental strand, 43446511 - 43446463
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagtta 444  Q
    ||||||||| ||||||||||| || ||||||||||||| | ||||||||    
T  43446511 aggaaaattctatggtgaagtcatgagaatgactttttcggtgaagtta 43446463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 6e-54; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 394 - 565
Target Start/End: Complemental strand, 4319010 - 4318839
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    ||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||     
T  4319010 aaaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacag 4318911  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    |||||| |||||||||| |  ||||||||||||||||||| | |||||||||| ||||||||||||||||||    
T  4318910 tgacatcaaaagttcaacccccatagtatcatcaattcattagattaacaagaatacacttaatctaatttt 4318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 1945831 - 1946005
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttg-gatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaa 493  Q
    |||||||||| || |||||||| ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  1945831 aaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaa 1945930  T
Q  494 tgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||||| |||||||||  | |||||||||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  1945931 tgacatcaaaagttcagccctcatagtatcatgaattcatcaagttaacaagactacacttaatataattttatc 1946005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 395 - 568
Target Start/End: Original strand, 5627389 - 5627562
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaat 494  Q
    |||||||||| || |||||||| |||||||||||||||| | |||||||||||||||||||| |||| | ||||||||||||||||| | |||||| |||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaat 5627488  T
Q  495 gacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    ||||| |||||||||  | ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||    
T  5627489 gacatcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatc 5627562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 396 - 568
Target Start/End: Complemental strand, 7055400 - 7055228
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||||||| |||| | |||| ||||||||| || | |||||| ||||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatg 7055301  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |||| |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  7055300 acatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 7055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 7235218 - 7235046
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||||||||||| ||||||||||||  | |||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||  ||     
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtgc 7235119  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| ||||||||| || ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||    
T  7235118 catcaaaagttcagtc-tcatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcct 7235046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 390 - 570
Target Start/End: Original strand, 29182156 - 29182336
Alignment:
Q  390 aaataaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgt 489  Q
    |||| ||| |||||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||| |||  |||||||||||||| ||||| |    
T  29182156 aaattaagaaaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttat 29182255  T
Q  490 acaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||| || ||| ||||||||| ||  |||| |||||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  29182256 acagtgtcatcaaaagttcagtctccatattatcatcaattcatcagattaataagaatacacttaatctaattttatcct 29182336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 396 - 565
Target Start/End: Original strand, 8513232 - 8513401
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| || ||||||||||||  | ||||||||||||||||| ||||||| |||  |||||||||||||| |||||||||| ||    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 8513331  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    |||| ||||||||| ||  |||| |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  8513332 acatcaaaagttcagtccccataatatcatcaattcatcatattaacaagaatacacttgatctaatttt 8513401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 397 - 570
Target Start/End: Complemental strand, 33893186 - 33893014
Alignment:
Q  397 ggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatga 496  Q
    |||||||| |||||| |||| || ||||| | |||||   ||||||||||||||||||||||||| |||  |||||||||||||| | ||||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatga 33893087  T
Q  497 cattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     |||||||||||| ||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  33893086 tattaaaagttcagtc-ccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 33893014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 3880124 - 3879950
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |  ||||||||||||  | ||||||||||| ||||  ||||||| |||  |||||||||||| | |||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatg 3880025  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    |||| ||||||||||||  ||||||||||||||||||||| | |||||||| || ||||| ||||||||||||||    
T  3880024 acatcaaaagttcaatccccatagtatcatcaattcatcagactaacaagaatatacttattctaattttatcct 3879950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 413 - 570
Target Start/End: Original strand, 15491631 - 15491788
Alignment:
Q  413 aagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatc 512  Q
    ||||||| ||||||||||||    ||||||||||| | ||||||||||| |||  |||||||||||||| | |||||||| || ||| |||||||||  |    
T  15491631 aagttatgagaatgacttttctcgtgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagcc 15491730  T
Q  513 atcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  15491731 ctcatagtatcatcaattcatcagattaacaagaatgcacttaatctaattttatcct 15491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 565
Target Start/End: Original strand, 6088910 - 6089076
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||| ||||  | ||||||||||||||||  ||||||| |||  |||||||| ||||| |||||||| | || ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaatttt 565  Q
    | ||||||||| ||| ||||||||||||||||||||| |||||||||| ||  ||| ||||||||||    
T  6089010 tcaaaagttcagtcaccatagtatcatcaattcatcagattaacaagaatatccttgatctaatttt 6089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 30353540 - 30353371
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| ||||||||||| || ||||||||||||  | ||||||||||| ||||||||||||| |||   |||||| | | || |||||||||| || ||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    |  | |||||| ||  ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  30353440 tcgatagttcagtctccatagtatcatcaattcatcatataaacaagaatacacttaatctaattttatc 30353371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 423 - 570
Target Start/End: Complemental strand, 21017270 - 21017123
Alignment:
Q  423 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 522  Q
    ||||||||||| | ||||||||||| | ||  || |||| |||  |||||||||||||| | ||||||||||| ||| ||||||||| ||  ||||||||    
T  21017270 aatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggcatcaaaagttcagtccccatagtat 21017171  T
Q  523 catcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
    ||||||||||||| | |||||||| || ||||||||||||||||||||    
T  21017170 catcaattcatcagactaacaagaataaacttaatctaattttatcct 21017123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 451 - 568
Target Start/End: Complemental strand, 6091313 - 6091196
Alignment:
Q  451 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactac 550  Q
    |||||| |||| |||| |||||||||| ||| ||||||||||||| ||| ||||||||| |  || ||||||||||||||||| | |||||||| |||||    
T  6091313 taacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccatcaaaagttcagtactcgtagtatcatcaattcattagattaacaaaactac 6091214  T
Q  551 acttaatctaattttatc 568  Q
    ||||||||||||||||||    
T  6091213 acttaatctaattttatc 6091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 33618874 - 33619007
Alignment:
Q  437 tgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcac 536  Q
    |||||| ||||||||  |||||||| |||| |||||| || |||| | |||||||  || ||| ||||||||| |  ||||||||||||||||||||||     
T  33618874 tgaagtcaacactatcgcatcaaaagtgtagtgagtagcaacccattatttgtacggtggcatcaaaagttcagttctcatagtatcatcaattcatcag 33618973  T
Q  537 attaacaagactacacttaatctaattttatcct 570  Q
    |||||||||||| |||||||||||||||||||||    
T  33618974 attaacaagactgcacttaatctaattttatcct 33619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 576
Target Start/End: Original strand, 20768087 - 20768261
Alignment:
Q  398 gaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgac 497  Q
    ||||||| ||||||||||| || ||||||||||||  | |||||| ||||||||| |||||||| |||| |||||| || || | |||||||  | || |    
T  20768087 gaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcatcc-attgtttgtt-agtggc 20768184  T
Q  498 attaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcctcctttg 576  Q
    || ||||||||| || |||||||||||| ||||||||| |||||||||| |  |||||||||||||||||||| |||||    
T  20768185 atcaaaagttcagtcctcatagtatcattaattcatcagattaacaagatt--acttaatctaattttatcctactttg 20768261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 528
Target Start/End: Original strand, 18498430 - 18498565
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaaca-ccccaatgtttgtaca 492  Q
    ||||||||| | ||| ||||||| || |||||||||||   | ||||||||||| |||| |||||||| |||| |||| |||| |||||  |||||||||    
T  18498430 aaaggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtaca 18498529  T
Q  493 atgacattaaaagttcaatcatcatagtatcatcaa 528  Q
     || ||| ||||||||| || |||||||||||||||    
T  18498530 gtggcatcaaaagttcagtcctcatagtatcatcaa 18498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 19631747 - 19631797
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaa 445  Q
    |||||||||| ||||||||||| |||||||||||||||  | |||||||||    
T  19631747 aaggaaaattctatggtgaagtcataagaatgacttttctggtgaagttaa 19631797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 399 - 568
Target Start/End: Original strand, 43959 - 44128
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  44059 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 44128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 154828 - 154659
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| |||||||||||  |||||| |||||||| | |||||||||| |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | ||||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  154728 taaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 154659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 399 - 568
Target Start/End: Complemental strand, 146199 - 146030
Alignment:
Q  399 aaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgaca 498  Q
    |||||| || |||||||| |||||||||| ||||| | | ||||||||| |||||||| |||| ||||||||||||||||||| | |||||| |||||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  499 ttaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatc 568  Q
    | |||||||||  | ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  146099 tcaaaagttcagccttcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatc 146030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 423 - 567
Target Start/End: Complemental strand, 94542 - 94398
Alignment:
Q  423 aatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtat 522  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| || ||| |||||||   ||  |||| |||    
T  94542 aatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtttggtccccatactat 94443  T
Q  523 catcaattcatcacattaacaagactacacttaatctaattttat 567  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||    
T  94442 catcaattcatgagattaacaagactacacttaatttaattttat 94398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 396 - 570
Target Start/End: Original strand, 133 - 307
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaatgtttgtacaatg 495  Q
    ||||||||| ||||||||||| |  | ||||||||||  | ||||||||||||| ||  || |||| |||  |||||||||| ||| |||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatg 232  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
     ||| ||||||||| || |||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||    
T  233 gcatcaaaagttcagtcctcatagtatcatcaattcatcagactaacaagaatacatttaatctaattttatcct 307  T

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Target: scaffold0002; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 451 - 570
Target Start/End: Complemental strand, 408559 - 408441
Alignment:
Q  451 taacatcaaaattgtaatgagtaacaccccaatgtttgtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactac 550  Q
    ||||||||||| ||||||||||||||||  |  ||||||| ||||| || ||||||||| || || ||||||||||||||||||| ||||||||||||||    
T  408559 taacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactac 408461  T
Q  551 acttaatctaattttatcct 570  Q
    ||||||||||||||||||||    
T  408460 acttaatctaattttatcct 408441  T

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Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 449
Target Start/End: Complemental strand, 408756 - 408702
Alignment:
Q  395 aaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacact 449  Q
    |||||||||| ||||||||||| |||| ||||| ||||| | |||||||||||||    
T  408756 aaggaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacact 408702  T

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Target: scaffold0318 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 570
Target Start/End: Original strand, 11908 - 12082
Alignment:
Q  399 aaaattttatggtgaagttataagaa-tgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacaccccaat-gtttgta-caatg 495  Q
    |||||| ||||||||||| || |||| ||||||||  | |||| ||||||| ||||||| |||| |||  ||||||||||||| || ||||||| || ||    
T  11908 aaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaagtgttgtgagtaacacccccattgtttgtatcagtg 12007  T
Q  496 acattaaaagttcaatcatcatagtatcatcaattcatcacattaacaagactacacttaatctaattttatcct 570  Q
      || ||||||||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  12008 gtatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagaatacacttaatctaattttatcct 12082  T

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Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 445 - 570
Target Start/End: Original strand, 267331 - 267457
Alignment:
Q  445 acactataacatcaaaattgtaatgagtaacaccccaatgttt-gtacaatgacattaaaagttcaatcatcatagtatcatcaattcatcacattaaca 543  Q
    |||||||| |||||||| | || ||||||||| || | ||||| ||||| || ||| ||||||||| ||   ||| |||||||||||||| | |||| ||    
T  267331 acactatagcatcaaaaatatagtgagtaacatccaactgttttgtacagtgtcatcaaaagttcagtctctataatatcatcaattcattagattagca 267430  T
Q  544 agactacacttaatctaattttatcct 570  Q
    |||||||||||||||||||||||||||    
T  267431 agactacacttaatctaattttatcct 267457  T

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Target: scaffold0009 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 42347 - 42432
Alignment:
Q  396 aggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaattgtaatgagtaacacccca 481  Q
    ||||||||||||||||||||| || ||||| | ||||  | ||||||||||||||||||||||||| |||  ||||||||||||||    
T  42347 aggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccca 42432  T

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Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 100818 - 100885
Alignment:
Q  394 aaaggaaaattttatggtgaagttataagaatgactttttggatgaagttaacactataacatcaaaa 461  Q
    ||||||||||| ||||||||||| || ||||||| ||||| | |||||||||| ||||||||||||||    
T  100818 aaaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaa 100885  T

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