View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5261_high_17 (Length: 251)
Name: NF5261_high_17
Description: NF5261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5261_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 42029573 - 42029339
Alignment:
| Q |
1 |
ttgttggaaggtgcaatggggttcaacctactcatcaagcagcagttgcaacctagactgctagagctggtcaccttttacaaagaagagaaagcagata |
100 |
Q |
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| T |
42029573 |
ttgttggaaggtgcaatggggttcaacctactcatcaagcagcagttgcaatctagactgctagagctggtcaccttttacaaagaagagaaagcagata |
42029474 |
T |
|
| Q |
101 |
tgattatgaatctagtcacttgattagttttatcaaattactacttaaaagtctaattattggatggaaagaaaaactaaattttaatcttaatatcagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42029473 |
tgattatgaatctagtcacttgattagttttatcaaattactacttaaaagtctaataattggatggaaagaaaaactaaattttaatcttaatatcagg |
42029374 |
T |
|
| Q |
201 |
ttcatgaaattgtaagataccaaatcagtgataag |
235 |
Q |
| |
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|||||||||||||||||| |||||||||||||||| |
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| T |
42029373 |
ttcatgaaattgtaagatgccaaatcagtgataag |
42029339 |
T |
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