View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5261_high_8 (Length: 409)

Name: NF5261_high_8
Description: NF5261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5261_high_8
NF5261_high_8
[»] chr7 (84 HSPs)
chr7 (129-234)||(39730933-39731038)
chr7 (129-235)||(48408397-48408503)
chr7 (129-234)||(21646538-21646643)
chr7 (129-234)||(18409294-18409399)
chr7 (129-234)||(43504616-43504721)
chr7 (130-234)||(18414171-18414275)
chr7 (124-234)||(2479850-2479960)
chr7 (124-234)||(47264157-47264267)
chr7 (129-234)||(24789426-24789531)
chr7 (131-235)||(44847618-44847722)
chr7 (131-225)||(21640321-21640415)
chr7 (129-234)||(21983762-21983867)
chr7 (155-234)||(1532884-1532963)
chr7 (129-235)||(25767441-25767541)
chr7 (131-225)||(2058503-2058596)
chr7 (131-225)||(20357036-20357130)
chr7 (130-235)||(21989427-21989532)
chr7 (157-225)||(4873645-4873713)
chr7 (157-225)||(12406781-12406849)
chr7 (157-225)||(31109078-31109146)
chr7 (131-225)||(12397390-12397484)
chr7 (141-235)||(32060797-32060889)
chr7 (141-234)||(6592830-6592921)
chr7 (141-236)||(6595046-6595139)
chr7 (157-235)||(1562511-1562588)
chr7 (141-234)||(20343500-20343592)
chr7 (142-227)||(21811745-21811829)
chr7 (157-222)||(24023830-24023895)
chr7 (158-234)||(18392705-18392780)
chr7 (179-225)||(79958-80004)
chr7 (355-397)||(4226263-4226305)
chr7 (355-397)||(10600195-10600237)
chr7 (355-397)||(18087586-18087628)
chr7 (159-225)||(24260829-24260895)
chr7 (355-397)||(25628616-25628658)
chr7 (355-397)||(42618049-42618091)
chr7 (129-190)||(1532947-1533008)
chr7 (355-400)||(5455962-5456007)
chr7 (358-397)||(25453377-25453416)
chr7 (354-397)||(27480666-27480709)
chr7 (358-397)||(42618160-42618199)
chr7 (159-221)||(16880586-16880648)
chr7 (159-221)||(16885441-16885503)
chr7 (355-397)||(18086427-18086469)
chr7 (355-397)||(22661495-22661537)
chr7 (355-397)||(23058675-23058717)
chr7 (355-397)||(25628724-25628766)
chr7 (355-397)||(27480125-27480167)
chr7 (355-397)||(32068234-32068276)
chr7 (355-397)||(32934486-32934528)
chr7 (355-397)||(33808461-33808503)
chr7 (355-397)||(43124400-43124442)
chr7 (355-397)||(45914662-45914704)
chr7 (355-397)||(46205555-46205597)
chr7 (356-397)||(25453266-25453307)
chr7 (355-396)||(32934594-32934635)
chr7 (355-400)||(47945483-47945528)
chr7 (355-400)||(47950913-47950958)
chr7 (356-400)||(4227093-4227137)
chr7 (357-397)||(23058567-23058607)
chr7 (354-397)||(18855901-18855944)
chr7 (355-398)||(33828220-33828263)
chr7 (179-225)||(46515810-46515857)
chr7 (355-397)||(12228523-12228565)
chr7 (355-397)||(13384640-13384682)
chr7 (355-397)||(22081697-22081739)
chr7 (355-397)||(28890717-28890759)
chr7 (355-397)||(32068342-32068384)
chr7 (355-397)||(47558168-47558210)
chr7 (179-220)||(49092241-49092282)
chr7 (357-397)||(29144232-29144272)
chr7 (357-397)||(32687535-32687575)
chr7 (357-397)||(43266514-43266554)
chr7 (357-397)||(46204559-46204599)
chr7 (179-234)||(18390508-18390562)
chr7 (1-35)||(3830078-3830112)
chr7 (355-397)||(12643238-12643280)
chr7 (359-397)||(12644057-12644095)
chr7 (159-221)||(24265689-24265751)
chr7 (355-397)||(27138187-27138229)
chr7 (355-397)||(32688466-32688508)
chr7 (355-397)||(43266404-43266446)
chr7 (355-392)||(47558987-47559024)
chr7 (361-397)||(22081811-22081847)
[»] chr2 (51 HSPs)
chr2 (129-234)||(32289148-32289253)
chr2 (129-235)||(3492272-3492378)
chr2 (129-235)||(25410161-25410267)
chr2 (129-234)||(40739352-40739457)
chr2 (129-234)||(30832921-30833026)
chr2 (129-235)||(4484818-4484924)
chr2 (129-234)||(6266274-6266379)
chr2 (131-225)||(9295870-9295964)
chr2 (131-225)||(14292023-14292117)
chr2 (131-225)||(11098395-11098489)
chr2 (157-225)||(39811485-39811553)
chr2 (157-225)||(44310479-44310547)
chr2 (142-225)||(32247262-32247344)
chr2 (141-235)||(12647876-12647968)
chr2 (174-235)||(28258668-28258729)
chr2 (179-225)||(8389632-8389678)
chr2 (181-225)||(33528106-33528150)
chr2 (182-225)||(20522794-20522837)
chr2 (174-225)||(36757426-36757477)
chr2 (355-397)||(6588821-6588863)
chr2 (355-397)||(8710606-8710648)
chr2 (355-397)||(8710714-8710756)
chr2 (179-225)||(10706734-10706780)
chr2 (355-397)||(11830502-11830544)
chr2 (355-397)||(15604585-15604627)
chr2 (179-225)||(21630514-21630560)
chr2 (179-225)||(39483446-39483492)
chr2 (355-400)||(25624353-25624398)
chr2 (124-171)||(28258713-28258760)
chr2 (355-397)||(8342325-8342367)
chr2 (355-397)||(15604477-15604519)
chr2 (355-397)||(20983181-20983223)
chr2 (355-397)||(21103219-21103261)
chr2 (179-225)||(23077953-23077999)
chr2 (355-397)||(25623426-25623468)
chr2 (355-397)||(29957955-29957997)
chr2 (355-397)||(29958467-29958509)
chr2 (185-234)||(19344961-19345010)
chr2 (356-397)||(41587372-41587413)
chr2 (159-234)||(19349793-19349868)
chr2 (180-235)||(33118696-33118751)
chr2 (355-397)||(20982662-20982704)
chr2 (355-397)||(39936495-39936537)
chr2 (355-397)||(41588304-41588346)
chr2 (355-400)||(25230237-25230282)
chr2 (356-395)||(202605-202644)
chr2 (182-225)||(13569902-13569945)
chr2 (1-35)||(7206135-7206169)
chr2 (1-35)||(22608537-22608571)
chr2 (355-400)||(199143-199188)
chr2 (1-34)||(26999121-26999154)
[»] scaffold0188 (1 HSPs)
scaffold0188 (129-237)||(17428-17536)
[»] chr3 (125 HSPs)
chr3 (124-235)||(37726189-37726300)
chr3 (129-235)||(26928079-26928185)
chr3 (129-234)||(23198425-23198530)
chr3 (129-234)||(23200624-23200729)
chr3 (129-234)||(33386137-33386242)
chr3 (124-234)||(37408036-37408146)
chr3 (129-234)||(7782607-7782712)
chr3 (129-234)||(27453476-27453581)
chr3 (235-328)||(35766359-35766452)
chr3 (129-234)||(800685-800790)
chr3 (129-234)||(1306499-1306604)
chr3 (131-225)||(40372264-40372358)
chr3 (131-225)||(22172670-22172764)
chr3 (134-225)||(8477903-8477994)
chr3 (131-225)||(7167780-7167874)
chr3 (131-225)||(28501160-28501254)
chr3 (144-225)||(18656940-18657021)
chr3 (157-225)||(28503327-28503395)
chr3 (129-235)||(6716084-6716189)
chr3 (141-234)||(3617034-3617125)
chr3 (141-234)||(4599016-4599107)
chr3 (141-234)||(4601237-4601328)
chr3 (141-234)||(54634710-54634802)
chr3 (174-234)||(27974433-27974493)
chr3 (143-226)||(10055812-10055894)
chr3 (143-226)||(10058034-10058116)
chr3 (143-226)||(10060256-10060338)
chr3 (143-226)||(10062478-10062560)
chr3 (143-226)||(10064700-10064782)
chr3 (143-226)||(10066922-10067004)
chr3 (132-222)||(27352092-27352182)
chr3 (156-225)||(36029639-36029708)
chr3 (157-237)||(25637010-25637089)
chr3 (174-234)||(32143868-32143928)
chr3 (143-234)||(10208778-10208867)
chr3 (143-234)||(10210978-10211067)
chr3 (179-225)||(21711771-21711817)
chr3 (179-225)||(30709267-30709313)
chr3 (159-227)||(2672425-2672493)
chr3 (159-227)||(2676581-2676649)
chr3 (174-234)||(27985957-27986017)
chr3 (179-234)||(39032017-39032072)
chr3 (355-398)||(40788557-40788600)
chr3 (183-225)||(1730917-1730959)
chr3 (355-397)||(3469338-3469380)
chr3 (355-397)||(3469446-3469488)
chr3 (355-397)||(13948918-13948960)
chr3 (179-225)||(16264899-16264945)
chr3 (179-221)||(27027276-27027318)
chr3 (157-235)||(27038589-27038667)
chr3 (129-171)||(27986001-27986043)
chr3 (355-397)||(29118676-29118718)
chr3 (159-225)||(32475997-32476063)
chr3 (159-225)||(32480855-32480921)
chr3 (355-397)||(32716387-32716429)
chr3 (355-397)||(35643989-35644031)
chr3 (179-221)||(40734087-40734129)
chr3 (355-397)||(40788666-40788708)
chr3 (182-225)||(8738550-8738593)
chr3 (182-225)||(9090788-9090831)
chr3 (124-171)||(27974477-27974524)
chr3 (182-225)||(40592253-40592296)
chr3 (179-234)||(40845224-40845279)
chr3 (355-397)||(1756688-1756730)
chr3 (355-397)||(2944051-2944093)
chr3 (355-397)||(2944586-2944628)
chr3 (355-397)||(3596355-3596397)
chr3 (355-397)||(11026552-11026594)
chr3 (129-225)||(24694656-24694754)
chr3 (355-397)||(29686079-29686121)
chr3 (129-171)||(32143842-32143884)
chr3 (355-397)||(32306670-32306712)
chr3 (355-397)||(35759049-35759091)
chr3 (179-225)||(35926060-35926105)
chr3 (355-397)||(37249718-37249760)
chr3 (355-397)||(41422110-41422152)
chr3 (355-397)||(43105371-43105413)
chr3 (355-397)||(45278682-45278724)
chr3 (355-397)||(45279204-45279246)
chr3 (355-397)||(48189019-48189061)
chr3 (179-225)||(48438785-48438831)
chr3 (355-397)||(52032276-52032318)
chr3 (355-397)||(52032385-52032427)
chr3 (356-397)||(3596247-3596288)
chr3 (358-395)||(11910839-11910876)
chr3 (355-400)||(47551628-47551673)
chr3 (1-72)||(35767886-35767958)
chr3 (179-235)||(45282584-45282639)
chr3 (179-234)||(6718288-6718342)
chr3 (182-225)||(16498645-16498688)
chr3 (355-398)||(43608730-43608773)
chr3 (182-225)||(47923328-47923371)
chr3 (355-397)||(1757224-1757266)
chr3 (355-397)||(9368549-9368591)
chr3 (355-397)||(10307621-10307663)
chr3 (355-397)||(29118784-29118826)
chr3 (355-397)||(29192913-29192955)
chr3 (355-397)||(32717025-32717067)
chr3 (355-397)||(37249337-37249379)
chr3 (355-397)||(37778519-37778561)
chr3 (179-221)||(40735018-40735060)
chr3 (355-397)||(43105754-43105796)
chr3 (355-397)||(48188516-48188558)
chr3 (359-400)||(4322726-4322767)
chr3 (355-392)||(29686187-29686224)
chr3 (357-397)||(1078674-1078714)
chr3 (272-328)||(36025345-36025401)
chr3 (159-221)||(24968630-24968692)
chr3 (358-397)||(32306562-32306601)
chr3 (355-398)||(42855553-42855596)
chr3 (358-397)||(43998283-43998322)
chr3 (358-397)||(43998394-43998433)
chr3 (1-35)||(2078250-2078284)
chr3 (355-397)||(6956387-6956429)
chr3 (159-221)||(8512753-8512815)
chr3 (355-397)||(10294699-10294741)
chr3 (355-397)||(10294806-10294847)
chr3 (355-397)||(11026075-11026117)
chr3 (360-394)||(41989541-41989575)
chr3 (179-213)||(43404489-43404523)
chr3 (182-235)||(8127203-8127256)
chr3 (1-34)||(10440695-10440728)
chr3 (363-400)||(41558138-41558175)
chr3 (131-187)||(2671111-2671167)
chr3 (2-34)||(48022332-48022364)
[»] scaffold0491 (2 HSPs)
scaffold0491 (129-234)||(9203-9308)
scaffold0491 (129-235)||(11648-11754)
[»] chr5 (70 HSPs)
chr5 (129-234)||(16407641-16407746)
chr5 (129-234)||(15465020-15465125)
chr5 (129-234)||(26177466-26177571)
chr5 (129-234)||(36931843-36931948)
chr5 (129-234)||(9789704-9789809)
chr5 (133-234)||(16409077-16409178)
chr5 (124-234)||(9352807-9352917)
chr5 (129-234)||(18442128-18442233)
chr5 (129-234)||(26170357-26170462)
chr5 (129-235)||(24136379-24136485)
chr5 (129-234)||(29719965-29720070)
chr5 (129-234)||(29752285-29752390)
chr5 (141-234)||(29722152-29722245)
chr5 (131-225)||(30631846-30631940)
chr5 (129-234)||(29751619-29751724)
chr5 (131-225)||(15045178-15045271)
chr5 (131-225)||(27450307-27450401)
chr5 (157-225)||(1456646-1456714)
chr5 (129-236)||(22536748-22536854)
chr5 (131-225)||(27445464-27445558)
chr5 (157-225)||(29402558-29402626)
chr5 (157-225)||(43599242-43599310)
chr5 (157-225)||(43604734-43604802)
chr5 (157-225)||(43610226-43610294)
chr5 (158-234)||(10592844-10592919)
chr5 (179-235)||(14520799-14520855)
chr5 (158-234)||(16543994-16544069)
chr5 (158-234)||(16546216-16546291)
chr5 (142-227)||(37556131-37556215)
chr5 (158-235)||(40379677-40379753)
chr5 (158-226)||(25077713-25077781)
chr5 (158-226)||(25135682-25135750)
chr5 (355-397)||(17544186-17544228)
chr5 (355-397)||(17544294-17544336)
chr5 (355-397)||(20153056-20153098)
chr5 (179-225)||(31180776-31180822)
chr5 (184-234)||(35388196-35388246)
chr5 (179-225)||(43592800-43592846)
chr5 (181-226)||(11916452-11916497)
chr5 (356-397)||(21287904-21287945)
chr5 (159-235)||(31396488-31396564)
chr5 (355-400)||(36476900-36476945)
chr5 (142-227)||(37560953-37561037)
chr5 (159-234)||(2785888-2785963)
chr5 (159-234)||(33768697-33768772)
chr5 (159-234)||(33791829-33791904)
chr5 (158-234)||(40381889-40381964)
chr5 (142-225)||(28807084-28807166)
chr5 (355-397)||(11741765-11741807)
chr5 (179-225)||(12083659-12083705)
chr5 (355-397)||(20072259-20072301)
chr5 (355-397)||(20072789-20072831)
chr5 (355-397)||(20153164-20153206)
chr5 (355-397)||(22869743-22869785)
chr5 (355-397)||(22870382-22870424)
chr5 (355-397)||(36477296-36477338)
chr5 (355-397)||(39181195-39181237)
chr5 (355-397)||(39181716-39181758)
chr5 (359-400)||(21257413-21257454)
chr5 (159-234)||(31401346-31401421)
chr5 (355-397)||(16533545-16533587)
chr5 (355-397)||(22298680-22298722)
chr5 (355-397)||(33871477-33871519)
chr5 (361-397)||(33871590-33871626)
chr5 (355-397)||(20857070-20857113)
chr5 (355-397)||(20857466-20857509)
chr5 (190-225)||(43625605-43625640)
chr5 (355-397)||(16533031-16533073)
chr5 (1-35)||(30893943-30893977)
chr5 (1-34)||(20206526-20206559)
[»] chr4 (86 HSPs)
chr4 (129-234)||(28467977-28468082)
chr4 (129-234)||(13992774-13992879)
chr4 (129-234)||(31495797-31495902)
chr4 (129-235)||(31985126-31985232)
chr4 (131-225)||(24742475-24742569)
chr4 (129-237)||(5148197-5148305)
chr4 (131-225)||(9223907-9224001)
chr4 (131-225)||(9228694-9228788)
chr4 (131-225)||(51520948-51521042)
chr4 (131-225)||(56141519-56141613)
chr4 (157-225)||(3814529-3814597)
chr4 (144-225)||(5733158-5733239)
chr4 (158-225)||(18856234-18856301)
chr4 (158-225)||(18860446-18860513)
chr4 (141-226)||(7122274-7122358)
chr4 (141-226)||(7124496-7124580)
chr4 (141-234)||(8392982-8393073)
chr4 (141-234)||(8395191-8395282)
chr4 (158-225)||(45347325-45347392)
chr4 (143-237)||(5135646-5135738)
chr4 (174-234)||(5143807-5143867)
chr4 (173-225)||(8689045-8689097)
chr4 (143-234)||(5137875-5137964)
chr4 (179-225)||(3778118-3778164)
chr4 (179-225)||(16628354-16628400)
chr4 (179-225)||(38151919-38151965)
chr4 (182-225)||(5268700-5268743)
chr4 (179-225)||(6742897-6742943)
chr4 (179-225)||(10047935-10047981)
chr4 (179-225)||(16622775-16622821)
chr4 (355-397)||(23455092-23455134)
chr4 (355-397)||(27069048-27069090)
chr4 (355-397)||(27069156-27069198)
chr4 (355-397)||(39666914-39666956)
chr4 (355-397)||(50503963-50504005)
chr4 (355-400)||(40316911-40316956)
chr4 (355-400)||(40326985-40327030)
chr4 (355-400)||(51859542-51859587)
chr4 (179-235)||(29761185-29761240)
chr4 (359-397)||(147457-147495)
chr4 (355-397)||(10408027-10408069)
chr4 (355-397)||(11524087-11524129)
chr4 (355-397)||(22718185-22718227)
chr4 (355-397)||(23455609-23455651)
chr4 (355-397)||(32063584-32063626)
chr4 (355-397)||(38982516-38982558)
chr4 (355-397)||(39701047-39701089)
chr4 (355-397)||(45463211-45463253)
chr4 (355-397)||(45463319-45463361)
chr4 (355-397)||(50504071-50504113)
chr4 (355-397)||(52573366-52573408)
chr4 (355-397)||(52815801-52815843)
chr4 (355-397)||(52816343-52816385)
chr4 (355-397)||(54858806-54858848)
chr4 (179-225)||(54867748-54867794)
chr4 (355-397)||(56556720-56556762)
chr4 (356-397)||(39667023-39667064)
chr4 (361-397)||(51859658-51859694)
chr4 (179-225)||(9194167-9194214)
chr4 (358-397)||(9731461-9731500)
chr4 (131-194)||(18712294-18712357)
chr4 (358-397)||(27891722-27891761)
chr4 (179-222)||(36314715-36314758)
chr4 (179-222)||(36328924-36328967)
chr4 (357-395)||(3032722-3032760)
chr4 (358-392)||(11524198-11524232)
chr4 (355-397)||(22986989-22987031)
chr4 (355-397)||(30641655-30641697)
chr4 (355-397)||(39701155-39701197)
chr4 (355-397)||(52573474-52573516)
chr4 (355-397)||(54858698-54858740)
chr4 (355-397)||(56557245-56557287)
chr4 (185-222)||(5396176-5396213)
chr4 (355-400)||(10408135-10408180)
chr4 (359-400)||(50751750-50751791)
chr4 (358-394)||(5818024-5818060)
chr4 (359-397)||(148007-148045)
chr4 (1-35)||(17423194-17423228)
chr4 (1-35)||(21317355-21317389)
chr4 (1-35)||(41520964-41520998)
chr4 (355-397)||(55867362-55867404)
chr4 (130-171)||(5143782-5143823)
chr4 (1-34)||(11286798-11286831)
chr4 (355-400)||(11447977-11448022)
chr4 (2-34)||(19997382-19997414)
chr4 (358-394)||(38813695-38813731)
[»] chr1 (63 HSPs)
chr1 (129-234)||(24202251-24202356)
chr1 (129-234)||(19360912-19361017)
chr1 (129-234)||(19365768-19365873)
chr1 (129-235)||(51764989-51765095)
chr1 (132-234)||(13604095-13604197)
chr1 (129-234)||(20622716-20622821)
chr1 (129-234)||(40281958-40282063)
chr1 (132-234)||(9986785-9986887)
chr1 (131-226)||(41391084-41391178)
chr1 (141-234)||(21053540-21053632)
chr1 (142-225)||(39445992-39446074)
chr1 (129-234)||(9036003-9036107)
chr1 (124-225)||(26644382-26644483)
chr1 (158-225)||(44023385-44023452)
chr1 (156-227)||(21536119-21536190)
chr1 (158-235)||(44203217-44203293)
chr1 (158-225)||(1054522-1054589)
chr1 (142-225)||(25439407-25439489)
chr1 (142-225)||(25444600-25444682)
chr1 (179-225)||(13598970-13599016)
chr1 (355-400)||(49955482-49955527)
chr1 (179-235)||(3282276-3282332)
chr1 (179-234)||(37070337-37070392)
chr1 (355-397)||(7371428-7371470)
chr1 (355-397)||(8898655-8898697)
chr1 (355-397)||(17189092-17189134)
chr1 (179-225)||(24793674-24793720)
chr1 (355-397)||(31058303-31058345)
chr1 (355-397)||(35040860-35040902)
chr1 (355-397)||(40714582-40714624)
chr1 (355-397)||(49955593-49955635)
chr1 (355-400)||(46282713-46282758)
chr1 (358-397)||(35038593-35038632)
chr1 (179-226)||(41398767-41398814)
chr1 (358-397)||(45750091-45750130)
chr1 (355-397)||(5734147-5734189)
chr1 (356-398)||(20760752-20760794)
chr1 (355-397)||(28324942-28324984)
chr1 (355-397)||(45749980-45750022)
chr1 (355-397)||(46282209-46282251)
chr1 (355-397)||(49093179-49093221)
chr1 (355-397)||(49093733-49093775)
chr1 (182-225)||(13659846-13659889)
chr1 (358-397)||(30326634-30326673)
chr1 (358-397)||(32132442-32132481)
chr1 (358-397)||(37929556-37929595)
chr1 (355-397)||(8898763-8898805)
chr1 (355-397)||(12905905-12905947)
chr1 (179-217)||(16124197-16124235)
chr1 (355-397)||(40714690-40714731)
chr1 (355-397)||(50062341-50062383)
chr1 (355-397)||(50062868-50062910)
chr1 (159-235)||(43987947-43988023)
chr1 (359-400)||(46899196-46899237)
chr1 (358-397)||(28325053-28325092)
chr1 (1-43)||(10990714-10990756)
chr1 (355-397)||(13295273-13295315)
chr1 (1-35)||(13775628-13775662)
chr1 (179-213)||(29652384-29652418)
chr1 (1-35)||(44678034-44678068)
chr1 (359-397)||(46899852-46899890)
chr1 (2-34)||(28455371-28455403)
chr1 (2-34)||(32864303-32864335)
[»] scaffold0140 (1 HSPs)
scaffold0140 (129-234)||(7911-8016)
[»] chr8 (64 HSPs)
chr8 (129-235)||(26288412-26288518)
chr8 (129-235)||(26301669-26301775)
chr8 (129-235)||(26313663-26313769)
chr8 (124-234)||(7412842-7412952)
chr8 (133-234)||(2627318-2627419)
chr8 (129-234)||(31042908-31043013)
chr8 (129-234)||(1261414-1261519)
chr8 (131-225)||(33037295-33037389)
chr8 (131-225)||(36979912-36980006)
chr8 (131-225)||(4759542-4759636)
chr8 (131-225)||(10683747-10683841)
chr8 (131-225)||(18870029-18870123)
chr8 (131-225)||(30656180-30656274)
chr8 (129-234)||(3439088-3439192)
chr8 (131-225)||(6311833-6311927)
chr8 (131-225)||(18852635-18852729)
chr8 (158-225)||(39784333-39784400)
chr8 (157-221)||(7289439-7289503)
chr8 (157-225)||(25327672-25327740)
chr8 (143-234)||(42575820-42575909)
chr8 (143-234)||(15290143-15290232)
chr8 (143-234)||(15470512-15470601)
chr8 (179-225)||(5701960-5702006)
chr8 (355-400)||(34177218-34177263)
chr8 (179-226)||(4456578-4456625)
chr8 (179-225)||(10688626-10688672)
chr8 (355-397)||(15230177-15230219)
chr8 (355-397)||(35634345-35634387)
chr8 (355-400)||(34214448-34214493)
chr8 (355-400)||(39474680-39474725)
chr8 (355-395)||(15230071-15230111)
chr8 (179-235)||(25689560-25689615)
chr8 (159-234)||(35745904-35745979)
chr8 (357-400)||(2535800-2535843)
chr8 (355-397)||(10445581-10445623)
chr8 (355-397)||(11761978-11762020)
chr8 (355-397)||(25124809-25124851)
chr8 (355-397)||(34213902-34213944)
chr8 (355-397)||(34665908-34665950)
chr8 (355-397)||(42945252-42945294)
chr8 (355-397)||(42945360-42945402)
chr8 (356-397)||(21432831-21432872)
chr8 (179-226)||(19175232-19175279)
chr8 (358-397)||(44664646-44664685)
chr8 (358-397)||(44664757-44664796)
chr8 (363-397)||(8997943-8997977)
chr8 (179-225)||(23799100-23799146)
chr8 (355-397)||(27500226-27500268)
chr8 (355-397)||(34176579-34176621)
chr8 (355-397)||(34666461-34666503)
chr8 (355-397)||(37542362-37542404)
chr8 (355-400)||(2534830-2534875)
chr8 (356-397)||(41353820-41353861)
chr8 (358-398)||(7294238-7294278)
chr8 (355-395)||(21432939-21432979)
chr8 (356-400)||(38003701-38003745)
chr8 (358-397)||(6471828-6471867)
chr8 (355-397)||(27500334-27500376)
chr8 (1-35)||(37015853-37015887)
chr8 (355-397)||(38003593-38003635)
chr8 (355-395)||(6471936-6471976)
chr8 (357-397)||(25124701-25124741)
chr8 (2-34)||(33996080-33996112)
chr8 (2-34)||(35700413-35700445)
[»] chr6 (72 HSPs)
chr6 (129-235)||(6097881-6097987)
chr6 (129-234)||(22709540-22709645)
chr6 (129-235)||(5674228-5674334)
chr6 (129-234)||(2171999-2172104)
chr6 (129-234)||(3073238-3073343)
chr6 (129-234)||(26253589-26253694)
chr6 (124-234)||(23896847-23896957)
chr6 (131-225)||(30125026-30125120)
chr6 (129-235)||(411684-411790)
chr6 (131-225)||(11857465-11857559)
chr6 (129-234)||(27647467-27647572)
chr6 (157-225)||(14741934-14742002)
chr6 (157-225)||(22010197-22010265)
chr6 (129-235)||(16578997-16579102)
chr6 (129-235)||(16616278-16616383)
chr6 (124-235)||(5756950-5757061)
chr6 (141-235)||(6136456-6136548)
chr6 (143-226)||(34166673-34166755)
chr6 (141-234)||(16554454-16554546)
chr6 (141-234)||(16631010-16631102)
chr6 (158-225)||(6439008-6439075)
chr6 (143-226)||(13150856-13150938)
chr6 (159-225)||(5343990-5344056)
chr6 (141-234)||(25420797-25420888)
chr6 (141-234)||(33342597-33342688)
chr6 (143-235)||(34151827-34151917)
chr6 (143-235)||(34164443-34164533)
chr6 (179-225)||(5016977-5017023)
chr6 (179-225)||(5266599-5266645)
chr6 (355-397)||(7905489-7905531)
chr6 (355-397)||(12065358-12065400)
chr6 (179-225)||(14737093-14737139)
chr6 (355-397)||(15913794-15913836)
chr6 (355-397)||(21836168-21836210)
chr6 (179-225)||(31085954-31086000)
chr6 (355-400)||(4117467-4117512)
chr6 (157-234)||(6026834-6026910)
chr6 (159-234)||(16839256-16839331)
chr6 (159-234)||(33329932-33330007)
chr6 (355-397)||(7160942-7160984)
chr6 (355-397)||(7905381-7905423)
chr6 (355-397)||(8089581-8089623)
chr6 (355-397)||(14657129-14657171)
chr6 (359-397)||(20651148-20651186)
chr6 (355-397)||(22503020-22503062)
chr6 (179-225)||(28155098-28155144)
chr6 (355-397)||(31407016-31407058)
chr6 (355-397)||(31407124-31407166)
chr6 (355-397)||(33400104-33400146)
chr6 (159-235)||(6005932-6006008)
chr6 (356-397)||(7161051-7161092)
chr6 (179-234)||(24714941-24714997)
chr6 (186-234)||(33335429-33335477)
chr6 (358-397)||(6517640-6517679)
chr6 (358-397)||(10781407-10781446)
chr6 (358-397)||(21836279-21836318)
chr6 (355-397)||(1661350-1661392)
chr6 (355-397)||(14656618-14656660)
chr6 (355-397)||(15913686-15913728)
chr6 (179-225)||(18234653-18234699)
chr6 (355-397)||(22502912-22502954)
chr6 (355-400)||(4116934-4116979)
chr6 (179-227)||(5571755-5571803)
chr6 (129-225)||(10076673-10076769)
chr6 (181-225)||(21272470-21272514)
chr6 (179-234)||(16652716-16652770)
chr6 (187-234)||(31980094-31980141)
chr6 (355-390)||(33400874-33400909)
chr6 (355-397)||(33401045-33401088)
chr6 (1-35)||(331903-331937)
chr6 (179-213)||(603775-603809)
chr6 (359-397)||(13379734-13379772)
[»] scaffold0006 (6 HSPs)
scaffold0006 (132-234)||(132752-132854)
scaffold0006 (179-225)||(6255-6301)
scaffold0006 (179-225)||(3063-3109)
scaffold0006 (355-397)||(221927-221969)
scaffold0006 (355-397)||(222035-222077)
scaffold0006 (182-225)||(149607-149650)
[»] scaffold0286 (1 HSPs)
scaffold0286 (131-234)||(21939-22042)
[»] scaffold0087 (2 HSPs)
scaffold0087 (124-227)||(43441-43544)
scaffold0087 (174-235)||(36323-36384)
[»] scaffold0510 (1 HSPs)
scaffold0510 (124-234)||(1083-1193)
[»] scaffold1519 (1 HSPs)
scaffold1519 (129-197)||(519-587)
[»] scaffold0135 (1 HSPs)
scaffold0135 (157-225)||(34562-34630)
[»] scaffold1455 (1 HSPs)
scaffold1455 (158-225)||(1717-1784)
[»] scaffold0464 (1 HSPs)
scaffold0464 (158-225)||(870-937)
[»] scaffold0098 (1 HSPs)
scaffold0098 (181-235)||(45751-45805)
[»] scaffold0565 (1 HSPs)
scaffold0565 (141-234)||(3094-3185)
[»] scaffold0355 (1 HSPs)
scaffold0355 (157-225)||(3345-3413)
[»] scaffold0674 (1 HSPs)
scaffold0674 (156-234)||(4233-4310)
[»] scaffold0771 (1 HSPs)
scaffold0771 (355-397)||(1058-1100)
[»] scaffold0665 (1 HSPs)
scaffold0665 (179-225)||(8219-8265)
[»] scaffold0328 (2 HSPs)
scaffold0328 (355-397)||(11278-11320)
scaffold0328 (355-397)||(11386-11428)
[»] scaffold0137 (1 HSPs)
scaffold0137 (158-234)||(5859-5934)
[»] scaffold0128 (1 HSPs)
scaffold0128 (357-397)||(19995-20035)
[»] scaffold0599 (1 HSPs)
scaffold0599 (358-395)||(2533-2570)
[»] scaffold0197 (2 HSPs)
scaffold0197 (159-234)||(18663-18738)
scaffold0197 (159-221)||(13796-13858)
[»] scaffold0259 (1 HSPs)
scaffold0259 (159-221)||(1751-1813)
[»] scaffold0042 (1 HSPs)
scaffold0042 (358-397)||(12029-12068)
[»] scaffold0036 (1 HSPs)
scaffold0036 (179-225)||(86156-86203)
[»] scaffold0028 (1 HSPs)
scaffold0028 (159-221)||(148456-148518)
[»] scaffold0388 (2 HSPs)
scaffold0388 (356-397)||(12486-12527)
scaffold0388 (358-397)||(12377-12416)
[»] scaffold0775 (2 HSPs)
scaffold0775 (355-397)||(5100-5142)
scaffold0775 (356-397)||(6227-6268)
[»] scaffold0009 (1 HSPs)
scaffold0009 (159-221)||(176462-176524)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 39731038 - 39730933
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39731038 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 39730939  T
Q  229 tcaaca 234  Q
    ||||||    
T  39730938 tcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 48408503 - 48408397
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  48408503 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatc 48408404  T
Q  229 tcaacaa 235  Q
    |||||||    
T  48408403 tcaacaa 48408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 21646538 - 21646643
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  21646538 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatg 21646637  T
Q  229 tcaaca 234  Q
    ||||||    
T  21646638 tcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 18409294 - 18409399
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  18409294 accctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatc 18409393  T
Q  229 tcaaca 234  Q
    ||||||    
T  18409394 tcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 43504616 - 43504721
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  43504616 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagctaaatc 43504715  T
Q  229 tcaaca 234  Q
    ||||||    
T  43504716 tcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 18414171 - 18414275
Alignment:
Q  130 ccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatct 229  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18414171 ccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatct 18414270  T
Q  230 caaca 234  Q
    |||||    
T  18414271 caaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 2479850 - 2479960
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  2479850 ttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagcc 2479949  T
Q  224 aaatctcaaca 234  Q
    |||| ||||||    
T  2479950 aaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 47264157 - 47264267
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  47264157 ttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagcc 47264256  T
Q  224 aaatctcaaca 234  Q
    |||| ||||||    
T  47264257 aaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 24789531 - 24789426
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  24789531 accctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 24789432  T
Q  229 tcaaca 234  Q
    ||||||    
T  24789431 tcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 44847722 - 44847618
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctc 230  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||    
T  44847722 cctgcaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttc 44847623  T
Q  231 aacaa 235  Q
    |||||    
T  44847622 aacaa 44847618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 21640321 - 21640415
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21640321 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 21640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 21983762 - 21983867
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||| |||  ||||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||| |     
T  21983762 accctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 21983861  T
Q  229 tcaaca 234  Q
    ||||||    
T  21983862 tcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 1532963 - 1532884
Alignment:
Q  155 caaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1532963 caaattcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 25767441 - 25767541
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||      ||||| |||||||||||||||||||||     
T  25767441 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttct------ttccagaccacaaatttgaagccaaata 25767534  T
Q  229 tcaacaa 235  Q
    |||||||    
T  25767535 tcaacaa 25767541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 2058503 - 2058596
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  2058503 cctgcaaactagctcacggcacctcaaa-tcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 2058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 20357130 - 20357036
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20357130 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 20357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 21989427 - 21989532
Alignment:
Q  130 ccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatct 229  Q
    ||||||||||||||||||| |||  ||||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||| | |    
T  21989427 ccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaacttt 21989526  T
Q  230 caacaa 235  Q
    ||||||    
T  21989527 caacaa 21989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 4873645 - 4873713
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4873645 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 12406781 - 12406849
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  12406781 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 12406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 31109146 - 31109078
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31109146 aaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 31109078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 12397390 - 12397484
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  12397390 cctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaa 12397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 32060797 - 32060889
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  32060797 agctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 32060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 6592830 - 6592921
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  6592830 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 6595046 - 6595139
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaag 236  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||| ||||| ||||||||||||||| | ||||||||||||    
T  6595046 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagac-aatctcaacaag 6595139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 1562511 - 1562588
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  1562511 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 1562588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 20343592 - 20343500
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | | ||||||||||||||||||| | ||| ||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  20343592 agctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 21811829 - 21811745
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||| || | ||||||||||||| |||| ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  21811829 gctcacggcatctcaga-tcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 24023895 - 24023830
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 222  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||    
T  24023895 aaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 18392705 - 18392780
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  18392705 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 79958 - 80004
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  79958 tcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaa 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 4226305 - 4226263
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4226305 gggtatttttgtccattcccatgccattttgctaatttgatga 4226263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 10600195 - 10600237
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10600195 gggtatttttgtccattcccatgccattttgctaatttgatga 10600237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 18087586 - 18087628
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18087586 gggtatttttgtccattcccatgccattttgctaatttgatga 18087628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 24260895 - 24260829
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| | || ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 24260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 25628658 - 25628616
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25628658 gggtatttttgtccattcccatgccattttgctaatttgatga 25628616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 42618091 - 42618049
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42618091 gggtatttttgtccattcccatgccattttgctaatttgatga 42618049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 1533008 - 1532947
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgat 190  Q
    ||||||||||| |||||| |||| | ||||||| ||||||||||||||||||||||||||||    
T  1533008 accctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 5456007 - 5455962
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  5456007 gggtatttttgtccattctcatgccattttgctaatttgatgatgt 5455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 25453377 - 25453416
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25453377 tatttttgtccattcccatgccattttgctaatttgatga 25453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 27480666 - 27480709
Alignment:
Q  354 tgggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  27480666 tgggtatttttgtcaattcccatgccattttgctaatttgatga 27480709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 42618160 - 42618199
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42618160 tatttttgtccattcccatgccattttgctaatttgatga 42618199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 16880586 - 16880648
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||| |||||||||    
T  16880586 atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 16885441 - 16885503
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||||| |||| ||||| ||||||| ||||| ||||||||||||| |||||||||    
T  16885441 atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 18086469 - 18086427
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  18086469 gggtatttttgtccatttccatgccattttgctaatttgatga 18086427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22661537 - 22661495
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  22661537 gggtatttttgtcaattcccatgccattttgctaatttgatga 22661495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 23058675 - 23058717
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  23058675 gggtatttttgtccattcccatgccattttgttaatttgatga 23058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 25628724 - 25628766
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  25628724 gggtagttttgtccattcccatgccattttgctaatttgatga 25628766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 27480167 - 27480125
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  27480167 gggtatttttgtcaattcccatgccattttgctaatttgatga 27480125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 32068276 - 32068234
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  32068276 gggtatttttgtcctttcccatgccattttgctaatttgatga 32068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 32934528 - 32934486
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  32934528 gggtatttttgtccattcctatgccattttgctaatttgatga 32934486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 33808503 - 33808461
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  33808503 gggtatttttgtccattcccatcccattttgctaatttgatga 33808461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 43124400 - 43124442
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  43124400 gggtatttttgtccattcccatgtcattttgctaatttgatga 43124442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 45914704 - 45914662
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  45914704 gggtatttttgtccattcccatgtcattttgctaatttgatga 45914662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 46205555 - 46205597
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  46205555 gggtatttttgtccattcccatgccattttcctaatttgatga 46205597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 25453307 - 25453266
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  25453307 ggtatttttgtccattcccatgcctttttgctaatttgatga 25453266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 32934594 - 32934635
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatg 396  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  32934594 gggtatttttgtccattcccatgtcattttgctaatttgatg 32934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 47945528 - 47945483
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  47945528 gggtatttttgtccattcctatgccattttgttaatttgatgatgt 47945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 47950958 - 47950913
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  47950958 gggtatttttgtccattcctatgccattttgttaatttgatgatgt 47950913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 4227093 - 4227137
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  4227093 ggtatttttgtccattctcatgccattttgctaattttatgatgt 4227137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 23058607 - 23058567
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  23058607 gtatttttgtccattcccatgacattttgctaatttgatga 23058567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 18855901 - 18855944
Alignment:
Q  354 tgggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  18855901 tgggtatttttgtcctttcccatgctattttgctaatttgatga 18855944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 33828220 - 33828263
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  33828220 gggtatttttgtccattcccatgccattttgttagtttgatgat 33828263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 46515857 - 46515810
Alignment:
Q  179 tcgtgtcacgatttctctgttcttcc-aaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  46515857 tcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaa 46515810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 12228565 - 12228523
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  12228565 gggtatttttgtccattctcatgccattttgttaatttgatga 12228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 13384682 - 13384640
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  13384682 gggtatttttgtccattcccatgtcattttgttaatttgatga 13384640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22081739 - 22081697
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  22081739 gggtatttttgtccattctcatgccatttcgctaatttgatga 22081697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 28890759 - 28890717
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  28890759 gggtatttttgtccattttcatgccattttgctaatttgatga 28890717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 32068342 - 32068384
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  32068342 gggtctttttgtcaattcccatgccattttgctaatttgatga 32068384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 47558210 - 47558168
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  47558210 gggtatttttatccattcccatgacattttgctaatttgatga 47558168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 49092241 - 49092282
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 220  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  49092241 tcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 29144232 - 29144272
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  29144232 gtatttttgtccattcccatacaattttgctaatttgatga 29144272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 32687575 - 32687535
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  32687575 gtattttggtccattcccatgcaattttgctaatttgatga 32687535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 43266514 - 43266554
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  43266514 gtatttttgtccattctcatgtcattttgctaatttgatga 43266554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 46204599 - 46204559
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  46204599 gtatttttgttcattcccatgccattttactaatttgatga 46204559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 18390508 - 18390562
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||| | ||||||||||    
T  18390508 tcgtggcacgatttccctgttcttctaaaccacaaatttgaagac-aatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 3830112 - 3830078
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    |||||||||||||||||||||| ||||||||||||    
T  3830112 cttgcatatattatgcattgtccctacaaactgag 3830078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 12643280 - 12643238
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| ||||||||  |||||||||||||    
T  12643280 gggtatttttgtccattcctatgccattaagctaatttgatga 12643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 12644057 - 12644095
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  12644057 atttttgttcattctcatgccattttgctaatttgatga 12644095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 24265751 - 24265689
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||   |||| ||||| ||||||| ||||||||| ||||||||| |||||||||    
T  24265751 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 27138187 - 27138229
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||  |||||| |||||||||||    
T  27138187 gggtatttttgtccattcccatgttattttgttaatttgatga 27138229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 32688466 - 32688508
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||    
T  32688466 gggtatttttgtctatttccatgcaattttgctaatttgatga 32688508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 43266446 - 43266404
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||| ||||||||| |||||||| |||||||||||    
T  43266446 gggtatttttgttcattcccataccattttgttaatttgatga 43266404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 47558987 - 47559024
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaattt 392  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  47558987 gggtatttttgtccatttccatgtcattttgctaattt 47559024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 397
Target Start/End: Original strand, 22081811 - 22081847
Alignment:
Q  361 ttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||| |||||| |||||||||||||    
T  22081811 ttttgtccattcccataccatttggctaatttgatga 22081847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 32289253 - 32289148
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32289253 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 32289154  T
Q  229 tcaaca 234  Q
    ||||||    
T  32289153 tcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 3492272 - 3492378
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||    
T  3492272 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatc 3492371  T
Q  229 tcaacaa 235  Q
    |||||||    
T  3492372 tcaacaa 3492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 25410161 - 25410267
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  25410161 accctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaac 25410260  T
Q  229 tcaacaa 235  Q
    |||||||    
T  25410261 tcaacaa 25410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 40739352 - 40739457
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  40739352 accctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatc 40739451  T
Q  229 tcaaca 234  Q
    ||||||    
T  40739452 tcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 30833026 - 30832921
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  30833026 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 30832927  T
Q  229 tcaaca 234  Q
    ||||||    
T  30832926 tcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 4484818 - 4484924
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||    
T  4484818 accctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatc 4484917  T
Q  229 tcaacaa 235  Q
    |||||||    
T  4484918 tcaacaa 4484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 6266379 - 6266274
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||    
T  6266379 accctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatc 6266280  T
Q  229 tcaaca 234  Q
    ||||||    
T  6266279 tcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 9295964 - 9295870
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9295964 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 14292023 - 14292117
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14292023 cctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 11098489 - 11098395
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  11098489 cctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39811553 - 39811485
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39811553 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 44310547 - 44310479
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  44310547 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44310479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 32247262 - 32247344
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32247262 gctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 12647876 - 12647968
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  12647876 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 12647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 28258729 - 28258668
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaa 28258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 8389678 - 8389632
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8389678 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 33528150 - 33528106
Alignment:
Q  181 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33528150 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 33528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 20522794 - 20522837
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 20522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 36757477 - 36757426
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 36757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 6588863 - 6588821
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6588863 gggtatttttgtccattcccatgccattttgctaatttgatga 6588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 8710648 - 8710606
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8710648 gggtatttttgtccattcccatgccattttgctaatttgatga 8710606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 8710714 - 8710756
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8710714 gggtatttttgtccattcccatgccattttgctaatttgatga 8710756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 10706780 - 10706734
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  10706780 tcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaa 10706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 11830544 - 11830502
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11830544 gggtatttttgtccattcccatgccattttgctaatttgatga 11830502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 15604585 - 15604627
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15604585 gggtatttttgtccattcccatgccattttgctaatttgatga 15604627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 21630514 - 21630560
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  21630514 tcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 21630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 39483446 - 39483492
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  39483446 tcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaa 39483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 25624353 - 25624398
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  25624353 gggtatttttgtccattcccatgccattttgttaatttgatgatgt 25624398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 28258760 - 28258713
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 171  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  28258760 ttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 8342367 - 8342325
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  8342367 gggtatttttgtcaattcccatgccattttgctaatttgatga 8342325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 15604519 - 15604477
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15604519 gggtatttttgtccattcccatgccattttgctaatttcatga 15604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 20983181 - 20983223
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  20983181 gggtatttttgtcaattcccatgccattttgctaatttgatga 20983223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 21103261 - 21103219
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  21103261 gggtatttttgtcaattcccatgccattttgctaatttgatga 21103219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 23077999 - 23077953
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  23077999 tcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaa 23077953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 25623468 - 25623426
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  25623468 gggtatttttgtccattcccatgccattttgttaatttgatga 25623426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 29957997 - 29957955
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  29957997 gggtatttttgtcaattcccatgccattttgctaatttgatga 29957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 29958467 - 29958509
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  29958467 gggtatttttgtcaattcccatgccattttgctaatttgatga 29958509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 19344961 - 19345010
Alignment:
Q  185 cacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  19344961 cacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 41587413 - 41587372
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  41587413 ggtatttttgtccattcccatgcaattttgctaatttgatga 41587372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 19349793 - 19349868
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||||||||| |||| | ||||||    
T  19349793 atcgtgtcacgattgccaaatt-gcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 33118696 - 33118751
Alignment:
Q  180 cgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| ||||| |||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaa 33118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 20982704 - 20982662
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  20982704 gggtatttttgtcaattcccataccattttgctaatttgatga 20982662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 39936495 - 39936537
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  39936495 gggtatttttgtccttttccatgccattttgctaatttgatga 39936537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 41588304 - 41588346
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  41588304 gggtatttttgtcaatttccatgccattttgctaatttgatga 41588346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 25230282 - 25230237
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||    
T  25230282 gggtatttttgtccattcgcatgccattttgccaatctgatgatgt 25230237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 395
Target Start/End: Original strand, 202605 - 202644
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgat 395  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  202605 ggtatttttgtctattctcatgccattttgctaatttgat 202644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 13569902 - 13569945
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||    
T  13569902 tgtcatgatttttctgttctttcaaaccacaaatttgaagccaa 13569945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7206169 - 7206135
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  7206169 cttgcatatattatgcattgtctctaccaactgag 7206135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 22608571 - 22608537
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  22608571 cttgcatatattatgcattgtctctaccaactgag 22608537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 199188 - 199143
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||    
T  199188 gggtatttttgtccattcgcatgctcttttgttaatttgatgatgt 199143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26999154 - 26999121
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactga 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  26999154 cttgcatatattatgcattgtctctaccaactga 26999121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 17536 - 17428
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17536 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 17437  T
Q  229 tcaacaaga 237  Q
    |||||||||    
T  17436 tcaacaaga 17428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 125)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 37726189 - 37726300
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37726189 ttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 37726288  T
Q  224 aaatctcaacaa 235  Q
    ||||||||||||    
T  37726289 aaatctcaacaa 37726300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 26928185 - 26928079
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26928185 accctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 26928086  T
Q  229 tcaacaa 235  Q
    |||||||    
T  26928085 tcaacaa 26928079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 23198425 - 23198530
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23198425 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 23198524  T
Q  229 tcaaca 234  Q
    ||||||    
T  23198525 tcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 23200624 - 23200729
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23200624 accctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 23200723  T
Q  229 tcaaca 234  Q
    ||||||    
T  23200724 tcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 33386242 - 33386137
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  33386242 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatc 33386143  T
Q  229 tcaaca 234  Q
    ||||||    
T  33386142 tcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 37408146 - 37408036
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  37408146 ttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagcc 37408047  T
Q  224 aaatctcaaca 234  Q
    |||||||||||    
T  37408046 aaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 7782607 - 7782712
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  7782607 accctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaaatc 7782706  T
Q  229 tcaaca 234  Q
    ||||||    
T  7782707 tcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 27453476 - 27453581
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||||||    
T  27453476 accctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatc 27453575  T
Q  229 tcaaca 234  Q
    ||||||    
T  27453576 tcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 35766452 - 35766359
Alignment:
Q  235 agatctgactcatgttttgcaaaccatttcttgtacgttcctctctgatttctcacatgtgatggatttgttttatagaacacaggtatcacaa 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  35766452 agatctgactcatgttttgcaaaccatttcttgtacgttcctctctgatttctcacatgtgatggatctattttatagaacacaggtatcacaa 35766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 800790 - 800685
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||    
T  800790 accccgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatc 800691  T
Q  229 tcaaca 234  Q
    ||||||    
T  800690 tcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 1306499 - 1306604
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  1306499 accctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaaatc 1306598  T
Q  229 tcaaca 234  Q
    ||||||    
T  1306599 tcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 40372358 - 40372264
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  40372358 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 40372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 22172764 - 22172670
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||  |||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22172764 cctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 8477903 - 8477994
Alignment:
Q  134 gcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||| ||||||||||| | | ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  8477903 gcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaa 8477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 7167780 - 7167874
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   |||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  7167780 cctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaa 7167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 28501254 - 28501160
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  28501254 cctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 18656940 - 18657021
Alignment:
Q  144 tcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||    
T  18656940 tcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 18657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 28503395 - 28503327
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  28503395 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 6716189 - 6716084
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||| ||| | ||||    
T  6716189 accctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatc 6716091  T
Q  229 tcaacaa 235  Q
    |||||||    
T  6716090 tcaacaa 6716084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 3617125 - 3617034
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  3617125 agctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 4599016 - 4599107
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  4599016 agctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 4601237 - 4601328
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  4601237 agctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 54634802 - 54634710
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | | |||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  54634802 agctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10055894 - 10055812
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10055894 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10058116 - 10058034
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10058116 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10060338 - 10060256
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10060338 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10062560 - 10062478
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10062560 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10064782 - 10064700
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10064782 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 10067004 - 10066922
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10067004 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 27352182 - 27352092
Alignment:
Q  132 ctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 222  Q
    |||||||| ||||||||||| |   ||||||||||||||||||||| |||||||||||||| |||||||||| | ||||||||||| ||||    
T  27352182 ctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagc 27352092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 36029639 - 36029708
Alignment:
Q  156 aaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36029639 aaaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 36029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 25637089 - 25637010
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaaga 237  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||| ||| | |||||||||||||    
T  25637089 aaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagac-aatctcaacaaga 25637010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 32143868 - 32143928
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 10208867 - 10208778
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||    
T  10208867 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 10211067 - 10210978
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||||    
T  10211067 ctcacggcatc-ctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagac-aatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 21711771 - 21711817
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21711771 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 30709313 - 30709267
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30709313 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 30709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 2672493 - 2672425
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||||  |||| ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  2672493 atcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 2676649 - 2676581
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||||  |||| ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  2676649 atcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 27986017 - 27985957
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 39032072 - 39032017
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||    
T  39032072 tcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 40788600 - 40788557
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40788600 gggtatttttgtccattcccatgccattttgctaatttgatgat 40788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 1730959 - 1730917
Alignment:
Q  183 gtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaa 1730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 3469380 - 3469338
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3469380 gggtatttttgtccattcccatgccattttgctaatttgatga 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 3469446 - 3469488
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3469446 gggtatttttgtccattcccatgccattttgctaatttgatga 3469488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 13948960 - 13948918
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13948960 gggtatttttgtccattcccatgccattttgctaatttgatga 13948918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 16264899 - 16264945
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16264899 tcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaa 16264945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 27027276 - 27027318
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27027276 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 27038589 - 27038667
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| ||   || ||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||    
T  27038589 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaa 27038667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 27986043 - 27986001
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 171  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27986043 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 29118718 - 29118676
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29118718 gggtatttttgtccattcccatgccattttgctaatttgatga 29118676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 32475997 - 32476063
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| | || ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 32480855 - 32480921
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| | || ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 32716429 - 32716387
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32716429 gggtatttttgtccattcccatgccattttgctaatttgatga 32716387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 35644031 - 35643989
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35644031 gggtatttttgtccattcccatgccattttgctaatttgatga 35643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 40734129 - 40734087
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40734129 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 40788666 - 40788708
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40788666 gggtatttttgtccattcccatgccattttgctaatttgatga 40788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 8738593 - 8738550
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 9090831 - 9090788
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9090788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 27974524 - 27974477
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 171  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  27974524 ttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 40592296 - 40592253
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  40592296 tgtcacgatttctccgttcttccaaaccacaaatttgaagccaa 40592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 40845224 - 40845279
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||    
T  40845224 tcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 1756730 - 1756688
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  1756730 gggtatttttgtcaattcccatgccattttgctaatttgatga 1756688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 2944093 - 2944051
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  2944093 gggtatttttgtcaattcccatgccattttgctaatttgatga 2944051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 2944586 - 2944628
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  2944586 gggtatttttgtcaattcccatgccattttgctaatttgatga 2944628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 3596355 - 3596397
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  3596355 gggtatttttgtccattcccatgtcattttgctaatttgatga 3596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 11026552 - 11026594
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  11026552 gggtatttttgtcaattcccatgccattttgctaatttgatga 11026594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 24694754 - 24694656
Alignment:
Q  129 accctgcaaacca-gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttcc-aaaccacaaatttgaagccaa 225  Q
    |||||||||| || ||||||| |||  |||||||||| |||| ||   || |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  24694754 accctgcaaaacatgctcacgacattgcaaaatcgtgacacgttgatgaaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaa 24694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 29686121 - 29686079
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  29686121 gggtatttttctccattcccatgccattttgctaatttgatga 29686079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 32143842 - 32143884
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 171  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  32143842 accctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 32306670 - 32306712
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  32306670 gggtatttttgtccattcctatgccattttgctaatttgatga 32306712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 35759049 - 35759091
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  35759049 gggtatttttgtccattctcatgccattttgctaatttgatga 35759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 35926060 - 35926105
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  35926060 tcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaa 35926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 37249718 - 37249760
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  37249718 gggtatttttgtcaattcccatgccattttgctaatttgatga 37249760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 41422152 - 41422110
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  41422152 gggtatttttgtccattcccatgtcattttgctaatttgatga 41422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 43105413 - 43105371
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  43105413 gggtatttttgtcaattcccatgccattttgctaatttgatga 43105371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 45278724 - 45278682
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  45278724 gggtatttttgtcaattcccatgccattttgctaatttgatga 45278682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 45279204 - 45279246
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  45279204 gggtatttttgtccattcccatgtcattttgctaatttgatga 45279246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 48189019 - 48189061
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  48189019 gggtatttttgtcaattcccatgccattttgctaatttgatga 48189061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 48438785 - 48438831
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||    
T  48438785 tcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaa 48438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 52032318 - 52032276
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  52032318 gggtatttttgtccattcccatgccattttgttaatttgatga 52032276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 52032385 - 52032427
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  52032385 gggtatttttgtccattcccatgtcattttgctaatttgatga 52032427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 3596288 - 3596247
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  3596288 ggtatttttgtccattctcatgccattttgctaatttgatga 3596247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 11910876 - 11910839
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgat 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11910876 tatttttgtccattcccatgccattttgctaatttgat 11910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 47551673 - 47551628
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  47551673 gggtaattttgtccatttccatgccattttgctaatttgatgatgt 47551628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35767958 - 35767886
Alignment:
Q  1 cttgcatatattatgcattgtctc-tacaaactgaggcaaactccgcaaaataagtttcattttcaatgtaat 72  Q
    |||||||||||||| ||| ||| | |||||||||||  || ||||||||||||||||| ||||||||||||||    
T  35767958 cttgcatatattatacatcgtcccctacaaactgagttaagctccgcaaaataagttttattttcaatgtaat 35767886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 45282639 - 45282584
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  45282639 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 45282584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 6718342 - 6718288
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  6718342 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 16498688 - 16498645
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  16498688 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 16498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 43608730 - 43608773
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  43608730 gggtatttttgtccatttccatgccatcttgctaatttgatgat 43608773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 47923371 - 47923328
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaa 47923328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 1757224 - 1757266
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  1757224 gggtatttttgtcaattctcatgccattttgctaatttgatga 1757266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 9368549 - 9368591
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  9368549 gggtatttttgtccattctcatgccattttgttaatttgatga 9368591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 10307621 - 10307663
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  10307621 gggtatttttgtccattcccatgcaattttgctaattttatga 10307663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 29118784 - 29118826
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  29118784 gggtatttttgtctattcccatgccattttgctaatgtgatga 29118826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 29192913 - 29192955
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  29192913 gggtatttttgtcaattcccatgtcattttgctaatttgatga 29192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 32717025 - 32717067
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  32717025 gggtatttttgtccattcctatgtcattttgctaatttgatga 32717067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 37249379 - 37249337
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  37249379 gggtatttttgtcaatttccatgccattttgctaatttgatga 37249337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 37778519 - 37778561
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  37778519 gggtatttttgtctattctcatgccattttgctaatttgatga 37778561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 40735060 - 40735018
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  40735060 tcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 43105754 - 43105796
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  43105754 gggtatttttgtcaattccaatgccattttgctaatttgatga 43105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 48188558 - 48188516
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  48188558 gggtatttttgtcaattcccatggcattttgctaatttgatga 48188516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 4322767 - 4322726
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  4322767 atttttgtccattcccatgctattttgttaatttgatgatgt 4322726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 29686187 - 29686224
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaattt 392  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29686187 gggtatttttgtccatttccatgccattttgctaattt 29686224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 1078714 - 1078674
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  1078714 gtatttttgtccattcccgtgccatcttgctaatttgatga 1078674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 36025345 - 36025401
Alignment:
Q  272 ttcctctctgatttctcacatgtgatggatttgttttatagaacacaggtatcacaa 328  Q
    ||||| ||||||| |||||||||||||||| | ||| |||||| |||||||||||||    
T  36025345 ttcctttctgattcctcacatgtgatggatctatttcatagaaaacaggtatcacaa 36025401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 24968630 - 24968692
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    |||||||||||| ||||||| ||||| ||||||| || |||||||||||||||| |||||||||    
T  24968630 atcgtgtcacgattgccaaa-tcgtgacacgattcctttgttcttccaaaccactaatttgaag 24968692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 32306601 - 32306562
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  32306601 tatttttgtccattcccaagtcattttgctaatttgatga 32306562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 42855553 - 42855596
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||    
T  42855553 gggtatttttatcctttcccaagccattttgctaatttgatgat 42855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 43998322 - 43998283
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  43998322 tatttttgaccattcccatgccattttgcgaatttgatga 43998283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 43998394 - 43998433
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  43998394 tatttttgtccattctcatggcattttgctaatttgatga 43998433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2078284 - 2078250
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  2078284 cttgcatatattatgcattgtctctaccaactgag 2078250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 6956429 - 6956387
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||    
T  6956429 gggtatttttgtccattcccatgtcattttgttaattttatga 6956387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 8512753 - 8512815
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||   |||| ||||| ||||||| ||||||||| ||||||||| |||||||||    
T  8512753 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 10294741 - 10294699
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||| |||| ||||| |||||||||||||||||||    
T  10294741 gggtatttttgtacatttccatgtcattttgctaatttgatga 10294699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 10294806 - 10294847
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  10294806 gggtatttttgtccattcccatgcca-tttggtaatttgatga 10294847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 11026117 - 11026075
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||    
T  11026117 gggtatttttgtcaatttccatgcgattttgctaatttgatga 11026075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 394
Target Start/End: Original strand, 41989541 - 41989575
Alignment:
Q  360 tttttgtccattcccatgccattttgctaatttga 394  Q
    ||||||||||||| |||||||||||||||||||||    
T  41989541 tttttgtccattctcatgccattttgctaatttga 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 43404489 - 43404523
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaa 213  Q
    ||||||||||||||||||||||||||||| |||||    
T  43404489 tcgtgtcacgatttctctgttcttccaaaacacaa 43404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 8127203 - 8127256
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||| ||  || ||| ||||||||||||||||||| |||||||    
T  8127203 tgtcacgatttctctatttctcaaaatcacaaatttgaagccaaatttcaacaa 8127256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10440728 - 10440695
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactga 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  10440728 cttgcatatattatgcattgtctctaccaactga 10440695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 41558138 - 41558175
Alignment:
Q  363 ttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  41558138 ttgtccattcccataccattttgataatttgatgatgt 41558175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 2671167 - 2671111
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcac 187  Q
    ||||||||| ||||||||||| |   ||||| ||||||||||||||| |||||||||    
T  2671167 cctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 48022332 - 48022364
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  48022332 ttgcatatattatgcattgtctctaccaactga 48022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 9203 - 9308
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9203 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 9302  T
Q  229 tcaaca 234  Q
    ||||||    
T  9303 tcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 11648 - 11754
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  11648 accctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatc 11747  T
Q  229 tcaacaa 235  Q
    |||||||    
T  11748 tcaacaa 11754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 16407746 - 16407641
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16407746 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 16407647  T
Q  229 tcaaca 234  Q
    ||||||    
T  16407646 tcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 15465020 - 15465125
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  15465020 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatc 15465119  T
Q  229 tcaaca 234  Q
    ||||||    
T  15465120 tcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 26177571 - 26177466
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  26177571 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatc 26177472  T
Q  229 tcaaca 234  Q
    ||||||    
T  26177471 tcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 36931948 - 36931843
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36931948 accctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcgaaatc 36931849  T
Q  229 tcaaca 234  Q
    ||||||    
T  36931848 tcaaca 36931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 9789704 - 9789809
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  9789704 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 9789803  T
Q  229 tcaaca 234  Q
    ||||||    
T  9789804 tcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 16409178 - 16409077
Alignment:
Q  133 tgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaa 232  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  16409178 tgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaa 16409079  T
Q  233 ca 234  Q
    ||    
T  16409078 ca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 9352917 - 9352807
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||    
T  9352917 ttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagcc 9352818  T
Q  224 aaatctcaaca 234  Q
    |||||||||||    
T  9352817 aaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 18442128 - 18442233
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  18442128 accctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 18442227  T
Q  229 tcaaca 234  Q
    ||||||    
T  18442228 tcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 26170462 - 26170357
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |    
T  26170462 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaac 26170363  T
Q  229 tcaaca 234  Q
    ||||||    
T  26170362 tcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 24136379 - 24136485
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||     
T  24136379 accctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaata 24136478  T
Q  229 tcaacaa 235  Q
    |||||||    
T  24136479 tcaacaa 24136485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 29720070 - 29719965
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  29720070 accctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 29719971  T
Q  229 tcaaca 234  Q
    ||||||    
T  29719970 tcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 29752285 - 29752390
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  29752285 accctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 29752384  T
Q  229 tcaaca 234  Q
    ||||||    
T  29752385 tcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 29722245 - 29722152
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  29722245 agctcacagcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 30631846 - 30631940
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||  |||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  30631846 cctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 29751619 - 29751724
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| ||| ||||||||||  |||||||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  29751619 accctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 29751718  T
Q  229 tcaaca 234  Q
    ||||||    
T  29751719 tcaaca 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 15045178 - 15045271
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||  |||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  15045178 cctgcaaactggctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 15045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 27450307 - 27450401
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27450307 cctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 27450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 1456714 - 1456646
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  1456714 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 22536748 - 22536854
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| | ||||    
T  22536748 accctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatc 22536846  T
Q  229 tcaacaag 236  Q
    ||||||||    
T  22536847 tcaacaag 22536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 27445464 - 27445558
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  27445464 cctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaa 27445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 29402626 - 29402558
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29402626 aaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 29402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 43599242 - 43599310
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43599242 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43599310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 43604734 - 43604802
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43604734 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43604802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 43610226 - 43610294
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43610226 aaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 10592919 - 10592844
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  10592919 aatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 14520799 - 14520855
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  14520799 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 14520855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 16544069 - 16543994
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  16544069 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 16546291 - 16546216
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  16546291 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 37556215 - 37556131
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||| || | ||||||||||||  | || ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  37556215 gctcacggcatctcaga-tcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 40379753 - 40379677
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  40379753 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 40379677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 25077781 - 25077713
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||| |||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  25077781 aatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 25135750 - 25135682
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||| |||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  25135750 aatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 17544228 - 17544186
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17544228 gggtatttttgtccattcccatgccattttgctaatttgatga 17544186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 17544294 - 17544336
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17544294 gggtatttttgtccattcccatgccattttgctaatttgatga 17544336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 20153098 - 20153056
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20153098 gggtatttttgtccattcccatgccattttgctaatttgatga 20153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 31180776 - 31180822
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31180776 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 31180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  184 tcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 43592800 - 43592846
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43592800 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 11916497 - 11916452
Alignment:
Q  181 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  11916497 gtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 21287904 - 21287945
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21287904 ggtatttttgtccattcccatgccattttgctaatttgatga 21287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 31396564 - 31396488
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||| ||||||||||||||||||||||| | |||||||    
T  31396564 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 31396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 36476945 - 36476900
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  36476945 gggtatttttgtcaattcccatgccattttgctaatttgatgatgt 36476900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 37561037 - 37560953
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||| || | ||||||||||||    || ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  37561037 gctcacggcatctcaga-tcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 2785888 - 2785963
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  2785888 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 33768697 - 33768772
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  33768697 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 33791829 - 33791904
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  33791829 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 40381964 - 40381889
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||||| || ||||||||||||||| | ||||||||||    
T  40381964 aatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 28807166 - 28807084
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||| || | ||||||||||||  |||| ||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  28807166 gctcacggcatctcaga-tcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaa 28807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 11741765 - 11741807
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  11741765 gggtatttttgtccattccaatgccattttgctaatttgatga 11741807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 12083705 - 12083659
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  12083705 tcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaa 12083659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 20072301 - 20072259
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  20072301 gggtatttttgtcaattcccatgccattttgctaatttgatga 20072259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 20072789 - 20072831
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  20072789 gggtatttttgtcaattcccatgccattttgctaatttgatga 20072831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 20153164 - 20153206
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  20153164 gggtatttttgtccattcccatgtcattttgctaatttgatga 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22869785 - 22869743
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  22869785 gggtatttttgtccattctcatgccattttgctaatttgatga 22869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 22870382 - 22870424
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  22870382 gggtatttttgtccattcccatgtcattttgctaatttgatga 22870424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 36477296 - 36477338
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  36477296 gggtatttttgtcaattcccatgccattttgctaatttgatga 36477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 39181237 - 39181195
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39181237 gggtatttttgtcaattcccatgccattttgctaatttgatga 39181195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 39181716 - 39181758
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39181716 gggtatttttgtcaattcccatgccattttgctaatttgatga 39181758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 21257413 - 21257454
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  21257413 atttttgtccattctcatgccattttgctaatttgatgatgt 21257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 31401421 - 31401346
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| ||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||| | ||||||    
T  31401421 atcgtgtcacgattgccaaat-cgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 16533545 - 16533587
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  16533545 gggtatttttgtcaattcccatgccattttgctaatttaatga 16533587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22298722 - 22298680
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  22298722 gggtatttttgtcaattcccatgtcattttgctaatttgatga 22298680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 33871519 - 33871477
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  33871519 gggtatttttgtccatttccatgccattttgctagtttgatga 33871477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 397
Target Start/End: Original strand, 33871590 - 33871626
Alignment:
Q  361 ttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||    
T  33871590 ttttgtccattcccatgtcattttgctaatttgatga 33871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 20857113 - 20857070
Alignment:
Q  355 gggtatttttgtccattcccatgcca-ttttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  20857113 gggtatttttgtcaattcccatgccatttttgctaatttgatga 20857070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 20857466 - 20857509
Alignment:
Q  355 gggtatttttgtccattcccatgcca-ttttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  20857466 gggtatttttgtcaattcccatgccatttttgctaatttgatga 20857509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 43625605 - 43625640
Alignment:
Q  190 tttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||| |||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaa 43625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 16533073 - 16533031
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||  |||||||||||||||||||||||| ||||    
T  16533073 gggtatttttgtgaattcccatgccattttgctaatttaatga 16533031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30893977 - 30893943
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  30893977 cttgcatatattatgcattgtctttacaaactgag 30893943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20206559 - 20206526
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactga 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  20206559 cttgcatatattatgcattgtctctaccaactga 20206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 28468082 - 28467977
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28468082 accctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatc 28467983  T
Q  229 tcaaca 234  Q
    ||||||    
T  28467982 tcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 13992774 - 13992879
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13992774 accctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 13992873  T
Q  229 tcaaca 234  Q
    ||||||    
T  13992874 tcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 31495797 - 31495902
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  31495797 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 31495896  T
Q  229 tcaaca 234  Q
    ||||||    
T  31495897 tcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 31985232 - 31985126
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  31985232 accctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaaatc 31985133  T
Q  229 tcaacaa 235  Q
    |||||||    
T  31985132 tcaacaa 31985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 24742475 - 24742569
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  24742475 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 5148197 - 5148305
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||| |||||||| |||  ||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||||||||||||||| |     
T  5148197 accctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattt 5148296  T
Q  229 tcaacaaga 237  Q
    |||||||||    
T  5148297 tcaacaaga 5148305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 9224001 - 9223907
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9224001 cctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 9228788 - 9228694
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  9228788 cctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 51520948 - 51521042
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  51520948 cctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 51521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 56141613 - 56141519
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| |||||||| |  | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  56141613 cctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 56141519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 3814529 - 3814597
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3814529 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 3814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 5733158 - 5733239
Alignment:
Q  144 tcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||    
T  5733158 tcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 5733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18856234 - 18856301
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18856234 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 18860446 - 18860513
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18860513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 7122358 - 7122274
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  7122358 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 7124580 - 7124496
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  7124580 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 8393073 - 8392982
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  8393073 agctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 8395282 - 8395191
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  8395282 agctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 45347392 - 45347325
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  45347392 aatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaa 45347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 5135738 - 5135646
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaaga 237  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| | |||||||||||||    
T  5135738 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaacaaga 5135646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 5143807 - 5143867
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 8689097 - 8689045
Alignment:
Q  173 ccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8689045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 5137964 - 5137875
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||    
T  5137964 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 3778118 - 3778164
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3778118 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 3778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 16628400 - 16628354
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16628400 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 16628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 38151965 - 38151919
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38151965 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 38151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 5268743 - 5268700
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5268743 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 6742943 - 6742897
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  6742943 tcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaa 6742897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 10047935 - 10047981
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10047935 tcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaa 10047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 16622821 - 16622775
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  16622821 tcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaa 16622775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 23455134 - 23455092
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23455134 gggtatttttgtccattcccatgccattttgctaatttgatga 23455092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 27069090 - 27069048
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27069090 gggtatttttgtccattcccatgccattttgctaatttgatga 27069048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 27069156 - 27069198
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27069156 gggtatttttgtccattcccatgccattttgctaatttgatga 27069198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 39666956 - 39666914
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39666956 gggtatttttgtccattcccatgccattttgctaatttgatga 39666914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 50504005 - 50503963
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  50504005 gggtatttttgtccattcccatgccattttgctaatttgatga 50503963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 40316911 - 40316956
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40316911 gggtatttttgtccattcccatgtcattttgctaatttgatgatgt 40316956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 40326985 - 40327030
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40326985 gggtatttttgtccattcccatgtcattttgctaatttgatgatgt 40327030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 51859587 - 51859542
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  51859587 gggtatttttgtccattctcatgccattttgctaatttgatgatgt 51859542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 29761185 - 29761240
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  29761185 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag-caaatatcaacaa 29761240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 147495 - 147457
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||    
T  147495 atttttgtccattcccatgccattttgctaatttgatga 147457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 10408069 - 10408027
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  10408069 gggtatttttgtccatttccatgccattttgctaatttgatga 10408027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 11524129 - 11524087
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  11524129 gggtatttttgtctattcccatgccattttgctaatttgatga 11524087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 22718185 - 22718227
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  22718185 gggtatttttgtccattcccatgtcattttgctaatttgatga 22718227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 23455609 - 23455651
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  23455609 gggtatttttgtccattcccatgtcattttgctaatttgatga 23455651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 32063584 - 32063626
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  32063584 gggtatttttgtccattctcatgccattttgctaatttgatga 32063626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 38982516 - 38982558
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  38982516 gggtatttttgtcaattcccatgccattttgctaatttgatga 38982558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 39701089 - 39701047
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  39701089 gggtgtttttgtccattcccatgccattttgctaatttgatga 39701047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 45463253 - 45463211
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  45463253 gggtatttttgtccattcccatgctattttgctaatttgatga 45463211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 45463319 - 45463361
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  45463319 gggtgtttttgtccattcccatgccattttgctaatttgatga 45463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 50504071 - 50504113
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  50504071 gggtatttttgtccattcccatgtcattttgctaatttgatga 50504113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 52573408 - 52573366
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  52573408 gggtatttttgtccattctcatgccattttgctaatttgatga 52573366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 52815843 - 52815801
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  52815843 gggtatttttgtcaattcccatgccattttgctaatttgatga 52815801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 52816343 - 52816385
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  52816343 gggtatttttgtcaattcccatgccattttgctaatttgatga 52816385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 54858806 - 54858848
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  54858806 gggtatttttgtccattcacatgccattttgctaatttgatga 54858848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 54867748 - 54867794
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  54867748 tcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaa 54867794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 56556762 - 56556720
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  56556762 gggtatttttgtcaattcccatgccattttgctaatttgatga 56556720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 39667023 - 39667064
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  39667023 ggtatttttgtccattctcatgccattttgctaatttgatga 39667064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 361 - 397
Target Start/End: Original strand, 51859658 - 51859694
Alignment:
Q  361 ttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||    
T  51859658 ttttgtccattcccatgccattttgctaatttgatga 51859694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 9194167 - 9194214
Alignment:
Q  179 tcgtgtcacgatttctctgttcttcc-aaaccacaaatttgaagccaa 225  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  9194167 tcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaa 9194214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 9731461 - 9731500
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  9731461 tatttttgttcattcccatgccattttgctaatttgatga 9731500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 18712357 - 18712294
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttct 194  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||    
T  18712357 cctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 18712294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 27891761 - 27891722
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  27891761 tatttttgtccattcccatgtcattttgctaatttgatga 27891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 36314758 - 36314715
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 222  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  36314758 tcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 36328967 - 36328924
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 222  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  36328967 tcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 395
Target Start/End: Complemental strand, 3032760 - 3032722
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgat 395  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  3032760 gtatttttgtccattcctatgccattttgctaatttgat 3032722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 358 - 392
Target Start/End: Original strand, 11524198 - 11524232
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaattt 392  Q
    |||||||||||||||||||||||||||||||||||    
T  11524198 tatttttgtccattcccatgccattttgctaattt 11524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22987031 - 22986989
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  22987031 gggtatttttgtctattcccatgtcattttgctaatttgatga 22986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 30641697 - 30641655
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  30641697 gggtaattttgtccattcccatgacattttgctaatttgatga 30641655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 39701155 - 39701197
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  39701155 gggtatttttgtccattcccatactattttgctaatttgatga 39701197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 52573474 - 52573516
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  52573474 gggtatttttgtccattctcatgccatattgctaatttgatga 52573516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 54858740 - 54858698
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  54858740 gggtatttttgtctgttcccatgccattttgctaatttgatga 54858698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 56557245 - 56557287
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  56557245 gggtatttttgtcaattcctatgccattttgctaatttgatga 56557287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 5396213 - 5396176
Alignment:
Q  185 cacgatttctctgttcttccaaaccacaaatttgaagc 222  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5396213 cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 10408135 - 10408180
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||    
T  10408135 gggtatttttgtccattctcatatcattttgctaatttgatgatgt 10408180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 50751750 - 50751791
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  50751750 atttttgtccattcccatgctattttgttaatttgatgatgt 50751791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 5818024 - 5818060
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttga 394  Q
    |||||||||| ||||||||||||||||||||||||||    
T  5818024 tatttttgtctattcccatgccattttgctaatttga 5818060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 148007 - 148045
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  148007 atttttgtccattttcatgccattttgctaatttgatga 148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17423194 - 17423228
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  17423194 cttgcatatattatgcattgtctctaccaactgag 17423228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21317355 - 21317389
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  21317355 cttgcatatattatgcattgtctctaccaactgag 21317389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 41520998 - 41520964
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  41520998 cttgcatatattatgcattgtctctaccaactgag 41520964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 55867362 - 55867404
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||    
T  55867362 gggtatttttgtcaattccaatgtcattttgctaatttgatga 55867404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 5143782 - 5143823
Alignment:
Q  130 ccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 171  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  5143782 ccctgcaaaccagctcacgacattgcaaaatcgtgtcacgat 5143823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11286798 - 11286831
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactga 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  11286798 cttgcatatattatgcattgtctctaccaactga 11286831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 11447977 - 11448022
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| |||  |||||||||||| ||||||||||||||    
T  11447977 gggtatttttgtcaattttcatgccattttgttaatttgatgatgt 11448022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 19997382 - 19997414
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  19997382 ttgcatatattatgcattgtctctaccaactga 19997414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 394
Target Start/End: Complemental strand, 38813731 - 38813695
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttga 394  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  38813731 tatttttgtcaattcccatgtcattttgctaatttga 38813695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 24202356 - 24202251
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24202356 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatc 24202257  T
Q  229 tcaaca 234  Q
    ||||||    
T  24202256 tcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 19361017 - 19360912
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  19361017 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatc 19360918  T
Q  229 tcaaca 234  Q
    ||||||    
T  19360917 tcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 19365873 - 19365768
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  19365873 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatc 19365774  T
Q  229 tcaaca 234  Q
    ||||||    
T  19365773 tcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 51765095 - 51764989
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  51765095 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatc 51764996  T
Q  229 tcaacaa 235  Q
    |||||||    
T  51764995 tcaacaa 51764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 13604197 - 13604095
Alignment:
Q  132 ctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctca 231  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13604197 ctgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctca 13604098  T
Q  232 aca 234  Q
    |||    
T  13604097 aca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 20622716 - 20622821
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  20622716 accctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatc 20622815  T
Q  229 tcaaca 234  Q
    ||||||    
T  20622816 tcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 40282063 - 40281958
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  40282063 accctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatc 40281964  T
Q  229 tcaaca 234  Q
    ||||||    
T  40281963 tcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 9986887 - 9986785
Alignment:
Q  132 ctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctca 231  Q
    ||||| |||||||||||||| ||| ||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  9986887 ctgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctca 9986788  T
Q  232 aca 234  Q
    |||    
T  9986787 aca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 41391084 - 41391178
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    |||||||||  |||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41391084 cctgcaaactggctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 21053632 - 21053540
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  21053632 agctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 39445992 - 39446074
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39445992 gctcacggcatctcaaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 9036107 - 9036003
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||    
T  9036107 accctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatc 9036009  T
Q  229 tcaaca 234  Q
    ||||||    
T  9036008 tcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 26644483 - 26644382
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| ||| |||||||||||||| | ||| |||||||||||| |||||| |||| |||| |||||||| ||||||||||||||||||||||||| |||||    
T  26644483 ttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagcc 26644384  T
Q  224 aa 225  Q
    ||    
T  26644383 aa 26644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 44023452 - 44023385
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  44023452 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 21536190 - 21536119
Alignment:
Q  156 aaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||||| ||   || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21536190 aaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 44203293 - 44203217
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  44203293 aatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 44203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1054589 - 1054522
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  1054589 aatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaa 1054522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 25439489 - 25439407
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||| |||| ||||||||||||  | || ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25439489 gctcacggcatctcaaa-tcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 25444682 - 25444600
Alignment:
Q  142 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||| |||| ||||||||||||  | || ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25444682 gctcacggcatctcaaa-tcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 13598970 - 13599016
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13598970 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 13599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 49955527 - 49955482
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  49955527 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 49955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 3282276 - 3282332
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||    
T  3282276 tcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaa 3282332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 37070337 - 37070392
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  37070337 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 7371470 - 7371428
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7371470 gggtatttttgtccattcccatgccattttgctaatttgatga 7371428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 8898697 - 8898655
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8898697 gggtatttttgtccattcccatgccattttgctaatttgatga 8898655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 17189134 - 17189092
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17189134 gggtatttttgtccattcccatgccattttgctaatttgatga 17189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 24793720 - 24793674
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  24793720 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24793674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 31058303 - 31058345
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31058303 gggtatttttgtccattcccatgccattttgctaatttgatga 31058345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 35040860 - 35040902
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35040860 gggtatttttgtccattcccatgccattttgctaatttgatga 35040902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 40714624 - 40714582
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40714624 gggtatttttgtccattcccatgccattttgctaatttgatga 40714582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 49955593 - 49955635
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49955593 gggtatttttgtccattcccatgccattttgctaatttgatga 49955635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 46282713 - 46282758
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  46282713 gggtatttttgtcaattcccatgccattttgctaatttgatgatgt 46282758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 35038632 - 35038593
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35038632 tatttttgtccattcccatgccattttgctaatttgatga 35038593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 41398767 - 41398814
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  41398767 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 45750091 - 45750130
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45750091 tatttttgtccattcccatgccattttgctaatttgatga 45750130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 5734189 - 5734147
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  5734189 gggtatttttgtccattcccatgccattttgttaatttgatga 5734147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 20760752 - 20760794
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  20760752 ggtatttttgtccattcccatgtcattttgctaatttgatgat 20760794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 28324984 - 28324942
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  28324984 gggtatttttgtccatttccatgccattttgctaatttgatga 28324942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 45750022 - 45749980
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  45750022 gggtatttttgtccattctcatgccattttgctaatttgatga 45749980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 46282251 - 46282209
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  46282251 gggtatttttgtcaattcccatgccattttgctaatttgatga 46282209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 49093221 - 49093179
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  49093221 gggtatttttgtcaattcccatgccattttgctaatttgatga 49093179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 49093733 - 49093775
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  49093733 gggtatttttgtcaattcccatgccattttgctaatttgatga 49093775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 13659846 - 13659889
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  13659846 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 13659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 30326673 - 30326634
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  30326673 tatttttgtccattcccatgtcattttgctaatttgatga 30326634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 32132481 - 32132442
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32132481 tatttttgtccattcccatgacattttgctaatttgatga 32132442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 37929595 - 37929556
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37929595 tatttttgtccattctcatgccattttgctaatttgatga 37929556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 8898763 - 8898805
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  8898763 gggtatttttgtccattcccgtgtcattttgctaatttgatga 8898805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 12905905 - 12905947
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  12905905 gggtatttttgtccattctcatgccattttgttaatttgatga 12905947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 16124235 - 16124197
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaattt 217  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  16124235 tcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 40714690 - 40714731
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  40714690 gggtatttttgtccattcc-atgccattttgctaatttgatga 40714731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 50062383 - 50062341
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  50062383 gggtatttttgtcaattcccatgtcattttgctaatttgatga 50062341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 50062868 - 50062910
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  50062868 gggtatttttgtcaattctcatgccattttgctaatttgatga 50062910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 43988023 - 43987947
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| ||||||| || | ||||||| ||||| ||| ||||||||||||||||||||||| | |||||||    
T  43988023 atcgtgtcacgattgccaaat-cgcgacacgattcctctgctctcccaaaccacaaatttgaagccaattttcaacaa 43987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 46899237 - 46899196
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  46899237 atttttgtccattcccatgccattttgtttatttgatgatgt 46899196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 28325053 - 28325092
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  28325053 tatttttgtccattcctatgtcattttgctaatttgatga 28325092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10990714 - 10990756
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgaggcaaactc 43  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||    
T  10990714 cttgcatatattatgcattgtccctacaaattgaggtaaactc 10990756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 13295315 - 13295273
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||    
T  13295315 gggtatttttgtctatttccatgtcattttgctaatttgatga 13295273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 13775628 - 13775662
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  13775628 cttgcatatattatgcattgtctctactaactgag 13775662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 29652384 - 29652418
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaa 213  Q
    |||| ||||||||||||||||||||||||||||||    
T  29652384 tcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44678034 - 44678068
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  44678034 cttgcatatattatgcattgtctatacaaactgag 44678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 46899852 - 46899890
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  46899852 atttttgttcattcccatgccattttactaatttgatga 46899890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 28455371 - 28455403
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  28455371 ttgcatatattatgcattgtctctaccaactga 28455403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 32864335 - 32864303
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  32864335 ttgcatatattatgcattgtctctaccaactga 32864303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 8016 - 7911
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  8016 accctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatc 7917  T
Q  229 tcaaca 234  Q
    ||||||    
T  7916 tcaaca 7911  T

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Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 26288412 - 26288518
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  26288412 accctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtc 26288511  T
Q  229 tcaacaa 235  Q
    |||||||    
T  26288512 tcaacaa 26288518  T

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Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 26301669 - 26301775
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  26301669 accctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtc 26301768  T
Q  229 tcaacaa 235  Q
    |||||||    
T  26301769 tcaacaa 26301775  T

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Target: chr8; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 26313663 - 26313769
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  26313663 accctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtc 26313762  T
Q  229 tcaacaa 235  Q
    |||||||    
T  26313763 tcaacaa 26313769  T

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Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 7412842 - 7412952
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  7412842 ttgacaccctgcaaaccagctcacggcattacagaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtc 7412941  T
Q  224 aaatctcaaca 234  Q
    |||| ||||||    
T  7412942 aaatttcaaca 7412952  T

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Target: chr8; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 2627419 - 2627318
Alignment:
Q  133 tgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaa 232  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  2627419 tgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaa 2627320  T
Q  233 ca 234  Q
    ||    
T  2627319 ca 2627318  T

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Target: chr8; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 31043013 - 31042908
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  31043013 accctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagaccacaaatttgaagtcaaatc 31042914  T
Q  229 tcaaca 234  Q
    ||||||    
T  31042913 tcaaca 31042908  T

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Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 1261519 - 1261414
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||     
T  1261519 accctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaata 1261420  T
Q  229 tcaaca 234  Q
    ||||||    
T  1261419 tcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 33037389 - 33037295
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  33037389 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 33037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 36979912 - 36980006
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36979912 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 36980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 4759636 - 4759542
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4759636 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4759542  T

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Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 10683841 - 10683747
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  10683841 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10683747  T

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Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 18870123 - 18870029
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| |||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18870123 cctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18870029  T

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Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 30656180 - 30656274
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  30656180 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 3439192 - 3439088
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  3439192 accctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac-aatc 3439094  T
Q  229 tcaaca 234  Q
    ||||||    
T  3439093 tcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 6311833 - 6311927
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  6311833 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 6311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 18852729 - 18852635
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| |   ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  18852729 cctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaa 18852635  T

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Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 39784400 - 39784333
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39784400 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 7289503 - 7289439
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  7289503 aaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

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Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 25327740 - 25327672
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  25327740 aaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25327672  T

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Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 42575820 - 42575909
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  42575820 ctcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 42575909  T

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Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 15290232 - 15290143
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||||||| | || ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  15290232 ctcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 15470601 - 15470512
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | |||||||||| | || ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  15470601 ctcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 5702006 - 5701960
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5702006 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 34177218 - 34177263
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34177218 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 34177263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 4456578 - 4456625
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  4456578 tcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 10688672 - 10688626
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  10688672 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 15230177 - 15230219
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15230177 gggtatttttgtccattcccatgccattttgctaatttgatga 15230219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 35634345 - 35634387
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35634345 gggtatttttgtccattcccatgccattttgctaatttgatga 35634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 34214448 - 34214493
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  34214448 gggtatttttgtcaattcccatgccattttgctaatttgatgatgt 34214493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 39474725 - 39474680
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  39474725 gggtatttttgtccatttccatgccattttgctaatttgatgatgt 39474680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 15230111 - 15230071
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgat 395  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15230111 gggtatttttgtccattcccatgccattttgctaatttgat 15230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 25689615 - 25689560
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  25689615 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagac-aatctcaacaa 25689560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 35745904 - 35745979
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  35745904 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 2535800 - 2535843
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  2535800 gtatttttgtccattcccatgccattttactaatttgatgatgt 2535843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 10445581 - 10445623
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  10445581 gggtatttttgtccatttccatgccattttgctaatttgatga 10445623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 11762020 - 11761978
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11762020 gggtatttttgtccattcccatgctattttgctaatttgatga 11761978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 25124809 - 25124851
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  25124809 gggtatttttgtccattcccatgtcattttgctaatttgatga 25124851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 34213944 - 34213902
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  34213944 gggtatttttgtcaattcccatgccattttgctaatttgatga 34213902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 34665950 - 34665908
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  34665950 gggtatttttgtcaattcccatgccattttgctaatttgatga 34665908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 42945294 - 42945252
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  42945294 gggtatttttgtccattcccatgccattttactaatttgatga 42945252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 42945360 - 42945402
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  42945360 gggtatttttgtccattcccatgccattttactaatttgatga 42945402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Complemental strand, 21432872 - 21432831
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  21432872 ggtatttttgtccatttccatgccattttgctaatttgatga 21432831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 19175279 - 19175232
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  19175279 tcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaaa 19175232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 44664685 - 44664646
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  44664685 tatttttgtccattcccgtgccattttgctaatttgatga 44664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 44664757 - 44664796
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  44664757 tatttttgtccattcccatgccattttgctaatctgatga 44664796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 8997943 - 8997977
Alignment:
Q  363 ttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||    
T  8997943 ttgtccattcccatgccattttgctaatttgatga 8997977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 23799146 - 23799100
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  23799146 tcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaa 23799100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 27500268 - 27500226
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  27500268 gggtatttttgtccattctcatgtcattttgctaatttgatga 27500226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 34176621 - 34176579
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  34176621 gggtatttttgtcctttcccaagccattttgctaatttgatga 34176579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 34666461 - 34666503
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  34666461 gggtatttttgtcaattctcatgccattttgctaatttgatga 34666503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 37542404 - 37542362
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  37542404 gggtatttttgttcattcccatgccattttgttaatttgatga 37542362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 2534875 - 2534830
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||    
T  2534875 gggtatttttgtcaatttccataccattttgctaatttgatgatgt 2534830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 41353820 - 41353861
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  41353820 ggtatttttgtccattctcatgtcattttgctaatttgatga 41353861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 7294278 - 7294238
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatgat 398  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  7294278 tatttttgtccattcttatgccattttgctaatttgatgat 7294238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 21432939 - 21432979
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgat 395  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  21432939 gggtatttttatccattcccatgtcattttgctaatttgat 21432979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 38003701 - 38003745
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||    
T  38003701 ggtatttttgtctattctcatgccattttgctaatttgataatgt 38003745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 6471867 - 6471828
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  6471867 tatttttatccattcccatgtcattttgctaatttgatga 6471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 27500334 - 27500376
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  27500334 gggtatttttgcccattcccatgcaatttttctaatttgatga 27500376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 37015853 - 37015887
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  37015853 cttgcatatattatgcattgtctctaccaactgag 37015887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 38003635 - 38003593
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| | || ||||||||||||||||||||    
T  38003635 gggtatttttgtccatttctataccattttgctaatttgatga 38003593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Original strand, 6471936 - 6471976
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgat 395  Q
    ||||||||||||| |||||||||| |||||| |||||||||    
T  6471936 gggtatttttgtcaattcccatgctattttgttaatttgat 6471976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 25124741 - 25124701
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  25124741 gtatttttgtcaattcccatatcattttgctaatttgatga 25124701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33996112 - 33996080
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  33996112 ttgcatatattatgcattgtctctaccaactga 33996080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 35700413 - 35700445
Alignment:
Q  2 ttgcatatattatgcattgtctctacaaactga 34  Q
    |||||||||||||||||||||||||| ||||||    
T  35700413 ttgcatatattatgcattgtctctaccaactga 35700445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 6097881 - 6097987
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  6097881 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaagacaaatc 6097980  T
Q  229 tcaacaa 235  Q
    |||||||    
T  6097981 tcaacaa 6097987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 22709540 - 22709645
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  22709540 accctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatc 22709639  T
Q  229 tcaaca 234  Q
    ||||||    
T  22709640 tcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 5674334 - 5674228
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |     
T  5674334 accctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaacta 5674235  T
Q  229 tcaacaa 235  Q
    |||||||    
T  5674234 tcaacaa 5674228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 2171999 - 2172104
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||    
T  2171999 accctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatc 2172098  T
Q  229 tcaaca 234  Q
    ||||||    
T  2172099 tcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 3073238 - 3073343
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  3073238 accctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatc 3073337  T
Q  229 tcaaca 234  Q
    ||||||    
T  3073338 tcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 26253694 - 26253589
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||| ||| | ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  26253694 accctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaaatc 26253595  T
Q  229 tcaaca 234  Q
    ||||||    
T  26253594 tcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 23896847 - 23896957
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| ||||||||||||| ||||||  || |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |    
T  23896847 ttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggc 23896946  T
Q  224 aaatctcaaca 234  Q
    |||| ||||||    
T  23896947 aaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 30125120 - 30125026
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  30125120 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30125026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 411790 - 411684
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    |||||||| || ||||||||||| ||| |||| ||||||| |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  411790 accctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatc 411691  T
Q  229 tcaacaa 235  Q
    |||||||    
T  411690 tcaacaa 411684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 11857465 - 11857559
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||| ||||||||||  |   ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  11857465 cctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11857559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 27647572 - 27647467
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||| |    
T  27647572 accctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaac 27647473  T
Q  229 tcaaca 234  Q
    ||||||    
T  27647472 tcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 14742002 - 14741934
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14742002 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 22010265 - 22010197
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22010265 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 16578997 - 16579102
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||    
T  16578997 accctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatc 16579095  T
Q  229 tcaacaa 235  Q
    |||||||    
T  16579096 tcaacaa 16579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 16616383 - 16616278
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatc 228  Q
    ||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||    
T  16616383 accctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatc 16616285  T
Q  229 tcaacaa 235  Q
    |||||||    
T  16616284 tcaacaa 16616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 5757061 - 5756950
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| ||||||||||||| |||||| ||| ||||||| |||||||||||||| | ||||||||| |||||||| |||||  |||||| |||||| |||||    
T  5757061 ttgacaccctgcaaaccaactcacgacattacaaaattgtgtcacgatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagcc 5756962  T
Q  224 aaatctcaacaa 235  Q
    |||| |||||||    
T  5756961 aaatttcaacaa 5756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 6136456 - 6136548
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||||| | |||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  6136456 agctcacggcatc-cgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacaa 6136548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 34166755 - 34166673
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  34166755 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 16554546 - 16554454
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | | ||||||||||||||| ||||| || |||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  16554546 agctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 16631102 - 16631010
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||| | | ||||||||||||||| ||||| || |||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  16631102 agctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 6439008 - 6439075
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||| |||| ||||||||||||||    
T  6439008 aatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaa 6439075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 13150938 - 13150856
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaa 226  Q
    ||||||||||| | |||||| |||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  13150938 ctcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 5343990 - 5344056
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| | || ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaa 5344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 25420888 - 25420797
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||| | ||||| | ||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  25420888 agctcacggcatc-cgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 33342597 - 33342688
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | |||||| ||| |||| ||||| |||||||||||||||  |||||||||||||||||||||||||| | ||||||||||    
T  33342597 agctcacggcatc-cgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 34151917 - 34151827
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||| | |||||| |||||||| ||| | ||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||    
T  34151917 ctcacggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaa 34151827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 34164533 - 34164443
Alignment:
Q  143 ctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    ||||||||||| | |||||| |||||||| ||| | ||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||    
T  34164533 ctcacggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaa 34164443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 5017023 - 5016977
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5017023 tcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 5016977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 5266599 - 5266645
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  5266599 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 5266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 7905489 - 7905531
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7905489 gggtatttttgtccattcccatgccattttgctaatttgatga 7905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 12065400 - 12065358
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12065400 gggtatttttgtccattcccatgccattttgctaatttgatga 12065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 14737139 - 14737093
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14737139 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14737093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 15913794 - 15913836
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15913794 gggtatttttgtccattcccatgccattttgctaatttgatga 15913836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 21836210 - 21836168
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21836210 gggtatttttgtccattcccatgccattttgctaatttgatga 21836168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 31086000 - 31085954
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  31086000 tcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaa 31085954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 400
Target Start/End: Original strand, 4117467 - 4117512
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  4117467 gggtatttttgtcaattcccatgccattttgctaatttgatgatgt 4117512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 6026910 - 6026834
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| |||||  | ||||||||||||||| || |||||||||||||||||||||||| | ||||||||||    
T  6026910 aaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagac-aatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 16839256 - 16839331
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  16839256 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 33330007 - 33329932
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| ||||||| || | ||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  33330007 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 7160984 - 7160942
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  7160984 gggtatttttgtccattcccatgctattttgctaatttgatga 7160942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 7905423 - 7905381
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  7905423 gggtatttttgtccattcccgtgccattttgctaatttgatga 7905381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 8089623 - 8089581
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  8089623 gggtatttttgtccattcccatgccattttgttaatttgatga 8089581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 14657129 - 14657171
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  14657129 gggtatttttgtcaattcccatgccattttgctaatttgatga 14657171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 20651186 - 20651148
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20651186 atttttgtccattcccatgccattttgctaatttgatga 20651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 22503020 - 22503062
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  22503020 gggtatttttgtccattcccatgtcattttgctaatttgatga 22503062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 28155144 - 28155098
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  28155144 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 28155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 31407058 - 31407016
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  31407058 gggtatttttgtccatttccatgccattttgctaatttgatga 31407016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 31407124 - 31407166
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31407124 gggtatttttgtccattcccatgtcattttgctaatttgatga 31407166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 33400146 - 33400104
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  33400146 gggtatttttgtcaattcccatgccattttgctaatttgatga 33400104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 6005932 - 6006008
Alignment:
Q  159 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||||||||||| ||||||| ||| | ||||||| ||||||| ||||||||||||||||||||||||| | |||||||    
T  6005932 atcgtgtcacgattgccaaa-tcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaacaa 6006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 7161051 - 7161092
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  7161051 ggtatttttgtccattcccatgcaattttgctaatttgatga 7161092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 24714941 - 24714997
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccac-aaatttgaagccaaatctcaaca 234  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||    
T  24714941 tcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaaca 24714997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 33335477 - 33335429
Alignment:
Q  186 acgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  33335477 acgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 6517679 - 6517640
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  6517679 tatttttgttcattcccatgccattttgctaatttgatga 6517640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 10781407 - 10781446
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  10781407 tatttttgtccattcccatgccattttgcgaatttgatga 10781446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 21836279 - 21836318
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  21836279 tatttttgtccattcccatgccattttgttaatttgatga 21836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 1661350 - 1661392
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  1661350 gggtatttttgtcaattcccatgccattttgataatttgatga 1661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 14656660 - 14656618
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  14656660 gggtatttttgtcaattcccatgccattttactaatttgatga 14656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 15913728 - 15913686
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  15913728 gggtatttttgtcaatttccatgccattttgctaatttgatga 15913686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 18234653 - 18234699
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||    
T  18234653 tcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaa 18234699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 22502954 - 22502912
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  22502954 gggtatttttgtccattctcataccattttgctaatttgatga 22502912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 4116979 - 4116934
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatgatgt 400  Q
    ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  4116979 gggtatttttgtcaattcccacgccattttgctaatttgataatgt 4116934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 5571803 - 5571755
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 227  Q
    |||||||||||||||||| |||| ||||| ||||||||||||| |||||    
T  5571803 tcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaat 5571755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 10076769 - 10076673
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||| |||||| || |||  |||||||||| |||| ||   || || ||||||||||| ||||||||| |||| ||||||||| |||||||    
T  10076769 accctgcaaaacagctctcgacattgcaaaatcgtgacacgctgatgaaatcatgtcacgatttttctgttctttcaaaacacaaatttaaagccaa 10076673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 21272514 - 21272470
Alignment:
Q  181 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaa 21272470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 16652770 - 16652716
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||||| |||||||| || ||||||||||||||| | ||||||||||    
T  16652770 tcgtgtcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 31980094 - 31980141
Alignment:
Q  187 cgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| ||||||    
T  31980094 cgatttctctgttctcccaaaacacaaatttgaagacaaatatcaaca 31980141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 390
Target Start/End: Original strand, 33400874 - 33400909
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaat 390  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33400874 gggtatttttgtcaattcccatgccattttgctaat 33400909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 33401045 - 33401088
Alignment:
Q  355 gggtatttttgtccattcccatgcca-ttttgctaatttgatga 397  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  33401045 gggtatttttgtcaattcccatgccatttttgctaatttgatga 33401088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 331903 - 331937
Alignment:
Q  1 cttgcatatattatgcattgtctctacaaactgag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  331903 cttgcatatattatgcattgtctctaccaactgag 331937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 603775 - 603809
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaa 213  Q
    ||||||||||||||||||||||||||||| |||||    
T  603775 tcgtgtcacgatttctctgttcttccaaaacacaa 603809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 13379734 - 13379772
Alignment:
Q  359 atttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  13379734 atttttgtccattcccaaaccattttgctaatttgatga 13379772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 79; Significance: 8e-37; HSPs: 6)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 132854 - 132752
Alignment:
Q  132 ctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctca 231  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  132854 ctgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctca 132755  T
Q  232 aca 234  Q
    |||    
T  132754 aca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 6255 - 6301
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6255 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 3063 - 3109
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  3063 tcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaa 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 221969 - 221927
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  221969 gggtatttttgttcattcccatgccattttgctaatttgatga 221927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 222035 - 222077
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  222035 gggtatttttgtccattcccatgccattttgttaatttgatga 222077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 149607 - 149650
Alignment:
Q  182 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  149607 tgtcacgatttctctgtttctccaaaccacaaatttgaagccaa 149650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 22042 - 21939
Alignment:
Q  131 cctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctc 230  Q
    ||||||||| ||||||||||| | | |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  22042 cctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctc 21943  T
Q  231 aaca 234  Q
    ||||    
T  21942 aaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 43544 - 43441
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| |||||| ||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||||    
T  43544 ttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagcc 43445  T
Q  224 aaat 227  Q
    ||||    
T  43444 aaat 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 36384 - 36323
Alignment:
Q  174 caaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 1193 - 1083
Alignment:
Q  124 ttgagaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcc 223  Q
    |||| ||||||||||||| ||||||  || |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |    
T  1193 ttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggc 1094  T
Q  224 aaatctcaaca 234  Q
    |||| ||||||    
T  1093 aaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 587 - 519
Alignment:
Q  129 accctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 197  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  587 accctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctg 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 34630 - 34562
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  34630 aaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1784 - 1717
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1717  T

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Target: scaffold0464 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 870 - 937
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  870 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 937  T

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Target: scaffold0098 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 45751 - 45805
Alignment:
Q  181 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45751 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 45805  T

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Target: scaffold0565 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 3094 - 3185
Alignment:
Q  141 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  3094 agctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3185  T

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Target: scaffold0355 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 3413 - 3345
Alignment:
Q  157 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  3413 aaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaa 3345  T

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Target: scaffold0674 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 4233 - 4310
Alignment:
Q  156 aaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||||| ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  4233 aaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 4310  T

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Target: scaffold0771 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 1100 - 1058
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1100 gggtatttttgtccattcccatgccattttgctaatttgatga 1058  T

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Target: scaffold0665 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 8219 - 8265
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  8219 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8265  T

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Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 11320 - 11278
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11320 gggtatttttgtccattcccatgccattttgctaatttgatga 11278  T

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Target: scaffold0328; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 11386 - 11428
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11386 gggtatttttgtccattcccatgccattttgctaatttgatga 11428  T

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Target: scaffold0137 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 5934 - 5859
Alignment:
Q  158 aatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    |||||||||||||  ||||| ||||| ||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  5934 aatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 5859  T

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Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 20035 - 19995
Alignment:
Q  357 gtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20035 gtatttttgtccattcccatgccattttgctaatttgatga 19995  T

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Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 2570 - 2533
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgat 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2570 tatttttgtccattcccatgccattttgctaatttgat 2533  T

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Target: scaffold0197 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 18738 - 18663
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 234  Q
    ||||||||||||| ||||||| || | ||||||| ||||||||| ||||||||||||||||||||||| | ||||||    
T  18738 atcgtgtcacgattgccaaat-cgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 18663  T

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Target: scaffold0197; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 13858 - 13796
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||   |||| ||||| ||||||| ||||||||| ||||||||| |||||||||    
T  13858 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

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Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 1813 - 1751
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||| |||||||||    
T  1813 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

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Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 12029 - 12068
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12029 tatttttgtccattctcatgccattttgctaatttgatga 12068  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 86156 - 86203
Alignment:
Q  179 tcgtgtcacgatttctctgttcttccaaaccac-aaatttgaagccaa 225  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  86156 tcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaa 86203  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 148518 - 148456
Alignment:
Q  159 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||| |||||||||    
T  148518 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

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Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 12486 - 12527
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  12486 ggtatttttgtctattcccatgtcattttgctaatttgatga 12527  T

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Target: scaffold0388; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 12416 - 12377
Alignment:
Q  358 tatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  12416 tatttttgtccatttccatgtcattttgctaatttgatga 12377  T

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Target: scaffold0775 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 5142 - 5100
Alignment:
Q  355 gggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    |||||||||||||| || ||||| |||||||||||||||||||    
T  5142 gggtatttttgtccttttccatgtcattttgctaatttgatga 5100  T

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Target: scaffold0775; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 6227 - 6268
Alignment:
Q  356 ggtatttttgtccattcccatgccattttgctaatttgatga 397  Q
    ||||||||||||| |||| |||||| ||||||||||||||||    
T  6227 ggtatttttgtcctttcctatgccactttgctaatttgatga 6268  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 176524 - 176462
Alignment:
Q  159 atcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 221  Q
    ||||||||||||   |||| ||||| ||||||| ||||||||| ||||||||| |||||||||    
T  176524 atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

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