View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5261_low_11 (Length: 369)

Name: NF5261_low_11
Description: NF5261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5261_low_11
NF5261_low_11
[»] chr7 (79 HSPs)
chr7 (3-360)||(1448741-1449099)
chr7 (63-360)||(35667143-35667441)
chr7 (5-360)||(22927781-22928138)
chr7 (4-360)||(26492173-26492531)
chr7 (28-360)||(35496086-35496420)
chr7 (4-360)||(42311088-42311446)
chr7 (4-360)||(26583522-26583875)
chr7 (4-360)||(46821822-46822181)
chr7 (6-360)||(20116393-20116748)
chr7 (4-360)||(23085330-23085687)
chr7 (4-360)||(21266200-21266556)
chr7 (28-360)||(45198944-45199276)
chr7 (28-360)||(48207736-48208066)
chr7 (41-360)||(42066973-42067292)
chr7 (32-350)||(1485178-1485497)
chr7 (71-359)||(42408237-42408527)
chr7 (26-360)||(46338883-46339220)
chr7 (68-360)||(23425284-23425576)
chr7 (28-360)||(433602-433935)
chr7 (4-360)||(2843152-2843496)
chr7 (28-360)||(14627790-14628125)
chr7 (127-360)||(23786508-23786741)
chr7 (27-360)||(31235695-31236039)
chr7 (137-360)||(6558817-6559043)
chr7 (4-360)||(32684491-32684834)
chr7 (135-360)||(17222911-17223136)
chr7 (27-360)||(6001851-6002195)
chr7 (162-360)||(34773679-34773877)
chr7 (33-360)||(32521840-32522170)
chr7 (56-360)||(35261157-35261463)
chr7 (203-360)||(19560007-19560164)
chr7 (145-302)||(17611076-17611233)
chr7 (162-360)||(7640686-7640881)
chr7 (128-360)||(46818330-46818561)
chr7 (68-360)||(20083204-20083504)
chr7 (132-264)||(17499666-17499799)
chr7 (132-264)||(17553415-17553548)
chr7 (264-360)||(13592420-13592515)
chr7 (41-204)||(36143711-36143875)
chr7 (4-99)||(12539129-12539224)
chr7 (72-235)||(3860828-3860991)
chr7 (172-272)||(24069425-24069525)
chr7 (162-272)||(969478-969588)
chr7 (169-225)||(37837533-37837589)
chr7 (126-234)||(1749220-1749328)
chr7 (164-234)||(3394426-3394496)
chr7 (126-225)||(24770161-24770262)
chr7 (248-357)||(46244185-46244292)
chr7 (107-234)||(1100804-1100931)
chr7 (169-225)||(8001621-8001677)
chr7 (169-225)||(9450212-9450268)
chr7 (124-190)||(7740568-7740635)
chr7 (130-234)||(35132861-35132965)
chr7 (116-272)||(5546279-5546437)
chr7 (200-234)||(22742928-22742962)
chr7 (200-234)||(24350910-24350944)
chr7 (200-234)||(28476211-28476245)
chr7 (107-234)||(1575113-1575242)
chr7 (252-357)||(43369687-43369791)
chr7 (169-225)||(19296830-19296886)
chr7 (169-225)||(30756894-30756950)
chr7 (169-225)||(34899682-34899738)
chr7 (169-225)||(39171665-39171721)
chr7 (200-276)||(41553461-41553537)
chr7 (200-276)||(41553806-41553882)
chr7 (169-225)||(42978570-42978626)
chr7 (185-278)||(3267237-3267327)
chr7 (126-234)||(48930686-48930791)
chr7 (130-179)||(43369858-43369908)
chr7 (127-167)||(7640887-7640928)
chr7 (169-222)||(12141386-12141439)
chr7 (116-167)||(286682-286734)
chr7 (169-225)||(26623865-26623921)
chr7 (169-225)||(39328865-39328921)
chr7 (200-272)||(41554155-41554227)
chr7 (162-234)||(44311860-44311932)
chr7 (161-225)||(45349874-45349938)
chr7 (281-357)||(46700118-46700193)
chr7 (169-225)||(47590271-47590327)
[»] chr4 (93 HSPs)
chr4 (4-360)||(10389665-10390022)
chr4 (4-360)||(25273695-25274061)
chr4 (32-360)||(34024349-34024677)
chr4 (5-360)||(867978-868340)
chr4 (4-360)||(9528788-9529147)
chr4 (28-360)||(53616561-53616896)
chr4 (7-360)||(43153925-43154286)
chr4 (4-360)||(6972630-6972988)
chr4 (11-360)||(4643683-4644036)
chr4 (32-360)||(38706621-38706951)
chr4 (28-360)||(31381583-31381916)
chr4 (14-358)||(37188508-37188851)
chr4 (33-360)||(51317834-51318163)
chr4 (9-360)||(43444218-43444570)
chr4 (4-359)||(20569072-20569432)
chr4 (4-360)||(50766423-50766780)
chr4 (32-360)||(10359459-10359788)
chr4 (4-360)||(1531726-1532086)
chr4 (4-360)||(9283731-9284089)
chr4 (6-341)||(9645479-9645816)
chr4 (34-360)||(35964887-35965214)
chr4 (28-360)||(44947247-44947590)
chr4 (107-357)||(8009275-8009525)
chr4 (116-360)||(29965566-29965813)
chr4 (110-354)||(14183729-14183974)
chr4 (28-360)||(2115499-2115833)
chr4 (32-296)||(56194444-56194715)
chr4 (28-355)||(21089996-21090315)
chr4 (5-316)||(2624318-2624631)
chr4 (27-360)||(12265297-12265640)
chr4 (107-360)||(18138825-18139079)
chr4 (107-360)||(49126038-49126292)
chr4 (177-360)||(47417657-47417840)
chr4 (107-360)||(32952662-32952912)
chr4 (191-360)||(49410232-49410401)
chr4 (32-290)||(35261036-35261299)
chr4 (116-360)||(46991042-46991287)
chr4 (107-360)||(49680460-49680715)
chr4 (186-360)||(45227952-45228126)
chr4 (116-359)||(52097828-52098076)
chr4 (125-359)||(3336076-3336304)
chr4 (33-360)||(27593740-27594076)
chr4 (36-179)||(47416736-47416881)
chr4 (132-264)||(1931723-1931856)
chr4 (4-147)||(5333657-5333797)
chr4 (248-357)||(23100745-23100853)
chr4 (169-276)||(28857377-28857484)
chr4 (68-296)||(41255355-41255584)
chr4 (74-147)||(5333585-5333658)
chr4 (134-272)||(36204415-36204558)
chr4 (74-177)||(1008185-1008289)
chr4 (107-182)||(35351250-35351326)
chr4 (200-276)||(52944317-52944393)
chr4 (304-360)||(56199218-56199274)
chr4 (200-275)||(18048889-18048964)
chr4 (282-357)||(28834164-28834238)
chr4 (200-273)||(43853448-43853521)
chr4 (169-225)||(32766492-32766548)
chr4 (248-356)||(36184599-36184706)
chr4 (126-234)||(27651872-27651980)
chr4 (126-234)||(36194637-36194745)
chr4 (28-99)||(50179615-50179686)
chr4 (124-296)||(21554783-21554957)
chr4 (200-234)||(22300855-22300889)
chr4 (163-225)||(35348279-35348341)
chr4 (200-234)||(47320460-47320494)
chr4 (169-234)||(4142821-4142886)
chr4 (325-358)||(9645437-9645470)
chr4 (200-312)||(43353512-43353629)
chr4 (164-225)||(56156717-56156778)
chr4 (169-225)||(22611161-22611217)
chr4 (201-296)||(52204340-52204433)
chr4 (169-225)||(53811006-53811062)
chr4 (169-225)||(56040721-56040777)
chr4 (169-225)||(2520755-2520813)
chr4 (200-275)||(21405532-21405607)
chr4 (175-222)||(29961002-29961049)
chr4 (42-120)||(3338816-3338894)
chr4 (200-234)||(9145955-9145989)
chr4 (169-219)||(11300072-11300122)
chr4 (304-357)||(19853445-19853497)
chr4 (284-357)||(21662541-21662613)
chr4 (284-357)||(21671305-21671377)
chr4 (169-222)||(26633749-26633802)
chr4 (202-275)||(36161719-36161792)
chr4 (252-296)||(1008319-1008363)
chr4 (164-272)||(2069611-2069718)
chr4 (169-225)||(21686317-21686372)
chr4 (281-357)||(33921155-33921230)
chr4 (169-225)||(44596642-44596698)
chr4 (169-209)||(47158205-47158245)
chr4 (116-171)||(49072858-49072914)
chr4 (200-276)||(51888238-51888314)
[»] chr2 (84 HSPs)
chr2 (36-360)||(2808383-2808707)
chr2 (28-360)||(32913078-32913410)
chr2 (5-360)||(6173445-6173802)
chr2 (28-360)||(45128041-45128374)
chr2 (28-360)||(9986253-9986592)
chr2 (4-348)||(30420489-30420836)
chr2 (4-360)||(36233817-36234178)
chr2 (56-361)||(3270139-3270445)
chr2 (5-360)||(21570319-21570676)
chr2 (28-360)||(27249062-27249396)
chr2 (71-360)||(7015622-7015912)
chr2 (4-311)||(34598799-34599108)
chr2 (28-360)||(4192675-4193007)
chr2 (28-360)||(20046993-20047326)
chr2 (107-360)||(8805782-8806036)
chr2 (14-349)||(40659854-40660187)
chr2 (28-360)||(8971539-8971873)
chr2 (32-360)||(25086874-25087207)
chr2 (63-360)||(3725052-3725350)
chr2 (107-350)||(26025331-26025575)
chr2 (134-361)||(3269021-3269251)
chr2 (134-361)||(3269580-3269810)
chr2 (116-360)||(22421660-22421898)
chr2 (107-360)||(41430943-41431198)
chr2 (38-360)||(459186-459509)
chr2 (28-360)||(27476991-27477318)
chr2 (68-360)||(27949300-27949596)
chr2 (71-360)||(4228011-4228293)
chr2 (5-360)||(17319139-17319490)
chr2 (28-233)||(40626066-40626272)
chr2 (27-212)||(32680640-32680827)
chr2 (56-360)||(39641770-39642076)
chr2 (5-215)||(41712821-41713033)
chr2 (56-360)||(8308037-8308339)
chr2 (174-297)||(31580563-31580686)
chr2 (116-360)||(37614037-37614279)
chr2 (42-297)||(9374530-9374780)
chr2 (107-352)||(32197715-32197960)
chr2 (208-360)||(32679021-32679173)
chr2 (224-360)||(84092-84227)
chr2 (258-352)||(40625976-40626070)
chr2 (281-360)||(33229051-33229130)
chr2 (107-183)||(31581808-31581885)
chr2 (275-360)||(38575396-38575481)
chr2 (107-320)||(38293461-38293679)
chr2 (274-360)||(41712700-41712785)
chr2 (56-167)||(42949578-42949691)
chr2 (200-357)||(44881657-44881813)
chr2 (172-234)||(12647990-12648052)
chr2 (211-357)||(18113890-18114035)
chr2 (4-132)||(33229129-33229257)
chr2 (121-255)||(10248077-10248211)
chr2 (164-225)||(18763431-18763492)
chr2 (308-360)||(34600332-34600384)
chr2 (169-225)||(39310928-39310984)
chr2 (123-316)||(36323790-36323981)
chr2 (169-278)||(4904171-4904277)
chr2 (126-234)||(10237290-10237398)
chr2 (162-357)||(13141457-13141651)
chr2 (162-225)||(36943197-36943260)
chr2 (169-225)||(1421644-1421700)
chr2 (169-225)||(7677949-7678005)
chr2 (200-276)||(32448647-32448722)
chr2 (152-287)||(11189620-11189755)
chr2 (116-147)||(18694972-18695003)
chr2 (202-357)||(18695066-18695220)
chr2 (281-356)||(19028849-19028923)
chr2 (200-275)||(29574657-29574732)
chr2 (32-87)||(31581888-31581943)
chr2 (200-234)||(6358943-6358977)
chr2 (172-276)||(6436579-6436679)
chr2 (171-225)||(7646443-7646497)
chr2 (260-290)||(17261606-17261636)
chr2 (175-233)||(34128755-34128813)
chr2 (200-234)||(37416706-37416740)
chr2 (201-276)||(4264472-4264544)
chr2 (169-276)||(35220293-35220397)
chr2 (169-222)||(37876685-37876738)
chr2 (172-225)||(43397195-43397248)
chr2 (169-225)||(5427944-5428000)
chr2 (169-225)||(7448215-7448271)
chr2 (202-234)||(14416169-14416201)
chr2 (200-272)||(37994275-37994347)
chr2 (169-225)||(38445134-38445190)
[»] chr3 (78 HSPs)
chr3 (4-360)||(25162242-25162599)
chr3 (12-360)||(29503275-29503624)
chr3 (4-360)||(4178370-4178728)
chr3 (5-360)||(46934449-46934805)
chr3 (28-360)||(49552135-49552468)
chr3 (28-360)||(39917309-39917641)
chr3 (28-360)||(25631437-25631772)
chr3 (4-360)||(32607273-32607632)
chr3 (28-360)||(36905951-36906285)
chr3 (4-360)||(44907310-44907667)
chr3 (4-360)||(12115899-12116261)
chr3 (4-360)||(51202165-51202518)
chr3 (4-360)||(38854947-38855305)
chr3 (71-357)||(50611332-50611619)
chr3 (63-360)||(14464372-14464673)
chr3 (68-360)||(17237672-17237968)
chr3 (55-360)||(35499109-35499420)
chr3 (56-356)||(38440496-38440794)
chr3 (116-360)||(42719438-42719680)
chr3 (68-360)||(22802891-22803193)
chr3 (132-360)||(30648630-30648860)
chr3 (4-234)||(4172372-4172604)
chr3 (171-359)||(3848831-3849019)
chr3 (4-352)||(25849627-25849964)
chr3 (69-360)||(46178447-46178731)
chr3 (162-360)||(36734604-36734801)
chr3 (120-358)||(31794001-31794231)
chr3 (38-233)||(2342332-2342528)
chr3 (32-320)||(37169067-37169353)
chr3 (28-360)||(21487940-21488256)
chr3 (172-360)||(6910623-6910802)
chr3 (258-360)||(2342524-2342626)
chr3 (68-167)||(3850560-3850660)
chr3 (278-360)||(21916555-21916636)
chr3 (27-226)||(47980708-47980914)
chr3 (27-226)||(47989995-47990201)
chr3 (27-226)||(47999282-47999488)
chr3 (27-226)||(48008569-48008775)
chr3 (169-280)||(20464993-20465101)
chr3 (200-275)||(4396362-4396437)
chr3 (116-218)||(30829892-30829995)
chr3 (198-315)||(20911614-20911731)
chr3 (169-225)||(43488665-43488721)
chr3 (126-235)||(51923634-51923743)
chr3 (173-276)||(4821766-4821868)
chr3 (201-272)||(46322356-46322427)
chr3 (116-220)||(54378818-54378923)
chr3 (108-169)||(6913249-6913311)
chr3 (200-234)||(7546595-7546629)
chr3 (200-234)||(12947343-12947377)
chr3 (172-234)||(29239300-29239362)
chr3 (200-234)||(51487091-51487125)
chr3 (169-225)||(9998424-9998480)
chr3 (169-225)||(10108193-10108249)
chr3 (169-225)||(10233027-10233083)
chr3 (169-225)||(12050723-12050779)
chr3 (200-289)||(24396492-24396585)
chr3 (169-225)||(36461506-36461562)
chr3 (169-225)||(40487282-40487338)
chr3 (200-235)||(8914693-8914728)
chr3 (200-234)||(16235407-16235441)
chr3 (200-234)||(27706299-27706333)
chr3 (169-223)||(38860197-38860251)
chr3 (171-225)||(40556671-40556725)
chr3 (200-234)||(42460731-42460765)
chr3 (94-147)||(3606656-3606709)
chr3 (200-357)||(30293419-30293575)
chr3 (169-222)||(31271885-31271938)
chr3 (184-225)||(36910716-36910757)
chr3 (184-225)||(52923192-52923233)
chr3 (169-225)||(6954771-6954827)
chr3 (169-225)||(10229433-10229489)
chr3 (203-235)||(21289886-21289918)
chr3 (281-321)||(26716075-26716115)
chr3 (200-276)||(35175389-35175465)
chr3 (169-225)||(44960027-44960083)
chr3 (169-225)||(45568520-45568576)
chr3 (169-225)||(47896109-47896165)
[»] chr6 (53 HSPs)
chr6 (8-360)||(23947228-23947582)
chr6 (4-360)||(25064043-25064402)
chr6 (5-360)||(12652749-12653110)
chr6 (28-360)||(17237197-17237529)
chr6 (4-360)||(16418967-16419324)
chr6 (56-360)||(33740489-33740795)
chr6 (56-360)||(7881013-7881320)
chr6 (28-360)||(8028029-8028363)
chr6 (34-360)||(4088297-4088626)
chr6 (28-360)||(8496797-8497133)
chr6 (31-360)||(12165676-12166005)
chr6 (74-360)||(4468437-4468724)
chr6 (32-360)||(4984478-4984818)
chr6 (34-360)||(10228518-10228845)
chr6 (5-353)||(8196325-8196675)
chr6 (56-360)||(7875955-7876262)
chr6 (116-360)||(35001510-35001756)
chr6 (191-360)||(33110608-33110777)
chr6 (42-360)||(33543535-33543851)
chr6 (107-360)||(28635024-28635288)
chr6 (32-271)||(34489084-34489327)
chr6 (28-264)||(17334608-17334848)
chr6 (11-187)||(33109649-33109826)
chr6 (125-360)||(25337499-25337731)
chr6 (159-237)||(7027799-7027877)
chr6 (278-360)||(7027947-7028029)
chr6 (125-296)||(4351971-4352148)
chr6 (271-360)||(16892727-16892816)
chr6 (144-357)||(1704065-1704277)
chr6 (130-276)||(26588499-26588648)
chr6 (287-360)||(17334846-17334919)
chr6 (312-360)||(20619585-20619633)
chr6 (200-272)||(22571461-22571533)
chr6 (312-357)||(12059687-12059732)
chr6 (200-272)||(31296807-31296879)
chr6 (172-280)||(31575530-31575638)
chr6 (172-234)||(30493491-30493553)
chr6 (107-147)||(8266546-8266586)
chr6 (169-225)||(23128577-23128633)
chr6 (169-225)||(32059868-32059924)
chr6 (169-225)||(32327292-32327348)
chr6 (169-225)||(33053243-33053299)
chr6 (116-178)||(13436707-13436770)
chr6 (200-235)||(14801810-14801845)
chr6 (200-235)||(30776655-30776690)
chr6 (90-167)||(5582757-5582835)
chr6 (200-234)||(8102709-8102743)
chr6 (201-234)||(546014-546047)
chr6 (162-235)||(28981126-28981199)
chr6 (169-218)||(34018519-34018568)
chr6 (169-225)||(68076-68132)
chr6 (169-225)||(606163-606219)
chr6 (169-225)||(7515277-7515333)
[»] chr5 (68 HSPs)
chr5 (8-360)||(27266770-27267125)
chr5 (28-360)||(21060194-21060526)
chr5 (4-360)||(34881521-34881885)
chr5 (68-360)||(781264-781556)
chr5 (4-360)||(19280856-19281213)
chr5 (28-360)||(18677376-18677711)
chr5 (11-360)||(7246776-7247127)
chr5 (41-359)||(16981138-16981457)
chr5 (4-357)||(7886852-7887206)
chr5 (7-360)||(19259723-19260074)
chr5 (5-360)||(41184351-41184712)
chr5 (107-360)||(2057749-2058004)
chr5 (11-360)||(7241600-7241952)
chr5 (28-360)||(7150246-7150580)
chr5 (116-360)||(30298131-30298375)
chr5 (4-360)||(42579688-42580056)
chr5 (4-360)||(43261730-43262086)
chr5 (41-360)||(35475249-35475568)
chr5 (28-360)||(26578084-26578420)
chr5 (35-360)||(28235427-28235753)
chr5 (28-360)||(3271313-3271651)
chr5 (5-326)||(36344436-36344757)
chr5 (4-296)||(30371535-30371830)
chr5 (70-360)||(43148607-43148895)
chr5 (4-360)||(27751725-27752093)
chr5 (107-360)||(42886393-42886646)
chr5 (164-357)||(10649619-10649809)
chr5 (68-360)||(20257607-20257899)
chr5 (107-296)||(27576325-27576515)
chr5 (107-360)||(15570823-15571075)
chr5 (205-360)||(4954005-4954160)
chr5 (116-287)||(7613042-7613213)
chr5 (32-242)||(11767645-11767859)
chr5 (116-352)||(42432823-42433058)
chr5 (57-167)||(10649317-10649428)
chr5 (63-179)||(6445806-6445923)
chr5 (260-360)||(11768070-11768167)
chr5 (75-290)||(19983336-19983556)
chr5 (270-356)||(6445951-6446036)
chr5 (107-335)||(42432019-42432243)
chr5 (230-352)||(22978843-22978964)
chr5 (107-235)||(1582159-1582287)
chr5 (107-235)||(1602528-1602656)
chr5 (299-360)||(30298951-30299012)
chr5 (169-225)||(6012213-6012269)
chr5 (68-320)||(28097028-28097278)
chr5 (68-217)||(11192242-11192392)
chr5 (118-214)||(1696923-1697021)
chr5 (124-225)||(14082448-14082556)
chr5 (126-234)||(14211134-14211242)
chr5 (200-357)||(19100552-19100708)
chr5 (200-234)||(28540979-28541013)
chr5 (169-218)||(24229866-24229915)
chr5 (169-225)||(9113800-9113856)
chr5 (169-225)||(13007186-13007242)
chr5 (169-225)||(38597754-38597810)
chr5 (324-360)||(41418633-41418669)
chr5 (200-275)||(10332576-10332651)
chr5 (169-220)||(14726541-14726592)
chr5 (200-234)||(19103540-19103574)
chr5 (200-234)||(19349682-19349716)
chr5 (200-234)||(39567283-39567317)
chr5 (200-229)||(2979384-2979413)
chr5 (281-357)||(6216978-6217053)
chr5 (169-221)||(13421890-13421942)
chr5 (169-225)||(25980115-25980171)
chr5 (169-225)||(26825387-26825443)
chr5 (281-357)||(35920929-35921004)
[»] chr1 (73 HSPs)
chr1 (4-360)||(51871677-51872033)
chr1 (69-356)||(28035016-28035305)
chr1 (5-360)||(45425977-45426331)
chr1 (28-360)||(51868556-51868890)
chr1 (12-360)||(14545340-14545687)
chr1 (4-360)||(7342534-7342892)
chr1 (28-360)||(25406195-25406529)
chr1 (30-360)||(40880924-40881256)
chr1 (28-360)||(5324469-5324802)
chr1 (28-360)||(35584529-35584866)
chr1 (4-360)||(5701069-5701429)
chr1 (11-360)||(9172307-9172660)
chr1 (11-360)||(9180289-9180642)
chr1 (30-360)||(11453773-11454105)
chr1 (5-360)||(33291329-33291687)
chr1 (30-360)||(30818262-30818588)
chr1 (4-360)||(50166010-50166367)
chr1 (56-360)||(50272051-50272357)
chr1 (116-360)||(34519057-34519298)
chr1 (4-360)||(19715806-19716165)
chr1 (34-360)||(38520446-38520773)
chr1 (32-358)||(18569224-18569551)
chr1 (68-360)||(7997663-7997959)
chr1 (67-360)||(27872614-27872907)
chr1 (56-360)||(30878939-30879245)
chr1 (107-360)||(9919304-9919559)
chr1 (28-360)||(50148208-50148540)
chr1 (68-358)||(20266178-20266470)
chr1 (107-360)||(39987305-39987558)
chr1 (108-360)||(3871325-3871578)
chr1 (131-359)||(31836745-31836975)
chr1 (107-360)||(9687116-9687382)
chr1 (34-239)||(19723176-19723382)
chr1 (42-360)||(7312017-7312329)
chr1 (4-360)||(40646500-40646844)
chr1 (67-360)||(48365677-48365957)
chr1 (28-360)||(45805739-45806055)
chr1 (32-360)||(41081615-41081946)
chr1 (68-296)||(44637298-44637527)
chr1 (122-360)||(39927466-39927705)
chr1 (180-360)||(33817079-33817271)
chr1 (64-167)||(25728064-25728168)
chr1 (181-360)||(33876549-33876740)
chr1 (107-191)||(30558736-30558820)
chr1 (281-360)||(32677041-32677120)
chr1 (281-360)||(19723404-19723483)
chr1 (200-276)||(12635159-12635235)
chr1 (200-309)||(16801310-16801419)
chr1 (169-225)||(5983797-5983853)
chr1 (145-225)||(7836871-7836951)
chr1 (200-276)||(47132892-47132968)
chr1 (200-276)||(49626903-49626978)
chr1 (200-234)||(16161823-16161857)
chr1 (200-234)||(34413163-34413197)
chr1 (169-225)||(11462523-11462579)
chr1 (162-234)||(19060861-19060933)
chr1 (329-360)||(11709618-11709649)
chr1 (162-225)||(21686827-21686890)
chr1 (163-234)||(32679164-32679235)
chr1 (126-234)||(48750096-48750204)
chr1 (169-219)||(7337744-7337794)
chr1 (201-275)||(31692495-31692568)
chr1 (4-50)||(31836678-31836724)
chr1 (169-219)||(45415519-45415569)
chr1 (200-277)||(799812-799889)
chr1 (200-233)||(9341716-9341749)
chr1 (161-234)||(41994377-41994450)
chr1 (126-222)||(51916739-51916836)
chr1 (169-225)||(1742242-1742298)
chr1 (200-276)||(24582940-24583015)
chr1 (328-360)||(27915015-27915047)
chr1 (258-338)||(31317797-31317876)
chr1 (200-276)||(44543262-44543337)
[»] chr8 (62 HSPs)
chr8 (4-360)||(11196707-11197056)
chr8 (5-360)||(44099847-44100200)
chr8 (14-360)||(11725507-11725853)
chr8 (32-360)||(35580300-35580629)
chr8 (28-360)||(42447938-42448273)
chr8 (4-360)||(9619268-9619627)
chr8 (4-360)||(19876032-19876383)
chr8 (56-360)||(4808831-4809137)
chr8 (37-360)||(34611652-34611977)
chr8 (28-353)||(33895921-33896248)
chr8 (56-360)||(2655736-2656043)
chr8 (28-360)||(43890035-43890370)
chr8 (28-360)||(9072556-9072891)
chr8 (28-360)||(14906834-14907169)
chr8 (3-360)||(32724392-32724760)
chr8 (116-360)||(43192258-43192502)
chr8 (11-360)||(9498510-9498863)
chr8 (4-360)||(29777044-29777392)
chr8 (68-360)||(11464051-11464344)
chr8 (27-360)||(28239670-28240014)
chr8 (32-360)||(44577879-44578203)
chr8 (28-360)||(17949086-17949408)
chr8 (32-359)||(33342280-33342606)
chr8 (120-360)||(37565790-37566032)
chr8 (32-360)||(27747026-27747353)
chr8 (81-360)||(16794185-16794464)
chr8 (32-358)||(15597081-15597408)
chr8 (120-360)||(33298787-33299027)
chr8 (125-360)||(39153054-39153293)
chr8 (208-360)||(23851405-23851557)
chr8 (32-360)||(15046735-15047065)
chr8 (249-360)||(43135490-43135600)
chr8 (120-234)||(36532829-36532944)
chr8 (174-276)||(5333391-5333493)
chr8 (162-233)||(8443579-8443650)
chr8 (205-275)||(15889574-15889644)
chr8 (107-228)||(18733939-18734061)
chr8 (109-276)||(17427211-17427382)
chr8 (169-225)||(7883314-7883370)
chr8 (169-225)||(23230603-23230659)
chr8 (213-357)||(35812688-35812830)
chr8 (169-225)||(37971243-37971299)
chr8 (162-225)||(20553314-20553377)
chr8 (162-276)||(1236722-1236835)
chr8 (162-276)||(1239422-1239535)
chr8 (109-170)||(17430970-17431032)
chr8 (200-274)||(29617301-29617375)
chr8 (68-183)||(12173381-12173495)
chr8 (68-183)||(12417809-12417923)
chr8 (200-276)||(15344297-15344372)
chr8 (200-276)||(15433362-15433437)
chr8 (200-276)||(15524666-15524741)
chr8 (202-234)||(39657440-39657472)
chr8 (200-234)||(18890770-18890804)
chr8 (200-234)||(41896501-41896535)
chr8 (114-166)||(12184210-12184263)
chr8 (114-166)||(12428638-12428691)
chr8 (108-168)||(25241706-25241767)
chr8 (169-221)||(3673401-3673453)
chr8 (200-228)||(14585690-14585718)
chr8 (162-234)||(20227347-20227419)
chr8 (200-272)||(24099284-24099356)
[»] scaffold0495 (1 HSPs)
scaffold0495 (34-360)||(5237-5564)
[»] scaffold0014 (1 HSPs)
scaffold0014 (110-360)||(201284-201534)
[»] scaffold0146 (1 HSPs)
scaffold0146 (68-360)||(16231-16527)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-360)||(361710-362057)
[»] scaffold0311 (2 HSPs)
scaffold0311 (32-206)||(8556-8731)
scaffold0311 (248-360)||(8745-8857)
[»] scaffold0426 (2 HSPs)
scaffold0426 (182-360)||(6293-6471)
scaffold0426 (4-147)||(6147-6289)
[»] scaffold0022 (1 HSPs)
scaffold0022 (162-356)||(83353-83544)
[»] scaffold0264 (1 HSPs)
scaffold0264 (41-265)||(20402-20624)
[»] scaffold0002 (1 HSPs)
scaffold0002 (116-292)||(453853-454030)
[»] scaffold0347 (1 HSPs)
scaffold0347 (200-272)||(6016-6088)
[»] scaffold0136 (1 HSPs)
scaffold0136 (208-357)||(34695-34843)
[»] scaffold0127 (1 HSPs)
scaffold0127 (169-225)||(15449-15505)
[»] scaffold0888 (1 HSPs)
scaffold0888 (126-234)||(1751-1859)
[»] scaffold0017 (1 HSPs)
scaffold0017 (169-225)||(32822-32878)
[»] scaffold0608 (1 HSPs)
scaffold0608 (28-99)||(74-145)
[»] scaffold0113 (1 HSPs)
scaffold0113 (200-319)||(36639-36758)
[»] scaffold0088 (1 HSPs)
scaffold0088 (304-357)||(50880-50932)
[»] scaffold0884 (1 HSPs)
scaffold0884 (169-225)||(2048-2104)
[»] scaffold0445 (1 HSPs)
scaffold0445 (169-225)||(1302-1358)
[»] scaffold0121 (1 HSPs)
scaffold0121 (281-357)||(31207-31282)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 3 - 360
Target Start/End: Complemental strand, 1449099 - 1448741
Alignment:
Q  3 acctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataac 102  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  1449099 acctctccaacaagccggccctagttttctctctctaggttttttcttccagattctttgttgaggggtggttttgggtcaattcttgacctgaaataac 1449000  T
Q  103 caaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  1448999 caaacttcatctctttctctctatttcaatctaaataagtgattttcacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttg 1448900  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||| |||||||||||||||||||||  ||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    |    
T  1448899 ttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatccattattcaatcaaagatttggatg 1448800  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||||||||||||||||  | |||||||||||| |||||||||||||||||||||||    
T  1448799 tcaacgttgcagatccggaccctatggatattccgatcactttaattttatcatatatt 1448741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 63 - 360
Target Start/End: Complemental strand, 35667441 - 35667143
Alignment:
Q  63 ttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctagg 161  Q
    |||| |||||||||||| |||||||||||||| |||| |||   |||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35667441 ttgaggggtggttttggatcaattcttgacttaaaatcacccttcttcatatttttctctctatttcaatctaaataagtgattttcacatagatctagg 35667342  T
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  35667341 ttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgat 35667242  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  35667241 tcatattgaaagatcgattattcaatcaacgatttgagcgtcaatgttgcagattcggaggccatggatattccggtcactttaattttatcatatatt 35667143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 22928138 - 22927781
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||||||||||    |||||||||||||||||| |||||| | |||||| ||   ||||||||||||||||||||||||| |||||| |||     
T  22928138 ctctccaacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattagggggtggttttgggtcaattcttgacctgaaatcaccc 22928039  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  22928038 cttttcatctttttctctctatttcaatctaaataagtgactttcacacagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgt 22927939  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||||||||||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   |||    
T  22927938 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgt 22927839  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  22927838 caacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatt 22927781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 26492173 - 26492531
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||  | ||| ||||||||| |||| |||| ||| |||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  26492173 cctctccaataagccggccctagttttatctctctagattttgtcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaataacc 26492272  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
       |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  26492273 cctcttcatctttttctctctatttcaatttaaataagtgattttcacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttg 26492372  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    |||| || |||||||||| |||||||||||||| |||| |||   || ||||||| |||||||||||||||| ||||||||||||||||||||||  |||    
T  26492373 ttgtccgccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattgaaaggtcgattattcaatcaaagatttgggcg 26492472  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  26492473 tcaacgttgcagatccggatgccttggatattccggtcactttaattttatcatatatt 26492531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 35496420 - 35496086
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||| |||||||| |||| | | |||||| |||| ||||||||||||||||||||||||| | |||| ||||| |||||||| ||||||||||||    
T  35496420 tttctctctttaggttttctcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctctctatt 35496321  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35496320 tcaatctaattaagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgtt 35496221  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    |||| |||| ||||  || | |||||||||| ||||| ||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||| ||||    
T  35496220 gtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggcca 35496121  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| ||||||||||||||| ||||||||||    
T  35496120 tggatatttcggtcactttaatttcatcatatatt 35496086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 42311088 - 42311446
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||| |||    |||||||||||||||||| ||||  || ||||||  ||| ||||||||||||||||||||||||| |||||| | |    
T  42311088 cctctccaacaagccgaccctaattttctctctctaggttttctcttagagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcatc 42311187  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgat-ttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
       |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  42311188 cctcttcatcattttctctctatttcaatctaaataagtgatattcacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttg 42311287  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    |||||||||||||| ||| ||||||||||||||||||| ||| | || ||||||| |||||||||||||||||||||||||||||||||||||||   ||    
T  42311288 ttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccg 42311387  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  42311388 tcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatt 42311446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 26583522 - 26583875
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | ||||||| ||||||||||||||| ||| |||||| |||| |||||||||| |||||||||||||| |||||| |||    
T  26583522 cctctccaacaagccggccctagttttctctttctaggttttttcttacagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatcacc 26583621  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctagg-ttttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
       |||||||| ||| ||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26583622 cctcttcatctttttatctctatttcaatctaaataagtgattttcatatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttg 26583721  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    |||||| |||||||||||||||||||||||||| | || ||| | |  ||||||| |||||||||||||||||||||||||||||||||||     ||||    
T  26583722 ttgttcatcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattgaaagatcgattattcaatcaaag-----agcg 26583816  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||    
T  26583817 tcaacgttgcagattcggaggtcatgaatattccggtcactttaattttatcatatatt 26583875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 46821822 - 46822181
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | |||||||||||||||||| ||||  |  || ||| |||| ||||||||||||||||||||||||| |||||| |||    
T  46821822 cctctccaacaagccggccctagttttctctctctaggttttctcttataattttttcattgaggggtggttttgggtcaattcttgacctgaaatcacc 46821921  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||  |||||||| |||||||||||||||| ||||| |||    
T  46821922 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttctttgtaatttcatcatctaagtatggtgattt 46822021  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||| ||||||||||| |||||||||||||||  ||    
T  46822022 gttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttgggc 46822121  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||||||| || ||| |||||||| |||||||||||| ||||||||||    
T  46822122 gtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatt 46822181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 6 - 360
Target Start/End: Original strand, 20116393 - 20116748
Alignment:
Q  6 tctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaa 105  Q
    ||||||||||| ||||||  | |||||||||||| ||||| ||||| || ||||||  ||| |||| |||||||||||||| ||||| |||||| |||      
T  20116393 tctccaacaagtcggccctagttttctctctctatgttttctcttcaagtttcttcaatgaggggtagttttgggtcaatttttgacctgaaatcaccct 20116492  T
Q  106 acttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
     |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||| ||||||||    
T  20116493 tcttcatctttttctatctatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatatacatgtggttgtttgttg 20116592  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    |||||||||||||||| ||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||  |||| |    
T  20116593 ttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaactttgggcgtca 20116692  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| || || | ||| ||||||||||||||||||||||||||| |||||    
T  20116693 acgttgcagacccagaggtcatagatattccggtcactttaattttatcaaatatt 20116748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 23085330 - 23085687
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||| |||    |||||||||||||||||| |||||| | |||||| |||  ||||||||||||||||||| |||||||||||| |||    
T  23085330 cctctccaacaagccgaccctaattttctctctctaggttttctcttcc-gtttcttcattgg-gggtggttttgggtcaattattgacttgaaatcacc 23085427  T
Q  104 aaa-cttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
        |||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  23085428 ccctcttcatctttttctttctatttcaatctaaataattgactttcacatagatctaggtttttttctttgtgattttatcatctaagtgtggtggttt 23085527  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    ||||||||||||| |||||||| ||||||| ||| |||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| | |    
T  23085528 gttgttcgtcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaagatcgattattcaatcaaagatttgaac 23085627  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||| |||  |||||||||||||||| |||||||||||||||||||||    
T  23085628 gtcaacgttgcagatctggagaccatggatattccggtgactttaattttatcatatatt 23085687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 21266200 - 21266556
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||  | ||||||||| || |||||||||||||| |||||  |||| ||||||||||||||||||| ||||| |||||| |||    
T  21266200 cctctccaataagccggccctagttttctctctttaagttttttcttccagtttctttattgaggggtggttttgggtcaattattgacatgaaatcacc 21266299  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  21266300 tctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagg-gttttctttttgatttcatcatctaagtgtggtggtttgt 21266398  T
Q  203 tgttcgtcgtcttgtgcggc-gttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    | |||||||||||||||| |  || ||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||     
T  21266399 tattcgtcgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattg-aagatcgattattcaatcaaagatttgagca 21266497  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||| |||||| ||||| |||| |||||| ||||||||||||||    
T  21266498 tcaacgttgcagatccggaggccatgaatatttcggtgactttagttttatcatatatt 21266556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 45199276 - 45198944
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||| ||||| ||||| ||||| | | || | |||||||||||| |||| | ||||| |||||| ||| | |||||||| ||||||| ||||    
T  45199276 tttctctctctaagttttctcttctagattttccattcaggggtggttttggatcaactattgacctgaaatcacccatcttcatctttttctctatatt 45199177  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    | ||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  45199176 ttaatttaaataagtgattttcatatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgctg 45199077  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  45199076 tttgatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcggttattcaatcaaagatttgggcgtcaacgttgcagatccggaggccat 45198978  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||| |||||||||||||||    
T  45198977 ggatattccggtcactttgattttatcatatatt 45198944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 48207736 - 48208066
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||| |||||||| ||||| ||||| ||| | || |||||||||||||||| |||||||| |||||| |||   |||||||| ||||||  ||||    
T  48207736 tttctctctttaggttttctcttctagatttttcatcga-gggtggttttgggtca-ttcttgacctgaaatcacccctcttcatctttttctcaatatt 48207833  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  48207834 tcaatctaaataagtgattttcacatagatctatgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgctg 48207933  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| ||||| |||||||||| |||||||| ||| |||||| ||||| |||||||||||||  |||| ||||||||||||||||| |||||    
T  48207934 tttgatttcccgtcttcttgcggtgttcatttgattcattttg-aagatccattatacaatcaaagatttgggcgtcaacgttgcagatccggaggccat 48208032  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||    
T  48208033 ggatattccggtcactttaattttatcatatatt 48208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 41 - 360
Target Start/End: Complemental strand, 42067292 - 42066973
Alignment:
Q  41 gttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataa 140  Q
    ||||| ||||| ||||| | | |||| ||||| ||||||||||||||||||| |||||| |||   ||||||||  || ||| |||||||||||||||||    
T  42067292 gttttctcttctagattttccattgaagggtgattttgggtcaattcttgacctgaaatcacctctcttcatcttgttatctatatttcaatctaaataa 42067193  T
Q  141 gtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgt 239  Q
    ||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||    
T  42067192 gtgattttcacatagatatagattttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgt 42067093  T
Q  240 attcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtc 339  Q
     ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||    
T  42067092 cttcttgcggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtc 42066994  T
Q  340 actttaattttatcatatatt 360  Q
    |||||||||||||||||||||    
T  42066993 actttaattttatcatatatt 42066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 32 - 350
Target Start/End: Complemental strand, 1485497 - 1485178
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||||| | |||||| |||  |||||||||||||| |||||||||| | |||| |||   |||||||| ||||||||||||||||    
T  1485497 tctctctaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctaaaatcacccgtcttcatctttttctctctatttcaa 1485398  T
Q  132 tctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1485397 tctaaataagtgactttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttg 1485298  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
     ||| || | ||||| |||| ||||| | ||||  ||||||| |||||||||||||||||||||||   ||| ||| ||||||||||||| |||||||||    
T  1485297 ttttcccatcttcttgcggtattcattttattccaattgaaaaatcgattattcaatcaaagatttggacgtcaacattgcagatccggaggccatggat 1485198  T
Q  331 attccggtcactttaatttt 350  Q
    |||||||| |||||||||||    
T  1485197 attccggtgactttaatttt 1485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 71 - 359
Target Start/End: Original strand, 42408237 - 42408527
Alignment:
Q  71 tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-ttc 168  Q
    ||||||| ||||| |||||||| |||||| | | | |||||||| ||||||| ||||||||||||||||| || ||| ||||| |||||||||||| |||    
T  42408237 tggtttttggtcagttcttgacctgaaatcatccatcttcatctttttctctttatttcaatctaaataattgtttttcacatggatctaggtttttttc 42408336  T
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||| ||||| |||||||||||    
T  42408337 tttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatatt 42408436  T
Q  269 gaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatat 359  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  42408437 gaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattccgatcactttaattttatcatatat 42408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 26 - 360
Target Start/End: Original strand, 46338883 - 46339220
Alignment:
Q  26 gatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctcta 125  Q
    ||||||||||||   ||||| |||| ||  |||||| |||| |||| |||||||||||||||||||| |||||| | |   |||||||| ||||||| ||    
T  46338883 gatttctctctccgagttttctcttacaatttcttcattgaggggtagttttgggtcaattcttgacctgaaattatccctcttcatctttttctcttta 46338982  T
Q  126 tttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    ||||||| |||||||||||||| ||||||||||||| ||||  |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  46338983 tttcaatgtaaataagtgattttcacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggc 46339082  T
Q  223 gttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaag 322  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||||  |||| |||||||||||| || | |    
T  46339083 gttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgggcgtcaacgttgcagattcgaagg 46339182  T
Q  323 ccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||||||||||| ||||||||||    
T  46339183 caatggatattccggtcactttaatttcatcatatatt 46339220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 68 - 360
Target Start/End: Complemental strand, 23425576 - 23425284
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgatttc-acatagatctaggttttt 166  Q
    ||||||||||||||||||||||||| |||||| |||   |||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  23425576 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtgatttttacatagatctaggttttt 23425477  T
Q  167 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata 266  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||| |||||||||||||||| ||     
T  23425476 tctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcatctgatttatt 23425377  T
Q  267 ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||||||||| || |||||||||  || | || |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||    
T  23425376 ttg-aagatcgattattaaaacaaagatttgggcatcaatgttgcagatccggaggccatggatattctagtcactttacttttatcatatatt 23425284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 433935 - 433602
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||| |||||||||||| |||||  | |||||| |||  ||||||||||||||||||| ||||| |||||| | |    ||||||| ||||||||||||    
T  433935 tttctttctctaggttttctcttctggtttcttcattg--gggtggttttgggtcaatttttgacctgaaatcatcccttttcatctttttctctctatt 433838  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtgg-tggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    ||||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  433837 tcaatctaaataaatgactttcacatagatctagatttttttctttgtgatttcatcatctaagtgtgggtggtttgttgttcgttgtcttgtgcagcgt 433738  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||| |||  ||| ||||||| |||||||| | |||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||    
T  433737 tgtttgctttctcgtcttcttacagtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgttaacgttgcagatccggaggcc 433638  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||| |||||||||| |||||||||||||||||||||    
T  433637 atgaatattccggtgactttaattttatcatatatt 433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 2843496 - 2843152
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||| ||  | |||||||||||||||||| |||| ||  |||||| |||| ||||||||||||||||||||||||| |||||  |||    
T  2843496 cctctccaacaaggcggtcctagttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaaacacc 2843397  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  2843396 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttt-tttgtaatttcatcatctaagtgtggtgatttgt 2843298  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||            ||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  2843297 tgttcgt------------cgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgt 2843210  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     || |||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  2843209 caatgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 2843152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 14628125 - 14627790
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctctttctctctat 126  Q
    |||| ||||||| |||||||||| |||  ||||| |||| ||||||||||||||||| | || ||  ||||| |||    |||||||| ||| ||||||     
T  14628125 tttcgctctctaagttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttaccggaaattacctcctcttcatctttttttctctaa 14628026  T
Q  127 ttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    ||||||||||||||||||||| |||||| || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14628025 ttcaatctaaataagtgattttcacataaatataggtttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgt 14627926  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    ||||||||||  ||| ||  ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||    
T  14627925 tgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagattcggaggcc 14627826  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  14627825 atgaatattccagtcactttaattttatcatatatt 14627790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 127 - 360
Target Start/End: Original strand, 23786508 - 23786741
Alignment:
Q  127 ttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||||||| |||| | |||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23786508 ttcaatctaaataagtgattttcacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgtt 23786606  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    |||||||||  ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||| || | ||    
T  23786607 gtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttaaacgtcaacgttccagatcccgaggtca 23786706  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  23786707 tggatattcctgtcactttaattttatcatatatt 23786741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 27 - 360
Target Start/End: Complemental strand, 31236039 - 31235695
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgg-gtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctcta 125  Q
    |||| ||||||||| |||| |||||||  |||||| |||| || ||| ||||||||||||| ||||| ||||||  ||   |||||||| ||||||||||    
T  31236039 atttttctctctagattttctcttccattttcttcattgagggagtgattttgggtcaatttttgacatgaaatctcccctcttcatctttttctctcta 31235940  T
Q  126 tttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||  |||||||| |||||||||||||| |||||||||||||||||||||||| |||    
T  31235939 tttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcg 31235840  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc------ 317  Q
    |||||||||||  |||||  || |||||||||| ||||||||||||||||||| ||||||||||||||  ||| ||||| ||||||||| ||||          
T  31235839 ttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaatctttgagcgtcaacgttgcaaatccggaggc 31235740  T
Q  318 --ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
      ||||| ||||| ||||||| |||||||||||||||||| ||||    
T  31235739 atggaagacatgggtattccgatcactttaattttatcatgtatt 31235695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 137 - 360
Target Start/End: Original strand, 6558817 - 6559043
Alignment:
Q  137 ataagtgattt-cacatagatctaggttttt--tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    ||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  6558817 ataagtgattttcacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgatt 6558916  T
Q  234 ttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatatt 333  Q
    | |||| ||| | |||||||||| |||||||| |||||| |||||||||||||||||||||||  |||| ||||||||||||||||| |||||| |||||    
T  6558917 tcccgtcttcgtgcggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatatt 6559016  T
Q  334 ccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||||||||||||    
T  6559017 ccggtcactttaattttatcatatatt 6559043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 32684491 - 32684834
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctct--aggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataa 101  Q
    ||||||||||||||||||||  | | |||||||||  ||||||| |||| | | |||||| |||| ||||||||||||||||||||||||| |||||| |    
T  32684491 cctctccaacaagccggccctagctctctctctctctaggttttctcttacggtttcttcattgaggggtggttttgggtcaattcttgacctgaaatca 32684590  T
Q  102 ccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt---tctttgtgatttcatcatctaagtgtggtgg 197  Q
    |    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||                       
T  32684591 catgtcttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttctttctttgtgattt------------------- 32684671  T
Q  198 tttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttt 297  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||  | |||||||||| ||||||||||||||| |||||||||||||||||||||||     
T  32684672 tttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttg 32684771  T
Q  298 agcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     |||| |||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  32684772 ggcgtcaacgttacagatctggaggccatggatattccggtcactttagttttatcatatatt 32684834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 135 - 360
Target Start/End: Complemental strand, 17223136 - 17222911
Alignment:
Q  135 aaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  17223136 aaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgatt 17223037  T
Q  234 ttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatatt 333  Q
    |||| | ||| | | |||||||| |||||||||||||||||||||||||||||||||||||||    || ||||||||||||  | | ||||||||||||    
T  17223036 ttccttcttcatgc-gtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagatttgaaggccatggatatt 17222938  T
Q  334 ccggtcactttaattttatcatatatt 360  Q
    | |||||||||||||||||||||||||    
T  17222937 ctggtcactttaattttatcatatatt 17222911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 27 - 360
Target Start/End: Original strand, 6001851 - 6002195
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctcta 125  Q
    |||| ||||| |||||||| |||||||  |||||  |||| ||| || |||||| |||||| ||||| |||||| ||| | |||||||| |||||| |||    
T  6001851 atttttctctttaggttttctcttccattttctttattgaaggggtgattttggatcaatttttgacctgaaatcacccatcttcatctttttctcccta 6001950  T
Q  126 tttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    ||| ||||||||||||||||||  ||||||||| |||||||| |||  |||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  6001951 ttttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcg 6002050  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc------ 317  Q
    |||||||||||  |||||  |  |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||          
T  6002051 ttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccgaaggt 6002150  T
Q  318 --ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
      ||||| ||||  |||||||||||| ||||||||||||| ||||    
T  6002151 atggaagacatgagtattccggtcaccttaattttatcatgtatt 6002195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 162 - 360
Target Start/End: Original strand, 34773679 - 34773877
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    |||||||||||| |||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| | || ||||| |||||||||| ||||    
T  34773679 ttttttctttgtaatttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgat 34773778  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||  |||||||||||||||  |||| ||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||    
T  34773779 tcatattgaaagatcgatcgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatt 34773877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 33 - 360
Target Start/End: Complemental strand, 32522170 - 32521840
Alignment:
Q  33 ctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctt-----tctctctatt 127  Q
    ||||||||||||| |||||||  |||||| |||| || ||||||| |||| | | ||||| |||||| ||| | |||||||| ||     ||||||||||    
T  32522170 ctctctaggttttctcttccaacttcttcattgagggatggttttaggtcgaat-ttgacctgaaatcacccatcttcatcttttttttctctctctatt 32522072  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||| ||||||||||| |||||||||||| || |||||||||| || |||||  ||||| |||||||| || ||||||||||| |||||||||||||||    
T  32522071 tcaatttaaataagtgattttcacatagatttatgttttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttg 32521972  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    ||||||||||||| || ||  ||||||||| ||||||||||||||||||| |||||||||||||||||||  || | || ||||| | |||||  | |||    
T  32521971 tttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttaggcatcaatgttgctgttccgg--ggcat 32521874  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    |  |||||| | |||||| |||||||||||||||    
T  32521873 gagtattccagacacttttattttatcatatatt 32521840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 35261157 - 35261463
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctc-tctatttcaatctaaataagtgattt-cacata 153  Q
    |||||||||||  ||| |||||||| ||||| ||||| | |||| ||| | |||||||| |||||  || ||||||||| ||||||||||||| ||||||    
T  35261157 ttcttcgttgaatggtagttttgggccaatttttgacctaaaatcacccatcttcatctttttctagtccatttcaatccaaataagtgattttcacata 35261256  T
Q  154 gatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtg 251  Q
     || ||| ||||||  ||| |||||||| ||||| ||||||||| || |||||||||||||||  ||| || || ||||||||||||| ||  | || ||    
T  35261257 aatttagattttttttcttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtctcctgcagcattatttgattttccgtctttgtgcg-tg 35261355  T
Q  252 ttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaatttta 351  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||   ||| || ||||||||||||| || ||||  ||||||||||||||||||||||    
T  35261356 ttcatttgattcatattaaaagatcgattattcaatcaaagatttagacgtcaatgttgcagatccgg-aggcatgtgtattccggtcactttaatttta 35261454  T
Q  352 tcatatatt 360  Q
    |||||||||    
T  35261455 tcatatatt 35261463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 203 - 360
Target Start/End: Original strand, 19560007 - 19560164
Alignment:
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||||||||||||||||||||  | | |||||   |||||||| |||||||||||||||||| ||||||||||||||||||||   |||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgt 19560106  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  19560107 caaccttgcagatccggagaccatgaatattccggtcactttaattttatcatatatt 19560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 145 - 302
Target Start/End: Original strand, 17611076 - 17611233
Alignment:
Q  145 tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattct 244  Q
    ||||||||| | |||| ||||||||| |||||||| |||||  ||||||||||| |||| ||||||||||||||||| |||||||||||||| || || |    
T  17611076 tttcacataaaactagattttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgt 17611175  T
Q  245 tacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    | | |||||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  17611176 tgcagtgttcatttgattcatattgaaagattgattattcaatcaaagatttgagcgt 17611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 162 - 360
Target Start/End: Complemental strand, 7640881 - 7640686
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||| || | ||||| ||    |||| | ||    
T  7640881 ttttttttttgtgatttcatcatctaagtgtggtggtttgttgctcgtcgccttgtgaggcgttgtttgctttcccatcttcttgcg----tcattttat 7640786  T
Q  262 tcata-ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| | ||||||||||||||||||||||||| ||||  |||| ||| ||||| ||| ||| | ||||||||||| |||||||||||||| ||||||||||    
T  7640785 tcacatttgaaagatcgattattcaatcaaatatttgggcgtcaacattgcaaatctggatgtcatggatattctggtcactttaatttcatcatatatt 7640686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 128 - 360
Target Start/End: Complemental strand, 46818561 - 46818330
Alignment:
Q  128 tcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||||||  |||||| || | |||||||||||  ||||||| |||||  ||||||| |||  ||||||||   ||||||||||||||    
T  46818561 tcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatccgagtgtggcggtgcgttgttcgaaatcttgtgcggcgtt 46818462  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    |||||||||  |||||| || |||||||||| | ||||||||| ||||||||||| |||| |||||||  || |||  |||||||||||||| | || ||    
T  46818461 gtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatcgattgttcagtcaaaga-attggcg-caacgttgcagatccag-agtca 46818365  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    ||  ||||||| |||||||||||||||||||||||    
T  46818364 tgtgtattccgttcactttaattttatcatatatt 46818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 20083204 - 20083504
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt---cacatagatctaggttt 164  Q
    |||||||||| ||| |||| ||||| | ||||| |||  |||||||| ||||| ||||||||||||||||||||  ||||   || ||| ||||||||||    
T  20083204 gggtggttttaggttaatttttgacctaaaata-ccactcttcatctttttctttctatttcaatctaaataagcaattttcacatatatatctaggttt 20083302  T
Q  165 ttt-ctttgtgatttcatcatctaagtgtggtggtttgttg-----ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatct 258  Q
    ||| |||  |||||||  |||||||||||| |||| |||||     || ||||||||||| | ||||||||||||| |||| || || |||||||||  |    
T  20083303 ttttcttcatgatttcgacatctaagtgtgatggtgtgttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcagtt 20083402  T
Q  259 gattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatg-ga-tattccggtcactttaattttatcata 356  Q
    | || || |||||||||||||| |||||||||||||||  |||| ||||||||| |||||| || |||| || |||||||||||||||| ||||||||||    
T  20083403 gttttattttgaaagatcgatt-ttcaatcaaagatttgggcgtcaacgttgcatatccgg-agacatgtgagtattccggtcactttagttttatcata 20083500  T
Q  357 tatt 360  Q
    ||||    
T  20083501 tatt 20083504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 17499799 - 17499666
Alignment:
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||| | ||||||  ||||||||||| | |||||||    
T  17499799 tctaaataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttg 17499700  T
Q  231 attttccgtattcttacggtgttcatctgattca 264  Q
    ||||||||| || || |||| ||||| |||||||    
T  17499699 attttccgtcttgttgcggtattcatttgattca 17499666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 264
Target Start/End: Original strand, 17553415 - 17553548
Alignment:
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||| | ||||||  ||||||||||| | |||||||    
T  17553415 tctaaataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttg 17553514  T
Q  231 attttccgtattcttacggtgttcatctgattca 264  Q
    ||||||||| || || |||| ||||| |||||||    
T  17553515 attttccgtcttgttgcggtattcatttgattca 17553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 13592515 - 13592420
Alignment:
Q  264 atattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  13592515 atattggaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatccggatg-catgggtattctggtcactttaattttatcatatatt 13592420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 36143711 - 36143875
Alignment:
Q  41 gttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataa 140  Q
    |||||||||| | | || ||| |||| |||| ||||||| |||| | || || |||||| | | | |||||||| |||||||||| ||||||||||||||    
T  36143711 gttttttctttccgttttttcattgaggggttgttttggatcaaattttaacgtgaaattatccatcttcatctttttctctctaattcaatctaaataa 36143810  T
Q  141 gtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    ||| ||| ||| ||||||||||||||||||| |||||||| || ||| ||||||||||| |||||    
T  36143811 gtgtttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgttg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 12539224 - 12539129
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaat 99  Q
    |||||||||||||||| |||  | ||||||||||||| |||| |||||||| |||||| |||| |||||||||| |||||||||||||| ||||||    
T  12539224 cctctccaacaagccgaccctagttttctctctctagattttctcttccagtttcttcattgaggggtggtttttggtcaattcttgacctgaaat 12539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 3860828 - 3860991
Alignment:
Q  72 ggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctt 170  Q
    ||||||| ||||||| || ||||||||| ||    ||| |||| ||||||| | ||||||| ||||||||||| |||||||||||||| || ||||||||    
T  3860828 ggttttgtgtcaatttttaacttgaaatcacatctctttatctttttctctttgtttcaatataaataagtgattttcacatagatcttgg-tttttctt 3860926  T
Q  171 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
     ||||||||||| | |||||| |  | | |||| || || |||||||||||||||| ||||||||    
T  3860927 cgtgatttcatcgtttaagtgcgacgctgtgttatttgttgtcttgtgcggcgttgattgatttt 3860991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 24069525 - 24069425
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaa 271  Q
    ||||||||||| ||| |||| || | | |||||||||| ||||||||||||||| ||||||||  |||||| || |||||||| | ||||||||||||||    
T  24069525 gtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaa 24069426  T
Q  272 a 272  Q
    |    
T  24069425 a 24069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 969588 - 969478
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    ||||||||| ||||||||||| | | | ||||| | | |||||||||||||||| ||||||||||||||||||| ||| || || |||||||  | || |    
T  969588 ttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggt 969489  T
Q  262 tcatattgaaa 272  Q
    |||||||||||    
T  969488 tcatattgaaa 969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 37837589 - 37837533
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||||||||| || | | ||||||||||||||||||||||||||    
T  37837589 tttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 37837533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 1749328 - 1749220
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || ||| |||| |  | | |||||||||||||||||||||||     
T  1749328 tttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggca 1749231  T
Q  224 ttgtttgattt 234  Q
    |||||||||||    
T  1749230 ttgtttgattt 1749220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 3394426 - 3394496
Alignment:
Q  164 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||| ||||||||||| ||| |||| |||| | ||||||||||||||||||| || ||||||||||||    
T  3394426 ttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgattt 3394496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 24770161 - 24770262
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||| ||| |||||| ||| |  |||||||||| |||||||| || |||||||| |||| | |||||||||||||||| |||| ||    
T  24770161 tttcaatctaaataagtggttttcacatatatcaaatttttttcttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacg 24770260  T
Q  224 tt 225  Q
    ||    
T  24770261 tt 24770262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 46244292 - 46244185
Alignment:
Q  248 ggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaat 347  Q
    ||||||||| || ||| |||||||| |||| ||||||| |||| ||||| ||||| |||||||||| | || ||| ||| ||||||  ||||||||||||    
T  46244292 ggtgttcatttggttcctattgaaaaatcggttattca-tcaatgatttgagcgtcaacgttgcaggttcg-aagacattgatattttggtcactttaat 46244195  T
Q  348 tttatcatat 357  Q
    ||||||||||    
T  46244194 tttatcatat 46244185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 1100931 - 1100804
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| ||||||||||||||||| | || |||||| |||  |||| ||||| |||||||||| ||||||||||| | | | |  || | | ||||||    
T  1100931 cttcatctttttctctctatttcaattttaacaagtgatttttgcatatatcta-gttttttcttcgtgatttcatcgtatgaatccggcgatatgttgt 1100833  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattt 234  Q
    || ||||||||||||| ||||||||||||    
T  1100832 tcatcgtcttgtgcggtgttgtttgattt 1100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 8001677 - 8001621
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||||||||    
T  8001677 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 8001621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 9450268 - 9450212
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||||| | | ||||||||||||||||||||||||||    
T  9450268 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 9450212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 7740568 - 7740635
Alignment:
Q  124 tatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagt 190  Q
    ||||||||| ||||||| | |||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  7740568 tatttcaatttaaataaattattttcacatagatttagattttttctttgtgatttcataatctaagt 7740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 35132861 - 35132965
Alignment:
Q  130 aatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgt 227  Q
    |||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || ||| |||| |  | | |||||||||||||||||| |||||||||    
T  35132861 aatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgt 35132958  T
Q  228 ttgattt 234  Q
    |||||||    
T  35132959 ttgattt 35132965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 272
Target Start/End: Original strand, 5546279 - 5546437
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatct-aggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 213  Q
    ||||||||||||||||||||||||||||| ||||||||| || | || ||||||||| || ||||| || ||| | ||| |   | |||| ||| |||||    
T  5546279 tttctctctatttcaatctaaataagtgattttcacataaatttaagtttttttcttcgtcatttcgtcgtctcaatgttgcattgtgttattcatcgtc 5546378  T
Q  214 ttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||| |  | |||||||||||| |||| || ||||||| || || ||| ||||||||    
T  5546379 ttgtgcagtatcgtttgattttccatattgttgcggtgttaatttggttcttattgaaa 5546437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 22742928 - 22742962
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  22742928 tgttgttcgtcgtcttgtgcggcgttgtttgattt 22742962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 24350944 - 24350910
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  24350944 tgttgttcgtcgtcttgtgcggcgttgtttgattt 24350910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 28476211 - 28476245
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  28476211 tgttgttcgtcgtcttgtgcggcgttgtttgattt 28476245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 1575242 - 1575113
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatt-tcacatagatctaggt-tttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| ||||||  ||||||||| || |||||| ||| || ||||||||||  | |||||||||||||||||||| ||||| ||||| | | | |||    
T  1575242 cttcatctttttctccttatttcaatttacataagttattgtcgcatagatctaattatttttctttgtgatttcatcgtctaaatgtggcgatatattg 1575143  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||| |  | ||||||| |||||||||||||    
T  1575142 ttcattattttgtgcgacgttgtttgattt 1575113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 357
Target Start/End: Complemental strand, 43369791 - 43369687
Alignment:
Q  252 ttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaatttta 351  Q
    ||||| || ||| |||||||||||||  ||||||||||| | ||||  | | ||||||||||||||||| | ||||  |||||  |||||||||||||||    
T  43369791 ttcatttggttcctattgaaagatcggctattcaatcaatggttttgtcatcaacgttgcagatccggatg-catgagtattctagtcactttaatttta 43369693  T
Q  352 tcatat 357  Q
    ||||||    
T  43369692 tcatat 43369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 19296830 - 19296886
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  19296830 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 19296886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 30756950 - 30756894
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  30756950 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 30756894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 34899738 - 34899682
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  34899738 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 34899682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 39171721 - 39171665
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| |||||||||||  | | |||||||||||||||||||||| |||||    
T  39171721 tttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtcttgtgcagcgtt 39171665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 41553537 - 41553461
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||| | |||| ||||||||  ||| || ||| ||||||| | || ||||||||||||||||    
T  41553537 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 41553882 - 41553806
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||| | |||| ||||||||  ||| || ||| ||||||| | || ||||||||||||||||    
T  41553882 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatc 41553806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 42978570 - 42978626
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  42978570 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 42978626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 3267327 - 3267237
Alignment:
Q  185 ctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcga 278  Q
    ||||||| || | ||||||||||||||||||||||| |   |||||||||  ||| || | ||||||||| | | |||||||||||||||||||    
T  3267327 ctaagtgcggcgttttgttgttcgtcgtcttgtgcgac---gtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcga 3267237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 48930686 - 48930791
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||||| |||||| ||| || ||||||| |   |||||| || ||| |||| |  | | |||| ||||||||||||||||||||    
T  48930686 tttcaatctaaataagtgattttcacatacatcaag-ttttttcat---gatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgt 48930781  T
Q  225 tgtttgattt 234  Q
    ||||||||||    
T  48930782 tgtttgattt 48930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 43369908 - 43369858
Alignment:
Q  130 aatctaaataagtgattt-cacatagatctaggttttttctttgtgatttc 179  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  43369908 aatctaaataagtgattttcacatagatataagttttttcttcgtgatttc 43369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 7640928 - 7640887
Alignment:
Q  127 ttcaatctaaataagtga-tttcacatagatctaggtttttt 167  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  7640928 ttcaatctaaataagtgattttcacatagatataggtttttt 7640887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 12141439 - 12141386
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    ||||||||||| || |||||||| || | ||||||||| |||||||||||||||    
T  12141439 tttgtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggc 12141386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 286734 - 286682
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt 167  Q
    ||||| |||| || |||||||||||||||||| |||||| |||||||||||||    
T  286734 tttctatctaatttaatctaaataagtgatttccacatatatctaggtttttt 286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 26623921 - 26623865
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||| ||| |||| || | | |||||||||||||||||| |||||||    
T  26623921 tttgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtt 26623865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 39328921 - 39328865
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||  || | | ||||||||||||||||||||||||||    
T  39328921 tttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt 39328865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 41554227 - 41554155
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    ||||||||||||||||||| | |||| ||||||||  ||| || ||| ||||||| | || ||||||||||||    
T  41554227 tgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaa 41554155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 44311932 - 44311860
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||| ||||||||||| ||| |||| |  | | | |||||||||||||| |||| |||||||||||||    
T  44311932 ttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 44311860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 45349938 - 45349874
Alignment:
Q  161 gttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||| | ||||||||| || ||||||||||| | | ||||||||||||| ||||| ||||||    
T  45349938 gttttttttctgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtt 45349874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 46700118 - 46700193
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||| |||||  || | | ||||||||||||||||| |||||||||| |||| ||||  ||||||||||||    
T  46700118 attcaatcaatgatttgggcatcagcgttgcagatccggaag-catggatatttcggtgacttagattttatcatat 46700193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 47590271 - 47590327
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| |  |||||||| || | | ||||||||||||||||||||||||||    
T  47590271 tttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 47590327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 10390022 - 10389665
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | ||||||| |||||||||| ||||  || |||||| |||| ||||||||||||||||||||||||| |||||| ||     
T  10390022 cctctccaacaagccggccctagttttctctttctaggttttctcttatagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcact 10389923  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  10389922 catcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttttccttttgatttcatcatctaagtgtggtggtttgt 10389823  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  10389822 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaatatcgattattcaatcaacgatttgagcgt 10389723  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10389722 caacgttgcagatccggaggccatggatattccgatcactttaattttatcatatatt 10389665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 25273695 - 25274061
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | ||||||||||||| |||| |||| ||| |||| | |||| |||||||||||| |||||||||||| |||||| |||    
T  25273695 cctctccaacaagccggccctagttttctctctctagattttctcttacagtttctccattgaggggtggttttggatcaattcttgacctgaaatcacc 25273794  T
Q  104 aaacttcatctc-----tttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt----ttctttgtgatttcatcatctaagtgtg 193  Q
       ||||||||      |||||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||||||    
T  25273795 cctcttcatcttcatcttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttttctttgtgatttcatcatctaagtgtg 25273894  T
Q  194 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaaga 293  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| |||||||||||||||||||||||||||||||||| |    
T  25273895 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaaa 25273994  T
Q  294 ttttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25273995 tttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatt 25274061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 34024677 - 34024349
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    ||||||||| |||||||||  || |||||| |||| |||||||||||| |||||||||||| |||||| |||   |||||||| ||||||||||||||||    
T  34024677 tctctctagattttttcttttagtttcttcattgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaa 34024578  T
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  34024577 tctaaataagttattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtatgacgttgtttg 34024478  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    ||||||| | ||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  34024477 attttccatcttcttgcggtgttctt-tgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggat 34024379  T
Q  331 attccggtcactttaattttatcatatatt 360  Q
    |||||||||| |||||||||||||||||||    
T  34024378 attccggtcattttaattttatcatatatt 34024349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 867978 - 868340
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||| ||||||||||  | |||||||||||||||||| |||||||| |||||| |||| |||||||||| |||| ||||||||| |||||| |||     
T  867978 ctctccaaaaagccggccctagttttctctctctaggttttctcttccagtttcttcattgaggggtggttttaggtcgattcttgacatgaaatcaccc 868077  T
Q  105 aacttcatctctttctctctatttcaa-------tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtg 196  Q
      |||||||| ||||||||||||||||       ||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  868078 ctcttcatctttttctctctatttcaaatttcaatctaaataagttattttcacatagatctagatttt-tctttgtgatttcatcatctaagtgtggtg 868176  T
Q  197 gtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  868177 gtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagattt 868276  T
Q  297 tagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
        || ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  868277 ggatgtgaacgttgtagatccggaggccatggatattccggtcactttaattttatcatatatt 868340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 9529147 - 9528788
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | ||| ||||| |||||||| |||| ||| ||||||  ||| ||||||||||||||||||||||||| |||||| |||    
T  9529147 cctctccaacaagtcggccctagttttatctctttaggttttctcttacagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcacc 9529048  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggttt 200  Q
       ||| |||| ||||||| |||||||||||||||||||||||| ||||||||| || |||||||  |||||||||||||||||||||||||| ||||||    
T  9529047 cctctttatctttttctctttatttcaatctaaataagtgattttcacatagatttatgttttttttctttgtgatttcatcatctaagtgtgatggttt 9528948  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||||||||||||||||||||||||||| |||| ||| | || ||||||| |||||||||||||||||||||||||||||||||||||||   |    
T  9528947 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggcc 9528848  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  9528847 gtcaacgttgcagatctggaggtcatggatattccggtcactttaattttatcatatatt 9528788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 53616896 - 53616561
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  ||||||||||| |||||  |||||||||||||||||| |||||| ||||  |||||||  ||||||| ||||    
T  53616896 tttctctctctaggttttctcttacaatttcttcgttgaggggtgactttgggtcaattcttgacctgaaatcaccactcttcatcgttttctctttatt 53616797  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53616796 tcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgt 53616697  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||||||| |||| ||| | |||||||||| ||||||||||||||||||| ||| |||||||||||||||  |||| ||||||||||||||||| ||     
T  53616696 tgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggca 53616597  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||| || |||||||    
T  53616596 atggatattccggtcactttaatttcattatatatt 53616561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 360
Target Start/End: Complemental strand, 43154286 - 43153925
Alignment:
Q  7 ctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa 106  Q
    ||||||||||  |||||  | ||||||||| |||||||| |||| ||  || | | ||||  ||||||||||||||||||||||||||||||| |||       
T  43154286 ctccaacaagttggccctagttttctctctttaggttttatcttacaatttatccattgagaggtggttttgggtcaattcttgacttgaaatcacccct 43154187  T
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt--------ctttgtgatttcatcatctaagtgtggtgg 197  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||| ||||| ||||||||||||    
T  43154186 cttcatct-tttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttgttttttctttgtgattttatcatttaagtgtggtgg 43154088  T
Q  198 tttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttt 297  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  43154087 tttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttg 43153988  T
Q  298 agcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43153987 agcgtcaacgttacagatccggaggccatggatattccggtcactttaattttatcatatatt 43153925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 6972630 - 6972988
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||  |||||| |||    
T  6972630 cctctccaacaagccggccctaattttctctctctaggttttttcttccggtttcttcattgg-gggtggttttgggtcaattcttgatctgaaatcacc 6972728  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||| | |||||  |||||||||||||||||||||||||||||||||||    
T  6972729 tctcttcatctttttatctgtatttcaatctaaataagtgacttttacatagatccatgttttttttctttgtgatttcatcatctaagtgtggtggttt 6972828  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||||||||||||||||||||||| ||| | || ||||| | |||||||| | |||| |||||||||||||||||||||||||||| |||  ||    
T  6972829 gttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaaggtttgggc 6972928  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  6972929 gtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatt 6972988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 4643683 - 4644036
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaact-- 108  Q
    |||||| ||||||  | ||||||| |||||||||| |||| |||  ||||| |||| |||||||||| ||| |||| ||||| |||||| |||   ||      
T  4643683 aacaagtcggccctagttttctctttctaggttttctcttacagtctcttcattgaggggtggttttaggtgaatttttgacctgaaatcacccccctct 4643782  T
Q  109 tcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||    
T  4643783 tcatctttttctctctatttcaatctaaataagtgatttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 4643882  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    |||||||||||||||||||||||||||| |||| ||  | |||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||     
T  4643883 cgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaaa 4643982  T
Q  307 gttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| | |||| |||||||||||| |||||||||||||||||||    
T  4643983 gttgcagatccggaggtcatgaatattccggtcaatttaattttatcatatatt 4644036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 38706951 - 38706621
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    ||||||||||||||||||| | | |||||| |||| ||||||||||||||||||||||||  | |||| |||   |||||||| ||||||||||||||||    
T  38706951 tctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctctctatttcaa 38706852  T
Q  132 tctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38706851 tctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgttt 38706752  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
     |||| |||| ||| | ||||||| || ||||| ||||||||||||||||||||||||| |||||||  || | ||||||||| ||||||| ||||||||    
T  38706751 catttcccgtcttcgtgcggtgttaatttgatttatattgaaagatcgattattcaatcgaagatttgggcatcaacgttgcaaatccggaggccatgga 38706652  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||| ||||||||||||||||||||||||||    
T  38706651 tatttcggtcactttaattttatcatatatt 38706621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 31381916 - 31381583
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| |||| |||| | | ||||||||||| ||||||||||||||||||||||||| |||||| |||     |||||| ||||||||| ||    
T  31381916 tttctctctctagattttctcttacggtttcttcgttgatgggtggttttgggtcaattcttgacctgaaatcaccccttctcatctttttctctctttt 31381817  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31381816 tcaatttaaataagtgattttcacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttg 31381717  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    ||||||||||||| ||| | ||||||| || ||||||||||| |||||||||||||||||||||||||||  |||| ||| ||||| || |||| | |||    
T  31381716 tttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttgggcgtcaacattgcaaattcggaggtcat 31381617  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    | ||| ||||||||||||||||||||||||||||    
T  31381616 gaatactccggtcactttaattttatcatatatt 31381583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 37188851 - 37188508
Alignment:
Q  14 aagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatc 113  Q
    ||||||||||  | |||||||||||||||||| ||||| ||||| ||| | || | ||||||||||||||||| ||||| |||||| ||  | |||||||    
T  37188851 aagccggccctagttttctctctctaggttttctcttctagatttttcatcgaggagtggttttgggtcaattattgacctgaaatcactcatcttcatc 37188752  T
Q  114 tctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 212  Q
    | ||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37188751 tttttctctatatttcaatctaaataagtgattttcacatatatctag-ttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgt 37188653  T
Q  213 cttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgca 312  Q
     |||||||||| |||||||||| |||  || || ||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||| |||||||||    
T  37188652 tttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgttgca 37188554  T
Q  313 gatccggaagccatggatattccggtcactttaattttatcatata 358  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  37188553 gatccggaggccatggatattcctgtcactttaattttatcatata 37188508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 33 - 360
Target Start/End: Original strand, 51317834 - 51318163
Alignment:
Q  33 ctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattctt-gacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||| || | ||||| || |||||| |||| ||||| |||||||||||||||| ||| |||||| ||  | |||||||| ||||||||||||||||    
T  51317834 ctctctagattgtctcttctagtttcttcattgaggggtgattttgggtcaattctttgacctgaaatcactcatcttcatctttttctctctatttcaa 51317933  T
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  51317934 tctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattgtttg 51318033  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    |||| |||| ||||| ||||||| || |||||||||||||||||| |||| |||||||||  ||||  |||| ||||||||||||||||| | |||||||    
T  51318034 atttcccgtcttcttgcggtgttaatttgattcatattgaaagattgattgttcaatcaacaatttgggcgtcaacgttgcagatccggaggtcatggat 51318133  T
Q  331 attccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||    
T  51318134 attccggtcactttaattttatcatatatt 51318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 9 - 360
Target Start/End: Original strand, 43444218 - 43444570
Alignment:
Q  9 ccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaact 108  Q
    |||||||||||||||  | |||||||||||||||||| |||| ||  | |||| |||| |||| |||||||||||||| ||||  |||||| ||| | ||    
T  43444218 ccaacaagccggccctagttttctctctctaggttttctcttacaattccttcattgaggggtagttttgggtcaatttttgatctgaaatcacccatct 43444317  T
Q  109 tcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  43444318 tcatctttttctctttatttcaatctaaataagtgattttcacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgtt 43444417  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    ||||||||||||||||||||||||||||||||| | | | |||||||||| ||||||||||||||||||||||| ||||||||||||| |  |||| |||    
T  43444418 cgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatatgggcgtcaac 43444517  T
Q  307 gttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||| ||  | ||| ||||||||||||||||||||| ||||||||||    
T  43444518 gttgcagatcc-gagacaatgaatattccggtcactttaatttcatcatatatt 43444570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 4 - 359
Target Start/End: Original strand, 20569072 - 20569432
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||||| |  | |||||| |||||||||||||| |  |  |||||| |||| |||||||||||||||||||||| || |||||| |||    
T  20569072 cctctccaacaagccggctctagttttctccctctaggttttttcgtataatttcttcattgatgggtggttttgggtcaattcttaacctgaaatcacc 20569171  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt----ctttgtgatttcatcatctaagtgtggtggt 198  Q
       |||||| | ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    |||| | |||||||||||||||||||||| |    
T  20569172 cctcttcatttttttctctttatttcaatctaaataaatgattttcacatagatctaggttttttttttctttataatttcatcatctaagtgtggtgat 20569271  T
Q  199 ttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttta 298  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  20569272 ttgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttg 20569371  T
Q  299 gcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatat 359  Q
    | || ||||||||| ||||  | || ||||||||||||||||||||||||| |||||||||    
T  20569372 gtgtcaacgttgcaaatccaaaggcaatggatattccggtcactttaatttcatcatatat 20569432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 50766780 - 50766423
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattct--tcgttgacgggtggttttgggtcaattcttgacttgaaataa 101  Q
    ||||||||||||||||||||  | ||| |||||||||||||| |||| ||  ||||  || ||||  |||||||||||||||||||||||  |||||| |    
T  50766780 cctctccaacaagccggccctagttttttctctctaggttttctcttacaatttctcttcattgagaggtggttttgggtcaattcttgatctgaaatca 50766681  T
Q  102 ccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtt 199  Q
     |   |||||||| ||||||| ||||||||||||||||| |||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| ||    
T  50766680 tccctcttcatctttttctctttatttcaatctaaataaatgattttcacatagatctaagtttttttctttgtaatttcatcatctaagtgtggtgatt 50766581  T
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    |||||||||||   ||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||    
T  50766580 tgttgttcgtc---ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgag 50766484  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  50766483 cgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 50766423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 10359788 - 10359459
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttca 130  Q
    ||||||||| |||| |||| ||| |||||| |||| ||| |||||||||||||||| ||||| |||||| ||| |||||||||| ||||||||||||||     
T  10359788 tctctctagattttctctttcagtttcttcattgagggggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctctctatttcg 10359689  T
Q  131 atctaaataagtgatttca-catagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  10359688 atctaaataagtgattttaacatatatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcggtgttgttt 10359589  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    ||||| |||| |||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||  || | |||||||||||||  | || ||||||    
T  10359588 gatttcccgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaataaaagatttgggcatcaacgttgcagatcttg-aggcatgga 10359490  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||||| ||||||||| ||||||||||||||    
T  10359489 tattccagtcactttatttttatcatatatt 10359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 1531726 - 1532086
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||| ||  | ||||||| |||||||||| |||| ||| |||||| |||| ||||||| ||||||||||||||||| |||||| |||    
T  1531726 cctctccaacaagccggtcctagttttctctttctaggttttctcttacagtttcttcattgaggggtggtattgggtcaattcttgacctgaaatcacc 1531825  T
Q  104 aaacttcatctctt-tctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtt 199  Q
       ||| |||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  1531826 cctctttatcttttctctctctatttcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtt 1531925  T
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    ||||||  ||||||||||| ||||||||||||||| | || ||| | ||||||| || |||||||| |||||||||| |||||||||||||| ||||  |    
T  1531926 tgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaaagatcaattattcaatcaaaaatttggg 1532025  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||||||| ||||| | ||||||||||| || ||||||||||||||||||||||    
T  1532026 cgtcaacgttgcagaaccggaggtcatggatattctggacactttaattttatcatatatt 1532086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 9283731 - 9284089
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | |||||||||||||||| | |||| ||  |||||| |||| |||||||||||||||||| ||| || |||||| |||    
T  9283731 cctctccaacaagtcggccctagttttctctctctaggttatctcttacaatttcttcattgaggggtggttttgggtcaatacttaacctgaaatcacc 9283830  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgatttc-acatagatctaggttttttc-tttgtgatttcatcatctaagtgtggtggtttg 201  Q
       |||||||  ||||||| ||||||||||||||||||||||||  |||||||||||||||||||  ||||| |||||||||||||||||||||| ||||    
T  9283831 cctcttcatcgttttctctttatttcaatctaaataagtgatttttacatagatctaggtttttttatttgtaatttcatcatctaagtgtggtgatttg 9283930  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||  |||    
T  9283931 ttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcg 9284030  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||| ||| || ||| ||||| | ||||||||||||| ||||||||||    
T  9284031 tcaacgttgcagatctggaggcaatgaatatttcagtcactttaatttcatcatatatt 9284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 6 - 341
Target Start/End: Complemental strand, 9645816 - 9645479
Alignment:
Q  6 tctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaa 105  Q
    ||||||||||||||||||  | ||||| |||||||| ||| |||| ||| |||||| |||| |||| |||||||||||||||||||| ||| || |||      
T  9645816 tctccaacaagccggccctagttttctttctctaggctttatcttacagtttcttcattgaggggtcgttttgggtcaattcttgacctgatatcacccc 9645717  T
Q  106 acttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgtt 203  Q
     |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  9645716 tcttcatctttttgtctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgtt 9645617  T
Q  204 gttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtt 303  Q
    ||||||||||||||||||||||||||||||||||||  || | || ||||||| ||||||||||||| ||||   | ||||||| ||||||||  ||||     
T  9645616 gttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattgagagataagtaattcaataaaagatttgggcgtc 9645517  T
Q  304 aacgttgcagatccggaagccatggatattccggtcac 341  Q
    ||| ||||||||||||| || |||||||||||||||||    
T  9645516 aacattgcagatccggaggcgatggatattccggtcac 9645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 34 - 360
Target Start/End: Complemental strand, 35965214 - 35964887
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatc 133  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| || || |||||| |||   |||||||| ||||||||||||||||||    
T  35965214 tctctaggttttctcttccagattcttcattgaggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctctctatttcaatc 35965115  T
Q  134 taaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttga 231  Q
    | ||||||||||||  |||||||||||||||||||| || |||||||| |||||  ||||||||||| |||||||||||||| |||| ||||||||||||    
T  35965114 tgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgtttga 35965015  T
Q  232 ttttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggata 331  Q
    ||| |||| || ||  ||||||||| ||||||||||| |||||||||||||||||||||||||||   ||| |||||||||||||||| || ||||  ||    
T  35965014 tttcccgtcttattgtggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccgg-aggcatgagta 35964916  T
Q  332 ttccggtcactttaattttatcatatatt 360  Q
    || | ||||||||||||||||||||||||    
T  35964915 tttcagtcactttaattttatcatatatt 35964887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 44947247 - 44947590
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaact-----tca-tctctttctc 121  Q
    |||||||||||| ||||| |||| ||| |||||| |||| ||||||||||||||||||||||||| |||||| |||   ||     ||  ||||| ||||    
T  44947247 tttctctctctaagttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctctctctctctctctctctctctc 44947346  T
Q  122 tctatttcaatctaaataagtgattt-cacatagatctaggtttt----ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttg 216  Q
    ||| | |||||||||||||||||||| | ||||||||||||||||    |||||||||||||||| |||||||||||||||||||||| | || ||||||    
T  44947347 tctctctcaatctaaataagtgattttcgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttgtcttg 44947446  T
Q  217 tgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatc 316  Q
    |||||||||||||||||| |||| ||| |  ||||||||| ||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  44947447 tgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatc 44947546  T
Q  317 cggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || | |||||||||||||||||||||||||||||||||||||||    
T  44947547 cgaaggccatggatattccggtcactttaattttatcatatatt 44947590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 107 - 357
Target Start/End: Complemental strand, 8009525 - 8009275
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8009525 cttcatctttttctctctatttcaatctaaataagtgattttcacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 8009427  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||| ||  ||||||| ||||||||||||||| ||||  |||| ||    
T  8009426 tcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacagaaagattgattattcaatcaaaaatttgggcgtcaa 8009327  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||| | ||||| |  |||||||||||||| ||||||||||||||||||||    
T  8009326 cgttgtatatccgaagaccatggatattccgatcactttaattttatcatat 8009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 29965566 - 29965813
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 212  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  29965566 tttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgt 29965665  T
Q  213 cttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgca 312  Q
    |||||||||||||||||||||| |||| ||  | |||||||||| |||||||||||||||||| |||| |||||||||||||||  || | |||||||||    
T  29965666 cttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcatcaacgttgca 29965765  T
Q  313 gatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |  ||||||||||||||||||||||||| ||||||||||    
T  29965766 gatccggaggtaatggatattccggtcactttaatttcatcatatatt 29965813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 110 - 354
Target Start/End: Original strand, 14183729 - 14183974
Alignment:
Q  110 catctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttc 207  Q
    ||||| |||||||||||||||||||||||||||||||| ||||  |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  14183729 catctttttctctctatttcaatctaaataagtgattttcacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttc 14183828  T
Q  208 gtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacg 307  Q
    || ||||||||||  |||||||||||||| || ||| | |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  14183829 gtagtcttgtgcgt-gttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacg 14183927  T
Q  308 ttgcagatccggaagccatggatattccggtcactttaattttatca 354  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||    
T  14183928 ttgcagaaccggagaccatggatattccggtcactttaattttatca 14183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 2115833 - 2115499
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| ||||||||| ||  || ||| |||| ||||||||||||||||||| ||||| |||||| ||    |||||||| ||||||| ||||    
T  2115833 tttctctctctagattttttcttacaatttattcattgaggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctctttatt 2115734  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||| ||||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||||||  ||    
T  2115733 tcaatctaaataagtgattttcacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgcgt-gt 2115635  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    ||||||||||  | | ||| | || | ||||| | ||||||||||||||||||||| |||||||||| ||||  |||| ||||||||||||||||| ||     
T  2115634 tgtttgatttctcatcttcgtgcgatattcatttaattcatattgaaagatcgattgttcaatcaaaaatttgggcgtcaacgttgcagatccggaggca 2115535  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||| ||||||||||||| ||||||||||    
T  2115534 atggatattccagtcactttaatttcatcatatatt 2115499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 32 - 296
Target Start/End: Original strand, 56194444 - 56194715
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggt---tttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctattt 128  Q
    |||||||||||||| || ||| | |||||| |||| |||||||   |||||||||||||||||| |||||| |     |||||||| |||||||||||||    
T  56194444 tctctctaggttttctcatcccgtttcttcattgaggggtggtggttttgggtcaattcttgacctgaaatcaaacctcttcatctttttctctctattt 56194543  T
Q  129 caatctaaataagtga-tttcacatagatctaggtttt---ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56194544 caatctaaataagtgactttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 56194643  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    |||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||| ||||||||||||    
T  56194644 tgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattatttaatcaaagattt 56194715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 28 - 355
Target Start/End: Original strand, 21089996 - 21090315
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctat 126  Q
    |||||||||||||||||| ||||| || |||||| |||| ||| |||||||||||||||  ||||  |||||| ||  | |||||||| |||||||||||    
T  21089996 tttctctctctaggttttctcttctagtttcttcattgagggggtggttttgggtcaatctttgatctgaaatcactcatcttcatctttttctctctat 21090095  T
Q  127 ttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| || ||||    
T  21090096 ttcaatataaataagtgattttcacatagatttaggttttttcttcgtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtacgacgtt 21090195  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgat--tattcaatcaaagattttagcgttaacgttgcagatccggaagc 323  Q
    |||||||||| ||| || || |||||||||| |||||||||||||| |||  ||  |||||||||||||||||             |||||||||||||     
T  21090196 gtttgatttttcgtttttttgcggtgttcatttgattcatattgaaggataaattatattcaatcaaagattt-----------gggcagatccggaag- 21090283  T
Q  324 catggatattccggtcactttaattttatcat 355  Q
    |||| |||||||||||||||||||||||||||    
T  21090284 catgaatattccggtcactttaattttatcat 21090315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 5 - 316
Target Start/End: Original strand, 2624318 - 2624631
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||||||||||  | ||| |||||||||||||| ||||| || |||||  |||| ||||| ||||||||  ||| ||||| |||||||||      
T  2624318 ctctccaacaagccggccctagttttttctctctaggttttctcttctagtttctttattgaggggtgattttgggttgatttttgacctgaaataactc 2624417  T
Q  105 aacttcatctctttctc-tctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttg 201  Q
    | | |||||| ||| |  |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||   ||||||||||| ||    
T  2624418 atcatcatctttttatagtctatttcaatctaaataagtgattttcacatagatctaggtttttttcttcgtgatttcgtcatg--agtgtggtggtgtg 2624515  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaaga-tcgattattcaatcaaagattttagc 300  Q
    ||||||||||||||||||||||| ||||||||| |||| || || ||||||| || ||||||||||||||||| ||||||||||||||||||| ||  ||    
T  2624516 ttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaatcaaagaattgggc 2624615  T
Q  301 gttaacgttgcagatc 316  Q
    || |||||||||||||    
T  2624616 gtcaacgttgcagatc 2624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 27 - 360
Target Start/End: Original strand, 12265297 - 12265640
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctcta 125  Q
    |||| |||||||||||||| ||||| |  |||||| || | ||| || |||| |||||||| ||||| |||||| |||   |||||||| ||| || |||    
T  12265297 atttttctctctaggttttctcttcaattttcttcattaagggggtgatttttggtcaatttttgacctgaaatcacccctcttcatctttttatcccta 12265396  T
Q  126 tttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||  |||||||  |||||| ||||||| ||||||||||||||||||| ||||||||    
T  12265397 tttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattttgtcatctgagtgtggcggtttgttgttcgtcgtct-gtgcggcg 12265495  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc------ 317  Q
    |||||||||||  |||||  ||  ||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||          
T  12265496 ttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 12265595  T
Q  318 --ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
      ||||| ||||| ||||||  |||||||||||||||||||||||    
T  12265596 atggaagacatgggtattccaatcactttaattttatcatatatt 12265640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 18139079 - 18138825
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||  ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||  ||||||| ||| || ||||||||||| |||||    
T  18139079 cttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttg 18138980  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||||||||||||||||||||||||| | || || | |||||||| |||||  ||||||||||||||||||||||||| | ||||  |||| |    
T  18138979 ttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggcgtca 18138880  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| ||  | ||| | ||||||| |||||| ||||||||||||||||    
T  18138879 acgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatt 18138825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 49126292 - 49126038
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||  ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||  ||||||| ||| || ||||||||||| |||||    
T  49126292 cttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttg 49126193  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||||||||||||||||||||||||| | || || | |||||||| |||||  ||||||||||||||||||||||||| | ||||  |||| |    
T  49126192 ttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttgggcgtca 49126093  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| ||  | ||| | ||||||| |||||| ||||||||||||||||    
T  49126092 acgttgcagatctgg-gggcattggtattccgatcacttaaattttatcatatatt 49126038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 177 - 360
Target Start/End: Original strand, 47417657 - 47417840
Alignment:
Q  177 ttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| |||||||||||||||||||    
T  47417657 ttcatcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T
Q  277 gattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||| |||||||||||||||  |||| ||||||||||||||||| || |||||||||||  |||||||||||| ||||||||||    
T  47417757 gattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccattcactttaatttcatcatatatt 47417840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 32952912 - 32952662
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| ||||||||||||||||  |||||||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||    
T  32952912 cttcatctttttctctctatttcaaattaaataagtgtttttcacatagatctag-ttttttctttgtgatttcgtcatctaagtgtgttggtgtgttgt 32952814  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    | |||||||| ||||| ||||||||||||||  | || ||||||||||||| | |||||||||||||   ||||||||||||||||||||| ||||| ||    
T  32952813 ttgtcgtcttatgcgg-gttgtttgattttca-tcttgttacggtgttcatttaattcatattgaaaatacgattattcaatcaaagatttgagcgtcaa 32952716  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||| ||||| || ||||||||||||||||| |||||||||||| ||||||    
T  32952715 tgttgcaggtccgg-agtcatggatattccggtcaatttaattttatcttatatt 32952662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 191 - 360
Target Start/End: Original strand, 49410232 - 49410401
Alignment:
Q  191 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaa 290  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| ||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaa 49410331  T
Q  291 agattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||  |||| ||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||    
T  49410332 agatttgggcgtcaacgttgcagatccggaggccgtgaatattcctgtcactttaattttatcatatatt 49410401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 32 - 290
Target Start/End: Original strand, 35261036 - 35261299
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaac----ttcatctctttc-tctctat 126  Q
    |||||||||||||| |||||  | |||||| |||| ||||| ||||||||||||| ||||| |||||||| ||  |    ||||||| |||| ||| |||    
T  35261036 tctctctaggttttctcttctcgtttcttcattga-gggtgattttgggtcaatttttgacctgaaataatcatcccctcttcatctttttcctctttat 35261134  T
Q  127 ttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    | ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||| |||||||||    
T  35261135 tgcaatctaaataagtgattttcacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgtt 35261234  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaa 290  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| ||||||| | |||||| ||||    
T  35261235 gtttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatcaactattcattcaa 35261299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 116 - 360
Target Start/End: Complemental strand, 46991287 - 46991042
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 213  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||  ||||||  |||||| ||||||||||| ||||||| ||||||    
T  46991287 tttctctctatttcaatctaaatgagtgattttcacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtc 46991188  T
Q  214 ttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcag 313  Q
    || || ||||||||||||||| || | || || |||||||||| ||||||||||||||| |||||||||||||||||||||||  | || ||||||||||    
T  46991187 ttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggtgtcaacgttgcag 46991088  T
Q  314 atccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||  | || |||   ||| ||| |||||||||||||||||||||||    
T  46991087 atctag-agacatatgtatcccgatcactttaattttatcatatatt 46991042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 49680460 - 49680715
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-----ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
    |||||||| ||||||| |||||||||| ||||||||||||| ||||| ||||||||||||     |||||||| |||||||||||||||||||||| |||    
T  49680460 cttcatctttttctctttatttcaatccaaataagtgattttcacatggatctaggtttttttttttctttgtaatttcatcatctaagtgtggtgattt 49680559  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    ||| ||||||||||||||  | ||||||||||||  ||| ||| | |||    ||| |||||||||||||||||| |||| |||||||||| ||||  ||    
T  49680560 gttattcgtcgtcttgtgttgtgttgtttgatttcacgtcttcgtgcgg---acatttgattcatattgaaagatagattgttcaatcaaatatttgggc 49680656  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  49680657 gtcaacgttgcagatccggatgcaat-gatatttcggtcactttaatttcatcatatatt 49680715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 186 - 360
Target Start/End: Complemental strand, 45228126 - 45227952
Alignment:
Q  186 taagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattca 285  Q
    ||||||||||||||||||||||| ||||||||||||  |||||| |||| |||| ||| |||| | ||||| ||||| | ||||||||||||||||||||    
T  45228126 taagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattca 45228027  T
Q  286 atcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||  |||| |||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||    
T  45228026 atcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatcatatatt 45227952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 116 - 359
Target Start/End: Complemental strand, 52098076 - 52097828
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtt---tgttgttcgtc 210  Q
    |||||| |||||||||||||||||||||||||  | |||||| |||  |||| |||| |||||||  |||||  |||||||||||    ||||||| ||     
T  52098076 tttctccctatttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccgagtgtggtggtggtgtgttgtttgtt 52097977  T
Q  211 gtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag-cgttaacgtt 309  Q
    ||||||||| | |||||||||||| || |||||||   |||||||| ||||||||||||||||||| |||||||||||||||||||  | ||| ||||||    
T  52097976 gtcttgtgcagagttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggccgtcaacgtt 52097877  T
Q  310 gcagatccggaagccatggatattccggtcactttaattttatcatatat 359  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  52097876 gcagatctggatg-catggatattccggtcactttaattttatcatatat 52097828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 125 - 359
Target Start/End: Complemental strand, 3336304 - 3336076
Alignment:
Q  125 atttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg-c 222  Q
    ||||||||||||| |||| |||| |||||  |||||||||||||||| |||||||  |||||| ||||||||||| |||||||||||||| ||||||| |    
T  3336304 atttcaatctaaacaagttattttcacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggac 3336205  T
Q  223 gttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaag 322  Q
    ||||||||||||||| | || || |||||||||| |||||||||||||||||| ||||||||||||||||| ||| |||| | | |||||||||||||      
T  3336204 gttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagattgattattcaatcaaaga-tttggcgtcagcattgcagatccgga-- 3336108  T
Q  323 ccatggatattccggtcactttaattttatcatatat 359  Q
         || |||||| ||| ||||||||||||||||||    
T  3336107 -----gacattccgatcattttaattttatcatatat 3336076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 33 - 360
Target Start/End: Complemental strand, 27594076 - 27593740
Alignment:
Q  33 ctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaat 132  Q
    ||||||||||||| |||||||  |||||| |||| ||||| |||| |||||||| ||||| |||||| |||   |||||||| ||||||| |||||||||    
T  27594076 ctctctaggttttctcttccac-ttcttcattgatgggtgattttaggtcaatttttgacatgaaatcaccct-cttcatctttttctctatatttcaat 27593979  T
Q  133 ctaaataagtgattt-------------cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    ||||||||| || ||             ||||||||||||  ||||||||| |||||||| | |||| ||||||||||| ||||||||||| ||||||||    
T  27593978 ctaaataagcgagtttcacatagatcttcacatagatctatattttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgc 27593879  T
Q  220 ggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgg 319  Q
    | | || |||||||| |||| || || || |||| || | |||||||||||||||||||||||||||| ||||| ||| | || ||| ||||||||| ||    
T  27593878 gactttttttgatttcccgtctttttgcgatgtttatttaattcatattgaaagatcgattattcaataaaaga-tttggagtcaacattgcagatctgg 27593780  T
Q  320 aagccatggatattccggtcactttaattttatcatatatt 360  Q
     |||||||  |||||| ||||||||||||||||||||||||    
T  27593779 -agccatgagtattcctgtcactttaattttatcatatatt 27593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 47416736 - 47416881
Alignment:
Q  36 tctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatcta 135  Q
    |||||||||| |||| ||  |||||| |||| ||||| ||||||||||||| |||||||||||| |||   |||||||| ||||||| ||||||||||||    
T  47416736 tctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctctttatttcaatcta 47416835  T
Q  136 aataagtga-tttcacatagatct-aggttttttctttgtgatttc 179  Q
    ||||||||| |||||||||||||| || |||||||||||| |||||    
T  47416836 aataagtgattttcacatagatctaagtttttttctttgtaatttc 47416881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 264
Target Start/End: Complemental strand, 1931856 - 1931723
Alignment:
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||  |||||||| || | ||||||     
T  1931856 tctaaataagttattttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttc 1931757  T
Q  231 attttccgtattcttacggtgttcatctgattca 264  Q
    |||| |||| || || |||||||||| |||||||    
T  1931756 atttcccgtcttgttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 5333797 - 5333657
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||    ||| |||||||||||||| |||||| | |||||| |||  ||||||||||||||||||| ||||| |||||| |||    
T  5333797 cctctccaacaagccggccctaattttttctctctaggttttctcttcccgtttcttcattg--gggtggttttgggtcaatttttgacatgaaatcacc 5333700  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt 147  Q
       |||||||| ||||||||||||||||| ||||||||||||||    
T  5333699 ct-cttcatctttttctctctatttcaatataaataagtgattt 5333657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 23100745 - 23100853
Alignment:
Q  248 ggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaat 347  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||| || || || ||||||||||| || | ||||| |||| |||||| ||||||    
T  23100745 ggtgttcatttgattcatattgaaagatcaattattcaatcaatgatttgagtgtcaaagttgcagatcc-gatgtcatgggtatttcggtcaatttaat 23100843  T
Q  348 tttatcatat 357  Q
    | ||||||||    
T  23100844 tgtatcatat 23100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 28857377 - 28857484
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    |||||||||||||| |||||||| || | | |||||||||| |||||||||||||||||||||||   ||| |  || |||||||| | || ||||||||    
T  28857377 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatatt 28857476  T
Q  269 gaaagatc 276  Q
    ||||||||    
T  28857477 gaaagatc 28857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 296
Target Start/End: Complemental strand, 41255584 - 41255355
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt 166  Q
    |||| |||||||||||||| ||||| | |||| | ||| |||||||| |||||  |||||| | ||| || | ||||||| |||||| || |||||||||    
T  41255584 gggttgttttgggtcaatttttgacctaaaatcatcaatcttcatctttttctacctattt-actcttaacacgtgattttcacataaatttaggttttt 41255486  T
Q  167 tcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    |  || |||||||| ||  |||||| | ||| | ||||||| || |||||||||| |||| ||| |||| |||| ||||| ||  |||||| ||||||||    
T  41255485 ttattcgtgatttcgtcgactaagtatagtgttatgttgtttgttgtcttgtgcgacgttatttaatttcccgtcttcttgcgacgttcatttgattcat 41255386  T
Q  266 attgaaagatcgattattcaatcaaagattt 296  Q
    | |||||||||   ||||||||||| |||||    
T  41255385 actgaaagatcagatattcaatcaatgattt 41255355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 5333658 - 5333585
Alignment:
Q  74 ttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt 147  Q
    ||||||||||||| ||||| |||||| ||  | |||||||| ||||||||||||||||| ||||||||||||||    
T  5333658 ttttgggtcaatttttgacctgaaatcacacatcttcatctttttctctctatttcaatataaataagtgattt 5333585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 36204558 - 36204415
Alignment:
Q  134 taaataagtgatttc-acatagatctagg---ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg-cgttgtt 228  Q
    ||||||||||||||| ||||||||| ||    ||||||||| |||||||| || |||||||| || | | |||||||||||||| ||| ||| |||||||    
T  36204558 taaataagtgatttccacatagatcaagtgttttttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtt 36204459  T
Q  229 tgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    ||||||  | |||| || |||||||||| || ||||||||||||    
T  36204458 tgatttcgcatattgttgcggtgttcatttggttcatattgaaa 36204415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 1008185 - 1008289
Alignment:
Q  74 ttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttg 172  Q
    |||||| |||||  |||||||||||| ||  | || ||||| ||||||||||||| ||||||||||||||| ||||||||| || ||| ||||||||| |    
T  1008185 ttttggatcaatatttgacttgaaatcactcatctgcatctttttctctctattttaatctaaataagtgattttcacataaatttagtttttttcttcg 1008284  T
Q  173 tgatt 177  Q
    |||||    
T  1008285 tgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 35351326 - 35351250
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgat-ttcacatagatctaggttttttctttgtgatttcatc 182  Q
    |||||||  |||| || ||||||||| |||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  35351326 cttcatccttttcgctttatttcaatttaaataagtgatattcacatagatctaggttttttctacgtgatttcatc 35351250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 52944317 - 52944393
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||| |||||||||||||||| ||||| ||| || || |||||||| | || ||||||||||||||||    
T  52944317 tgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 56199218 - 56199274
Alignment:
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||    
T  56199218 aacgttgcagatccgaaagccatgaatattccgatgactttaattttatcatatatt 56199274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 18048889 - 18048964
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||| ||||||||||| |||||||||||||||| ||  || || |||||||| | ||||||||||||||||||    
T  18048889 tgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagat 18048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 28834238 - 28834164
Alignment:
Q  282 ttcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||| |||||||| || ||||||| ||||||||| | ||||  ||||||||||||||||||||||||||||    
T  28834238 ttcaatcaacgattttagtgtcaacgttgtagatccgga-gacatgactattccggtcactttaattttatcatat 28834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 43853448 - 43853521
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaag 273  Q
    |||||||| || |||||||||||||||||||||||  |||||| || ||||| |||| || |||||||||||||    
T  43853448 tgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 32766492 - 32766548
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| |||| | ||||||||||||||||||||||||||    
T  32766492 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 32766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 356
Target Start/End: Original strand, 36184599 - 36184706
Alignment:
Q  248 ggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaat 347  Q
    ||||||||| |||||  ||||||||||||| |||||||||||| |||||| | || ||||||| ||||| || || |||  |||||  ||||||||| ||    
T  36184599 ggtgttcatttgatttctattgaaagatcggttattcaatcaatgattttggtgtcaacgttgtagatcagg-aggcataaatattatggtcactttgat 36184697  T
Q  348 tttatcata 356  Q
    |||||||||    
T  36184698 tttatcata 36184706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 27651872 - 27651980
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || ||| ||||    | | |||||||||||||||||||||| |    
T  27651872 tttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtg 27651969  T
Q  224 ttgtttgattt 234  Q
    |||||||||||    
T  27651970 ttgtttgattt 27651980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 36194637 - 36194745
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    ||||||| |||||||||||||| |||||| ||| ||  ||||||||| |||||||| |  ||| |||| |  | | ||||||||||||||||||||||||    
T  36194637 tttcaatttaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcg 36194734  T
Q  224 ttgtttgattt 234  Q
    |||||||||||    
T  36194735 ttgtttgattt 36194745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 50179615 - 50179686
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaat 99  Q
    ||||||||||||| |||| |||| ||| |||| | |||| |||||||||||||||||||||| || ||||||    
T  50179615 tttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaat 50179686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 296
Target Start/End: Complemental strand, 21554957 - 21554783
Alignment:
Q  124 tatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtctt-gtgcgg 221  Q
    ||||||| || ||||||||||||| |||||| |||||| | |||||||||||||||| |  ||| |||| ||||   ||||||||||| |||| |||| |    
T  21554957 tatttcattcgaaataagtgattttcacataaatctagatattttctttgtgatttcgttgtctgagtgaggtgacgtgttgttcgtcatcttagtgccg 21554858  T
Q  222 cgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    | |||||||||||  ||| || ||  | ||||||| |||||  ||| | |||||| | ||||||||||| |||||    
T  21554857 cattgtttgatttctcgtcttgttgtgatgttcatttgatttctatcggaagatcaactattcaatcaatgattt 21554783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 22300855 - 22300889
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  22300855 tgttgttcgtcgtcttgtgcggcgttgtttgattt 22300889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 35348279 - 35348341
Alignment:
Q  163 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||| ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  35348279 tttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 35348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 47320494 - 47320460
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  47320494 tgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 4142886 - 4142821
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||  |||||||||    
T  4142886 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgattt 4142821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 9645470 - 9645437
Alignment:
Q  325 atggatattccggtcactttaattttatcatata 358  Q
    ||||||||||||||||||||||||||||||||||    
T  9645470 atggatattccggtcactttaattttatcatata 9645437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 43353629 - 43353512
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattg-----aaagatcgattattcaatcaaagat 294  Q
    ||||||||||||||||||| | ||||||||||||||   | || |||||  |||||| |||||| |||||     ||| |||| |||||||||||| |||    
T  43353629 tgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgttacgtcgttcatttgattcctattgaaataaaatatcggttattcaatcaatgat 43353530  T
Q  295 tttagcgttaacgttgca 312  Q
    || ||||| |||||||||    
T  43353529 ttgagcgtcaacgttgca 43353512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 56156778 - 56156717
Alignment:
Q  164 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||| ||||||||||| || ||||||||||| | | ||||||||||||||||||| ||||||    
T  56156778 ttttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt 56156717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 22611161 - 22611217
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  22611161 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 22611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 296
Target Start/End: Complemental strand, 52204433 - 52204340
Alignment:
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    |||||||||||||||||| | | |||||||||||| ||| || ||||||||||| | |||||   ||| ||||||||||  ||||||||| |||||    
T  52204433 gttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttcgtttgattaccattaaaagatcgat--ttcaatcaatgattt 52204340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 53811006 - 53811062
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||| ||||| |||||||| || || | ||||||||||||||||||||||||||||    
T  53811006 tttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtcttgtgcggcgtt 53811062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 56040777 - 56040721
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || | |||||| || | ||||||||||||||||||||||||||||    
T  56040777 tttgtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 56040721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 2520755 - 2520813
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtg--gtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| ||||  || ||||||||||||||||||||||||||    
T  2520755 tttgtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtcttgtgcggcgtt 2520813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 21405532 - 21405607
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||| ||||||||| ||| | |||||||||||| ||| ||  | |||||||||| ||||||||||| ||||||    
T  21405532 tgttgtttgtcgtcttgggcgacattgtttgatttttcgtcttgatgcggtgttcatttgattcatattaaaagat 21405607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 29961049 - 29961002
Alignment:
Q  175 atttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    |||||||| ||||||||||| | | |||||||||||||||||||||||    
T  29961049 atttcatcgtctaagtgtggggttgtgttgttcgtcgtcttgtgcggc 29961002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 3338894 - 3338816
Alignment:
Q  42 ttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttct 120  Q
    |||| |||||||| |||||| ||||  |||||||||||||||||| ||||| | |||| | ||| |||||||| |||||    
T  3338894 ttttctcttccagtttcttcattgagaggtggttttgggtcaatttttgacctaaaatcatcaatcttcatctttttct 3338816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 9145989 - 9145955
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||||||||||||||| |||||||||||    
T  9145989 tgttgttcgtcgtcttgtgcggcattgtttgattt 9145955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 11300122 - 11300072
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    ||||||||||| || |||||||| |||| | ||||||||||||||||||||    
T  11300122 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgc 11300072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 19853497 - 19853445
Alignment:
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||||||||||||| |||||||||| |||| |||| | |||||||||||    
T  19853497 aacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat 19853445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 21662541 - 21662613
Alignment:
Q  284 caatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||||| |||| |||| ||||   |||||||||||    
T  21662541 caatcaatgatttgagcgtcaacgttgcagatccggaag-catgggtatttcggtgacttaggttttatcatat 21662613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 21671305 - 21671377
Alignment:
Q  284 caatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||||| |||| |||| ||||   |||||||||||    
T  21671305 caatcaatgatttgagcgtcaacgttgcagatccggaag-catgggtatttcggtgacttaggttttatcatat 21671377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 26633802 - 26633749
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    ||||||||||| || |||||||| || | | |||||||||||||||||||||||    
T  26633802 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 26633749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 36161719 - 36161792
Alignment:
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    |||||||| |||||||||| |||||||||||||| ||| || || |||||||| | |  ||||||| |||||||    
T  36161719 ttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagat 36161792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 1008319 - 1008363
Alignment:
Q  252 ttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    ||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  1008319 ttcatttgattcatattaaaatatcgattattcaatcaatgattt 1008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 2069718 - 2069611
Alignment:
Q  164 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattc 263  Q
    |||| ||||||||||| | |||||||||||| | | ||| ||||||| || |||||| |||||||||||||  | | || || |||| ||||| || |||    
T  2069718 ttttttttgtgatttctttatctaagtgtggcgttatgt-gttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttc 2069620  T
Q  264 atattgaaa 272  Q
    |||||||||    
T  2069619 atattgaaa 2069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 21686372 - 21686317
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  21686372 tttgtgatttcgtcgtctaagtgcggcg-tgtgttgttcgtcgtcttgtgcggcgtt 21686317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 33921155 - 33921230
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||||  |||| ||||| ||||||||||||||||||| ||||| |||| | || ||||  ||||||||||||    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccggaag-catgggtatttcagtgacttagattttatcatat 33921230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 44596642 - 44596698
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||||  | | | ||||||||||||||||||||||||    
T  44596642 tttgtgatttcctcgtctaagtgtgacgttgtattgttcgtcgtcttgtgcggcgtt 44596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 47158205 - 47158245
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgt 209  Q
    ||||||||||| ||||||||||| |||| ||||||||||||    
T  47158205 tttgtgatttcgtcatctaagtgaggtgttttgttgttcgt 47158245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 49072914 - 49072858
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttcttt 171  Q
    ||||||| |||||||||||| |||||||| |||||||||||| ||  ||||||||||    
T  49072914 tttctctttatttcaatctatataagtgattttcacatagatttatattttttcttt 49072858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 51888314 - 51888238
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||| ||||||| |||| |||||||||||||  | | || || |||||||| | || ||||||||||||||||    
T  51888314 tgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatc 51888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 36 - 360
Target Start/End: Complemental strand, 2808707 - 2808383
Alignment:
Q  36 tctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatcta 135  Q
    ||||||||||||||| ||  |||||| |||| ||||||||||||||||||||||||| |||||| |||   |||||||| ||||||||||||||| ||||    
T  2808707 tctaggttttttctttcattttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctatttctctctatttcagtcta 2808608  T
Q  136 aataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2808607 aataagtgattttcacatagatctaggttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 2808509  T
Q  235 tccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattc 334  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  2808508 tccgtattcttgcgatgttcatctgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgcagatccggaagccatggatattc 2808409  T
Q  335 cggtcactttaattttatcatatatt 360  Q
    || |||||||||||||||||||||||    
T  2808408 cgatcactttaattttatcatatatt 2808383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 32913078 - 32913410
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||| |||||||||||| ||||| ||||| |   | || |||||||||||| |||||||||||| |||||| |||   ||| |||  ||||||| ||||    
T  32913078 tttctttctctaggttttctcttctagattttaaatcgaggggtggttttggatcaattcttgacctgaaatcacccctcttgatccttttctctatatt 32913177  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32913178 tcaatttaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctg 32913277  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  32913278 tttgattttccgtcttcttacggtgttcatctgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccat 32913376  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  32913377 ggatattacggtcactttaattttatcatatatt 32913410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 6173445 - 6173802
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    ||||||||||||||| |||  | |||||||||||||||||| | || | | |||||| |||| |||||||||| |||| ||||||||| |||||| |||     
T  6173445 ctctccaacaagccgaccctagttttctctctctaggttttcttttacggtttcttcattgaggggtggttttcggtctattcttgacctgaaatcaccc 6173544  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
      |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  6173545 ctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatcgaagtgtggtggtttgt 6173644  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||| |||||||| |||||||||||||||||| | ||  | |||||||||| |||||||||||||||||||||| ||||||||||||||||  ||||    
T  6173645 tgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatcgatcattcaatcaaagatttgggcgt 6173744  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  6173745 caacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatt 6173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 45128041 - 45128374
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| ||||||   |||||| |||| ||||||||||||||||||||||||| |||||| |||   |||||||| ||||||| ||||    
T  45128041 tttctctctctaggttttctcttcccatttcttcattga-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatt 45128139  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45128140 tcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 45128239  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||| |||  | | ||||| |||||||||| | |||| |||||||| ||| |||||||||||||||||||   ||||||||||||||||||||||||||    
T  45128240 gtttgctttctcatcttcttgcggtgttcattttattcctattgaaatatcaattattcaatcaaagatttggacgttaacgttgcagatccggaagcca 45128339  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| |||||||||||||||||||||    
T  45128340 tggatattccggtgactttaattttatcatatatt 45128374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 9986592 - 9986253
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttca--tctctttctctcta 125  Q
    |||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||||||| |||||| | |   |||||  | | ||| ||||||    
T  9986592 tttctctctctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcaattttttttatctcta 9986493  T
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttt----tttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 220  Q
     ||||||||||||||||||||| |||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9986492 attcaatctaaataagtgattttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 9986393  T
Q  221 gcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgga 320  Q
    ||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||| ||||    
T  9986392 gcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaattaaagatttgggcgtcaacgttgcagattcgga 9986293  T
Q  321 agccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||| |||||||||||||||||||||||||||||||    
T  9986292 ggccatgggtattccggtcactttaattttatcatatatt 9986253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 348
Target Start/End: Original strand, 30420489 - 30420836
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  |  ||||||||||||||||||| || ||  |||||| |||| |||||||||||| |||||| ||||| |||||| |||    
T  30420489 cctctccaacaagccggccctagtcttctctctctaggtttttttttacaatttcttcattgaggggtggttttggatcaatttttgacctgaaatcacc 30420588  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| |||    
T  30420589 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgattt 30420688  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||| |||| |||||||||||||||  ||    
T  30420689 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatagattgttcaatcaaagatttgggc 30420788  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaatt 348  Q
    || ||||||||||||||||| || ||||||||||| ||||||||||||    
T  30420789 gtcaacgttgcagatccggaggcaatggatattccagtcactttaatt 30420836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 36233817 - 36234178
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | ||||||||||||| |||| |||| ||  |||||| |||| |||||||||||||||||||| |||| |||||| |||    
T  36233817 cctctccaacaagtcggccctagttttctctctctagattttctcttgcaatttcttcattgaggggtggttttgggtcaattcatgacctgaaatcacc 36233916  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctag----gttttttctttgtgatttcatcatctaagtgtggtggt 198  Q
       |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||     |||||||||||| |||||||||||||||||||||| |    
T  36233917 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagattttttttttctttgtaatttcatcatctaagtgtggtgat 36234016  T
Q  199 ttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttta 298  Q
    || ||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||      
T  36234017 tttttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgg 36234116  T
Q  299 gcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  36234117 gcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 36234178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 56 - 361
Target Start/End: Complemental strand, 3270445 - 3270139
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| ||  |  ||||||| ||||| | |||||||||||||||||||||||| |||||||    
T  3270445 ttcttcattgaggggtggttttgggtcaattcttgacctgaaatcactcattttcatctttttctttttatttcaatctaaataagtgattttcacatag 3270346  T
Q  155 atctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttc 254  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||| | ||||||||    
T  3270345 atctaggttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttc 3270246  T
Q  255 atctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatca 354  Q
    || |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||||  |    
T  3270245 atttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttacta 3270146  T
Q  355 tatattc 361  Q
    |||||||    
T  3270145 tatattc 3270139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 21570676 - 21570319
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||| ||||||  | ||||| |||||||||||| ||||||||||| ||| ||||  |||||||||||||||||||||||| |||||| |||     
T  21570676 ctctccaacaaggcggccctagttttctgtctctaggttttctcttccagatttttcattgagtggtggttttgggtcaattcttgacctgaaatcaccc 21570577  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctag--gttttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
      |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||    
T  21570576 ctcttcatctttttctctatatttcaatctaaataagtgattttcacatagatctagattttttttttttgtgatttcatcatctaagtgtggtggtttg 21570477  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||| | ||||||||  ||| |||| ||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||  |||    
T  21570476 ttgttcgtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcg 21570378  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | || |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  21570377 tcaatgttgcagatccggaggccatgaatattccgttcactttaattttatcatatatt 21570319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 27249396 - 27249062
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  |||||| |||| |||||||||||||||||| |||||| |||||| |||   |||||||| ||||||| ||||    
T  27249396 tttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatt 27249297  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  27249296 tcaatctaaataagtgattttcacatagatctaggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgtt 27249197  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| | |||||||||||| || || |    
T  27249196 gtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcagcgttgcagatcctgaggcaa 27249097  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||||||||| ||||||||||    
T  27249096 tggatattccggtcactttaatttcatcatatatt 27249062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 71 - 360
Target Start/End: Complemental strand, 7015912 - 7015622
Alignment:
Q  71 tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttct 169  Q
    |||||||||||||||||||||| |||||| |||   | | |||| ||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||     
T  7015912 tggttttgggtcaattcttgacctgaaatcacccctcctaatctttttctctttatttcaatctaaataattgattttcacatagatttaggttttttcc 7015813  T
Q  170 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattg 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||||||    
T  7015812 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattg 7015713  T
Q  270 aaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| |||||||||||||||||||||||  |||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||    
T  7015712 aaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaatgccatggatattcccgtcgctttaattttatcatatatt 7015622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 311
Target Start/End: Original strand, 34598799 - 34599108
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaat-aac 102  Q
    ||||||||||||||||||||    |||||||||||||||||| |||| | | ||||||||||| |||||||||||| |||||||||||| | |||| |||    
T  34598799 cctctccaacaagccggccctaattttctctctctaggttttctcttaccgtttcttcgttgaggggtggttttggatcaattcttgacctcaaatcaac 34598898  T
Q  103 caaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
      | |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  34598899 tcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttg 34598998  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    |||||| ||||||||||||||||||||||||||||| | ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||  |||    
T  34598999 ttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcg 34599098  T
Q  302 ttaacgttgc 311  Q
    | ||||||||    
T  34599099 tcaacgttgc 34599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 4192675 - 4193007
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||||||||  |||| ||||| | | | || | |||||||||| |||||| ||||| ||| || |||   |||||||| ||||||| ||||    
T  4192675 tttctctctctaggttttcccttctagattttccatcgaggtgtggttttggatcaatttttgacctgagatcacccctcttcatctttttctctatatt 4192774  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  4192775 tcaatctaaataagtgattttcacatatatttaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtggtgttg 4192874  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| ||||| | ||||||||||||||||| ||| ||||||||||||||  |||||||||| ||||| ||||||||||||||||| |||||    
T  4192875 tttgatttcccgtcttcttgcagtgttcatctgattcattttg-aagatcgattattccgtcaaagatttgagcgtcaacgttgcagatccggaggccat 4192973  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
     |||||||||||||||||||||||||||||||||    
T  4192974 agatattccggtcactttaattttatcatatatt 4193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 20047326 - 20046993
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| | | |||||| |||  |||| ||||||| |||||||||||| |||||| |||  | ||||||| ||||||||| ||    
T  20047326 tttctctctctaggttttctcttaccgtttcttcattggggggtagttttggatcaattcttgacctgaaatcacccta-ttcatctttttctctctttt 20047228  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||| ||| |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20047227 tcaatctaaataagtgacttttacatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 20047128  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    |||||||||   || |||||||||||||||| | |||| ||||||||||||||||||||||||||||||||   | | ||||||||||||||||| ||||    
T  20047127 gtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacatcaacgttgcagatccggaggcca 20047028  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    || |||||||||| |||||||||||||||||||||    
T  20047027 tgaatattccggtgactttaattttatcatatatt 20046993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 8805782 - 8806036
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||| | ||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8805782 cttcatatttttctctttatttcaatttaaataagtgattttcacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgttgt 8805881  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    ||||||||||||||| ||||||||||||| |||| ||| |  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||    
T  8805882 tcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtcaa 8805981  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  8805982 cgttgcagattcggaggtcatggatattccggtcactttaattttatcatatatt 8806036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 14 - 349
Target Start/End: Complemental strand, 40660187 - 40659854
Alignment:
Q  14 aagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatc 113  Q
    ||||||||||  | ||||||| | ||| |||| ||||  || |||||| |||| ||||||||||| ||||||||||||| |||||| ||  | |||||||    
T  40660187 aagccggccctagttttctctttttagattttctcttagagtttcttcattga-gggtggttttgagtcaattcttgacctgaaatcacacatcttcatc 40660089  T
Q  114 tctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 212  Q
    | |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40660088 tttttctct--atttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgt 40659991  T
Q  213 cttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgca 312  Q
    |||||||||||||||||||||| |||| ||| | || || |||| |||||| || |||||||||||||||||||||||||||||  |||| ||||||| |    
T  40659990 cttgtgcggcgttgtttgatttcccgtcttcgtccgatgctcatttgattcttactgaaagatcgattattcaatcaaagatttgggcgtcaacgttgga 40659891  T
Q  313 gatccggaagccatggatattccggtcactttaattt 349  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40659890 gatccggaggccatggatattccggtcactttaattt 40659854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 8971873 - 8971539
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctct--a 125  Q
    ||||||||| ||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||| |||||| | |   |||||||| |||||||||  |    
T  8971873 tttctctctttaggttttttcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatctttttctctcttta 8971774  T
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  8971773 ttttaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgt 8971674  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||||||| || | ||| | || ||||||| ||||||||| ||||||||| |||| ||||| ||||||||    || |||||||||||||| || | |    
T  8971673 tgtttgatttcccatcttcgtgcgatgttcatttgattcataatgaaagatcaatta-tcaattaaagatttggatgtcaacgttgcagatccagatgtc 8971575  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    || |||||||||||||||||||||||||||||||||    
T  8971574 attgatattccggtcactttaattttatcatatatt 8971539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 32 - 360
Target Start/End: Original strand, 25086874 - 25087207
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||||| | |||||| || | ||||||||||||||||||| ||||| |||||| |||   |||||||| ||||  ||||||| ||    
T  25086874 tctctctaggttttctcttccggtttcttcatttaggggtggttttgggtcaattattgacctgaaatcacccctcttcatctttttccatctatttgaa 25086973  T
Q  132 tctaaataagtga-----tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||| ||||||||     ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25086974 tctatataagtgagtgattttcacatagatctaggttttttatttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttg 25087073  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||| ||| || | ||||| | |||||||  | ||||||||| ||||||||||||||||||||| |||||   ||| |||||||||||| | ||||||||    
T  25087074 tttgctttcccttcttcttgcagtgttcaatttattcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttgcagattcagaagccat 25087173  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||| ||||||||||| ||||||||||||    
T  25087174 ggatattccagtcactttaatcttatcatatatt 25087207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 63 - 360
Target Start/End: Original strand, 3725052 - 3725350
Alignment:
Q  63 ttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctagg 161  Q
    |||| ||||||||||||||||||| ||||| | |||| |     |||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |     
T  3725052 ttgaggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctctctatttcaatataaataagtgattttcacatagatcttga 3725151  T
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||| ||  |  ||||||| | ||||    
T  3725152 ttttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgat 3725251  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| || ||||| ||||||||| ||||||||||||| |||||||||    
T  3725252 tcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgtagatccagaggccatagatattccgatcactttaattttttcatatatt 3725350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 107 - 350
Target Start/End: Complemental strand, 26025575 - 26025331
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||     
T  26025575 cttcatctttttctctctatttcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatgtaagtgtggtagtttgttgg 26025476  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||| |||||||| ||||||||||| ||||||||||||| ||||  | || ||    
T  26025475 tcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcggttattcaatcaaaaatttgggtgtcaa 26025376  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaatttt 350  Q
     |||||||||||||| || ||| ||||||| ||||||||||||||    
T  26025375 tgttgcagatccggaggcgatgaatattccagtcactttaatttt 26025331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 134 - 361
Target Start/End: Complemental strand, 3269251 - 3269021
Alignment:
Q  134 taaataagtgattt-cacatagatctaggttttttcttt--gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  3269251 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttg 3269152  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| | |||||||    
T  3269151 attttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggat 3269052  T
Q  331 attccggtcactttaattttatcatatattc 361  Q
    |||||||||||||||||||||  ||||||||    
T  3269051 attccggtcactttaattttactatatattc 3269021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 134 - 361
Target Start/End: Complemental strand, 3269810 - 3269580
Alignment:
Q  134 taaataagtgattt-cacatagatctaggttttttcttt--gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    |||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  3269810 taaataagtgattttcacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttg 3269711  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    ||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| | |||||||    
T  3269710 attttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatggat 3269611  T
Q  331 attccggtcactttaattttatcatatattc 361  Q
    |||||||||||||||||||||  ||||||||    
T  3269610 attccggtcactttaattttactatatattc 3269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 22421660 - 22421898
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22421660 tttctctctatttcaatctaaataagtgactttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatct 22421759  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    || |||| |||||||||||| || | ||||| |||||||||| |||||| |||||||||||||||||||||||||| |||||  |||| |||||| ||||    
T  22421760 tgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattcaatcaatgatttgggcgtcaacgttacaga 22421859  T
Q  315 tccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||       |||||||||||||||||| ||||||||||||||    
T  22421860 tccgga-------gatattccggtcactttagttttatcatatatt 22421898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 41430943 - 41431198
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggt-tttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| ||||||| ||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41430943 cttcatctttttctctatatttcaatctaaataagtcacttttacatagatctaggtgtttttctttgtgatttcatcatctaagtgtggtggtttgttg 41431042  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    |||||||||||||||||||||||||| ||| |||| ||||| |||||||||| | ||||  |||||||||||||||||||||||||||||||    || |    
T  41431043 ttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggatgtca 41431142  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| ||  |||||||||||||| | |||||||||||||||||||||    
T  41431143 acgttgcagatccagagaccatggatattccgatgactttaattttatcatatatt 41431198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 38 - 360
Target Start/End: Complemental strand, 459509 - 459186
Alignment:
Q  38 taggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaa 137  Q
    |||||||| |||||||| |||||| |||| ||||||||||||||||||| ||||| |||||| |||   |||||||  ||||||||||||||| | ||||    
T  459509 taggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacctgaaatcacccctcttcatccttttctctctatttcattttaaa 459410  T
Q  138 taagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    |||| ||||| ||||||||| |||||||||| ||| |||||||| |||||| ||||| ||||| || ||||||||||||||| || ||||||||||||||    
T  459409 taagcgattttcacatagatataggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgatttt 459310  T
Q  236 ccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattcc 335  Q
    |||| || || |||||||||| |||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||| | ||| | |||| |    
T  459309 ccgtcttgttgcggtgttcatttgattcatattgaaagatcgattatttaatcaaagatttaggcgtcaacgttgcagatccggatg-cataggtatttc 459211  T
Q  336 ggtcactttaattttatcatatatt 360  Q
     |||| |||||||||||||||||||    
T  459210 agtcattttaattttatcatatatt 459186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 27476991 - 27477318
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||| ||||||||||||||||||  |||| |   |||| || |||||||||||||||| ||||| |||||| |||   |||||||| ||||||| ||||    
T  27476991 tttctgtctctaggttttttcttcttgattttctattgagggatggttttgggtcaattattgacatgaaatcacccctcttcatctttttctctatatt 27477090  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||      |||||||||||||| || ||||||||||||| ||    
T  27477091 tcaatctaaataagtaattttcacatagatctagattttttctttgtgatttcatcatct------ggtggtttgttgtttgtagtcttgtgcggcgctg 27477184  T
Q  227 tttgattttccgtattctta-cggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaag-cc 324  Q
    ||||||||||||| |||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||  || | |||||||||||| |||||| ||    
T  27477185 tttgattttccgtcttctttgcggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcatcaacgttgcagat-cggaagacc 27477282  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    || |||||| ||||||||||||||||||||||||||    
T  27477283 atagatatttcggtcactttaattttatcatatatt 27477318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 27949300 - 27949596
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt 166  Q
    ||||| ||||||| ||||||||||| |||||| ||   | ||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  27949300 gggtgattttgggacaattcttgacctgaaatcacacta-ttcatccttttcgctctgtttcaatctaaataagtgattttcacatagatctaggttttt 27949398  T
Q  167 tctt----tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgatt 262  Q
    | ||    || ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||| || ||||||| |||||    
T  27949399 ttttctattgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgatt 27949498  T
Q  263 catattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| |||||||| |||||||||||||||||||  |||| ||||||||||||||  | |||||||||||||| ||||||||||||||||||||||||    
T  27949499 catatcgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccagtcactttaattttatcatatatt 27949596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 71 - 360
Target Start/End: Original strand, 4228011 - 4228293
Alignment:
Q  71 tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--tt 167  Q
    |||||||||||||||||||||| |||||| ||  | |||||| | ||| ||| ||||||||| |||||||||||||| |||||||||||| |||||  ||    
T  4228011 tggttttgggtcaattcttgacctgaaatcacacatcttcatatttttatctttatttcaatataaataagtgatttacacatagatctatgtttttttt 4228110  T
Q  168 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatat 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||        
T  4228111 ctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattc---- 4228206  T
Q  268 tgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaa-ttttatcatatatt 360  Q
        |||||||||||||||||||||||||  ||   ||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  4228207 ----agatcgattattcaatcaaagatttaggc---aacgttgcagatccggaggtcatggatattccgatcactttaatttttatcatatatt 4228293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 17319139 - 17319490
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||| |||| |  | ||| |||||||||||||| ||||| || || |||  ||| || ||| |||||||||||| ||||| |||||| | |     
T  17319139 ctctccaacaagacggctctagttttttctctctaggttttctcttcgagttttttcaatga-ggatggatttgggtcaatttttgacctgaaatcatcc 17319237  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
      | |||| | ||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||| |||||    
T  17319238 ctcctcattt-tttctatctatttcaatctaaataactattttcacatagatctaggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttg 17319336  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatc-aaagattttagcgtt 303  Q
    ||| ||||||||||| |||||| |||||||||||| || || |||||||||| ||| |||||||| |||||||||||||||||| |||||||| |||||     
T  17319337 ttcttcgtcttgtgcagcgttg-ttgattttccgtcttgttgcggtgttcatttgactcatattg-aagatcgattattcaatcaaaagatttgagcgtc 17319434  T
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  17319435 aacgttgcagatccgaaag-catgggtattccggtcactttaattttatcatatatt 17319490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 40626272 - 40626066
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||| |||||||| |||||||  |||||  |||| ||||| ||||||||| ||||||||| |||||| |||   |||| ||| ||||||||||||    
T  40626272 tttctctctttaggttttctcttccattttcttaattgaggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctctctatt 40626173  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40626172 tcaatctaaataagggattttcacatagatctacgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttg 40626073  T
Q  227 tttgatt 233  Q
    |||||||    
T  40626072 tttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 32680827 - 32680640
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctat 126  Q
    ||||||||||||||||||| |||||| | |||||| |||  |||||||||| |||| ||||||||| |||||| ||  | |||||||| |||||||||||    
T  32680827 atttctctctctaggttttctcttcccgtttcttcattgg-gggtggttttcggtcgattcttgacctgaaatcactcatcttcatctttttctctctat 32680729  T
Q  127 ttcaatctaaataagtga-tttcacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 212  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  32680728 ttcaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 360
Target Start/End: Complemental strand, 39642076 - 39641770
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    ||||||||||| | |||| ||||| |||||| ||||| |||||| ||  | |||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  39642076 ttcttcgttgaggagtggctttggatcaatttttgacctgaaatcacttatcttcatctttttctctctatttcaatttaaataaatgattttcacatag 39641977  T
Q  155 atctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    |||||||||||||  ||| ||||||||||||||| | ||| |||||   ||||||||| ||||||||| | ||||||||||| |||| || || |||| |    
T  39641976 atctaggttttttttcttcgtgatttcatcatctgaatgttgtggtagtttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtat 39641877  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||| | ||||||||||||||||| ||||||||||| || ||||  || | ||||||||||||||||| || | |  |||| | |||||||| |||||||    
T  39641876 tcatttaattcatattgaaagatcaattattcaatccaaaatttgggcatcaacgttgcagatccggaggc-acgagtatttcagtcacttttattttat 39641778  T
Q  353 catatatt 360  Q
    ||||||||    
T  39641777 catatatt 39641770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 41713033 - 41712821
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||| |||||| |||  | ||||||| |||||||||| |||| ||  |||||| |||| |||||||||||||| |||||||||| |||||| |||     
T  41713033 ctctccaataagccgaccctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggttaattcttgacgtgaaatcaccc 41712934  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctagg-ttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
    |  ||||||  ||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  41712933 attttcatcattttctctctattttaatctaaataagtgattttcacatagatttaggtttttttctctgtgatttcctcatctaagtgtggtggtttgt 41712834  T
Q  203 tgttcgtcgtctt 215  Q
    |||||||||||||    
T  41712833 tgttcgtcgtctt 41712821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 8308037 - 8308339
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttct--ctctatttcaatctaaataagtgattt-cacat 152  Q
    |||||| ||||  ||||||||||| |||| | |||||||||||||| |   |||||||| ||| |  ||||| ||||||||||||  ||||||| |||||    
T  8308037 ttcttcattgaatggtggttttggatcaacttttgacttgaaataatccttcttcatctttttttttctctaattcaatctaaat--gtgattttcacat 8308134  T
Q  153 agatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    |||||||||||||||||| |||||||| |||||| | ||||| |  | ||||||||||||||||||| |||||||||||||| | ||||| || | || |    
T  8308135 agatctaggttttttcttcgtgatttcgtcatctgactgtggcgcgt-gttgttcgtcgtcttgtgcagcgttgtttgattt-ctgtattgttgcagttt 8308232  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||| |||||||||||||||||||||||||||||||||||| ||   ||| ||||||||||||||||| | |||   ||||||  ||||||||| |||||    
T  8308233 tcatttgattcatattgaaagatcgattattcaatcaaagaattggacgtcaacgttgcagatccggatg-cataactattccaatcactttaactttat 8308331  T
Q  353 catatatt 360  Q
    ||||||||    
T  8308332 catatatt 8308339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 31580686 - 31580563
Alignment:
Q  174 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||| ||||| ||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaag 31580587  T
Q  274 atcgattattcaatcaaagatttt 297  Q
    |||||||||| |||||||||||||    
T  31580586 atcgattattaaatcaaagatttt 31580563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 116 - 360
Target Start/End: Complemental strand, 37614279 - 37614037
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatcta-agtgtggtggtttgttgttcgtcgtc 213  Q
    |||||||||||||||  ||||||||||||||| || |||||||||  ||| | ||| ||| |||| | ||||  ||||||||| | |||||||| |||||    
T  37614279 tttctctctatttca--ctaaataagtgattttcatatagatctaaatttgt-cttcgtggtttcgtaatcttgagtgtggtgatgtgttgttcttcgtc 37614183  T
Q  214 ttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcag 313  Q
    ||||||| |||||||||||||||||| || || |||||||||| |||||||||||||||||| ||||||||||||||| ||||| | || ||||||||||    
T  37614182 ttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattcaatcaaatatttttgtgtcaacgttgcag 37614083  T
Q  314 atccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||| || ||||  ||||||  |||||||||||||||||||||||    
T  37614082 at-cgggagacatgagtattccaatcactttaattttatcatatatt 37614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 297
Target Start/End: Complemental strand, 9374780 - 9374530
Alignment:
Q  42 ttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataag 141  Q
    |||| ||||| || |||||| |||| || |||||||||||||||| ||||| |||||| | ||  |||||||| ||||| |||||||      |||||||    
T  9374780 ttttctcttctagtttcttcattgagggatggttttgggtcaatttttgacatgaaatcaacattcttcatctttttctttctattt------aaataag 9374687  T
Q  142 tgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgta 240  Q
     ||||| |||||| ||||| | |||||||| |||||||| |||||| | ||||||||| ||||||||||| ||||||||| | ||||||| ||||||||     
T  9374686 ggattttcacataaatctaagatttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtc 9374587  T
Q  241 ttcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttt 297  Q
    || ||  ||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  9374586 ttgttgtggtgttcatttgattcattttgaaagaacgattattcaatcaaagatttt 9374530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 352
Target Start/End: Complemental strand, 32197960 - 32197715
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttca-catagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| ||||||| ||||||||| ||||||| ||||||   |||| || |||||||||||||||||||||| ||||||||||||||| || |||||     
T  32197960 cttcatctttttctctttatttcaatataaataaatgatttttgcataaatttaggttttttctttgtgatttcgtcatctaagtgtggtagtgtgttgc 32197861  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
     | |||||||| ||||| ||||||||||| | || || || |||||||||| ||||||||||| ||| || || |||| ||||||| ||||  |||| ||    
T  32197860 ccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatattaaaatattgactatttaatcaaatatttgggcgtcaa 32197761  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
     |||||||||||||| | ||||| ||||| ||||||| |||||||||    
T  32197760 tgttgcagatccggatg-catggttattctggtcactctaattttat 32197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 32679173 - 32679021
Alignment:
Q  208 gtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacg 307  Q
    ||||||||||| ||||||||||| ||| | || ||||| || ||||||| | |||| ||||||||||||||||||||||||||||||||   ||| ||||    
T  32679173 gtcgtcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacg 32679074  T
Q  308 ttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  32679073 ttgcagatccggaggccatagatattccggtgactttaattttatcatatatt 32679021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 224 - 360
Target Start/End: Complemental strand, 84227 - 84092
Alignment:
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagc 323  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||   ||| ||||||||||||||||| |     
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgt 84129  T
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| ||||||||||||||||||||||    
T  84128 catggatattccggccactttaattttatcatatatt 84092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 40626070 - 40625976
Alignment:
Q  258 tgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40626070 tgattcatattgaaagatcgattattcaatcaaagatttgatcgtcaacgttgcagatccggcggccatggatattccggtcactttaattttat 40625976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 33229130 - 33229051
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||  |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  33229130 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatt 33229051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 31581885 - 31581808
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatca 183  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  31581885 cttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagtttttttctttttgatttcatca 31581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 360
Target Start/End: Complemental strand, 38575481 - 38575396
Alignment:
Q  275 tcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  38575481 tcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 38575396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 38293461 - 38293679
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggt-----tttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
    |||||||  ||||| | |||||||||| |||||||||||||||||||||||||| |     |||||||| |||||||| || |   ||||  ||| | ||    
T  38293461 cttcatcattttctatgtatttcaatcaaaataagtgatttcacatagatctagttctttttttttcttcgtgatttcttcgtacgagtgcagtgttatg 38293560  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||| | ||||||||||| | |||| || || |  ||||||| || || ||||| |||||| |||| ||||||||| ||||  ||||    
T  38293561 ttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggtttatattaaaagattgattgttcaatcaatgattcgagcg 38293660  T
Q  302 ttaacgttgcagatccgga 320  Q
    | ||||||| |||||||||    
T  38293661 tcaacgttgtagatccgga 38293679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 41712785 - 41712700
Alignment:
Q  274 atcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| |||||||||| ||||| |||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||    
T  41712785 atcgattattca-tcaaagatttgagcgtcaacgttgcagatacggaggccatgaatattccggtcattttaattttatcatatatt 41712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 42949578 - 42949691
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctcttt-ctctctatttcaatctaaataagtga-tttcacata 153  Q
    ||||||||||| ||||| ||||  || ||||||||||||||||| |||   |||||||| ||| |||| ||||||||||||||||||||| |||||||||    
T  42949578 ttcttcgttgaggggtgattttatgttaattcttgacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtgattttcacata 42949677  T
Q  154 gatctaggtttttt 167  Q
    ||||||||||||||    
T  42949678 gatctaggtttttt 42949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 44881813 - 44881657
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    ||||||||||| ||||||||||| || ||| |||||  || |||||||  ||||||| ||||||||||| ||||||   ||||||||||||  ||||       
T  44881813 tgttgttcgtcatcttgtgcggcattattttattttttgtcttcttacaatgttcatttgattcatattaaaagattagttattcaatcaataatttgca 44881714  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    | ||||| |||||||||||| || ||||  |||| |||||||||||||||||||||||    
T  44881713 cattaacattgcagatccgg-agacatgagtatttcggtcactttaattttatcatat 44881657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 12648052 - 12647990
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||| |||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  12648052 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 12647990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 211 - 357
Target Start/End: Original strand, 18113890 - 18114035
Alignment:
Q  211 gtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttg 310  Q
    ||||||||||||||||||||||||||||| || || ||||||| || || |||||||||||| |||  ||||||||| || |||||    || |||||||    
T  18113890 gtcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcagttattcaataaatgatttggatgtcaacgttg 18113989  T
Q  311 cagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||  |||  || |||||| || ||| ||||||||||||||||    
T  18113990 cagatcc-aaagatatcgatatttcgatcaatttaattttatcatat 18114035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 33229257 - 33229129
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||| |||||||||||||  | || ||||||||||||||| |||| | | |||||| |||| ||||||||||||||||||| ||||  | |||| |||    
T  33229257 cctctcaaacaagccggccctagtttcctctctctaggttttctcttactgtttcttcattgaagggtggttttgggtcaattattgagctaaaatcacc 33229158  T
Q  104 aaacttcatctctttctctctatttcaat 132  Q
       |||||||| ||| |||||||||||||    
T  33229157 tctcttcatctttttttctctatttcaat 33229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 255
Target Start/End: Original strand, 10248077 - 10248211
Alignment:
Q  121 ctctatttcaatctaaataagtgatttc-acatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    |||||||||||||||| ||||||||||| | ||||||||||| |||||||| |||| ||| |||||| ||||||| ||| ||||||| | |||||| |      
T  10248077 ctctatttcaatctaattaagtgatttctatatagatctagg-tttttcttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttatat 10248175  T
Q  220 ggcgttgtttgattttccgtattcttacggtgttca 255  Q
    |||||| ||| |||| |||| || || |||||||||    
T  10248176 ggcgtttttttatttcccgttttattgcggtgttca 10248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 18763431 - 18763492
Alignment:
Q  164 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||| |||||||||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  18763431 ttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 18763492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 34600332 - 34600384
Alignment:
Q  308 ttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  34600332 ttgcagattcggaggccatgaatattccggtcactttaattttatcatatatt 34600384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 39310984 - 39310928
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||    
T  39310984 tttgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgcagcgtt 39310928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 36323790 - 36323981
Alignment:
Q  123 ctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 221  Q
    ||||| || |||||||||||||||| ||||||||| |||||||||||| ||||||||| || | | |||| ||   | ||||||| || |||||||||||    
T  36323790 ctattacattctaaataagtgattttcacatagatttaggttttttctctgtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcgg 36323889  T
Q  222 cgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatc 316  Q
    |   |||||||||  ||| || ||    ||||||| || ||| ||||||||||||  |||||||||||| | |||   ||| |||||||||||||    
T  36323890 c---gtttgatttctcgtcttgttgaaatgttcatttggttcctattgaaagatctgttattcaatcaatggtttggacgtcaacgttgcagatc 36323981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 4904277 - 4904171
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    ||||||||||| || || |||||||| | | ||||||||||||||||||||| |   ||||||||||  || || || |||||||| | || ||||||||    
T  4904277 tttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgtgcgac---gtttgattttgtgtcttgttgcggtgttcgtttggttcatatt 4904181  T
Q  269 gaaagatcga 278  Q
    ||||||||||    
T  4904180 gaaagatcga 4904171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 10237398 - 10237290
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || ||| |||| |  | | |||||||||||||||||||| |||    
T  10237398 tttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcg 10237301  T
Q  224 ttgtttgattt 234  Q
    || ||||||||    
T  10237300 ttctttgattt 10237290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 357
Target Start/End: Original strand, 13141457 - 13141651
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    ||||||||| ||||||||||| ||||| ||||    | ||||||||||||| ||||||   |||||||||||||  || || ||  ||| ||||| || |    
T  13141457 ttttttcttcgtgatttcatcgtctaaatgtgactttgtgttgttcgtcgttttgtgcattgttgtttgattttatgtcttgttttggtattcatttggt 13141556  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    || |||| ||||||||| ||||| ||||| |||||   ||| ||||||| |||| | |||| |||| ||||||| | |||||| | ||||||||||    
T  13141557 tcctatttaaagatcgactattcgatcaatgatttggacgtcaacgttgtagattctgaag-catgaatattccagccacttttagtttatcatat 13141651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 36943260 - 36943197
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||| ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  36943260 ttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 36943197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 1421644 - 1421700
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| |||| | |||||||||||||||||||| |||||    
T  1421644 tttgtgatttcgtcgtctaagtgcggtgttatgttgttcgtcgtcttgtgcagcgtt 1421700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7678005 - 7677949
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  7678005 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 32448722 - 32448647
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||||| |||||||||||||  | | || || |||||||| | || ||||||||||||||||    
T  32448722 tgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgt-tggttcatattgaaagatc 32448647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 11189755 - 11189620
Alignment:
Q  152 tagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtg 251  Q
    ||||| ||||||||||||| ||||||||||  |||| | |||  |   |||| | ||||||||||||| |  |||||||||||  ||| || ||  ||||    
T  11189755 tagatttaggttttttcttcgtgatttcattgtctatgagtgacgcaatgttatacgtcgtcttgtgcagtattgtttgatttctcgtcttgttgtggtg 11189656  T
Q  252 ttcatctgattcatattgaaagatcgattattcaat 287  Q
    |||||||||||  |||||||||||| | ||||||||    
T  11189655 ttcatctgattgttattgaaagatcaactattcaat 11189620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 18694972 - 18695003
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt 147  Q
    ||||||||||||||||||||||||||||||||    
T  18694972 tttctctctatttcaatctaaataagtgattt 18695003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 357
Target Start/End: Original strand, 18695066 - 18695220
Alignment:
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||||| | || |||||||||| || ||  |  ||||||||| | |||  |||||||||||    || |||||||| |||||   ||    
T  18695066 ttgttcgtcgtcttgtgcgacattatttgattttcagttttgatgtggtgttcatttaatttctattgaaagattaggtactcaatcaatgatttggtcg 18695165  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    | |||||||||||||  | ||||||| ||||| ||  |||||||||||||||||||    
T  18695166 tcaacgttgcagatctag-agccatgaatatttcgaccactttaattttatcatat 18695220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 19028923 - 19028849
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcata 356  Q
    |||||||||| ||||| ||||| ||||||||| |||| ||||| ||||||||| |||| ||||  |||||||||||    
T  19028923 attcaatcaatgatttgagcgtcaacgttgcaaatccagaagc-atggatatttcggtaacttagattttatcata 19028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 29574732 - 29574657
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||||||||||||||||||| |||||||||||  | | || || | |||||  | ||||||||||||||||||    
T  29574732 tgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagat 29574657  T

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Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 31581943 - 31581888
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattc 87  Q
    |||||||||||||| |||| | | |||||| |||| ||||||||||||||||||||    
T  31581943 tctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaattc 31581888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 6358977 - 6358943
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||| ||||||||||||||    
T  6358977 tgttgttcgtcgtcttgtgcagcgttgtttgattt 6358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 6436579 - 6436679
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaa 271  Q
    ||||||||||  ||| ||||||||| | ||| ||||||||||||||||| ||||   ||||||| | | || ||||||||||| |||| |||||| ||||    
T  6436579 gtgatttcatggtctgagtgtggtgttgtgt-gttcgtcgtcttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaa 6436674  T
Q  272 agatc 276  Q
    |||||    
T  6436675 agatc 6436679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 7646443 - 7646497
Alignment:
Q  171 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  7646443 tgtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtt 7646497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 17261606 - 17261636
Alignment:
Q  260 attcatattgaaagatcgattattcaatcaa 290  Q
    |||||||||||||||||||||||||||||||    
T  17261606 attcatattgaaagatcgattattcaatcaa 17261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 34128813 - 34128755
Alignment:
Q  175 atttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    ||||| || ||| |||| |||| | ||||||||||||||||||||| ||||||||||||    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgatt 34128755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 37416706 - 37416740
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||||||||||||| |||||||||||||    
T  37416706 tgttgttcgtcgtcttgtgcgacgttgtttgattt 37416740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 4264472 - 4264544
Alignment:
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||||||||||||||||   ||||||||||  ||| || || |||||||||| || ||| ||||||||||||    
T  4264472 gttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 35220293 - 35220397
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    ||||||||||| || |||||||| ||   | |||||||| ||||||||||||||   |||||||||| ||| || | ||||||||||| |  ||| ||||    
T  35220293 tttgtgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtgcggc---gtttgattttgcgttttgtcacggtgttcatttagttcctatt 35220389  T
Q  269 gaaagatc 276  Q
    ||||||||    
T  35220390 gaaagatc 35220397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 37876738 - 37876685
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    ||||||||||  || |||||||| || | |||||||||||||||||||||||||    
T  37876738 tttgtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggc 37876685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 43397248 - 43397195
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||| || ||||||||||| | | ||||||||||||||||||| ||||||    
T  43397248 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt 43397195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 5428000 - 5427944
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || || ||||| || | ||||||||||||||||||||| ||||||    
T  5428000 tttgtgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtcttgtgtggcgtt 5427944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 7448215 - 7448271
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| |  |||||||| || | | ||||||||||||||||||||||||||    
T  7448215 tttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7448271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 14416169 - 14416201
Alignment:
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||||||||| |||||||||||||||    
T  14416169 ttgttcgtcgtcttgtgtggcgttgtttgattt 14416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 37994275 - 37994347
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    ||||||||||| || ||| |||| |||||||||||| | | || || | |||||||| |||||||||||||||    
T  37994275 tgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 37994347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 38445134 - 38445190
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||  | | | ||||||||||||||||||||||||||    
T  38445134 tttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtt 38445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 25162242 - 25162599
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||| ||||| |  | |||||||||||||||||| |||| ||| ||||||  ||| ||||||||||| |||||||||||| ||||||| |||    
T  25162242 cctctccaacaaaccggctctagttttctctctctaggttttctcttacagtttcttcactgaggggtggttttgtgtcaattcttgatttgaaatcacc 25162341  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25162342 catcttcatctttttctctctatttcaatctaaataagtgatttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgt 25162441  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||||||||||||||||| || | ||| | |||||||||| || |||||||||||||||||||||||||||||||||||| | |||    
T  25162442 tgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatcgattattcaatcaaagatttgaccgt 25162541  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  25162542 caacgttgcagatccggaggtaatggatattccggtcactttaattttatcatatatt 25162599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 360
Target Start/End: Original strand, 29503275 - 29503624
Alignment:
Q  12 acaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    ||||||||||||  | ||||||| |||| ||||| ||||| ||||| ||| | || ||| || ||||||||||||||||||| |||||| ||| | ||||    
T  29503275 acaagccggccctagttttctctttctaagttttctcttctagatttttcatcgagggggtgattttgggtcaattcttgacctgaaatcacccatcttc 29503374  T
Q  111 atctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 209  Q
    || | ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29503375 atatttttctctatatttcaatctaaataattgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 29503474  T
Q  210 cgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgtt 309  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||| ||||||    
T  29503475 cgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgtt 29503573  T
Q  310 gcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29503574 gcagatccggaggccatggatattccggtcactttaattttatcatatatt 29503624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 4178370 - 4178728
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | ||||||||||||||||||||||| | | |||||| |||| ||||||||||||||||||||||||| | |||| |||    
T  4178370 cctctccaacaagtcggccctagttttctctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcacc 4178469  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
     | |||||||| |||||||||||||||||||||||||||||||| || ||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  4178470 catcttcatctttttctctctatttcaatctaaataagtgattttcagataaatctagctttttttctttgtgatttcatcatctaagtgtggtggtttg 4178569  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    || ||| ||||||||||||||||||||| |||| |||| ||| | |||||||||| ||||| ||||||||||||| ||||||||| |||||||||  |||    
T  4178570 tttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatccattattcaaacaaagatttgggcg 4178669  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4178670 tcaacattgcagatccggaggccatggatattccggtcactttaattttatcatatatt 4178728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 46934449 - 46934805
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||| ||||||    |||||||||||||||||| ||||| |  |||||| |||| |||||||||| |||||||| ||||| |||||| |||     
T  46934449 ctctccaacaagtcggccctaattttctctctctaggttttctcttctactttcttcattgaggggtggtttttggtcaatttttgacctgaaatcaccc 46934548  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgtt 203  Q
      |||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  46934549 ctcttcatctttctctctctatttcaatctaaataagtgattttcacatagatccaggttttttcttgttgatttcatcatctaagtgtggtggtttgtt 46934648  T
Q  204 gttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtt 303  Q
    |||||||||||||||||| |||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||     
T  46934649 gttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgggcgtc 46934748  T
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| |||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  46934749 aacattgcagatccggagttcatggatattccggtcactttaattttatcatatatt 46934805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 49552468 - 49552135
Alignment:
Q  28 tttctctctctaggttttt-tcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctat 126  Q
    ||||||||| ||||||||| |||||| | |||||| |||| ||||||||||||||||||||||||| |||||| |||   |||||||  ||| |||||||    
T  49552468 tttctctctttaggtttttctcttcc-gtttcttcattgatgggtggttttgggtcaattcttgacctgaaatcacccctcttcatcattttttctctat 49552370  T
Q  127 ttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49552369 ttcaatctaaataagtgaatttcacattaatctaggttttttctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgtt 49552270  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    |||||||||  ||| ||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||    
T  49552269 gtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatcgattattcaatcaaagatttgagcatcaacgttgcagatccggaggcca 49552170  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| |||||| ||||||||||||||    
T  49552169 tggatattccggtgactttagttttatcatatatt 49552135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 39917641 - 39917309
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||||||||  ||| ||| ||||||  ||| | ||||||||||||||||||||||| |||||| | | | |||||| | |||||||||| |    
T  39917641 tttctctctctaggttttcccttacagtttcttcactgaggagtggttttgggtcaattcttgacctgaaatcatccatcttcatatttttctctctaat 39917542  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  39917541 tcaatctaaataagtgattttcacatagatctaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacgacgttg 39917442  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||||| || ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | |||    
T  39917441 tttgattttc-gtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccggaggtcat 39917343  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  39917342 ggatattccagtcactttaattttatcatatatt 39917309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 25631772 - 25631437
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| |   |||||| |||| ||||||||||||||||||| ||||| | |||| | |   || ||||| ||||||||||||    
T  25631772 tttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctctatt 25631673  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  25631672 tcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtgcggcgt 25631573  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    ||||| |||| |||| ||| | |||||||||| ||||| |||||||||||||||||||||||||||||||||  |||| ||||||| ||||||||| |||    
T  25631572 tgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgtagatccggatgcc 25631473  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  25631472 atggatattccggtcactttaattttatcatatatt 25631437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 32607273 - 32607632
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataac 102  Q
    ||||||||||||||||||||  | ||||||||||||| |||| |||| ||  |||||| |||| ||| |||||||||||||||||||||| ||||||| |    
T  32607273 cctctccaacaagccggccctagttttctctctctagattttctcttacaatttcttcattgagggggtggttttgggtcaattcttgacctgaaatacc 32607372  T
Q  103 caaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtt 199  Q
    |   |||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| ||    
T  32607373 cct-cttcatcattttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatt 32607471  T
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||| | |||||||||| |||||||||||||||||| |||| |||||||||||||||  |    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttggg 32607571  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||||||||||||| || ||| |||||||| |||||||||||| ||||||||||    
T  32607572 cgtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatt 32607632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 36905951 - 36906285
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  |||||| |||| || |||||||||||||||||||||| |||||| |||   |||||||| ||||||| ||||    
T  36905951 tttctctctctaggttttctcttacaatttcttcattgatggatggttttgggtcaattcttgacctgaaatcacccttcttcatctttttctctttatt 36906050  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||| |||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36906051 tcaatataaataagtgattttcacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgtt 36906150  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||||||| |||| ||| |   |||||||| ||||||||||||||||||| ||| |||||||||||||||  |||| |||||||||| |||||| || |    
T  36906151 gtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagttccggaggcaa 36906250  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    | |||||||| ||||||||||||| ||||||||||    
T  36906251 tagatattccagtcactttaatttcatcatatatt 36906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 44907667 - 44907310
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||| |||||| | | |||||||||||||||||| || | ||  |||||| |||| ||||||||||||||||||||||||| |||||| |||    
T  44907667 cctctccaacaaaccggccta-gttttctctctctaggttttctcctacaatttcttctttgaggggtggttttgggtcaattcttgacctgaaatcacc 44907569  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||  |||||| |||||||||||||||||||||| |||    
T  44907568 cctcttcatctttttctctttatttcaatctaaacaagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgattt 44907469  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||||||||||||| ||||||||||||| |  | ||| | |||||||||| | ||||||||||||||||||||| |||||||||| ||||  ||    
T  44907468 gttgttcgtcgtcttgtgcg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttcaatcaaatatttgggc 44907370  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||||||| || | | ||||||||||||||||||||| ||||||||||    
T  44907369 gtcaacgttgcagatccggaggcaacgaatattccggtcactttaatttcatcatatatt 44907310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 12115899 - 12116261
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| |||| |  | |||||||||||||||||| | || ||  |||||| |||| ||||||||||| ||||||||||||| |||||| | |    
T  12115899 cctctccaacaagtcggctctagttttctctctctaggttttcttttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcatc 12115998  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt----ctttgtgatttcatcatctaagtgtggtggt 198  Q
       |||||||| || |||| |||||||||||||||||||||||| |||| |||||||||||||||    |||||| ||||||| |||||||||||||| |    
T  12115999 tctcttcatcttttcctctttatttcaatctaaataagtgattttcacaaagatctaggttttttttttctttgtaatttcattatctaagtgtggtgat 12116098  T
Q  199 tt-gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttt 297  Q
    || ||||||||| |||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||     
T  12116099 tttgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttg 12116198  T
Q  298 agcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| ||||||||||||||||| || ||||||||||  ||||||||||||| ||||||||||    
T  12116199 agcgtcaacgttgcagatccggaggcaatggatattctagtcactttaatttcatcatatatt 12116261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 51202518 - 51202165
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| |||||   | ||| ||||| |||||||| |||| ||| |||||  |||| ||||| ||||||||||||||||||| |||||| |||    
T  51202518 cctctccaacaagtcggccttagttttttctctttaggttttctcttacagtttctttattgaggggtgattttgggtcaattcttgacctgaaatcacc 51202419  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggtttttt---ctttgtgatttcatcatctaagtgtggtggttt 200  Q
     | |||||| | |||||||||||||||||||||||      |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  51202418 catcttcatatttttctctctatttcaatctaaat------tttcacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggttt 51202325  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||| ||||||||||||||||||||||||||| || |  || | |||||||||| |||||||||||||||||||  | ||||||||||||||||  ||    
T  51202324 gttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgattcatattgaaagatcagtaattcaatcaaagatttgggc 51202225  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||| ||||||| || ||| |||| |||||||||||||||||||||||||||    
T  51202224 gtcaacgttgcaaatccggaggcgatgaatatcccggtcactttaattttatcatatatt 51202165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 38855305 - 38854947
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||| |||  | |||||||||||||||||| |||| |   |||||| |||| |||||||||||||||| ||||||||   |||| |||    
T  38855305 cctctccaacaagccgaccctagttttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtca-ttcttgaccgaaaatcacc 38855207  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  38855206 cctcttcatctttttctctctatatcaatctaaataagtgattttcacatagatctagattttttttctttgtgatttcatcatctaagtgtgatggttt 38855107  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    ||||||||| |||||||| |||||||||| || | ||||  || | |||||||||| ||||| ||||||||||||||||||||||||| || ||||  ||    
T  38855106 gttgttcgttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattcaatcgaatatttgggc 38855007  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  38855006 gtcaacgttgcaaatccggaggccattgatattccgggcactttaattttatcatatatt 38854947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 71 - 357
Target Start/End: Complemental strand, 50611619 - 50611332
Alignment:
Q  71 tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-c 168  Q
    |||||||||||||||| ||||| | |||| |||   |||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||||||| |    
T  50611619 tggttttgggtcaattattgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttcatatagatctaggtttttttc 50611520  T
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| |||| |||||||||  || | |||||||||| ||||| |||||    
T  50611519 tttgtgatttcatcatctaagtgtgatggtttattgttcgtcgtcttatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatatt 50611421  T
Q  269 gaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||||||||||||| |||||||  |||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  50611420 gaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatattcgggtcacttaaattttatcatat 50611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 63 - 360
Target Start/End: Original strand, 14464372 - 14464673
Alignment:
Q  63 ttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctagg 161  Q
    |||| ||||||||||||||||||||||||| |||||| |||    ||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |    
T  14464372 ttgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtgattttcacatagatctaag 14464471  T
Q  162 tttt---ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatct 258  Q
    ||||   ||||||||||||||||| ||||||||||||| |||||  ||| |||| | |||||||||||||| |||| |||| ||| | |||||||||| |    
T  14464472 tttttttttctttgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgttcattt 14464571  T
Q  259 gattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatata 358  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| || |||||| |||| |||||||||||||| |||||||    
T  14464572 gattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatgttccagtcactttaattttgtcatata 14464671  T
Q  359 tt 360  Q
    ||    
T  14464672 tt 14464673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 17237672 - 17237968
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt- 165  Q
    |||||||| | |||||||||||||| | |||| |   | |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||     
T  17237672 gggtggttctaggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggttttt 17237771  T
Q  166 --ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattc 263  Q
      ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |   || |||   ||||||| || ||||||    
T  17237772 ttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattc 17237871  T
Q  264 atattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| ||| |||||||||||||||||||||||  |||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  17237872 atattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatt 17237968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 55 - 360
Target Start/End: Complemental strand, 35499420 - 35499109
Alignment:
Q  55 attcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctctttctctctatttcaatctaaataagtgattt-cacat 152  Q
    ||||||| |||| |||||||||| |||||||| || || |||||| |||    |||||||| ||||||| |||||||||||||||||||||||| |||||    
T  35499420 attcttcattgaggggtggtttttggtcaattttttacctgaaatcaccccctcttcatctttttctctttatttcaatctaaataagtgattttcacat 35499321  T
Q  153 agatctaggtttttt----ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacg 248  Q
    |||||||||||||||    |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||  | ||    
T  35499320 agatctaggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcg 35499221  T
Q  249 gtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaatt 348  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| ||||| |||||||  | |||||||||||| |||||||||||    
T  35499220 gtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgttaacattgcaaatccggagacaatggatattccgatcactttaatt 35499121  T
Q  349 ttatcatatatt 360  Q
    | ||||||||||    
T  35499120 tcatcatatatt 35499109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 56 - 356
Target Start/End: Complemental strand, 38440794 - 38440496
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| ||||  |||||||||| ||||||||||||| |||||| ||    ||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  38440794 ttcttcattgaatggtggttttgagtcaattcttgacctgaaatcactcctctttatctttttctctctatttcaatctaaataagtgattttcacatag 38440695  T
Q  155 atctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttc 254  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |  |||   |||||||||| ||| ||| | |  |||||    
T  38440694 atctaggttttttctttttgatttcatgatcaaagtgtggtggtttgttgttcgtcgtcttatatggc---gtttgatttttcgtcttcgtgcaatgttc 38440598  T
Q  255 atctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatca 354  Q
    || |||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||| ||| |||||| |||||||| ||||||||||||| |||    
T  38440597 atttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacattgcagatctggaggccatgaatattccgatcactttaattttgtca 38440498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 42719438 - 42719680
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    ||||||||||||||||| |||||||||||||| ||  |||||||||||||||    ||||| ||||||||||||||||||||||||||||||||||||||    
T  42719438 tttctctctatttcaatttaaataagtgattttcatgtagatctaggttttta---tgtgagttcatcatctaagtgtggtggtttgttgttcgtcgtct 42719534  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    ||||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||     || |||||||||||    
T  42719535 tgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattcggaggtcaacgttgcaga 42719634  T
Q  315 tccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||| | | || ||||||||||||||||||||||||||||||||    
T  42719635 ttcggaggtcgtgaatattccggtcactttaattttatcatatatt 42719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 22802891 - 22803193
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggtttt 165  Q
    ||||| ||||||||||||| ||||| |||||| ||    |||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  22802891 gggtgattttgggtcaatttttgacatgaaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggtttt 22802990  T
Q  166 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
     ||| |||| |||| |||| | ||||||| |||||||||||||||||||| ||||||||||||||||||  |||||  || |||||||||| ||||||||    
T  22802991 ctctatgtgctttcgtcatttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcat 22803090  T
Q  266 attgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc--------ggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||        ||||| ||||| ||||||| |||||||||||||||||| |    
T  22803091 attgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggcatggaagacatgggtattccgatcactttaattttatcatgt 22803190  T
Q  358 att 360  Q
    |||    
T  22803191 att 22803193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 132 - 360
Target Start/End: Complemental strand, 30648860 - 30648630
Alignment:
Q  132 tctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30648860 tctaaataagtgactttcacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgttt 30648761  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    | ||| || | ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||   ||| ||||||||| ||||||  |||||| |    
T  30648760 gctttcccatcttcttgcggtgttcattttattcatattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcaaatccggcggccatgaa 30648661  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||| |||| |||||||||||||||||||||    
T  30648660 tatttcggtaactttaattttatcatatatt 30648630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 4 - 234
Target Start/End: Original strand, 4172372 - 4172604
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | ||||||||||||| ||||||||| | | |||||| |||| |||||||||||||||||||||| || | |||| | |    
T  4172372 cctctccaacaagtcggccctagttttctctctctagattttttcttactgtttcttcattgaggggtggttttgggtcaattcttaacataaaatcatc 4172471  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctagg-ttttttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
     | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4172472 catcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttg 4172571  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    || ||||||||||||||||| ||||||| ||||    
T  4172572 tttttcgtcgtcttgtgcggtgttgtttcattt 4172604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 171 - 359
Target Start/End: Complemental strand, 3849019 - 3848831
Alignment:
Q  171 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattga 270  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | ||||| |||||||||| | |||| ||||||    
T  3849019 tgtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattga 3848920  T
Q  271 aagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatat 359  Q
    ||||||||||||||||||||||||||   ||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  3848919 aagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatat 3848831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 4 - 352
Target Start/End: Original strand, 25849627 - 25849964
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||  | ||| ||||||||||||||||||||||| |||||  |||| ||||||||||| ||||||| |||||||||||| |||    
T  25849627 cctctccaataagccggccctagtttt-tctctctaggttttttcttccagcttcttaattgaggggtggttttgagtcaatttttgacttgaaatcacc 25849725  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgat-ttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
        ||| ||| ||||| |||||||||||  | ||||||||| ||||||||||||||  |||||||||  | ||||| |      ||||||||||| |||    
T  25849726 cttattcgtctttttctttctatttcaattcagataagtgatgttcacatagatctaaattttttcttcataatttcgt------agtgtggtggtgtgt 25849819  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||    |||||||||| ||||||||| |||| |||| ||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  25849820 tgt----cgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgt 25849915  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
     |||||||||||||||| || |||| ||||||| |||||||||| |||||    
T  25849916 caacgttgcagatccgg-agacatgaatattccagtcactttaactttat 25849964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 360
Target Start/End: Original strand, 46178447 - 46178731
Alignment:
Q  69 ggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttt 166  Q
    ||||||||||||||||||  |||| |||||| | |   |||||||| |||||||||| ||||||||||||||||| |||  |||||||||||||||||||    
T  46178447 ggtggttttgggtcaatttatgacctgaaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttt 46178546  T
Q  167 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata 266  Q
    |||| |||||||| || ||  ||||||||||| | ||||||||| |||||||| | |||||||        ||||| || | |||||||| |||||||||    
T  46178547 tcttcgtgatttcgtcttccgagtgtggtggtgtattgttcgtcatcttgtgcagtgttgttt--------gtattgttgcagtgttcatttgattcata 46178638  T
Q  267 ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| || ||||||||||||||||| ||  |||| |||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||    
T  46178639 ttgaaatattgattattcaatcaaagaattgggcgtcaacgttgcagatccgg-aggcatgggtattccggtcacttttattttatcatatatt 46178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 162 - 360
Target Start/End: Complemental strand, 36734801 - 36734604
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    ||||||||| |||||||| ||||| || |||| |||| |||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgat 36734702  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| |||||||||||||||| ||||||||||||  |||| ||||||||||||| || || ||||  |||| |||| |||||||||||||||||||||    
T  36734701 tcataatgaaagatcgattattgaatcaaagatttgggcgtcaacgttgcagatctgg-aggcatgagtatttcggttactttaattttatcatatatt 36734604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 120 - 358
Target Start/End: Original strand, 31794001 - 31794231
Alignment:
Q  120 tctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    |||||||||||||||||||||||||||| |||||||||||        || | |||||||  |||||| ||||| ||||| ||||||||||||| |||||    
T  31794001 tctctatttcaatctaaataagtgattttcacatagatct--------tcctcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtg 31794092  T
Q  219 cggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccg 318  Q
    ||||||||||||||||||  | || || |||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||| ||    
T  31794093 cggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgcagattcg 31794192  T
Q  319 gaagccatggatattccggtcactttaattttatcatata 358  Q
    | || ||||  ||||||||||| |||||||||||||||||    
T  31794193 g-aggcatgagtattccggtcagtttaattttatcatata 31794231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 38 - 233
Target Start/End: Original strand, 2342332 - 2342528
Alignment:
Q  38 taggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaa 137  Q
    |||||||| |||| ||| ||||||||||| |||||||||||||||||||||  || ||||  ||||   |||||||| ||||||||||||||||||||||    
T  2342332 taggttttctcttacagtttcttcgttgaggggtggttttgggtcaattctaaacctgaatcaaccct-cttcatctttttctctctatttcaatctaaa 2342430  T
Q  138 taagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    |||||||||| |||||| |||||  |||| |||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  2342431 taagtgattttcacatatatctatatttttttctttgtgatttcatcatctaagtgtggtggtttgttattcgttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 320
Target Start/End: Original strand, 37169067 - 37169353
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||||||    || |||||| |||| ||||| |||||| |||||| || || |||||| |||   ||||| || |||||||||| |||||    
T  37169067 tctctctaggttttttca---agtttcttcattgaggggtgattttggatcaattttttacctgaaatcacctctcttcacctttttctctctaattcaa 37169163  T
Q  132 tctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    | ||||||||||||||  ||||||||||||| |||||||||  ||||||| ||| |  |||||| |||| |||||| ||||||||||||| |||||||||    
T  37169164 tataaataagtgatttttcacatagatctagattttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtcgtcttgtgcagcgttgttt 37169263  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgga 320  Q
    ||||||||||||| || ||||| |||| |||||||||| | |||||| |||||||||| ||||| ||   ||| |||||||||||||||||    
T  37169264 gattttccgtattgttgcggtgctcatttgattcatatcg-aagatcaattattcaattaaagaattagacgtcaacgttgcagatccgga 37169353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 21487940 - 21488256
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacg-ggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctat 126  Q
    |||||||||||| ||||| ||||||| ||||||  |||| | ||  |||||  ||||||| ||||| |||||| ||||| |||||||| |||||||| ||    
T  21487940 tttctctctctaagttttctcttccatattctttattgaggaggaagttttctgtcaatttttgacctgaaatcaccaatcttcatctttttctctccat 21488039  T
Q  127 ttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||||||| |||||| ||||||||  |||                    |||||||||||||| ||||||| ||||||||||||||||||    
T  21488040 ttcaatctaaataagtgactttcacgtagatctaaattt--------------------ctaagtgtggtggtatgttgtttgtcgtcttgtgcggcgtt 21488119  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgga--agc 323  Q
    ||||||||| |||| ||||| ||||||| || ||||||||||||||| |||||||||||||||||||||||  |||| ||||||| ||||| |||  ||     
T  21488120 gtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgtagatctggaggagg 21488219  T
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
    ||||   ||||  ||||||||||||||||||||||||    
T  21488220 catgagcattctagtcactttaattttatcatatatt 21488256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 360
Target Start/End: Complemental strand, 6910802 - 6910623
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaa 271  Q
    ||||||||||||||||||||||||||| | || |||||||| |||||||  |||||||||||||||||  |      |||||||| ||||||||||||||    
T  6910802 gtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgattttccgttat------gtgttcatttgattcatattgaa 6910709  T
Q  272 agatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||| |||||| ||||| || |||| ||||  || || ||||  |||||| |||| |||||||||||||||||||    
T  6910708 agatcgattattcaatcatagatttgagcgtcaatgttgtagatatgg-agacatg--tattccagtcaatttaattttatcatatatt 6910623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 2342524 - 2342626
Alignment:
Q  258 tgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||| || |||| |  |||||||||||||||||||||||||||||||||    
T  2342524 tgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcaaattcggaggatatggatattccggtcactttaattttatcatat 2342623  T
Q  358 att 360  Q
    |||    
T  2342624 att 2342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 3850660 - 3850560
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttt 166  Q
    |||||||||||| |||||||||||| |||||| |||   |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3850660 gggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctaggttttt 3850561  T
Q  167 t 167  Q
    |    
T  3850560 t 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 21916555 - 21916636
Alignment:
Q  278 attattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21916555 attattcaatcaaa-atttgagcgtcaacgttgcagatccggaaaccatggatatttcggtcactttaattttatcatatatt 21916636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 47980914 - 47980708
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctct----ttctc 121  Q
    |||| ||| |||||||||| |||| ||| |||||| ||||  |||||||||||||||||| ||||| |||||| ||   | |||  |||||    |||      
T  47980914 atttttctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttttctctcaatttcaa 47980815  T
Q  122 tctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    || |||||||||||||||||||||||  |||||| |||||||| |||| || |||||||| ||||   | |||||||||||||||||| ||||||| |||    
T  47980814 tccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgc 47980715  T
Q  220 ggcgttg 226  Q
    |||||||    
T  47980714 ggcgttg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 47990201 - 47989995
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctct----ttctc 121  Q
    |||| ||| |||||||||| |||| ||| |||||| ||||  |||||||||||||||||| ||||| |||||| ||   | |||  |||||    |||      
T  47990201 atttttctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttttctctcaatttcaa 47990102  T
Q  122 tctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    || |||||||||||||||||||||||  |||||| |||||||| |||| || |||||||| ||||   | |||||||||||||||||| ||||||| |||    
T  47990101 tccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgc 47990002  T
Q  220 ggcgttg 226  Q
    |||||||    
T  47990001 ggcgttg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 47999488 - 47999282
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctct----ttctc 121  Q
    |||| ||| |||||||||| |||| ||| |||||| ||||  |||||||||||||||||| ||||| |||||| ||   | |||  |||||    |||      
T  47999488 atttttctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttttctctcaatttcaa 47999389  T
Q  122 tctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    || |||||||||||||||||||||||  |||||| |||||||| |||| || |||||||| ||||   | |||||||||||||||||| ||||||| |||    
T  47999388 tccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgc 47999289  T
Q  220 ggcgttg 226  Q
    |||||||    
T  47999288 ggcgttg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 48008775 - 48008569
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa-cttcatctct----ttctc 121  Q
    |||| ||| |||||||||| |||| ||| |||||| ||||  |||||||||||||||||| ||||| |||||| ||   | |||  |||||    |||      
T  48008775 atttttctgtctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatcactttatctttttctctcaatttcaa 48008676  T
Q  122 tctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    || |||||||||||||||||||||||  |||||| |||||||| |||| || |||||||| ||||   | |||||||||||||||||| ||||||| |||    
T  48008675 tccatttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgc 48008576  T
Q  220 ggcgttg 226  Q
    |||||||    
T  48008575 ggcgttg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 20465101 - 20464993
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatatt 268  Q
    |||||||||||||| |||||||| |||| | |||||||||||||||||| ||||   |||||||||| ||| || |  |||||||||| | | || ||||    
T  20465101 tttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggc---gtttgattttgcgtcttgtcgcggtgttcatttaaatcctatt 20465005  T
Q  269 gaaagatcgatt 280  Q
    ||||||||||||    
T  20465004 gaaagatcgatt 20464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 4396437 - 4396362
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||| ||||||||||| |||||||||||||||| ||  || || |||||||| | ||||||||||||||||||    
T  4396437 tgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagat 4396362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 30829892 - 30829995
Alignment:
Q  116 tttctctctatttcaatctaaataagtgatttc-acatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    |||||||||||||||||| |||| || |||||  ||||||||||||||| |||| | ||||||||||||||| ||||||  | | ||||||| ||||| |    
T  30829892 tttctctctatttcaatccaaatgagggattttgacatagatctaggttgtttcatcgtgatttcatcatctgagtgtgacgttgtgttgtttgtcgttt 30829991  T
Q  215 tgtg 218  Q
    ||||    
T  30829992 tgtg 30829995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 315
Target Start/End: Complemental strand, 20911731 - 20911614
Alignment:
Q  198 tttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttt 297  Q
    ||||||||||||||||||||    |||||||||||||||| | || || |||| |  || | ||||||| |||||||| || ||||| ||||| ||||||    
T  20911731 tttgttgttcgtcgtcttgtatatcgttgtttgattttccatgttgttgcggtttgtatttaattcatactgaaagattgactattctatcaatgatttt 20911632  T
Q  298 agcgttaacgttgcagat 315  Q
     | |||||||||||||||    
T  20911631 ggtgttaacgttgcagat 20911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 43488721 - 43488665
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||||| | | ||||||||||||||||||||||||||    
T  43488721 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt 43488665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 51923634 - 51923743
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||  ||| ||  ||||||||| |||||||| || ||| ||||||  | | ||||||||||| ||||||||||||    
T  51923634 tttcaatctaaataagtgattttcacatgcatcaag--tttttctttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcg 51923731  T
Q  224 ttgtttgatttt 235  Q
    || |||||||||    
T  51923732 ttatttgatttt 51923743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 4821766 - 4821868
Alignment:
Q  173 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||| |||||||| |||| | | ||||||||||||||||  | | |||||||||||| ||| || || |||||||| | || ||||||||||||    
T  4821766 tgatttcatcgtctaagtgcggtgttgtattgttcgtcgtcttgt-tgacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaa 4821864  T
Q  273 gatc 276  Q
    ||||    
T  4821865 gatc 4821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 46322427 - 46322356
Alignment:
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||||| |||| ||| |||||||| |||||||| || || |||||||||| || ||||||||||||    
T  46322427 gttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcatattgaaa 46322356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 54378818 - 54378923
Alignment:
Q  116 tttctctctatttcaatctaaataagtga--tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 213  Q
    |||||||| |||||||||||||| |||||  |||||| ||||||||  ||||||||| |||||||  ||| || ||||||||| | |||  |||||||||    
T  54378818 tttctctccatttcaatctaaatgagtgatttttcacgtagatcta-attttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcgtc 54378916  T
Q  214 ttgtgcg 220  Q
    |||||||    
T  54378917 ttgtgcg 54378923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 6913311 - 6913249
Alignment:
Q  108 ttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttct 169  Q
    ||||||||||||||| | |||||||||| ||| |||| ||||||||||||| |||||||||||    
T  6913311 ttcatctctttctctatgtttcaatctagataggtgattttcacatagatcgaggttttttct 6913249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 7546595 - 7546629
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  7546595 tgttgttcgtcgtcttgtgcggcgttgtttgattt 7546629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 12947377 - 12947343
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  12947377 tgttgttcgtcgtcttgtgcggcgttgtttgattt 12947343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 29239300 - 29239362
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||| ||| |||| || | | |||||||||||||||||||||||| ||||||||||    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgattt 29239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 51487091 - 51487125
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  51487091 tgttgttcgtcgtcttgtgcggcgttgtttgattt 51487125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 9998424 - 9998480
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  9998424 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 9998480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 10108193 - 10108249
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  10108193 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 10108249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 10233027 - 10233083
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  10233027 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 10233083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 12050779 - 12050723
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||| | || | ||||||||||||||||||||||||||||    
T  12050779 tttgtgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtcttgtgcggcgtt 12050723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 24396585 - 24396492
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgatttt----ccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatca 289  Q
    ||||||| ||||||||||||| ||||||||||||||    |||| || || |||||||||| |||||| |||| |||||| |  ||||||||||    
T  24396585 tgttgtttgtcgtcttgtgcgacgttgtttgattttccgtccgtcttgttgcggtgttcatttgattcttattaaaagattgtctattcaatca 24396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 36461562 - 36461506
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  36461562 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 36461506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 40487282 - 40487338
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  40487282 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 40487338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 8914693 - 8914728
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    |||||||||||||||||||||||| |||||||||||    
T  8914693 tgttgttcgtcgtcttgtgcggcgctgtttgatttt 8914728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 16235407 - 16235441
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||| |||||||||||||||||||||||||    
T  16235407 tgttgttcgccgtcttgtgcggcgttgtttgattt 16235441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 27706333 - 27706299
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||| ||||    
T  27706333 tgttgttcgtcgtcttgtgcggcgttgtttaattt 27706299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 38860251 - 38860197
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    ||||||||||| || |||||||| |  | ||||||||||||||||||||||||||    
T  38860251 tttgtgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtcttgtgcggcg 38860197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 40556671 - 40556725
Alignment:
Q  171 tgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  40556671 tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 42460731 - 42460765
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||| ||||||||||||||||||||||||||    
T  42460731 tgttgttcatcgtcttgtgcggcgttgtttgattt 42460765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 3606656 - 3606709
Alignment:
Q  94 tgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt 147  Q
    |||||| || || |||| |||||||||| |||||| ||||||||||||||||||    
T  3606656 tgaaatcactaatcttcttctctttctccctattttaatctaaataagtgattt 3606709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 30293575 - 30293419
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    ||||||||||||||||| |||  ||||||||||||||| | || ||   || ||||| |||||| || |||||||   | ||||||||||| ||||| ||    
T  30293575 tgttgttcgtcgtcttgcgcgatgttgtttgattttccatcttgttgtagtattcatttgattcctactgaaagacaaactattcaatcaatgatttgag 30293476  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
     || || |||||| || |||| | ||||  |||| ||||||| |||| ||||||||||    
T  30293475 agtcaatgttgcaaattcggatg-catgagtatttcggtcacattaactttatcatat 30293419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 31271938 - 31271885
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    ||||||||||| || |||||||| |||  | |||||||||||||||||||||||    
T  31271938 tttgtgatttcttcgtctaagtgcggttttgtgttgttcgtcgtcttgtgcggc 31271885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 36910757 - 36910716
Alignment:
Q  184 tctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||| || | ||||||||||||||||||||||||||||    
T  36910757 tctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 36910716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 52923233 - 52923192
Alignment:
Q  184 tctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| | | ||||||||||||||||||||||||||    
T  52923233 tctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtt 52923192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 6954827 - 6954771
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | | ||||||||||||||||||||||||    
T  6954827 tttgtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtt 6954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 10229433 - 10229489
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||| ||||||||||||||    
T  10229433 tttgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtt 10229489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 21289918 - 21289886
Alignment:
Q  203 tgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    ||||||| |||||||||||||||||||||||||    
T  21289918 tgttcgttgtcttgtgcggcgttgtttgatttt 21289886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 26716115 - 26716075
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaa 321  Q
    |||||||||| |||||| |||| ||||||||||||||||||    
T  26716115 attcaatcaatgattttggcgtcaacgttgcagatccggaa 26716075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 35175389 - 35175465
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||| ||||||||||| ||||||||||||||   || || || |||||||| | || || |||||||||||||    
T  35175389 tgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatc 35175465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 44960083 - 44960027
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| |||| | | || |||||||||||||||||||||    
T  44960083 tttgtgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggcgtt 44960027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 45568576 - 45568520
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||| ||||||    
T  45568576 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt 45568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 47896109 - 47896165
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || || |||||||| | | |||||||||| |||||||||||||||    
T  47896109 tttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtcttgtgcggcgtt 47896165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 23947582 - 23947228
Alignment:
Q  8 tccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaac 107  Q
    |||||||||||| |||  | |||||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||| |||||| ||| | |    
T  23947582 tccaacaagccgaccctagttttctctctctaggttttttcttctagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccatc 23947483  T
Q  108 ttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23947482 ttcatcgttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgtt 23947383  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    |||||||||||||||||||||||||||| || | || || |||||||||| |||||||||||||||||||||| || ||||||| |||||  |||| ||     
T  23947382 cgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatcgataatccaatcaacgatttgggcgtcaat 23947283  T
Q  307 gttgcagatccggaagccatggatattccggtcacttt-aattttatcatatatt 360  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  23947282 gttgcagatccggaggccatggatattctggtcactttaaattttatcatatatt 23947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 25064043 - 25064402
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | |||||||||||||||||| |||| ||  |||||| |||| ||||||||||||||||||||||||| |||||| |||    
T  25064043 cctctccaacaagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacc 25064142  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| |||    
T  25064143 tctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgattt 25064242  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||    
T  25064243 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagc 25064342  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||||||||||| || |||||||| || | ||||||||||| ||||||||||    
T  25064343 gtcaacgttgcagatccggaggcaatggatatgcccggcactttaatttcatcatatatt 25064402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 12652749 - 12653110
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||| ||||||  | |||||||||||||||||| |||  ||| |||||| |||| ||||||||||||||||||||||||| |||||| |||     
T  12652749 ctctccaacaagtcggccctagttttctctctctaggttttctctcacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcaccc 12652848  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-----ctttgtgatttcatcatctaagtgtggtggt 198  Q
      |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||     |||||||||||||||||||||||||||||||    
T  12652849 ctcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctagattttttttttcctttgtgatttcatcatctaagtgtggtggt 12652948  T
Q  199 ttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttta 298  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||| | |||||||||| |||||||||||||||||||||||||||||||||||||||      
T  12652949 ttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 12653048  T
Q  299 gcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||| ||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||||    
T  12653049 ccgtcaacgttgcagatctggaggtcatggatattccggtcgctttaattttatcatatatt 12653110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 17237529 - 17237197
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||| ||||| | ||| ||||| | | |||| ||||||||||||||||||||||||| |||||| |||   |||||||| ||||||| ||||    
T  17237529 tttctctctctatgttttcttttctagattttccattgaggggtggttttgggtcaattcttgacatgaaatcacccctcttcatctttttctctatatt 17237430  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  17237429 tcaatctaaataagttattttcacatagatctaggttttttctttgtgatttcagcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctg 17237330  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    || ||||| |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||  | || ||||||||||||||||| |||||    
T  17237329 ttggatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggtgtcaacgttgcagatccggaggccat 17237231  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||    
T  17237230 ggatattccggtcactttaattttatcatatatt 17237197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 16418967 - 16419324
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||||||     |||||||||||||||||| || ||| | |||||| ||   ||||||||||| |||||||||| || | |||| |||    
T  16418967 cctctccaacaagccggccttaattttctctctctaggttttctcatcccgtttcttcatttg-gggtggttttgagtcaattcttaacctaaaatcacc 16419065  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
     | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  16419066 catcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttg 16419165  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||   ||    
T  16419166 ttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaaaatcgattattcaatcaaagatttggacg 16419265  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  16419266 tcaacgttgcagatccggaggcaatggatattccggtgactttaattttatcatatatt 16419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 56 - 360
Target Start/End: Complemental strand, 33740795 - 33740489
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| |||||||||| |||||||||||||| | |||| |||   |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33740795 ttcttcattgaggggtggtttttggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagtgattttcacatag 33740696  T
Q  155 atctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgtt 253  Q
    || |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||  || | |||||||    
T  33740695 atttaggtttttttctttgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgtt 33740596  T
Q  254 catctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatc 353  Q
    ||| ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  33740595 catttgatttatattgaaagatcgattattcaatcgaagatttgagcgtcaacgttgcagatccggaggccatggatatttcggtcactttaattttatc 33740496  T
Q  354 atatatt 360  Q
    |||||||    
T  33740495 atatatt 33740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 56 - 360
Target Start/End: Complemental strand, 7881320 - 7881013
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| |||||||||||| |||||| |||||||||||| |||   |||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  7881320 ttcttcattgaggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgattttcacatag 7881221  T
Q  155 atctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    |||||| ||||||  |||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| | ||||||    
T  7881220 atctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgt 7881121  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||  ||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||    
T  7881120 tcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcat 7881021  T
Q  353 catatatt 360  Q
    ||||||||    
T  7881020 catatatt 7881013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 8028363 - 8028029
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||| |||||||| |  | ||| |||||| ||||  |||| ||||||||||||| ||||  || ||| |||  ||||||||| ||||||||| ||    
T  8028363 tttctctctttaggttttctagtacagtttcttcattgagaggtgattttgggtcaattattgatctggaatcaccccacttcatctttttctctctgtt 8028264  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8028263 tcaatctaaataagtgattttcacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 8028164  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||||||| ||||  || |||||||||||| ||||||||||| |||||||| ||||||||||||||||||  |||||||| ||||||||||| | | ||    
T  8028163 gtttgatttcccgtcatcgtacggtgttcatttgattcatattaaaagatcggttattcaatcaaagatttgggcgttaacattgcagatccgaaggtca 8028064  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  8028063 tggatattccagtcactttaattttatcatatatt 8028029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 4088297 - 4088626
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttc-tctctatttcaat 132  Q
    |||||||||||| | || ||| |||||  |||| ||||||||||||||||||||||||| |||||| ||| | |||||| | |||  |||||||| ||||    
T  4088297 tctctaggttttcttttacaggttctttattgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcattttttttatctctattacaat 4088396  T
Q  133 ctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4088397 ctaaataagtgattttcacatagatctagttttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttg 4088496  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    |||| |||| ||| | || ||||||| |||||| ||  |||||||||||| |||||||||||||||  |||| ||||||||||||||||| |||||||||    
T  4088497 atttcccgtcttcgtgcgatgttcatttgattcttacagaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggat 4088596  T
Q  331 attccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||    
T  4088597 attccggtcactttaattttatcatatatt 4088626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 8496797 - 8497133
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  |||||| |||| ||||||||||| ||||||||||||| |||||| |||   |||||||| ||||||| ||||    
T  8496797 tttctctctctaggttttctcttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctcttcatctttttctctttatt 8496896  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttt---ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||| ||||||||||||||||||   ||||||||  ||||||||| |||||| |||| ||||||||||||| ||||||||||||    
T  8496897 tcaatctaaataagtgattttcacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgttcgtcatcttgtgcggcg 8496996  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagc 323  Q
    |||||||||||  ||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||  |||  |||||||||||||| || ||    
T  8496997 ttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttgggcggcaacgttgcagatcctgatgc 8497096  T
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||||||||||| ||||||||||    
T  8497097 aatggatattccggtcactttaatttcatcatatatt 8497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 31 - 360
Target Start/End: Original strand, 12165676 - 12166005
Alignment:
Q  31 ctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttca 130  Q
    |||||||| |||||| |||||||| |||||| |||| | ||  ||||||||||||| ||||| |||||| ||    |||||||| ||| |  ||||||||    
T  12165676 ctctctctcggttttctcttccagtttcttcattgaggagttattttgggtcaattattgacctgaaatcactcctcttcatctttttatgcctatttca 12165775  T
Q  131 atctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  12165776 atctaaataagtgattttcacatagatttaggttttttctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttc 12165875  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    |||||  ||| ||||| |||||||||| | |||||||||||||||| |||||||||||| |||||||  |||| ||||||||||||||||| || |||||    
T  12165876 gatttcacgt-ttcttgcggtgttcatttaattcatattgaaagattgattattcaatcgaagatttgggcgtcaacgttgcagatccggatgctatgga 12165974  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||||||||||||||||    
T  12165975 tattccggtcactttaattttatcatatatt 12166005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 74 - 360
Target Start/End: Original strand, 4468437 - 4468724
Alignment:
Q  74 ttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttg 172  Q
    ||||||||||||||||||| |||| | |||   ||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  4468437 ttttgggtcaattcttgacatgaagtcacccctcttcatcttgttctctctatttcaatctaaataagtgattttcatatagatctaggttttttctttg 4468536  T
Q  173 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| | | |||||||| ||||| ||||||||     
T  4468537 tgatttcatcatataagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaag 4468636  T
Q  273 gatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||   ||| |||||||||||||| || | |||||||||||||| ||||||||||||||||||||||    
T  4468637 gatcgattattcaatcaaagatttggccgtcaacgttgcagatccagaggtcatggatattccggccactttaattttatcatatatt 4468724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 4984818 - 4984478
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    ||||| |||||||| |||| ||| |||| | |||| ||||||||||||||||||||||||| |||||| ||  | |||||||| ||||||||||||||||    
T  4984818 tctctttaggttttctcttacagtttctccattgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatct-tttctctctatttcaa 4984720  T
Q  132 tctaaataagtgattt-cacata----gatctaggtttttt--------ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    |||||||||||||||| ||||||    ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4984719 tctaaataagtgattttcacatatatagatctaggtttttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 4984620  T
Q  219 cggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccg 318  Q
    ||| |||||||||||| |||| ||| |  ||||||||| |||||||||||||||||||||||||||||||||||||||  || | |||||||||||| ||    
T  4984619 cggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgcagattcg 4984520  T
Q  319 gaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || | ||||||||||||| |||||||||||||||||||||||    
T  4984519 gaggtcatggatattccgatcactttaattttatcatatatt 4984478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 10228518 - 10228845
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatc 133  Q
    |||||||||||| |||||| | |||||| |||  ||||||||||||||||||||||||| |||||| |||   |||||||| | |||||||| |||||||    
T  10228518 tctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatc 10228616  T
Q  134 taaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttga 231  Q
    ||||||||||| ||| ||||| ||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||     
T  10228617 taaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgc 10228716  T
Q  232 ttttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggata 331  Q
    ||| |||| |||||  ||||||||| | |||  ||||||||||| ||||||||||||||||||||   ||| ||||||||||||||||| ||||||||||    
T  10228717 tttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggata 10228816  T
Q  332 ttccggtcactttaattttatcatatatt 360  Q
    ||||||| |||||||||||||||||||||    
T  10228817 ttccggtgactttaattttatcatatatt 10228845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 5 - 353
Target Start/End: Complemental strand, 8196675 - 8196325
Alignment:
Q  5 ctctccaacaagccggcccacgatt-tctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||   | || ||||||||||| |||| |  | ||| |||||| |||| |||||||||||| ||| |||||||| | |||| |||    
T  8196675 ctctccaacaagccggccttagtttctctctctctagattttctggtacagtttcttcattga-gggtggttttggatcagttcttgacctaaaatcacc 8196577  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttg 201  Q
        ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8196576 cgtattcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatataagtgtggtggtttg 8196477  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||||||||||||||||||| |||| ||  | |||||||||| |||||| ||  |||||||||||||||||||||| |||||  |||    
T  8196476 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcttacagaaagatcgattattcaatcaacgatttgggcg 8196377  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatc 353  Q
    | ||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  8196376 tcaacgttgtagatccggaggccatgtatattccggtcactttaattttatc 8196325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 56 - 360
Target Start/End: Complemental strand, 7876262 - 7875955
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| |||||||||||| |||||| ||||| | |||| ||| | |||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  7876262 ttcttcattgaggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatag 7876163  T
Q  155 atctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    |||||| ||||||  |||||  |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| | ||||||    
T  7876162 atctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgt 7876063  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||  ||||||||||| ||||||||||| |||||||||||||||  |||| ||||||||||||||||| || |||||||||||| |||||||||||| ||    
T  7876062 tcaattgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccgatcactttaatttcat 7875963  T
Q  353 catatatt 360  Q
    ||||||||    
T  7875962 catatatt 7875955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 35001510 - 35001756
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 213  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35001510 tttctctctattttaatctaaataagtgacttttacatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 35001609  T
Q  214 ttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcag 313  Q
    ||||||||||||||||| ||| |||| ||||| |||||||||| | |||| |||||||||||| |||||||||||||||||||   ||| ||||||||||    
T  35001610 ttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcag 35001709  T
Q  314 atccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| | | |||| |||||||||| |||||||||||||||||||||    
T  35001710 atccgaaggtcatgaatattccggtgactttaattttatcatatatt 35001756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 191 - 360
Target Start/End: Original strand, 33110608 - 33110777
Alignment:
Q  191 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaa 290  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||| | |||||||||| ||||||||||| |||||||||||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  291 agattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33110708 agattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatt 33110777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 42 - 360
Target Start/End: Complemental strand, 33543851 - 33543535
Alignment:
Q  42 ttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaactt-catctctttctctctatttcaatctaaataa 140  Q
    |||| ||||| || ||||||||||| ||||||||||| |||| || ||||| |||||| ||  | ||| ||||| ||||||| |||||||||||||||||    
T  33543851 ttttctcttctagtttcttcgttgaggggtggttttgagtcagtttttgacctgaaatcactcatctttcatctttttctctatatttcaatctaaataa 33543752  T
Q  141 gtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccg 238  Q
    || ||||  ||||||||| || |||||| ||| |||||||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||||||| |    
T  33543751 gtaatttttcacatagatttaagttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttctg 33543653  T
Q  239 tattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggt 338  Q
    | || || |||||||||  | ||||||||||||||||||| |||||||||||| ||||  | || || |||||||||||||||| ||||| |||||||      
T  33543652 tcttgttgcggtgttca--ttattcatattgaaagatcgactattcaatcaaaaatttgggtgtcaatgttgcagatccggaag-catgggtattccgac 33543556  T
Q  339 cactttaattttatcatatatt 360  Q
    || ||||||||||| |||||||    
T  33543555 ca-tttaattttattatatatt 33543535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 28635288 - 28635024
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatt---tcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgtt 203  Q
    |||||| | ||||| | ||||||||| |||||||||||||   | ||||||||||| |||||||||  |||||||| |||| | ||||||| ||||||||    
T  28635288 cttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcatttgagtgtggcggtttgtt 28635189  T
Q  204 gttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtt 303  Q
    |||||||||||||| ||| ||||||||||||  |||||  || |||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||     
T  28635188 gttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagattaattattcaatcaaagatttgagcgtc 28635089  T
Q  304 aacgttgcagatcc--------ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || |||||||||||        ||||| |||||||| ||||||||||||||||||||||| ||||    
T  28635088 aatgttgcagatccggaggcatggaagacatggatactccggtcactttaattttatcatgtatt 28635024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 34489084 - 34489327
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||| ||  ||||| | ||| |||||||||| | |||||| ||||||| |||| |||   |||||||| |||||||||| |||||    
T  34489084 tctctctaggttttctctttcattttcttggatgaggggtggtttttgatcaatttttgacttaaaatcacccctcttcatctttttctctctaattcaa 34489183  T
Q  132 tcta--aataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgt 227  Q
    | ||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  34489184 tatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgt 34489283  T
Q  228 ttgattttccgtattcttacggtgttcatctgattcatattgaa 271  Q
    ||||||| || |||| ||  ||||||||| ||||||||||||||    
T  34489284 ttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 264
Target Start/End: Original strand, 17334608 - 17334848
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| |||| |||| ||  |||||| |||| |||||||||||| || ||||||||  |||||| ||||| |||||||| ||||| | ||||    
T  17334608 tttctctctctagattttctcttacaatttcttcattga-gggtggttttggatcgattcttgatctgaaatcaccaatcttcatctttttctgtttatt 17334706  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttt----ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    |||||||||||||||||||| |||||||||||| |||||    |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  17334707 tcaatctaaataagtgattttcacatagatctaagttttttttttctttgtaatttcataatctaagtgtggtgatttgttgtacgtcgtcttgtgcggc 17334806  T
Q  223 gttgtttgattttccgtattcttacggtgttcatctgattca 264  Q
    ||||||||||||||||| ||| | || || |||| |||||||    
T  17334807 gttgtttgattttccgtcttcgtgcgatgatcatttgattca 17334848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 33109649 - 33109826
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||||||||||  | ||||||| | |||||||| |||||||| |||||| |||||||||||||||||||||||| ||||| | ||||   | | ||||    
T  33109649 aacaagccggccctagttttctctttttaggttttctcttccagtttcttcattgacgggtggttttgggtcaatttttgacctaaaatcgtccatcttc 33109748  T
Q  111 atctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatcta 187  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33109749 atctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatcta 33109826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 360
Target Start/End: Original strand, 25337499 - 25337731
Alignment:
Q  125 atttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    |||||||||||||||| |||||| |||||| ||||||||||||| ||| |||||||| |||||  ||||||||||| ||||||||||||||||| ||||     
T  25337499 atttcaatctaaataaatgattttcacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggt 25337598  T
Q  223 gttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaag 322  Q
    ||||||||||||| ||| || || |||||||||| |||||||||||||||||||||||||    | |||||||| ||| | || |||||| |||| | ||    
T  25337599 gttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatcgattat----tgaaagatttgagcatcaaggttgcaaatccag-ag 25337693  T
Q  323 ccatggatattccggtcactttaattttatcatatatt 360  Q
     ||| | |||||| ||||| ||||||||||||||||||    
T  25337694 gcattggtattccagtcaccttaattttatcatatatt 25337731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 7027799 - 7027877
Alignment:
Q  159 aggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttcc 237  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  7027799 aggttttttccctgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgattttcc 7027877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 7027947 - 7028029
Alignment:
Q  278 attattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||| ||||| ||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7027947 attattcaatcaaagatttgagcgtcaaccttgtagatccggaggccatagatattccggtcactttaattttatcatatatt 7028029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 296
Target Start/End: Complemental strand, 4352148 - 4351971
Alignment:
Q  125 atttcaatctaaataagtgattt-cacatagatctaggtttttt-----ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    ||||||||| ||||||||||||| || |||||| ||| ||||||     ||| |||||||| |||||  ||||||||| | |||||||||||||||| ||    
T  4352148 atttcaatccaaataagtgattttcatatagatttagtttttttgtcttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatg 4352049  T
Q  219 cggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
     |||||| |||||||| ||||  |  | |||| ||||| | |||||||||||||||||||||||| ||||||||||||    
T  4352048 tggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaaagatcgattatttaatcaaagattt 4351971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 16892816 - 16892727
Alignment:
Q  271 aagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  16892816 aagatcaattgttcaattaaagatttaggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 16892727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 357
Target Start/End: Complemental strand, 1704277 - 1704065
Alignment:
Q  144 atttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattc 243  Q
    |||||||||||||| | |||||||||| || ||||  || ||| ||||||||| | ||||||||||  ||||||||  | || ||| ||||  ||| ||     
T  1704277 atttcacatagatccatgttttttcttagtaattttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttg 1704178  T
Q  244 ttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactt 343  Q
    || |||||||||| || |||  || |||| |||||||||||||| || ||||| | | | ||||||| ||||||||| | |||| ||||||| |||||||    
T  1704177 ttgcggtgttcatttggttctaatcgaaatatcgattattcaataaatgatttgaacatcaacgttgtagatccggatg-catgaatattccagtcactt 1704079  T
Q  344 taattttatcatat 357  Q
    ||||| ||||||||    
T  1704078 taattgtatcatat 1704065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 276
Target Start/End: Complemental strand, 26588648 - 26588499
Alignment:
Q  130 aatctaaataagtgatttc-acatagatctaggttttttctttgtg--atttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||| |||| ||||| ||| || |||||| ||||||  | |||||| | | |||| || | | ||||| | |||||||||||||||||||    
T  26588648 aatctaaataagtggtttccacatatatcaagtttttttttttgtgtgaattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttg 26588549  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||| |||| || || |||||||| | || ||||||||||||||||    
T  26588548 tttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 17334846 - 17334919
Alignment:
Q  287 tcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||  | || ||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||    
T  17334846 tcaaagatttgggtgtcaacgttgcagatccggaggcaatggatattccagtcactttaatttcatcatatatt 17334919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 20619585 - 20619633
Alignment:
Q  312 agatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20619585 agatccggagaccatggatattccggtcactttaattttatcatatatt 20619633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 22571461 - 22571533
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||| ||||||| | || || |||||||||    
T  22571461 tgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaa 22571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 12059732 - 12059687
Alignment:
Q  312 agatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||  |||||||||||||||||||||||||||||||||||    
T  12059732 agatccggagaccatggatattccggtcactttaattttatcatat 12059687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 31296807 - 31296879
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||| || |||||||||||||||||||||||| | | || || | |||||||| |||||||||||||||    
T  31296807 tgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 31296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 31575638 - 31575530
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaa 271  Q
    |||||||| |||||| | || |||| | |||||||| ||||| |||||| |||||||||||||  ||| || || || ||||| |||||||| |||||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaa 31575539  T
Q  272 agatcgatt 280  Q
    | |||||||    
T  31575538 aaatcgatt 31575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 30493491 - 30493553
Alignment:
Q  172 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||| || ||| |||| |||| | |||||||||||||||||||| ||||||||||||||    
T  30493491 gtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgattt 30493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 8266546 - 8266586
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt 147  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  8266546 cttcatctttttctctctacttcaatctaaataagtgattt 8266586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 23128577 - 23128633
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||| |||||||| || | | ||||||||||||||||||| ||||||    
T  23128577 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt 23128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 32059868 - 32059924
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||||  | | ||||||||||||||||||||||||||    
T  32059868 tttgtgatttcttcgtctaagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtt 32059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 32327348 - 32327292
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||  |||||||| || | | ||||||||||||||||||||||||||    
T  32327348 tttgtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 32327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 33053299 - 33053243
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  33053299 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 33053243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 13436707 - 13436770
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgattt 178  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||  |||||| || |||||||    
T  13436707 tttctctctatttcaatttaaataagtgattttcacataaatctatattttttattcgtgattt 13436770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 14801810 - 14801845
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    |||||||||||||||||||||||| |||||||||||    
T  14801810 tgttgttcgtcgtcttgtgcggcgctgtttgatttt 14801845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 30776655 - 30776690
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30776655 tgttgttcgtcatcttgtgcggcgttgtttgatttt 30776690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 5582835 - 5582757
Alignment:
Q  90 gacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt 167  Q
    |||||||||| ||||  |||||||| ||||| | ||||| ||||||||||| ||| ||||| ||||||||| |||||||    
T  5582835 gacttgaaatcaccactcttcatctttttctttatattttaatctaaataaatgattttcaaatagatctaagtttttt 5582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 8102709 - 8102743
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||| ||||||||||||||||||||||||||||||    
T  8102709 tgtttttcgtcgtcttgtgcggcgttgtttgattt 8102743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 546014 - 546047
Alignment:
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||| |||||||||||||    
T  546014 gttgttcgtcgtcttgtgcgacgttgtttgattt 546047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 28981126 - 28981199
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    |||||| |||||||||| ||| ||| |||  || | | |||||||||||||||| ||||| |||||||||||||    
T  28981126 ttttttttttgtgattttatcgtctgagtacggcgttgtgttgttcgtcgtcttctgcggtgttgtttgatttt 28981199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 34018519 - 34018568
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    ||||||||||| || ||||||||||| | | |||||||||||||||||||    
T  34018519 tttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtg 34018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 68132 - 68076
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || ||||||||||||| | |||| |||  ||||||||||||||||    
T  68132 tttgtgatttcgtcgtctaagtgtggtgttgtgttattcaccgtcttgtgcggcgtt 68076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 606163 - 606219
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||| ||||||||||||||    
T  606163 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtt 606219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7515333 - 7515277
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||| ||| ||||    
T  7515333 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtt 7515277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 27267125 - 27266770
Alignment:
Q  8 tccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaac 107  Q
    ||||||||| ||||||  | |||||||||||||||||| |||||| | ||||||   || ||||||||||||||||||||||||| |||||| |||   |    
T  27267125 tccaacaagtcggccctagttttctctctctaggttttctcttcccgtttcttcaccgaagggtggttttgggtcaattcttgacctgaaatcacccctc 27267026  T
Q  108 ttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  27267025 ttcatatttttctctctatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttg 27266926  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||||||||||  |||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |    
T  27266925 ttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtca 27266826  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  27266825 acgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatt 27266770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 21060526 - 21060194
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| ||||| ||||| ||| | ||  |||||||||||||||||||||||  |||||| ||||  |||||||| ||||||| ||||    
T  21060526 tttctctctctaggttttctcttctagatttttcatcgagtggtggttttgggtcaattcttgatctgaaatcaccactcttcatctttttctctatatt 21060427  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |     
T  21060426 tcaatctaaataagtgattttcacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactt 21060327  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| ||||| | |||||||||| |||||| ||| ||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  21060326 tttgatttcccgtcttcttgcagtgttcatctaattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccat 21060228  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||    
T  21060227 ggatattccggtcactttaattttatcatatatt 21060194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 34881521 - 34881885
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | |||||||||| ||||||| |||| ||| |||| | |||| |||||||| |||||||||||||||| |||||| |||    
T  34881521 cctctccaacaagtcggccctagttttctctctccaggttttctcttacagtttctccattgaggggtggttctgggtcaattcttgacctgaaatcacc 34881620  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt---------ttctttgtgatttcatcatctaagtgtg 193  Q
       |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||         ||||||||||||||||||||||||||||    
T  34881621 tctcttcatct-tttctctctatttcaatctaaataagtgattttcacatagatctagtttttttcttttttttctttgtgatttcatcatctaagtgtg 34881719  T
Q  194 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaaga 293  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34881720 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattattcaatcaaaga 34881819  T
Q  294 ttttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||  |||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  34881820 tttgggcgtcaacgttgcagatccggaggccatggatattcc-gtcactttaattatatcatatatt 34881885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 781264 - 781556
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt 166  Q
    |||||||||||| |||||||||||| |||||| ||| | |||||||| ||||||| |||||||||||||||||||||||| || ||||||||||| ||||    
T  781264 gggtggttttggttcaattcttgacctgaaatcacccatcttcatctttttctctatatttcaatctaaataagtgattttcagatagatctagggtttt 781363  T
Q  167 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata 266  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||| |||| ||||| |||||||||||||||||||     
T  781364 tctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcatt 781463  T
Q  267 ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| |||||| |||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  781464 ttg-aagatcaattattcaatcaaaaatttgagcgtcaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 781556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 19281213 - 19280856
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||    |||||||||||||||||| || ||| | |||||| |||  |||||||||||||| |||| |||||  ||||| |||    
T  19281213 cctctccaacaagtcggccctaattttctctctctaggttttctcatcccgtttcttcattggggggtggttttgggtaaatttttgaccggaaatcacc 19281114  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19281113 catcttcatctttttctctctatttcaatctaaataagtgactttcacacatatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 19281014  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||||| |||||||||| |||||| | ||||| | |||||||| | |||| ||||||||||||||||||||||||||||||||   |||    
T  19281013 tgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgt 19280914  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| || |||||||||||||| |||||||| ||||||||||||    
T  19280913 caacgttgcagatccggaggctatggatattccggtgactttaatattatcatatatt 19280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 18677711 - 18677376
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||| ||||||||||| | || | | |||||| |||| ||||||||||||||||||| ||||  |||||| | |   |||||||| ||||||||||||    
T  18677711 tttctccctctaggttttcttttaccgtttcttcattgaggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctctctatt 18677612  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    | |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  18677611 ttaatctaaataagtgattttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgggacgt 18677512  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||| | ||| |||| ||| |||||||||||||  ||    
T  18677511 tgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatcgattatttaatcaaataatttggcgtcaacattgcagatccggagacc 18677412  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  18677411 atggatattccggtcactttaattttatcatatatt 18677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 7246776 - 7247127
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||||||||||    |||||||||||||||||| |||||| | |||||| |||  |||||||||||||||||||||| || |||||  |||   ||||    
T  7246776 aacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttc 7246875  T
Q  111 atctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 208  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  7246876 atctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcg 7246975  T
Q  209 tcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgt 308  Q
    ||||||||||||||||| |||  ||| | || ||||| |||||||||| | |||| |||||| ||||||||||| ||||||||||||| | ||| |||||    
T  7246976 tcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgt 7247075  T
Q  309 tgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7247076 tgcagatccggaggccatggatattccggtgactttaattttatcatatatt 7247127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 41 - 359
Target Start/End: Original strand, 16981138 - 16981457
Alignment:
Q  41 gttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataa 140  Q
    ||||| |||||||  |||||| |||| ||||||| |||| |||||||||||| |||||| ||    |||||| | |||||||||||||||||||||||||    
T  16981138 gttttctcttccattttcttcattgaggggtggtattggatcaattcttgacctgaaatcactcctcttcatatttttctctctatttcaatctaaataa 16981237  T
Q  141 gtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgt 239  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||    
T  16981238 gtgatttacacatatatctaggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgt 16981337  T
Q  240 attcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtc 339  Q
     ||||| |||||||| | |||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||||||| | |||||||||||||||     
T  16981338 cttcttgcggtgttcctttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcatcgttgcagatccggaggtcatggatattccggtg 16981437  T
Q  340 actttaattttatcatatat 359  Q
    ||||||||||||||||||||    
T  16981438 actttaattttatcatatat 16981457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 357
Target Start/End: Complemental strand, 7887206 - 7886852
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | ||||||| ||||  |||| |||||||| |||||| | || ||||||||||||||| ||||||||| |||||| | |    
T  7887206 cctctccaacaagccggccctagttttctctttctaacttttctcttccagtttcttcatcgaggggtggttttgggtccattcttgacctgaaatcatc 7887107  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       |||| ||| || |||||||||| |||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  7887106 cctcttcgtcttttcctctctattttaatctaaataagtgattttcacataaatctatgttttttctttttgatttcatcatctaagtgtggtggtttgt 7887007  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||| |  | |||||||||||||||| ||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| || |    
T  7887006 tgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatcgattattcaatcaaagattttggcat 7886907  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||||||||||| | ||||||||||||||||||| || |||||||||||    
T  7886906 taacgttgcagatccggaggtcatggatattccggtcactatagttttatcatat 7886852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 7 - 360
Target Start/End: Complemental strand, 19260074 - 19259723
Alignment:
Q  7 ctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaa 106  Q
    |||||||||||||||||   | || |||||||||||||| |||| | | ||||||||||| ||||||||||||||||||||||||| |||||| |||  |    
T  19260074 ctccaacaagccggccct--aattttctctctaggttttctcttacggtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcacccca 19259977  T
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     ||| |   ||||||||||||||||||||||||||||||||  |||||||||||| |||||||  || ||||||||||||||||||||||||||||||||    
T  19259976 attctt---tttctctctatttcaatctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgt 19259880  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||||||| |||||||||||  |||| ||| | ||||||| || |||||||||||||||||||||||||||||||||||||||  ||||    
T  19259879 tgttcgtcgtcttgtgcggtgttgtttgattc-ccgtcttcgtgcggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgt 19259781  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  19259780 caacgttgcagatccaaaggccatggatattccggtcactttaattttatcatatatt 19259723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 41184712 - 41184351
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||||||||||    ||||| |||||||||||| |||| ||| |||| | |||| || || ||||||||||||| ||||| |||||| ||||    
T  41184712 ctctccaacaagccggccctaattttctttctctaggttttctcttacagtttctccattgagggatgattttgggtcaatttttgacatgaaatcacca 41184613  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggtttttt----------ctttgtgatttcatcatctaagtgtgg 194  Q
      |||||||| ||||||||||||||||||||||||| |   ||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  41184612 ttcttcatct-tttctctctatttcaatctaaataatt---ttcacatagatctaggtttttttttgttttttctttgtgatttcatcatctaagtgtgg 41184517  T
Q  195 tggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagat 294  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| |  ||||||| | |||||||||||||||||||||||||||||||||||||    
T  41184516 tggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatcgattattcaatcaaagat 41184417  T
Q  295 tttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||  |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  41184416 ttgggcgtcaacgttgcagatccggaggccatggatattccagtcactttaattttatcatatatt 41184351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 2058004 - 2057749
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  2058004 cttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggtttttttctttatgatttcatcatctaagtgtggtggtttgttg 2057905  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    |||||||||||| ||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  2057904 ttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtca 2057805  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  2057804 acgttgcagatccagatgccatggatattccggtcactataattttatcatatatt 2057749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 7241600 - 7241952
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||||||||||    |||||||||||||||||| |||||| | |||||| |||  |||||||||||||||||||||| || |||||  |||   ||||    
T  7241600 aacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttc 7241699  T
Q  111 atctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 208  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  7241700 atctttttctctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcg 7241799  T
Q  209 tcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgt 308  Q
    ||||||||||||||||| |||  ||| | || ||||| |||||||||| | |||| |||||| ||||||||||| ||||||||||||| | ||| |||||    
T  7241800 tcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgt 7241899  T
Q  309 tgcagatccggaagccatggatattccgg-tcactttaattttatcatatatt 360  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  7241900 tgcagatccggaggccatggatattccggttgactttaattttatcatatatt 7241952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 7150580 - 7150246
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||||| | |||||| ||   || ||||||||| | |||| ||||| |||||| |||   |||||||| ||||||||||||    
T  7150580 tttctctctctaggttttctcttcccgtttcttcattcggggatggttttggattaatttttgacctgaaatcacccctcttcatctttttctctctatt 7150481  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7150480 tcaatctaaataagtgactttcacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 7150381  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||| ||| |||| ||||| |||||||||| | ||||  ||||||||||| |||||||||||||||||||   ||| |||||||||||||||||  |||    
T  7150380 gtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccggagacca 7150281  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |||| |||||||||||||||||||||    
T  7150280 tggatatttcggtgactttaattttatcatatatt 7150246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 30298131 - 30298375
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30298131 tttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 30298230  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    ||||||||| ||||||||||||||| ||||| ||||||| || |||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||    
T  30298231 tgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattg-aagattgattattcaatcaaagatttgggcgtcaacgttgcaga 30298329  T
Q  315 tccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||| |||||||||||||||| ||||||||||||||||||||||    
T  30298330 tctggaggccatggatattccggccactttaattttatcatatatt 30298375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 42579688 - 42580056
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||| ||||  | |||||||||||||||||| |||| ||| |||| | |||| ||||||||||||||||||| ||||| |||||| |||    
T  42579688 cctctccaacaagcccgccctagttttctctctctaggttttctcttacagtttctccattgaggggtggttttgggtcaattattgacatgaaatcacc 42579787  T
Q  104 aaacttcatctcttt---ctctctatttcaatctaaataagtgattt-cacatagatctaggttt--------tttctttgtgatttcatcatctaagtg 191  Q
        ||||| | |||   || |||||||||||||||||||||||||| ||||||||| |||||||        |||||||||||||||||||||||||||    
T  42579788 ccttttcattttttttttctttctatttcaatctaaataagtgattttcacatagatttaggtttttttgttttttctttgtgatttcatcatctaagtg 42579887  T
Q  192 tggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaa 291  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| || ||| | | |||||||| | ||||||||| ||||||||||||||||||||||    
T  42579888 tggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcattttattcatatttaaagatcgattattcaatcaaa 42579987  T
Q  292 gattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||  |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  42579988 gatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatt 42580056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 43262086 - 43261730
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||| |||||||||| ||  | ||||||||||||||||||  ||  ||  || ||| ||||  |||| ||||| |||||||||| || |||||| |||    
T  43262086 cctctctaacaagccggtcctagttttctctctctaggttttcactatcaattttttcattgagaggtgattttgagtcaattcttaacctgaaatcacc 43261987  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  43261986 catcttcatctttttatctctatttcaatctaaataagtgattttcacatagatctaggttttc-ctttgtgattttatcatctaagtgtggtggtttgt 43261888  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||||||||||||||||||||||  | ||    
T  43261887 tgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttgggagt 43261788  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     || |||||||||||| | | |||||||||||||||||||||||| ||||||||||||    
T  43261787 caaagttgcagatccgaaggtcatggatattccggtcactttaatgttatcatatatt 43261730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 41 - 360
Target Start/End: Complemental strand, 35475568 - 35475249
Alignment:
Q  41 gttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataa 140  Q
    ||||| ||||| ||||| | | |||| ||||| |||||||| |||||||||  |||||| |||   ||||||||  || ||| |||||||||||||||||    
T  35475568 gttttctcttctagattttccattgaggggtgattttgggttaattcttgatctgaaatcacctctcttcatcttgttatctatatttcaatctaaataa 35475469  T
Q  141 gtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgt 239  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| || ||||||| ||||||||||  |||    
T  35475468 gtgattttcacatagatctagattttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgt 35475369  T
Q  240 attcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtc 339  Q
     ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||| | ||||||||||||||||| |||    
T  35475368 cttcttgcggtgttcatttgattcatatt-aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagccatggatattccagtc 35475270  T
Q  340 actttaattttatcatatatt 360  Q
    |||||||||||||||||||||    
T  35475269 actttaattttatcatatatt 35475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 26578084 - 26578420
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||| || |||| |||| ||  |||||  |||| || ||||||| |||||||||||||| |||||| ||  | |||||||| ||||||| ||||    
T  26578084 tttctctctccagattttctcttacaatttctttattgatggatggtttttggtcaattcttgacctgaaatcactcatcttcatctttttctctttatt 26578183  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttt---ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||| ||    
T  26578184 tcaatctaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaaatgtagtgatttgttgttcgtcgtcttgtgcgacg 26578283  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagc 323  Q
    ||||||||||| |||| ||| | | |||||||| ||||||||||||||||||||||| |||||||||||||||  |||| || |||||||||||||||||    
T  26578284 ttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaatgttgcagatccggaagc 26578383  T
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
     ||| ||||| ||||||||||||||| ||||||||||    
T  26578384 aatgaatatttcggtcactttaatttcatcatatatt 26578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 35 - 360
Target Start/End: Original strand, 28235427 - 28235753
Alignment:
Q  35 ctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatct 134  Q
    |||||| |||| |||||||| |||||  |||| ||||||||||||||||||  ||||| |||||| |||   |||||||| ||||| |||||||| ||||    
T  28235427 ctctagattttctcttccagtttctttattgaggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttctttctatttcgatct 28235526  T
Q  135 aaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  28235527 aaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttgatt 28235626  T
Q  234 ttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatatt 333  Q
    |||| | ||||| |||||||||| | |||| |||||||||||| | ||||||||||||||||   |||| || | || ||||| ||| ||||||||||||    
T  28235627 ttccatcttcttgcggtgttcattttattcttattgaaagatcaagtattcaatcaaagattcaggcgtcaaagatgtagatctggaggccatggatatt 28235726  T
Q  334 ccggtcactttaattttatcatatatt 360  Q
     || |||||||||||||||||||||||    
T  28235727 tcgatcactttaattttatcatatatt 28235753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 3271651 - 3271313
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||  |||||||||  || |||||| |||| ||||| |||| |||||||||||||| |||||| ||    |||||||| ||||||||| ||    
T  3271651 tttctctctctaaattttttcttatagtttcttcattga-gggtgattttaggtcaattcttgacatgaaatcactcctcttcatct-tttctctctgtt 3271554  T
Q  128 tcaatctaaataagtgattt-cacatagatctag-------gttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    |||||||||||||||||||| ||||||| ||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3271553 tcaatctaaataagtgattttcacataggtctaatttttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgc 3271454  T
Q  220 ggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgg 319  Q
     ||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||| |||||| ||||||||||||   ||| ||||||||||||| ||    
T  3271453 agcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatccattatttaatcaaagatttggacgtcaacgttgcagatcagg 3271354  T
Q  320 aagccatggatattccggtcactttaattttatcatatatt 360  Q
    |  |||||||||||||| |||||||||||||||||||||||    
T  3271353 agaccatggatattccgatcactttaattttatcatatatt 3271313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 326
Target Start/End: Complemental strand, 36344757 - 36344436
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||| ||||||    ||| ||||||||| |||| |||||||  |||||| |||| ||||||||||| ||| ||||||||| | |||| |||     
T  36344757 ctctccaacaagtcggccctaattttttctctctagattttctcttccaatttcttcattgaggggtggttttgagtcgattcttgacctaaaatcaccc 36344658  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgtt 203  Q
      |||||||| ||||||| ||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  36344657 ctcttcatctttttctctatatttcaatctaaataagttattttcacatggatctaagttttttctttgtgattt-atcatctaagtgtggtggtttgtt 36344559  T
Q  204 gttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtt 303  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||||||||||||  ||| |||||||||||| ||  ||||     
T  36344558 gttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagattaatttttcaatcaaagagttgggcgtg 36344459  T
Q  304 aacgttgcagatccggaagccat 326  Q
    ||| ||||||||||||| |||||    
T  36344458 aacattgcagatccggaggccat 36344436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 30371535 - 30371830
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||  | ||||||| |||||||||| |||| ||  |||||| |||| ||||||||||||||||||  ||||| |||||| |||    
T  30371535 cctctccaacaagtcggccctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggtcaatatttgacctgaaatcacc 30371634  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| |||    
T  30371635 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgattt 30371734  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    |||||||||| ||||||||||||||||||||||| || | ||| | |||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  30371735 gttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttcaatcaaagattt 30371830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 70 - 360
Target Start/End: Original strand, 43148607 - 43148895
Alignment:
Q  70 gtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-tt 167  Q
    ||||||||||||||||||||||||| |||| |   |  ||||||  |||||||||||||| |||||||||||||| ||||||||| || ||| |||| ||    
T  43148607 gtggttttgggtcaattcttgacttaaaattattcattttcatccttttctctctatttcgatctaaataagtgactttcacatatatttagattttttt 43148706  T
Q  168 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||| || ||||||| | |||| |||    
T  43148707 ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctat 43148806  T
Q  268 tgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||    ||||||||||   | | ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  43148807 tgaaagatcgattat----tcaaagatttggacctcaacgttgcagatctggaggccatggatattccggtgactttaattttatcatatatt 43148895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 27751725 - 27752093
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||| |||||||||||  | |||| |||| |||||||| |||||   ||| | | |||| ||||||||||||||||||||||||| |||||| |||    
T  27751725 cctctccagcaagccggccctagttttccctctataggttttctcttcttaattttccattgaggggtggttttgggtcaattcttgacctgaaatcacc 27751824  T
Q  104 aaa-cttcatct---------ctttctctctat--ttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagt 190  Q
        ||||||||         |||||| |||||  |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27751825 tcctcttcatcttttttttttctttctttctatatttcaatataaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagt 27751924  T
Q  191 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaa 290  Q
    ||||||||||||||||||||| ||| || |||| | |||||||| |||| ||||| |||||||||| |||||||||||| || || |||||||| |||||    
T  27751925 gtggtggtttgttgttcgtcgccttttggggcgctatttgatttcccgtcttcttgcggtgttcatttgattcatattg-aatattgattattcgatcaa 27752023  T
Q  291 agattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||| |  | || ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||    
T  27752024 agatatgggtgtcaacgttgcagatctggaggccatagatattccggtcactttaattttatcatatatt 27752093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 42886393 - 42886646
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||  |||||||||||||||||| ||||||||| ||| ||||||||| ||||||||| ||| ||||||||||||||| ||||||||||| ||||||    
T  42886393 cttcatccttttctctctatttcaatcaaaataagtgcttttcacatagatttaggttttt-cttcgtgatttcatcatctgagtgtggtggtgtgttgt 42886491  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    ||||||||||||||||||||||||||||| |||  || || | |||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| ||    
T  42886492 tcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatcgattattcaatcaaagatttga-cgtcaa 42886590  T
Q  306 cgttgcagatccg--gaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||  || | ||||| ||||||||||| ||||||||||| |||||||    
T  42886591 cgttgcagatccgaagacggcatgg-tattccggtcaatttaattttataatatatt 42886646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 164 - 357
Target Start/End: Original strand, 10649619 - 10649809
Alignment:
Q  164 ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattc 263  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||    
T  10649619 ttttctttgtgatttcatcatctaagtgtgg---tttgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T
Q  264 atattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
     ||  |||| ||  |||||||||||||| ||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10649716 ttacagaaaaatttattattcaatcaaatatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatat 10649809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 68 - 360
Target Start/End: Complemental strand, 20257899 - 20257607
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt 166  Q
    |||| ||||| |||||||| ||||| |||||| | | | || | ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20257899 gggtagtttttggtcaatttttgacctgaaatcatccatctacttctttttctctctatttcaatctaaataagtgattttcacatagatctaggttttt 20257800  T
Q  167 t-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    | |||  | ||||   ||||| |||||||  |  ||||||||||||||||||||| | || || |||||||||| || || |||||||||| ||||||||    
T  20257799 ttcttcattattttgccatctgagtgtggcagcgtgttgttcgtcgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcat 20257701  T
Q  266 attgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||  |||||||||||||||||||||||  |||| ||||||| ||||||||||  | ||| |||||||||||||||||||||||||||||||    
T  20257700 attgaagtatcgattattcaatcaaagatttgcgcgtcaacgttgtagatccggaa-acgtgggtattccggtcactttaattttatcatatatt 20257607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 107 - 296
Target Start/End: Complemental strand, 27576515 - 27576325
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgat-ttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||    
T  27576515 cttcatccttttctctctatttcaatgtaaataagtgatattcacatagatctagattttttctttgtgatttcgtcatatgagtgtggtggtatgttgt 27576416  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattt 296  Q
    || ||  |||||||| ||||||||||||| |||| || || |||||||||| |  || |||||||||||||||||||||||||||||||||    
T  27576415 tcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatcgattattcaatcaaagattt 27576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 15570823 - 15571075
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| ||||||| || |||||||||||||  ||||||  ||||||||| |||||||||||||||||||||| ||| |  ||||||||||| |||||    
T  15570823 cttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttgtgatttcgtcacccgagtgtggtggtgtgttg 15570922  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||| ||||| ||||||||| || || |||| ||  ||||||||| |||||||||||| |||||| |||||||||||||| | ||   |||||    
T  15570923 ttcgtcgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttcatttgattcatattg-aagatctattattcaatcaaataattggacgtta 15571020  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |||||| || ||||  |||||| ||||||||||||||||||||||||    
T  15571021 acgttgcacatccgg-agtcatgtgtattccagtcactttaattttatcatatatt 15571075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 205 - 360
Target Start/End: Original strand, 4954005 - 4954160
Alignment:
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    |||||||||||||||||||||||||  ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   ||| |    
T  4954005 ttcgtcgtcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtca 4954104  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||    
T  4954105 acgttgcagattcggaggccatgaatattccggtgactttaattttatcatatatt 4954160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 116 - 287
Target Start/End: Complemental strand, 7613213 - 7613042
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    ||||||||| |||||||||||||||||| ||| || |||||||||||||||| |||  ||||||  |||||| ||||||||||| |||||||||||||||    
T  7613213 tttctctctgtttcaatctaaataagtgtttttcatatagatctaggttttt-cttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtct 7613115  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaat 287  Q
    |||||   ||||||||||||  ||| || || |||||||||| ||||||||||||||||||||||||||||||    
T  7613114 tgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgattattcaat 7613042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 11767645 - 11767859
Alignment:
Q  32 tctctctaggttttttcttcca-gattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttca 130  Q
    ||||| |||||||| ||||||| | |||||| |||   ||||||||| |||||||| ||||| | |||| | |   |||||||| ||||||| |||||||    
T  11767645 tctctttaggttttctcttccaagtttcttcattgtgtggtggttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctctatatttca 11767744  T
Q  131 atctaaataagtgattt--cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgt 227  Q
    |||||||||||||||||  ||| ||||| || ||||||| ||| ||||| ||  ||||| ||||||||||| |||||||||||||||||| ||  |||||    
T  11767745 atctaaataagtgatttttcacgtagatatatgtttttttcttcgtgatgtcgccatctgagtgtggtggtgtgttgttcgtcgtcttgtacgaagttgt 11767844  T
Q  228 ttgattttccgtatt 242  Q
    |||||||||||||||    
T  11767845 ttgattttccgtatt 11767859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 116 - 352
Target Start/End: Original strand, 42432823 - 42433058
Alignment:
Q  116 tttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    |||||||||||||||||||||| |||||| ||||| |||||| |||||||||||||||||||||| |  ||| |||| |||| | | |||||||  | |     
T  42432823 tttctctctatttcaatctaaaaaagtgaatttcatatagatttaggttttttctttgtgatttctttgtctgagtgcggtgatgtattgttcggtg-cc 42432921  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    ||| || ||||||||||| |||||| || || | || ||||| |||||| ||||| |||||| ||||||||||||| |||   | ||| |||||||||||    
T  42432922 tgtacgtcgttgtttgatattccgtcttgttcctgtattcatttgattcttattg-aagatcaattattcaatcaatgatccgaacgtcaacgttgcaga 42433020  T
Q  315 tccggaagccatggatattccggtca-ctttaattttat 352  Q
    ||| ||||||||| ||||| |||||| ||||||||||||    
T  42433021 tcc-gaagccatgaatatttcggtcatctttaattttat 42433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 10649317 - 10649428
Alignment:
Q  57 tcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacataga 155  Q
    ||||| |||| ||||| ||||||||||||||||||| |||||| |||   |||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  10649317 tcttcattgaggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacataga 10649416  T
Q  156 tctaggtttttt 167  Q
    ||||||||||||    
T  10649417 tctaggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 6445806 - 6445923
Alignment:
Q  63 ttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctagg 161  Q
    |||| ||||||||||| ||||||| || |||| |||| ||| | |||||||  ||||||||||| | ||| ||||||||||| ||| |||||||||||||    
T  6445806 ttgaggggtggttttgagtcaatttttaacttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgatttttacatagatctagg 6445905  T
Q  162 ttttttctttgtgatttc 179  Q
    ||||||||| ||||||||    
T  6445906 ttttttcttcgtgatttc 6445923  T

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Target: chr5; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 11768070 - 11768167
Alignment:
Q  260 attcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatat 359  Q
    ||||||||||||||||||||||||||||||||||||| ||||| || |||||| ||| || || ||||  ||||  ||||||||||||||||||||||||    
T  11768070 attcatattgaaagatcgattattcaatcaaagatttgagcgtcaatgttgcaaatctgg-aggcatg--tattatggtcactttaattttatcatatat 11768166  T

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Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 290
Target Start/End: Complemental strand, 19983556 - 19983336
Alignment:
Q  75 tttgggtcaattcttgacttgaaataaccaaacttca-tctctttctctctatttc-aatctaaataagtga-tttcacatagatctagg--ttttttct 169  Q
    ||||||||| || |||||||||||| ||||  ||| | | | ||||| |||||||| |||||||||| |||| ||| |||||||| ||||  | ||||||    
T  19983556 tttgggtcactttttgacttgaaatcaccactctttattttttttctttctatttcaaatctaaatacgtgattttgacatagatttagggttattttct 19983457  T
Q  170 ttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattg 269  Q
    |||||||||| |||| | ||||||| | | |||||||||||| |||||||||||||||| | |||| ||| || ||  ||||||||| || ||||| |||    
T  19983456 ttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttcatttgcttcatgttg 19983357  T
Q  270 aaagatcgattattcaatcaa 290  Q
      |||| | ||||||||||||    
T  19983356 ggagattggttattcaatcaa 19983336  T

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Target: chr5; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 6445951 - 6446036
Alignment:
Q  270 aaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcata 356  Q
    ||||||||||||||||||||||| |||   ||| |||||||||| | || ||| |||||||||||||||||||||||||||||||||    
T  6445951 aaagatcgattattcaatcaaaggtttagacgtcaacgttgcagtttcg-aagacatggatattccggtcactttaattttatcata 6446036  T

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Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 335
Target Start/End: Complemental strand, 42432243 - 42432019
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    |||||| | ||||||||| |||||||  ||| ||||||||| | ||||||||||||||||||||||| |||||||| | | |||| |||| | | |||||    
T  42432243 cttcatatttttctctctttttcaattaaaaaaagtgattt-atatagatctaggttttttctttgtaatttcatcgtttgagtgcggtgctgtattgtt 42432145  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    ||  | ||||| || ||||||||||| |||| | || ||   |||||||| |||||| || | ||||||  |||||| |||||| ||| | | ||| |||    
T  42432144 cggtg-cttgtacgtcgttgtttgatattccatcttgttcatgtgttcatttgattcctact-aaagattaattatttaatcaatgatctaaacgtcaac 42432047  T
Q  307 gttgcagatccggaagccatggatattcc 335  Q
    ||||||||||||| ||||||| |||||||    
T  42432046 gttgcagatccgg-agccatgaatattcc 42432019  T

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Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 352
Target Start/End: Complemental strand, 22978964 - 22978843
Alignment:
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    |||||||||| || || |||||||||| |||||||||||||||||   |||||| ||||||||||||  |||| ||| |||||||| | | || |||||     
T  22978964 gattttccgttttgttgcggtgttcatttgattcatattgaaagaaaaattattaaatcaaagatttgggcgtcaacattgcagattctg-aggcatggg 22978866  T
Q  330 tattccggtcactttaattttat 352  Q
    |||| |||||||||| |||||||    
T  22978865 tatttcggtcactttcattttat 22978843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 1582287 - 1582159
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||| | |||||||| |||| |||||||||||||||||| ||| ||||||||| ||||| ||  ||||||||||| | | |||| |  | | ||| ||    
T  1582287 cttcatatttttctctccattttaatctaaataagtgattttcacgtagatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 1582189  T
Q  206 tcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    | ||||||||||||||||||||||||||||    
T  1582188 ttgtcgtcttgtgcggcgttgtttgatttt 1582159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 1602528 - 1602656
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||| | |||||||| |||| |||||||||||||||||| ||| ||||||||| ||||| ||  ||||||||||| | | |||| |  | | ||| ||    
T  1602528 cttcatatttttctctccattttaatctaaataagtgattttcacgtagatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtcgt 1602626  T
Q  206 tcgtcgtcttgtgcggcgttgtttgatttt 235  Q
    | ||||||||||||||||||||||||||||    
T  1602627 ttgtcgtcttgtgcggcgttgtttgatttt 1602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 30298951 - 30299012
Alignment:
Q  299 gcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  30298951 gcgtcaacattgcagatctggatgccatggatattctggtcactttaattttatcatatatt 30299012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 6012269 - 6012213
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  6012269 tttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 6012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 320
Target Start/End: Original strand, 28097028 - 28097278
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtt-tt 165  Q
    ||||||||||| ||||||| ||||| |||| | ||| | |||||||| |||| ||| |||||||| ||||||||||| ||||||||| || |||||| ||    
T  28097028 gggtggttttgtgtcaatttttgacctgaattcacccatcttcatct-tttcgctcaatttcaatataaataagtgattttcacataaatttaggttatt 28097126  T
Q  166 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    |||||  ||||||| |  | | ||| |  || | ||||| | ||||| |||||||| ||||||||||||  ||| ||| || ||||||||| || ||||     
T  28097127 ttcttcatgatttcgttgtatgagtataatgttgtgttggttgtcgttttgtgcggtgttgtttgatttctcgtcttcctatggtgttcatttggttcac 28097226  T
Q  266 attgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgga 320  Q
     |||||||||||    ||||||||| ||||| | ||| ||| | |||||||||||    
T  28097227 gttgaaagatcg---gttcaatcaatgatttgaacgtcaacatagcagatccgga 28097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 11192242 - 11192392
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttt 166  Q
    ||||||||||||||||||| ||||| |||||| ||| |  || |||| ||| ||||||| |||| |||||||||||| ||||||  ||||||| ||||||    
T  11192242 gggtggttttgggtcaatttttgacctgaaatcacctatattaatctttttgtctctatatcaa-ctaaataagtgattttcacgcagatctaagttttt 11192340  T
Q  167 t-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt 217  Q
    | ||| |||| ||| || | | ||||||||| | ||||||| ||||||||||    
T  11192341 tccttcgtgagttcgtcgtttgagtgtggtgttgtgttgtttgtcgtcttgt 11192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 1697021 - 1696923
Alignment:
Q  118 tctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    |||| |||||||||||||||||||||| |||||||||||||||  |||| ||||||||||| || || |||||||||| ||   |||||||||| ||||    
T  1697021 tctcactatttcaatctaaataagtgattttcacatagatctatattttattctttgtgatctcttcgtctaagtgtgatgtcatgttgttcgttgtct 1696923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 14082556 - 14082448
Alignment:
Q  124 tatttcaatctaaataagtga-tttcacatagatctaggtttt------ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttg 216  Q
    ||||||||||||||||||||  ||||||||| ||| || ||||      || |||||||||||||| ||||||||||| | | |||||||||||||||||    
T  14082556 tatttcaatctaaataagtggctttcacatatatcaagtttttcttatattttttgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttg 14082457  T
Q  217 tgcggcgtt 225  Q
    | |||||||    
T  14082456 tacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 14211134 - 14211242
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||||| |||||| ||| || |||| | || |||||||| || ||| |||| |    | |||||||||||||||||||||||||    
T  14211134 tttcaatctaaataagtgattttcacatacatcaagtttttat-ttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgt 14211232  T
Q  225 tgtttgattt 234  Q
    ||||||||||    
T  14211233 tgtttgattt 14211242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 19100708 - 19100552
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    |||| ||||| |||||||||| ||||||| | |||   || ||  |||||||||||| |||||| ||||||||||  | |||||||||||| ||||| |     
T  19100708 tgttattcgttgtcttgtgcgacgttgttcggtttcttgtcttggtacggtgttcatttgattcctattgaaagagtggttattcaatcaatgatttgaa 19100609  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    | | |||||| ||||| |  ||| ||||  |||||| |||||||||||||||||||||    
T  19100608 catcaacgttccagat-cttaagacatgagtattccagtcactttaattttatcatat 19100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 28541013 - 28540979
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  28541013 tgttgttcgtcgtcttgtgcggcgttgtttgattt 28540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 24229915 - 24229866
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||||    
T  24229915 tttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgtg 24229866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 9113856 - 9113800
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  9113856 tttgtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtt 9113800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 13007186 - 13007242
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  13007186 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 13007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 38597754 - 38597810
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||||||||    
T  38597754 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 38597810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 41418669 - 41418633
Alignment:
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41418669 catggatattccgctcactttaattttatcatatatt 41418633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 275
Target Start/End: Complemental strand, 10332651 - 10332576
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||| ||||||||||||||| |||||||||||  ||| || || | |||||  | ||||||||||||||||||    
T  10332651 tgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14726592 - 14726541
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcg 220  Q
    ||||||||||| || |||||||| |||| | |||||||||||||||||||||    
T  14726592 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcg 14726541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 19103574 - 19103540
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||| |||||||||||||||||||||||||||    
T  19103574 tgttgttagtcgtcttgtgcggcgttgtttgattt 19103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 19349682 - 19349716
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||| ||||||||    
T  19349682 tgttgttcgtcgtcttgtgcggcgttatttgattt 19349716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 39567283 - 39567317
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||| ||||||||||||||||||||||||    
T  39567283 tgttgttcgttgtcttgtgcggcgttgtttgattt 39567317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 2979413 - 2979384
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||||||||||||||||||||    
T  2979413 tgttgttcgtcgtcttgtgcggcgttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 6216978 - 6217053
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||| |||||  |||| |||||||||||| |||||| ||||  |||| |||| |||| |||||||||||||    
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaag-catgtgtatttcggtgacttaaattttatcatat 6217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 13421890 - 13421942
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 221  Q
    ||||||||||  || |||||||||| || | ||||||||||||||||||||||    
T  13421890 tttgtgattttttcgtctaagtgtgatgttgtgttgttcgtcgtcttgtgcgg 13421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 25980115 - 25980171
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||| |||| || |||||||| |||  | ||||||||||||||||||||||||||    
T  25980115 tttgtggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtcttgtgcggcgtt 25980171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 26825387 - 26825443
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||| ||||||||||||||    
T  26825387 tttgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcttcttgtgcggcgtt 26825443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 35921004 - 35920929
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||| ||||| | ||| ||||||||||||||||||| ||| |||||||  || | ||| ||||||||||||    
T  35921004 attcaatcaatgatttgaacgtcaacgttgcagatccggaag-catcgatattctagtgattttgattttatcatat 35920929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 51871677 - 51872033
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||    |||||||||||||||||| |||||  | |||||| |||  ||||||||||||||||||||||||| | |||| |||    
T  51871677 cctctccaacaagtcggccctaattttctctctctaggttttctcttctcgtttcttcattgg-gggtggttttgggtcaattcttgacctaaaatcacc 51871775  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51871776 cctcttcatctttttctctctatttcaatctaaataagtgactttcacatagatctagcttttttctttgtgatttcatcatctaagtgtggtggtttgt 51871875  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||| ||||||||| |||||||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||| |||| | |||    
T  51871876 tgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaatatttgaacgt 51871975  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  51871976 caacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatt 51872033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 69 - 356
Target Start/End: Original strand, 28035016 - 28035305
Alignment:
Q  69 ggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt-t 166  Q
    |||||||||||||||||| ||||| |||||| ||  | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  28035016 ggtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctctctatttcaatctaaataagtgattttcacatagatctaggtttttt 28035115  T
Q  167 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||||    
T  28035116 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcata 28035215  T
Q  267 ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcata 356  Q
    ||||||||||||||||||||||||||||||  |||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  28035216 ttgaaagatcgattattcaatcaaagatttgggcgtcaacattgcagatccggaggccatgaatattccggtcactttaattttatcata 28035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 45426331 - 45425977
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||| || ||||||||||  | ||| |||||||||||||| | |||||| |||||| |||| ||| ||||||||||||||||||||| ||||||| |||    
T  45426331 ctctcgaaaaagccggccctggttttttctctctaggttttcttttccagtttcttcattgagggggtggttttgggtcaattcttgatttgaaatcacc 45426232  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     |  ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||   ||||||||||||||||||||||||||||||||    
T  45426231 tattttcatctttttctctctatttaaatctaaataagtgattttcacatagatctaagtttttt---tgtgatttcatcatctaagtgtggtggtttgt 45426135  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||||||||||||||||| || |  || | |||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||    
T  45426134 tgttcgtcgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattcatatcgaaagatcgattattcaatcaaaaatttgagcgt 45426035  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||    
T  45426034 caacgttgcagatccgaaggccatgaatatttcggtcactttaattttatcatatatt 45425977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 51868890 - 51868556
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||| |||||||| |||||| | |||||| |||  |||||||||||||| |||||||||| |||||| |||   |||||||| ||||||||||||    
T  51868890 tttctctctttaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatt 51868791  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51868790 tcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 51868691  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||| |||  ||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||  |||    
T  51868690 gtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatctggagacca 51868591  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    || |||||||| | |||||||||||||||||||||    
T  51868590 tgaatattccgatgactttaattttatcatatatt 51868556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 360
Target Start/End: Original strand, 14545340 - 14545687
Alignment:
Q  12 acaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttca 111  Q
    ||||||||||||  | |||||||||||||||||| ||||| ||||| | | | ||  |||||||||| ||||||||||||| |||||| ||  | |||||    
T  14545340 acaagccggccctagttttctctctctaggttttctcttctagattttccatcgagcggtggttttgtgtcaattcttgacctgaaatcactcatcttca 14545439  T
Q  112 tctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 210  Q
    ||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14545440 tctttttctctatatttcaatctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 14545539  T
Q  211 gtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttg 310  Q
    |||||||||| || ||||||| || |||| ||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||  |||| |||||||    
T  14545540 gtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttcatctgatttattttg-aagatcgattattcaatcaaagatttgggcgtcaacgttg 14545637  T
Q  311 cagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| ||||||  ||||||| ||| |||||||||||||||||||    
T  14545638 cagatccggaggccatgagtattccgatcattttaattttatcatatatt 14545687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 7342534 - 7342892
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||    |||||||||||||||||| |||||| | |||||| |||  ||||||||||||||||||| ||||| |||||| |||    
T  7342534 cctctccaataagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaatttttgacctgaaatcacc 7342633  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttg 201  Q
       |||||| | ||| | ||||||||||||||||||||||| ||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7342634 cctcttcatatttttttatctatttcaatctaaataagtgacttttacgtagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttg 7342733  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||| || ||||||| | |||| ||||||||||||||||||||||||||||||||   ||    
T  7342734 ttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattcaatcaaagatttggacg 7342833  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  7342834 tcaacgttgcagatccggagaccatggatattccggtgactttaattttatcatatatt 7342892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 25406529 - 25406195
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||| |||||| |||||||||||| | |||||| |||  ||||| ||||||||||||||||||| |||||| ||    |||||||| ||||||||||||    
T  25406529 tttctttctctaagttttttcttcccgtttcttcattggggggtgattttgggtcaattcttgacctgaaatcacacctcttcatctttttctctctatt 25406430  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  25406429 tcaatctaaataagtgactttcacatagatctaggtttttttctttgtgatttcgtcatctaagtgtggtggtttattgttcgtcgtcttgtgtggcgtt 25406330  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   ||| |||||||||||||| || | ||    
T  25406329 gtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgttgcagatccagaggtca 25406230  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| |||||||||||||||||||||    
T  25406229 tggatattccggtgactttaattttatcatatatt 25406195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 360
Target Start/End: Complemental strand, 40881256 - 40880924
Alignment:
Q  30 tctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttc 129  Q
    |||||||||||||||| |||| | | |||||| |||| || |||||||||||||||||||||| | |||| ||  | |||||||| ||||||||||||||    
T  40881256 tctctctctaggttttctcttaccgtttcttcattgagggatggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctctctatttc 40881157  T
Q  130 aatctaaataagtgattt-cacatagatctaggttttttctttgtga--tttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    ||||||||| |||||||| ||| |||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881156 aatctaaatgagtgattttcacttagatctaggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 40881057  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| ||| | |||||||||| ||||||||||| ||| |||||||||||||||||||||||  |||| ||||||||||||||| | |||||    
T  40881056 tttgatttcccgtcttcgtgcggtgttcatttgattcatatt-aaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggccat 40880958  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |||||||||||||||||||||||||    
T  40880957 ggatattctggtcactttaattttatcatatatt 40880924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 5324802 - 5324469
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| |||| ||||| || |||||| |||| || || ||||||||||||||||||| || ||| |||   |||||||| ||||||||||||    
T  5324802 tttctctctctagattttctcttcaagtttcttcattgagggatgattttgggtcaattcttgacctggaatcacctctcttcatctttttctctctatt 5324703  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||||||| ||| || || || |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  5324702 tcaatctaaataagtgattttcacgtaaatttaagtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttgtgcggtattg 5324603  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| || || |||||||||| ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||  |||||    
T  5324602 tttgatttcccgtctttttgcggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgggggccat 5324503  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  5324502 ggatatttcggtcactttaattttatcatatatt 5324469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 35584866 - 35584529
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||| |||||||||||| |||| ||  |||||| |||| ||||| |||||||||||||||| || |||||| ||  | |||||||| ||||||| ||||    
T  35584866 tttctttctctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattcttaacctgaaatcactcatcttcatctttttctctttatt 35584767  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt----ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    |||||||||||||||||||| ||||||||||||||||||||    |||||| |||| || |||||||||||||| |||||||||||||||||||||||||    
T  35584766 tcaatctaaataagtgattttcacatagatctaggttttttttttctttgtaattttataatctaagtgtggtgatttgttgttcgtcgtcttgtgcggc 35584667  T
Q  223 gttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaag 322  Q
    ||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||| ||||  |||| |||||||||||||||||      
T  35584666 gttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagatccggagc 35584567  T
Q  323 ccatggatattccggtcactttaattttatcatatatt 360  Q
    | ||||||||||||||||||||||||| ||||||||||    
T  35584566 caatggatattccggtcactttaatttcatcatatatt 35584529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 5701069 - 5701429
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||  | |||||||||||| ||||| |||| ||  |||||  |||| |||||  ||||||||||| |||||| |||||| |||    
T  5701069 cctctccaataagccggccctagttttctctctctaagttttctcttacaatttctttattgaggggtgactttgggtcaatacttgacctgaaatcacc 5701168  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt---ttctttgtgatttcatcatctaagtgtggtggtt 199  Q
       |||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||| ||    
T  5701169 cctcttcatctttttctctttatttcaatttaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatt 5701268  T
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||| ||||||| |||||||||||||||  |    
T  5701269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattgttcaatcaaagatttggg 5701368  T
Q  300 cgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | | |||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  5701369 catcaacgttgcagatccggagacaatggatattccggtcactttaatttcatcatatatt 5701429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 9172307 - 9172660
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||||||||||    |||||||| ||| ||||| || |||   |||||| |||  ||||||||||||||||||||||||| |||||| |||   ||||    
T  9172307 aacaagccggccctaattttctctcactaagttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatcacccctcttc 9172406  T
Q  111 atctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtg--atttcatcatctaagtgtggtggtttgttgtt 206  Q
    || | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  9172407 atatttttttctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgtt 9172506  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    |||||||||||||||||||||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   ||| |||    
T  9172507 cgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaac 9172606  T
Q  307 gttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  9172607 gttgcagatccggaggccatagatattccggtgactttaattttatcatatatt 9172660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 9180289 - 9180642
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||||||||||    |||||||| ||| ||||| || |||   |||||| |||  ||||||||||||||||||||||||| |||||| |||   ||||    
T  9180289 aacaagccggccctaattttctctcactaagttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatcacccctcttc 9180388  T
Q  111 atctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtg--atttcatcatctaagtgtggtggtttgttgtt 206  Q
    || | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  9180389 atatttttttctctatttcaatctaaataagtgactttcacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgtt 9180488  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaac 306  Q
    |||||||||||||||||||||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   ||| |||    
T  9180489 cgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaac 9180588  T
Q  307 gttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  9180589 gttgcagatccggaggccatagatattccggtgactttaattttatcatatatt 9180642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 30 - 360
Target Start/End: Original strand, 11453773 - 11454105
Alignment:
Q  30 tctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctct--att 127  Q
    |||||||||||||||| |||| ||| |||||| |||| || ||||||  |||||||| |||||||||||| ||    |||||||| |||||||||  |||    
T  11453773 tctctctctaggttttctctttcagtttcttcattgagggatggtttctggtcaatttttgacttgaaatcactct-cttcatctttttctctctctatt 11453871  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttg 226  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  11453872 tcaatctaaataagtggttttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctg 11453971  T
Q  227 tttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccat 326  Q
    |||||||| |||| || || |||| ||||| |||||||| |||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||| | |||    
T  11453972 tttgatttcccgtctttttgcggtattcatttgattcatcttgaaagagcgattattcaatcaaagatttgagcgtcaacattgcagatccggaggtcat 11454071  T
Q  327 ggatattccggtcactttaattttatcatatatt 360  Q
     ||||||| |||||||||||||||||||||||||    
T  11454072 agatattctggtcactttaattttatcatatatt 11454105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 33291687 - 33291329
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||| ||||||| ||||||  | ||||| ||||||| |||||||||  || || ||| |||| ||||||||||||||||||||||||| |||||| |||     
T  33291687 ctcttcaacaagtcggccctagttttctttctctagattttttcttatagttttttcattgaggggtggttttgggtcaattcttgacctgaaatcaccc 33291588  T
Q  105 aacttcatctcttt-ctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttg 201  Q
      |||||| | ||| || ||||||||||| |||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  33291587 ctcttcattttttttctttctatttcaatataaataagtgattttcacataaatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttg 33291488  T
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcg 301  Q
    |||||||||||||||||||| |||||||||||||||||  || | |||||||||| ||||||||||||||||||   | ||||||||||||||||  |||    
T  33291487 ttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcg 33291388  T
Q  302 ttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  33291387 tcaacgttgcagattcggaggcgatggatattccggtcactttaattttatcatatatt 33291329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 30 - 360
Target Start/End: Complemental strand, 30818588 - 30818262
Alignment:
Q  30 tctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttc 129  Q
    |||||||||| ||||| | || ||| |||||| |||| |||| |||||||||||||| ||||| |||||| ||| | |||||||| ||||||||||||||    
T  30818588 tctctctctaagttttcttttacagtttcttcattgaggggtagttttgggtcaattattgacctgaaatcacccatcttcatctttttctctctatttc 30818489  T
Q  130 aatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtt 228  Q
    |||||||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||    
T  30818488 aatctaaataagtgattttcacataaatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt-----gttgtt 30818394  T
Q  229 tgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgg 328  Q
    |||| | ||||  |  | |||||||||| |||||| ||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||  ||||||     
T  30818393 tgatctcccgtcattgtgcggtgttcatttgattcttatcgaaagatcgattattcaatcaaagatttaggcgttaacgttgtagatccggtggccatga 30818294  T
Q  329 atattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||    
T  30818293 atattccggtcactttaattttatcatatatt 30818262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 50166367 - 50166010
Alignment:
Q  4 cctctccaacaagccggcccacgattt-ctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataac 102  Q
    |||||||||||||||| ||||  |||| ||||||||||||||| |||||| | |||||| |||  ||||||||||||||||||| ||||| ||||||  |    
T  50166367 cctctccaacaagccg-cccataattttctctctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattattgacctgaaattgc 50166270  T
Q  103 caaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggttt 200  Q
    |   ||| |||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  50166269 ccctctttatctttttctatctatttcaatctaaataagtgaatttcacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggttt 50166170  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    ||||||||||||||||||||||||| |||| |||  ||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   |    
T  50166169 gttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggac 50166070  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||| ||||||||| ||||||| ||||| ||| |||||||||||||||||||||    
T  50166069 gtcaacgttgtagatccggaggccatgggtattctggtgactttaattttatcatatatt 50166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 56 - 360
Target Start/End: Complemental strand, 50272357 - 50272051
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| |||    ||||||| ||||||| ||||||||||||||||||| |||| |||||||    
T  50272357 ttcttcattgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataagtaattttcacatag 50272258  T
Q  155 atctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgtt 253  Q
    ||||| ||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||| ||| | |||||||    
T  50272257 atctaagtttttttctttgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgtt 50272158  T
Q  254 catctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatc 353  Q
    ||| ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||| || ||| ||||||| |||||||||||||| ||    
T  50272157 catttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccagtcactttaattttgtc 50272058  T
Q  354 atatatt 360  Q
    |||||||    
T  50272057 atatatt 50272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 116 - 360
Target Start/End: Original strand, 34519057 - 34519298
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  34519057 tttctctctatttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgttt 34519156  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    ||||||||||||||||||||  ||| |||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||    |   ||||||||||    
T  34519157 tgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaatcaacgattt----ggacacgttgcaga 34519252  T
Q  315 tccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  34519253 tccggaggccatggatattccggtcactttaattttatcatatatt 34519298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 19716165 - 19715806
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||| ||||||| ||||||  | ||||||||| ||||||||||||| ||  |||||| ||||  |||||||||||||||||||||||  |||||| |||    
T  19716165 cctcttcaacaagtcggccctagttttctctctttaggttttttcttacaatttcttcattgagaggtggttttgggtcaattcttgatctgaaatcacc 19716066  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttcttt----gtgatttcatcatctaagtgtggtggt 198  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||    || |||||||||||||||||||||| |    
T  19716065 ct-cttcatctttttctctttatttcaatctaaataagtgattttcacatagatttaggttttttttttcattgtaatttcatcatctaagtgtggtgat 19715967  T
Q  199 ttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagatttta 298  Q
    | ||||||||||||||||||| |||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||      
T  19715966 t-gttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgg 19715868  T
Q  299 gcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||| |||||||||||||  || || ||||||||||||||||||||||||| ||||||||||    
T  19715867 gcgtcaacgttgcagatctagaggcaatggatattccggtcactttaatttcatcatatatt 19715806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 360
Target Start/End: Complemental strand, 38520773 - 38520446
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaat 132  Q
    |||||||||||| |||| ||| |||||| || | ||| ||||||||| |||||| || || |||||| ||  | |||||||| |||||||||||||| ||    
T  38520773 tctctaggttttctctttcagtttcttcattaagggggtggttttggatcaattttttacctgaaatcactcatcttcatctttttctctctatttcgat 38520674  T
Q  133 ctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc---ttgtgcggcgttgtt 228  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||   ||||| |||||||||    
T  38520673 ctaaataagtgattttcacatagatctatgttttttcttcgtgatttcatcatctaagagtggtggtttgttgttcgtcgtcgtcttgtgtggcgttgtt 38520574  T
Q  229 tgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgg 328  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||  |||| |||||||||||| ||| || |||||    
T  38520573 tgatttcccgtattcttacggtgttcatctgattcatattgaaagatcgattattaaatcaaa---ttgtgcgtcaacgttgcagattcgg-aggcatgg 38520478  T
Q  329 atattccggtcactttaattttatcatatatt 360  Q
    ||||||| ||||||||||||||||| ||||||    
T  38520477 atattccagtcactttaattttatcgtatatt 38520446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 32 - 358
Target Start/End: Complemental strand, 18569551 - 18569224
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||||||| |||||| |||| ||||||||||||||||||| |||||  ||||| |||   |||||||| ||||||||||||||||    
T  18569551 tctctctaggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctctctatttcaa 18569452  T
Q  132 tctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||| |||| | ||||||||||| ||||||||||| |||||| ||| ||||||     
T  18569451 tctaaataagtgattttcacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgtta 18569352  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    ||||| |||| || || |||||||||| | ||||||||||||||||||||||||||||  |||||||  | || |||||||||||||| | || |||||     
T  18569351 gatttcccgtcttgttgcggtgttcatttaattcatattgaaagatcgattattcaattgaagatttgggtgtcaacgttgcagatccag-aggcatggg 18569253  T
Q  330 tattccggtcactttaattttatcatata 358  Q
    |||||||||||||||||||||||||||||    
T  18569252 tattccggtcactttaattttatcatata 18569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 7997663 - 7997959
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt- 165  Q
    |||||||||||||| |||| ||||  |||||| |||   |||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||     
T  7997663 gggtggttttgggttaatttttgatctgaaatcacccttcttcatctttttctctttatttcaatataaataagtgattttcacatagatctaggttttt 7997762  T
Q  166 --ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattc 263  Q
      |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| | | |||||||| ||||||    
T  7997763 ttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattc 7997862  T
Q  264 atattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||| ||||||| ||||| |||||||||  |||| ||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||    
T  7997863 atattgaaatatcgattgttcaaccaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccggtcactttaatttcatcatatatt 7997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 67 - 360
Target Start/End: Original strand, 27872614 - 27872907
Alignment:
Q  67 cgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt 165  Q
    |||||||||||||||||||| ||||| |||||| ||| | |||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  27872614 cgggtggttttgggtcaatttttgacatgaaatcacccatcttcatctttttcgctctatttcaatctaaataagtgattttcacatagatctaagtttt 27872713  T
Q  166 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  || ||||| |||||||||| | |||||     
T  27872714 ttcttcgtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaa 27872813  T
Q  266 attgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||| ||||||||||||||| |||||||| ||||| ||||||| |||| |||||| | || |||||||  ||| |||||||||||||||||||    
T  27872814 attgaaggatcgattattcaattaaagatttgagcgtcaacgttgtagat-cggaaggcgtgaatattccaatcattttaattttatcatatatt 27872907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 30878939 - 30879245
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| ||||||||||||||||||| ||||| ||| || | |   |||||||| ||||||| ||||| |||||||||||||||||| |||||||    
T  30878939 ttcttcattgaggggtggttttgggtcaatttttgacctgagatcatctctcttcatctttttctctttattttaatctaaataagtgattttcacatag 30879038  T
Q  155 atctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    ||||| |||||||  |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||    
T  30879039 atctatgttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgt 30879137  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||  |||| |||||||||||| |||| || |||||||||||| |||||||||||| ||    
T  30879138 tcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagattcggaggcaatggatattccgatcactttaatttcat 30879237  T
Q  353 catatatt 360  Q
    ||||||||    
T  30879238 catatatt 30879245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 9919304 - 9919559
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttc-acatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  9919304 cttcatctttttctctctatttcaatctaaataagtgatttttacatagatctatgtttttttctttgtgatttcaccatctaagtgtggtggtttgttg 9919403  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||||| |||||||||||| ||| |||| ||||| |||||||||| | |||| |||||||||||||||||||||||||||||||| | ||| |    
T  9919404 ttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgaacgtca 9919503  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | |||||| ||||||| |||||| |||||||||| |||||||||| ||||||||||    
T  9919504 atgttgcaaatccggaggccatgaatattccggtgactttaatttgatcatatatt 9919559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 50148208 - 50148540
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| |||| ||||  |  |||||| |||| ||||||||||||||||||||| ||  |||||| | | | |||||||  ||||||| ||||    
T  50148208 tttctctctctagattttctcttataatttcttcattgaggggtggttttgggtcaattctagatctgaaatcatccatcttcatccttttctctttatt 50148307  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttttt---ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    | |||||||||||||||||| ||||||||||||||||||||   |||||| |||||||| ||||||||||||| ||||||||    ||||||||||| |     
T  50148308 ttaatctaaataagtgattttcacatagatctaggtttttttttctttgtaatttcatcttctaagtgtggtgatttgttgt----cgtcttgtgcgaca 50148403  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagc 323  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| ||||||||||||| |  |||| ||||||||||||||||||||    
T  50148404 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatgtgggcgtcaacgttgcagatccggaagc 50148503  T
Q  324 catggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||||||||||| ||||||||||    
T  50148504 aatggatattccggtcactttaatttcatcatatatt 50148540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 68 - 358
Target Start/End: Original strand, 20266178 - 20266470
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt- 165  Q
    ||||||||||||||||||||||||  | |||| ||| | |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||     
T  20266178 gggtggttttgggtcaattcttgatctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctagcttttt 20266277  T
Q  166 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| |||| ||| | |||||  ||| ||||||||    
T  20266278 ttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattcat 20266377  T
Q  266 attgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatata 358  Q
    ||||||||||||||| |||||||||||||||  || | |||||||||||| |||| || |||||| |||| ||||||||||||| ||||||||    
T  20266378 attgaaagatcgattgttcaatcaaagatttgggcatcaacgttgcagattcggaggcaatggatgttccagtcactttaatttcatcatata 20266470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 107 - 360
Target Start/End: Original strand, 39987305 - 39987558
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||||| |||||||||  |||||||||||||||||||||  || |||||||||| ||||||||| ||||||||| ||||  ||||||||||| | |||    
T  39987305 cttcatctttttctctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtgtggtggtgtattg 39987403  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtta 304  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||| ||  |||| |    
T  39987404 ttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcgtca 39987503  T
Q  305 acgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  39987504 acgttgcagatccgg-aggcatgggtattccggtcactttaattttatcatatatt 39987558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 108 - 360
Target Start/End: Original strand, 3871325 - 3871578
Alignment:
Q  108 ttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    ||||||| | |||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3871325 ttcatctttctctctcaatttcaatctaaataagtgattttcacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 3871424  T
Q  207 cgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata-ttgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    ||||||||||||| |||||||||||||| |||| ||||| |||||||| | ||||| ||| ||||||||||||||||||||||||||||||  | || ||    
T  3871425 cgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttatatttgaaagatcgattattcaatcaaagatttgggtgtcaa 3871523  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| || | |||| ||||| |||||||| |||||||| ||||||||    
T  3871524 cgttgcagatccagaggtcatgtatatttcggtcactataattttaacatatatt 3871578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 131 - 359
Target Start/End: Original strand, 31836745 - 31836975
Alignment:
Q  131 atctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgt 227  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31836745 atctaaataagtgattttcacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgt 31836844  T
Q  228 ttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatg 327  Q
    ||||||| |||| ||| | |||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||| |||| ||| |||    
T  31836845 ttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccgg-agcaatg 31836943  T
Q  328 gatattccggtcactttaattttatcatatat 359  Q
    |||||||||||||||||||||| |||||||||    
T  31836944 gatattccggtcactttaatttcatcatatat 31836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 107 - 360
Target Start/End: Complemental strand, 9687382 - 9687116
Alignment:
Q  107 cttcatctctttctctctatttcaat----ctaaataagtgattt-cacatagatctaggtttttt----------ctttgtgatttcatcatctaagtg 191  Q
    |||||||| |||||||||||||||||    ||||||||||||||| ||||||||| ||||||||||          ||||||||||||||||||||||||    
T  9687382 cttcatct-tttctctctatttcaattaatctaaataagtgattttcacatagatataggtttttttgtttttattctttgtgatttcatcatctaagtg 9687284  T
Q  192 tggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaa 291  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || | ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  9687283 tggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaa 9687184  T
Q  292 gattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||  |||| || ||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  9687183 gatttgggcgtcaa-gttgcagatccagaggccatgaatattccggtcactttaattttatcatatatt 9687116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 19723176 - 19723382
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctcttt-ctctctatttcaat 132  Q
    |||||||||||| ||||  || |||||| |||| ||||||||||||||||||| |||||||||||| |||   |||||| | ||| ||||||||| ||||    
T  19723176 tctctaggttttctcttatagtttcttcattga-gggtggttttgggtcaattattgacttgaaatcacctctcttcatattttttctctctatt-caat 19723273  T
Q  133 ctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19723274 ctaaataagtgattttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttg 19723373  T
Q  231 attttccgt 239  Q
    |||||||||    
T  19723374 attttccgt 19723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 42 - 360
Target Start/End: Complemental strand, 7312329 - 7312017
Alignment:
Q  42 ttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataag 141  Q
    |||||| |||||| |||||| |||| |||| |||||||||||||| ||||| | |||| ||    |||||||| ||||||||||||||||  |||||||     
T  7312329 tttttttttccagtttcttcattgaggggtagttttgggtcaatttttgacctaaaattacttctcttcatctttttctctctatttcaaattaaataaa 7312230  T
Q  142 tgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgta 240  Q
    |||||| ||| ||||||||||||||||||| |||||||| | |||||||||||||||| |||||||| | ||||||||     ||||||||||||||||     
T  7312229 tgattttcacgtagatctaggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgttgttcattgtcttgtg-----ttgtttgattttccgtc 7312136  T
Q  241 ttcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtca 340  Q
    || || |||||||||| |||||||||||||||||||||| |||||| |||||||||   ||| ||| ||||||||||||  | ||||  |||| ||||||    
T  7312135 ttgttgcggtgttcatttgattcatattgaaagatcgataattcaaacaaagatttggacgtcaacattgcagatccggttg-catgagtatttcggtca 7312037  T
Q  341 ctttaattttatcatatatt 360  Q
    ||||| ||||||||||||||    
T  7312036 ctttagttttatcatatatt 7312017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 40646500 - 40646844
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||  | |||||||||||||||||| |||| ||  |||||| |||| ||||||||||||||||||||||||| | |||| ||     
T  40646500 cctctccaacaagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctaaaatcact 40646599  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctagg--ttttttctttgtgatttcatcatctaagtgtggtggttt 200  Q
     | |||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||||  |||||||||||| ||||||||||||||||||| ||        
T  40646600 catcttcatctttttctatttatttcaatctaaataagtgattttcacgtagatctaggttttttttctttgtaatttcatcatctaagtgtgttg---- 40646695  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa----gatcgattattcaatcaaagattt 296  Q
                   | | ||||||||||||||| |||| ||| | ||||||| || |||||||||||||||    |||||||| |||||||||||||||    
T  40646696 ---------------ggggggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatcgatcgattgttcaatcaaagattt 40646780  T
Q  297 tagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
      |||| ||||||||||||||||| || |||||||||| ||||||| |||||| ||||||||||    
T  40646781 gggcgtcaacgttgcagatccggaggcaatggatattctggtcactataatttcatcatatatt 40646844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 67 - 360
Target Start/End: Complemental strand, 48365957 - 48365677
Alignment:
Q  67 cgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggttttt 166  Q
    |||||||||||||||||||| ||||  |||||| ||| | |||||||| ||||||||| |||||| |||||            || ||||||||||||||    
T  48365957 cgggtggttttgggtcaatttttgaaatgaaatcacctatcttcatctttttctctctgtttcaaactaaa------------cagagatctaggttttt 48365870  T
Q  167 tctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcata 266  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||| ||||||||  ||||||||||||||  || || |  |||||||||| |||||||||    
T  48365869 tcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcata 48365770  T
Q  267 ttgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| |||||||||||||||||||||||| | ||| |||||||||||||||| || |||   ||||||| | |||||||||||||||||||||    
T  48365769 ttgaaggatcgattattcaatcaaagatttgaacgtcaacgttgcagatccgggag-cataagtattccgattactttaattttatcatatatt 48365677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 45806055 - 45805739
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctat 126  Q
    ||||||||||||| |||| |||||| | |||||  |||  ||| |||||||||||||||| ||||  |||||| |||   |||| ||| |||||||||||    
T  45806055 tttctctctctagattttctcttcccgtttctttattgggggggtggttttgggtcaatttttgatctgaaatcacctttcttcctctttttctctctat 45805956  T
Q  127 ttcaatctaaataagtga-tttcacatagatctaggttttttctttgtga-tttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||| ||||||||| |||||  |         |||| |||||||||||||||||||||||||||||||||||||                
T  45805955 ttcaatctaaataagtgactttcacataaatctaaataa-------gtgactttcatcatctaagtgtggtggtttgttgttcgtcgt------------ 45805875  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||| ||| |||| ||||| |||||||||| | ||||  ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||    
T  45805874 tgtttgctttcccgtcttcttgcggtgttcatttcattccgattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatccggaggcc 45805775  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| |||||||||||||||||||||    
T  45805774 atggatattccggtgactttaattttatcatatatt 45805739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 41081946 - 41081615
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttggg-tcaattcttgacttgaaataaccaaacttcatctctttctc-tctatttc 129  Q
    |||||||| |||||||| || || |||||||||   ||||||||||||| |||||| ||||| |||||| ||  | |||||||| |||||  || |||||    
T  41081946 tctctctaagttttttcatctagtttcttcgttatggggtggttttggggtcaatttttgacctgaaatcactcatcttcatctttttctagtccatttc 41081847  T
Q  130 aatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtt 228  Q
    |||||| ||||||||||| | ||||||||||||||||||| | |||| ||| |||||  ||||||||||| |||||||| ||| ||||||||||||||||    
T  41081846 aatctatataagtgatttgcgcatagatctaggttttttcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgttgtt 41081747  T
Q  229 tgattttccgtattcttacggtgttcatctgattcatattg-aaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatg 327  Q
    | ||||   |  || || | |||||||| |||||||||||| |||||||||||||||||||||| || | ||| | || ||||||||||||| || ||||    
T  41081746 taatttcatgccttgttgcagtgttcatatgattcatattgaaaagatcgattattcaatcaaaaatctgagcatcaatgttgcagatccgg-aggcatg 41081648  T
Q  328 gatattccggtcactttaattttatcatatatt 360  Q
      ||||| ||||| |||||||||||||||||||    
T  41081647 tgtattctggtcattttaattttatcatatatt 41081615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 68 - 296
Target Start/End: Original strand, 44637298 - 44637527
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttc-tctctatttcaatctaaataagtgattt-cacatagatctaggtttt 165  Q
    ||||||||||||||||||| ||||| | |||| |||   |||||||| |||  ||| |||||||||||||||||||||||| ||| |||||||| ||||     
T  44637298 gggtggttttgggtcaatt-ttgacataaaatcacctctcttcatcttttttatctttatttcaatctaaataagtgattttcacgtagatctaagtttc 44637396  T
Q  166 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcat 265  Q
    |||||||||||||| |||||||| ||||||| | |||||||||| |||||||||| ||||||||| ||| |||| || ||||||||||||| ||||||||    
T  44637397 ttctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcat 44637496  T
Q  266 attgaaagatcgattattcaatcaaagattt 296  Q
    ||||||||||| | ||||  |||||||||||    
T  44637497 attgaaagatcaaatattacatcaaagattt 44637527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 122 - 360
Target Start/End: Complemental strand, 39927705 - 39927466
Alignment:
Q  122 tctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    ||||||||||||||||||| | |||| || |||||||||| |||||| ||| |||||||| |||||  ||||||||||| |||||||||||||||||||     
T  39927705 tctatttcaatctaaataaataattttcagatagatctagatttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgt 39927606  T
Q  220 ggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgg 319  Q
    ||||||||||||||| |||| || || |||||||||| || ||||||||||||||||| |||| |||| ||| ||||    || |||||||||||||| |    
T  39927605 ggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatcggttatccaataaaaaatttggatgtcaacgttgcagatcc-g 39927507  T
Q  320 aagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||  ||||||  |||||||||||||||||||||||    
T  39927506 aagacatgagtattccaatcactttaattttatcatatatt 39927466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 360
Target Start/End: Complemental strand, 33817271 - 33817079
Alignment:
Q  180 atcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgat 279  Q
    ||||| ||||||||||||||| ||||| |||||||| ||| ||||||||||||||  ||| || || |||||||||| ||||||||||||||||||||||    
T  33817271 atcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgat 33817173  T
Q  280 tattcaat-------------caaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||             |||||||||     | ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  33817172 tattcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatt 33817079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 25728168 - 25728064
Alignment:
Q  64 tgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtga-tttcacatagatctaggt 162  Q
    ||||||||||||||||||||||||||||| |||||| ||    |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25728168 tgacgggtggttttgggtcaattcttgacctgaaatcactcctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatctaggt 25728069  T
Q  163 ttttt 167  Q
    |||||    
T  25728068 ttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 360
Target Start/End: Complemental strand, 33876740 - 33876549
Alignment:
Q  181 tcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgatt 280  Q
    |||| ||||||||||||||| ||||| |||||||| ||| ||||||||||||||  ||| || || |||||||||| |||||||||||||||||||||||    
T  33876740 tcatttaagtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgatt 33876642  T
Q  281 attcaat-------------caaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||             |||||||||     | ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  33876641 attcaatcaaattattcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatt 33876549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 30558820 - 30558736
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggttttttctttgtgatttcatcatctaagtg 191  Q
    |||||| | ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  30558820 cttcatatttttctttctatttcaatctaaaaaagtgatttcacacagatctaggttttttctttatgatttcatcatctgagtg 30558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 32677120 - 32677041
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||  |||| |||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||    
T  32677120 attcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattccagtcactttaattttatcatatatt 32677041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 19723404 - 19723483
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||  |||| ||||| ||||||||||| || ||||||||| |||| |||||||||||||||||||||    
T  19723404 attcaatcaaagatttgggcgtcaacgtagcagatccggaggcgatggatatttcggttactttaattttatcatatatt 19723483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 12635159 - 12635235
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||||||||||||||||||||||||||||||| ||| || |   ||||||||| || ||||||||||||||||    
T  12635159 tgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatc 12635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 309
Target Start/End: Original strand, 16801310 - 16801419
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    |||||||||||||||||||||||||| ||| |||||| ||||  ||  | ||||||| |  ||| ||||||||||||  |||||||||||| |||||||     
T  16801310 tgttgttcgtcgtcttgtgcggcgttatttaattttctgtatatttgagttgttcattttgttcgtattgaaagatcagttattcaatcaatgattttaa 16801409  T
Q  300 cgttaacgtt 309  Q
    ||| ||||||    
T  16801410 cgtcaacgtt 16801419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5983797 - 5983853
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||||||||    
T  5983797 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 5983853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 7836951 - 7836871
Alignment:
Q  145 tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||| ||| || |||||  |||||||||||||| |||||||| || | | ||||||||||||||||||||| ||||    
T  7836951 tttcacatatatcaagttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt 7836871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 47132892 - 47132968
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||| |||||||||||||||| ||||  ||| || || |||||||| | || ||||||||||||||||    
T  47132892 tgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatc 47132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 49626903 - 49626978
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||||||||||||||||||||||||||||||  | | || || |||||||| | || ||||||||||||||||    
T  49626903 tgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgt-tggttcatattgaaagatc 49626978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 16161823 - 16161857
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  16161823 tgttgttcgtcgtcttgtgcggcgttgtttgattt 16161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 34413197 - 34413163
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  34413197 tgttgttcgtcgtcttgtgcggcgttgtttgattt 34413163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 11462579 - 11462523
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| ||||||||||  ||   ||||||||||||||||||||||||||||    
T  11462579 tttgtgatttcgtcatctaagtccggcattttgttgttcgtcgtcttgtgcggcgtt 11462523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 19060861 - 19060933
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||| ||||||||||| || |||||||| |    | ||||||||||||||||||| |||||||||||||||    
T  19060861 ttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgattt 19060933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 360
Target Start/End: Complemental strand, 11709649 - 11709618
Alignment:
Q  329 atattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||    
T  11709649 atattccggtcactttaattttatcatatatt 11709618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 21686827 - 21686890
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||| ||||||||||| || |||||||  || | | ||||||||||||||||||||||||||    
T  21686827 ttttttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt 21686890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 32679235 - 32679164
Alignment:
Q  163 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||| || ||||||||||| ||| |||| || | | ||||||||||| ||||||||||||| |||||||||    
T  32679235 ttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgattt 32679164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 48750096 - 48750204
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||| ||| ||  ||||||||| ||||||||    ||| |||| |  | | ||||||||||||||||||||| ||    
T  48750096 tttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacg 48750193  T
Q  224 ttgtttgattt 234  Q
    |||||||||||    
T  48750194 ttgtttgattt 48750204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 7337794 - 7337744
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    |||||||||||||| |||||||| || | | ||||||||||||||||||||    
T  7337794 tttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 7337744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 31692568 - 31692495
Alignment:
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    |||||| |||||||||||||| ||||||||||||| | | || || |||||||| | || |||||||||||||||    
T  31692568 gttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttcgt-tggttcatattgaaagat 31692495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 31836678 - 31836724
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttctt 50  Q
    ||||||||||||||||||||  | |||||||||||||||||| ||||    
T  31836678 cctctccaacaagccggccctagttttctctctctaggttttctctt 31836724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 45415519 - 45415569
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||    
T  45415519 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgc 45415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 799889 - 799812
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcg 277  Q
    ||||||| ||| |||||||| | ||||||||| |||  || || || |||||||||| || |||||||||||||||||    
T  799889 tgttgtttgtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatcg 799812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 9341716 - 9341749
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    |||||||||||||||||||| |||||||||||||    
T  9341716 tgttgttcgtcgtcttgtgcagcgttgtttgatt 9341749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 41994377 - 41994450
Alignment:
Q  161 gttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||| |||||||||||| | ||| | || || | | |||||||| ||||||||||| ||||||||||||||    
T  41994377 gttttttttttgtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgattt 41994450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 51916836 - 51916739
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggc 222  Q
    |||||||||||||||||| ||| || ||| ||| || ||||   |||||||||||||| ||||| |  |||| | ||||||| |||||||||||||||    
T  51916836 tttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtgatttcatcgtctaattacggtgttatgttgttagtcgtcttgtgcggc 51916739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 1742242 - 1742298
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||||| ||||    
T  1742242 tttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt 1742298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 24582940 - 24583015
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    |||||||| ||| ||||||||||||||||||||||  | | || || |||||||| | || ||||||||||||||||    
T  24582940 tgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgt-tggttcatattgaaagatc 24583015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 27915047 - 27915015
Alignment:
Q  328 gatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||||||| ||||||||||    
T  27915047 gatattccggtcactttaatttcatcatatatt 27915015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 31317797 - 31317876
Alignment:
Q  258 tgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggt 338  Q
    |||||| |||||||||||| | | ||||||||| |||||  |||| |||||| |||| ||||||| |||||||||| ||||    
T  31317797 tgattcctattgaaagatcaacttttcaatcaatgatttgggcgtcaacgttacagacccggaag-catggatatttcggt 31317876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 44543262 - 44543337
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||| || ||||||||||||||||||  | | || || |||||||| | || ||||||||||||||||    
T  44543262 tgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgt-tggttcatattgaaagatc 44543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 11196707 - 11197056
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||| |||||  | ||||||||||||| |||| ||||| || ||||||||||| ||||||||||||||||||||||||| |||||| | |    
T  11196707 cctctccaacaagctggccctagttttctctctctagtttttctcttctagtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcatc 11196806  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11196807 catcttcatctttttctct--atttcaatctaaataagtgattttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgt 11196904  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||  ||||    
T  11196905 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattg-aagatcgattattcaatcaacgatttgggcgt 11197003  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||||||||||||||||     |||||||||||| ||||||||||||||| |||||||    
T  11197004 caacgttgcagatccgg-----atggatattccgatcactttaattttattatatatt 11197056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 360
Target Start/End: Complemental strand, 44100200 - 44099847
Alignment:
Q  5 ctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacca 104  Q
    |||||||||||||||||||  | |||||||||||||||||| |||| | | |||||| |||| ||||||||||||||| ||||||||| | |||| |||     
T  44100200 ctctccaacaagccggccctagttttctctctctaggttttctctttcggtttcttcattgaggggtggttttgggtcgattcttgacctaaaatcaccc 44100101  T
Q  105 aacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgtt 203  Q
      |||||||| ||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  44100100 ctcttcatctttttctctatatttcaatctaaataagttattttcacatagatctaagttttttctttgtgattt-atcatctaagtgtggtggtttgtt 44100002  T
Q  204 gttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgtt 303  Q
    ||||||||||||||||||||||||||||||| |||| || || |||||||||| ||||||||||||||||||| |||||||||||||||| ||  ||||     
T  44100001 gttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagagttgggcgtg 44099902  T
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||    
T  44099901 aacgttgcagatccggaggccatgaatattccg--cactttaattttatcatatatt 44099847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 11725507 - 11725853
Alignment:
Q  14 aagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatc 113  Q
    ||||||||||  | ||||||||||||| |||| |||| ||| |||||| |||| ||||||||||||||||||||||||| |||||| |||   |||| ||    
T  11725507 aagccggccctagttttctctctctagattttctctttcagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcgtc 11725606  T
Q  114 tctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 212  Q
    | ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  11725607 tttttctctttatttcaatctaaataagtgtttttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgt 11725706  T
Q  213 cttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgca 312  Q
    |||||||| | ||||||||||| || | ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||||    
T  11725707 cttgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattg-aagatcgattattcaattaaagatttgggcgtcaacgttgca 11725805  T
Q  313 gatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  11725806 gatccggaggccatggatactccggtcactttagttttatcatatatt 11725853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 32 - 360
Target Start/End: Original strand, 35580300 - 35580629
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgac-gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttca 130  Q
    ||||| ||||||||||||||||  |||||| ||||  ||||||||||||||||||| ||||| | |||| ||  | |||||||| |||||||||||||||    
T  35580300 tctctttaggttttttcttccaatttcttcattgagagggtggttttgggtcaatttttgacataaaatcactcatcttcatctttttctctctatttca 35580399  T
Q  131 atctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35580400 atttaaataagtgattttcacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgttt 35580499  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    |||||||||| ||||| |||||||| | |||||||||||||| ||||||||||||| ||||||||||  || | ||||||||||||||||| | ||||||    
T  35580500 gattttccgtcttcttgcggtgttcgtttgattcatattgaatgatcgattattcactcaaagatttaggcatgaacgttgcagatccggatg-catgga 35580598  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||| ||||||||||||||    
T  35580599 tattccggtcactttagttttatcatatatt 35580629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 42448273 - 42447938
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||| ||  || |||| |||||||||||||| |||||||||| |||||| |||   |||||||| ||||||||||||    
T  42448273 tttctctctctaggttttgtcttacagttttgtcattgaggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatt 42448174  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  42448173 tcaatctaaataagtgatttacatatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttcgtcgtcttgtgcggcat 42448074  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    ||||||||||| ||| ||| | |||||||||| ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||| | |||    
T  42448073 tgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaaggcc 42447974  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||| ||||||| | ||||||||||||||||||||||    
T  42447973 atgaatattccagacactttaattttatcatatatt 42447938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 360
Target Start/End: Complemental strand, 9619627 - 9619268
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    |||||||||||||||||| |  | ||||||||||||| |||| |||| ||  |||||| |||| ||||||||||||||||||||||||| |||||| |||    
T  9619627 cctctccaacaagccggctctagttttctctctctagattttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacc 9619528  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttct--ttgtgatttcatcatctaagtgtggtggttt 200  Q
       |||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||| |||||| |  |||| ||||||||||||| |||||||| |||    
T  9619527 cctcttcatctttttctctttatttcaatctaaataagtgattttcacatagatttagattttttttcattgtaatttcatcatctacgtgtggtgattt 9619428  T
Q  201 gttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagc 300  Q
    |||||||||||||||||||||||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||  ||    
T  9619427 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggc 9619328  T
Q  301 gttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||| ||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  9619327 gtcaactttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 9619268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 19876032 - 19876383
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||||||||||   | || |||||||||||||| ||||   |||| |   |||| ||||||||||||||||||||||||| |||||| ||     
T  19876032 cctctccaacaagccggccct--aattttctctctaggttttctctt---gattttctattgaggggtggttttgggtcaattcttgacctgaaattact 19876126  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
     | |||||||| ||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  19876127 catcttcatctttttctcaatatttcaatctaaataagtgattttcacatagatcaaggttttttctttgtgatttcatcatctaagtgtagtggtttgt 19876226  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||||||||||||||||  |||| |||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||  || |    
T  19876227 tgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcct 19876325  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  19876326 gaacgttgcagatccggagaccatggatattccggtcactttaatttgatcatatatt 19876383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 4808831 - 4809137
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| |||| ||||||||||||||||||||||||| |||||| |||   |||||||| ||| ||| ||||||||| |||||||||||||| |||||||    
T  4808831 ttcttcattgaggggtggttttgggtcaattcttgacctgaaattacccctcttcatctttttttctttatttcaatgtaaataagtgattttcacatag 4808930  T
Q  155 atctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgtt 253  Q
    |||||| |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  4808931 atctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgtt 4809030  T
Q  254 catctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatc 353  Q
    ||| ||||||||||||||||||||||| ||||||||| |||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  4809031 catttgattcatattgaaagatcgattgttcaatcaaggatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatc 4809130  T
Q  354 atatatt 360  Q
    |||||||    
T  4809131 atatatt 4809137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 37 - 360
Target Start/End: Original strand, 34611652 - 34611977
Alignment:
Q  37 ctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaa 136  Q
    |||| |||| |||| ||| |||||| | || ||||||||||||||||||||||||| |||||| ||  | |||||| | ||||| ||||||||| |||||    
T  34611652 ctagtttttctcttacagtttcttcatcgaggggtggttttgggtcaattcttgacctgaaatcactcatcttcatatttttctttctatttcagtctaa 34611751  T
Q  137 ataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34611752 ataagtgattttcacataaatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 34611851  T
Q  235 tccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattc 334  Q
    |||||  || | |||||||||| ||||||||||||||||||   | ||||||||||||||||  |||| |||||||||||| |||| || ||||||||||    
T  34611852 tccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttgcagattcggaggcgatggatattc 34611951  T
Q  335 cggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||    
T  34611952 cggtcactttaattttatcatatatt 34611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 28 - 353
Target Start/End: Original strand, 33895921 - 33896248
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||||  | |||||| |||  ||||||||||||||||||||||||  | || | |||   |||||||| ||||||||||||    
T  33895921 tttctctctctaggttttctcttcgcgtttcttcattgg-gggtggttttgggtcaattcttgatctaaagtcacccctcttcatctttttctctctatt 33896019  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    | ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33896020 taaatctaaataagtgactttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcttcttgtgcggcgt 33896119  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||| ||| |||| ||||| |||||||||| | ||||  |||||||||||||||||||||||||||||||   ||| ||||||||||||||||| |||    
T  33896120 tgtttgttttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccggaggcc 33896219  T
Q  325 atggatattccggtcactttaattttatc 353  Q
    |||||||||||||| ||||||||||||||    
T  33896220 atggatattccggtgactttaattttatc 33896248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 56 - 360
Target Start/End: Original strand, 2655736 - 2656043
Alignment:
Q  56 ttcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatag 154  Q
    |||||| ||||  |||||||||||||||||||||||| || ||| ||| | |||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  2655736 ttcttcattgagcggtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacatag 2655835  T
Q  155 atctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgt 252  Q
    |||||| ||||  |||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||| ||| | ||||||    
T  2655836 atctagattttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgt 2655935  T
Q  253 tcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttat 352  Q
    |||| ||||||||||||||||||||||| |||||||||||||||  | || ||||| ||||||||||| || ||||||||||||||||||||||||| ||    
T  2655936 tcatttgattcatattgaaagatcgattgttcaatcaaagatttgggtgtcaacgtcgcagatccggaggcaatggatattccggtcactttaatttcat 2656035  T
Q  353 catatatt 360  Q
    ||||||||    
T  2656036 catatatt 2656043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 43890370 - 43890035
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  |||||| |||| |||||||||||| ||| || ||||| |||||| |||   |||||||| ||||||| || |    
T  43890370 tttctctctctaggttttctcttacaatttcttcattgaggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctctttaat 43890271  T
Q  128 tcaatctaaataagtgatttc-acatagatctaggtttttt--ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    ||||||||||||||||||||  |||||||||||| ||||||  |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||    
T  43890270 tcaatctaaataagtgattttgacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcgtcttgtgcgacgt 43890171  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    | |||||||| |||| ||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||  |||| ||||||||||||||||| ||     
T  43890170 tatttgatttcccgtcttcgtacggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggca 43890071  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43890070 atggatattccggtcactttaatttcatcatatatt 43890035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 9072556 - 9072891
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    ||||||||||||| |||| || ||  | |||||| |||  ||||||||||||||||||| |||||||||||| |||   |||||||| ||||||||||||    
T  9072556 tttctctctctagattttctcatctcgtttcttcattggggggtggttttgggtcaatttttgacttgaaatcacccctcttcatctttttctctctatt 9072655  T
Q  128 tcaatctaaataagtga-tttcacatagatctaggtttt--ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    ||||| ||||||||||| ||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  9072656 tcaatttaaataagtgactttcacataaatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcttcatcttgtgcggcgt 9072755  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||| ||| || | ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||    || |||||||||||| |||| |||    
T  9072756 tgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagattcggaggcc 9072855  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||| | |||||||||||||||||||||    
T  9072856 atggatattccgatgactttaattttatcatatatt 9072891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 28 - 360
Target Start/End: Complemental strand, 14907169 - 14906834
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||||| |||| ||  |||||| |||| || || |||||| |||||||||||| |||||| ||| | |||||||| ||||||| ||||    
T  14907169 tttctctctctaggttttctcttacaatttcttcattgagggatgattttggatcaattcttgacctgaaatcacccatcttcatctttttctctttatt 14907070  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggtt--ttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 224  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  14907069 tcaatctaaataagtgattttcacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgttgtttgtcgtcttgtgcggcgt 14906970  T
Q  225 tgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcc 324  Q
    |||||||||| |||| ||| | || ||||||| |||||| |||| ||||||||||| ||||||||| |||||  |||| ||||||||||||  ||| ||     
T  14906969 tgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaagatcgattgttcaatcaatgatttgggcgtcaacgttgcagatttggaggca 14906870  T
Q  325 atggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  14906869 atggatattccggtcactttaattttatcatatatt 14906834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 3 - 360
Target Start/End: Complemental strand, 32724760 - 32724392
Alignment:
Q  3 acctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaa-ttcttgacttgaaata 100  Q
    |||||||||||||| || |||  | ||||||||||| |||||| |||| ||| |||| | |||| ||| |||||||||||||| || ||||| ||||||     
T  32724760 acctctccaacaagtcgaccctagttttctctctctgggttttctcttacagtttctccattgagggggtggttttgggtcaaattattgacctgaaatc 32724661  T
Q  101 accaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctag---------gttttttctttgtgatttcatcatctaagt 190  Q
    ||    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||         ||||||||||| |||||||||||||||| |    
T  32724660 acttctcttcatct-tttctctctatttcaatctaaataagtgattttcacatagatctagattttttttgttttttctttatgatttcatcatctaact 32724562  T
Q  191 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaa 290  Q
    |||||||||||||||||||||||||||||||||||||||||||| | || ||| | | |||||||| ||||||||||||||| |||||||||||||||||    
T  32724561 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaaatatcgattattcaatcaa 32724462  T
Q  291 agattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||  |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  32724461 agatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaatcttatcttatatt 32724392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 116 - 360
Target Start/End: Complemental strand, 43192502 - 43192258
Alignment:
Q  116 tttctctctatttcaatctaaataagtgatttc-acatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43192502 tttctctctatttcaatctaaataagtggtttttacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 43192403  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcaga 314  Q
    ||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||||||||||| |||||| ||||  | || |||||||||||    
T  43192402 tgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgattattcgatcaaatatttgggtgtcaacgttgcaga 43192303  T
Q  315 tccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| || |||| |||||||| |||||||||||||||||||||||    
T  43192302 tccgg-agacatgaatattccgatcactttaattttatcatatatt 43192258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 11 - 360
Target Start/End: Complemental strand, 9498863 - 9498510
Alignment:
Q  11 aacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttc 110  Q
    |||||| ||||||  | |||||||||||||||||| |||| ||  |||||| |||| |||||||||||||||||||||| || |||||| |||   ||||    
T  9498863 aacaagtcggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattctt-acctgaaatcacccctcttc 9498765  T
Q  111 atctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttttt----ctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||    |||||| |||||||||||||||||||||| ||||||||    
T  9498764 atctttttatctttatttcaatctaaataagtgattttcacatagatttaggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgt 9498665  T
Q  206 tcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaa 305  Q
    |||| |||||||||||| ||||||||||| |||| ||| | |||||||||| ||||||||||| ||||||||||| |||||||||||||||   ||  ||    
T  9498664 tcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttggacgacaa 9498565  T
Q  306 cgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| ||||||| | || ||||||||||| ||||||||||||| ||||||||||    
T  9498564 cgttgtagatccgaaggcaatggatattcctgtcactttaatttcatcatatatt 9498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 29777044 - 29777392
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||||||| ||||||    |||||||||||||||||| || ||| | |||||| |||  | ||||||||||||||||| ||||| |||||| ||     
T  29777044 cctctccaacaagtcggccctaattttctctctctaggttttctcatcctgtttcttcattggtgagtggttttgggtcaattattgacatgaaatcact 29777143  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgatttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgt 202  Q
       |||||||| |||||||||||||||||||||||||| ||         |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29777144 cctcttcatctttttctctctatttcaatctaaataagcga---------gatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgt 29777234  T
Q  203 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgt 302  Q
    |||||||||||||||||| | ||||||| ||| |||| ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||   |||    
T  29777235 tgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgt 29777334  T
Q  303 taacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
     ||| |||||||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  29777335 caacattgcagatccggagaccatggatattccggtgactttaatattatcatatatt 29777392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 68 - 360
Target Start/End: Original strand, 11464051 - 11464344
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggtttt- 165  Q
    |||||||||| |||||||||||||| |||||| |||   |||||| |||| |||| ||||||||| | |||||||||||| ||||||||||||| ||||     
T  11464051 gggtggttttaggtcaattcttgacctgaaatcacccctcttcat-tctt-ctctttatttcaatttgaataagtgattttcacatagatctagattttt 11464148  T
Q  166 -ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattca 264  Q
     |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   || ||  | |||||||||| |||||||    
T  11464149 tttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattca 11464248  T
Q  265 tattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||| |||||||||||||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  11464249 tattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatt 11464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 27 - 360
Target Start/End: Original strand, 28239670 - 28240014
Alignment:
Q  27 atttctctctctaggttttttcttccagattcttcgttgacggg-tggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctcta 125  Q
    |||| |||||||||||||| |||||||  |||||| |||| ||| || ||||||||||||| ||||| |||||| |||   |||||||| ||||||||||    
T  28239670 atttttctctctaggttttctcttccattttcttcattgagggggtgattttgggtcaatttttgacctgaaatcacctctcttcatctttttctctcta 28239769  T
Q  126 tttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||| |||  |||||||||||||||||| |||  | |||||| |||| | ||||||| ||||||||||||||||||||||||||||    
T  28239770 tttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcg 28239869  T
Q  224 ttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc------ 317  Q
    ||||||||||   |||||| || |||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||          
T  28239870 ttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccggaggc 28239969  T
Q  318 --ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
      ||||| ||||| |||||||||||||||||||||||||| ||||    
T  28239970 atggaagacatgggtattccggtcactttaattttatcatttatt 28240014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 32 - 360
Target Start/End: Original strand, 44577879 - 44578203
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||| | | |||||| |||| ||||||||||||||||||| ||||| | |||| ||    |||||||| ||||||||||||||||    
T  44577879 tctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctctctatttcaa 44577978  T
Q  132 tctaaataagtgattt-cacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44577979 tctaactaagtgatttacacatagatctaggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 44578078  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
     || | || | ||| | |||| || || ||||| ||||||||||||||||||||        |||||  |||| ||||||||||||||| | | ||||||    
T  44578079 catctcccatcttcatgcggtatttatttgatttatattgaaagatcgattatt------ttgatttgggcgtcaacgttgcagatccgaatgacatgga 44578172  T
Q  330 tattccggtcactttaattttatcatatatt 360  Q
    |||||||||||||||||||||||||||||||    
T  44578173 tattccggtcactttaattttatcatatatt 44578203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 17949086 - 17949408
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatt 127  Q
    |||||||||||||||| | |||| ||| |||||| |||| ||||| ||||||||||||| ||||| |||||| |||   ||||| || ||||||||||||    
T  17949086 tttctctctctaggttgtctcttacagtttcttcattgatgggtgattttgggtcaattattgacctgaaatcacccctcttcacctttttctctctatt 17949185  T
Q  128 tcaatctaaataagtgattt-cacatagatctaggttttttc-tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||| ||||| ||||||||||| | ||||||  ||||||||||||||||||||||||| |||||||||||            ||||||||    
T  17949186 tcaatctaaataagcgattttcacatagatcttgatttttttatttgtgatttcatcatctaagtgtgatggtttgttgt------------gcggcgtt 17949273  T
Q  226 gtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagcca 325  Q
    ||||||||| |||| ||| |  ||||||||| | |||||||||||||||||||||||||||||| ||||||  |||| |||||| |||||||||| ||||    
T  17949274 gtttgatttgccgtcttcgtgtggtgttcattttattcatattgaaagatcgattattcaatcagagatttgggcgtcaacgttccagatccggaggcca 17949373  T
Q  326 tggatattccggtcactttaattttatcatatatt 360  Q
    |||||||| ||||||||||||||||||||||||||    
T  17949374 tggatattacggtcactttaattttatcatatatt 17949408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 32 - 359
Target Start/End: Original strand, 33342280 - 33342606
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||||| || || |||||| |||   |||||||  ||| |||||| |||||    
T  33342280 tctctctaggttttttcttcgagtttcttcattgaggggtggttttgggtcaatttttaacctgaaatcacccctcttcatccttttttctctaattcaa 33342379  T
Q  132 tctaaataagtgattt--cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||| ||| | |||||||||||| |||||||| ||||||| ||||||||| |||    
T  33342380 tctaaataagtgatttttcacatagatctaggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgtttttt 33342479  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    ||||| ||||||| || ||||||| || |||||||||||| |||||| |||||||||||||||| ||   || | |||||||||||| || || ||||      
T  33342480 gatttcccgtattgttgcggtgtttatttgattcatattg-aagatcaattattcaatcaaagaattggacg-tcacgttgcagatctgg-aggcatgag 33342576  T
Q  330 tattccggtcactttaattttatcatatat 359  Q
    ||||| ||||||||||||||||||||||||    
T  33342577 tattcaggtcactttaattttatcatatat 33342606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 120 - 360
Target Start/End: Complemental strand, 37566032 - 37565790
Alignment:
Q  120 tctctatttcaatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgt 217  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  37566032 tctctatttcaatctaaataattgattttcacatagatttaggtttttttctttgagatttcatcatctaagtgtggtggtttgttattcgtcgtcttgt 37565933  T
Q  218 gcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatcc 317  Q
    ||||| |||||||||||||| |  || | ||| |||||| ||||||||||||||||||   | ||||||| ||||||||  |||||||||||||||||||    
T  37565932 gcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaaagataagtaattcaattaaagatttgggcgttaacgttgcagatcc 37565833  T
Q  318 ggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    | | || |||||||||||||||||||| |||||||||||||||    
T  37565832 gaatgcgatggatattccggtcactttgattttatcatatatt 37565790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 32 - 360
Target Start/End: Complemental strand, 27747353 - 27747026
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||||||||||| |||||||  |||||| || | |||| |||||||||||||| |||||||||||| ||||  |||||||| ||| |||| |||||||    
T  27747353 tctctctaggttttctcttccaacttcttcattaaggggtagttttgggtcaatttttgacttgaaatcaccattcttcatctttttatctccatttcaa 27747254  T
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttg 230  Q
    | ||||||||| |||| |||||| || || |||||||||| ||||||||| |||||  |||||||||| ||||||||||| ||||||||| |  ||||||    
T  27747253 tttaaataagtaattttcacataaatataagttttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgtttg 27747154  T
Q  231 attttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggat 330  Q
    |||| | || || || |||||||||| ||||||||||||||||||| |||||||||||||||||||  || | ||||||| ||||||||| | ||||| |    
T  27747153 atttcctgttttgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcatcaacgttgtagatccggatg-catgggt 27747055  T
Q  331 attccggtcactttaattttatcatatatt 360  Q
    |||||||||||||| | |||||||||||||    
T  27747054 attccggtcactttta-tttatcatatatt 27747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 81 - 360
Target Start/End: Original strand, 16794185 - 16794464
Alignment:
Q  81 tcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt--cacatagatctaggttttttctttgtgattt 178  Q
    |||||| |||||||||||| ||| | |||||||| |||||||||| |||||||||||||||||||||  |||||| |||||||||||| ||| |||||||    
T  16794185 tcaatttttgacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctaggttttt-cttcgtgattt 16794283  T
Q  179 catcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcga 278  Q
    |||||||  || |||||| | ||||||||||||||||||||  ||| ||||||||| ||||||| ||||||||||||| ||||||||||||||||||| |    
T  16794284 catcatccgagagtggtgttatgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatcaa 16794383  T
Q  279 ttattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||||| || | | | |||||||||||  | |||| ||||| ||||| ||||  | |||||||||||||||||    
T  16794384 ttattcaatcaaagaattgaacatcaacgttgcagaatc-gaaggcatgggtattctggtctatataattttatcatatatt 16794464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 32 - 358
Target Start/End: Complemental strand, 15597408 - 15597081
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctc-tctatttca 130  Q
    ||||| |||||||| ||||||||  | ||  |||| ||||||||||  ||||||| ||||| |||||| |||   |||||||| |||||  || ||||||    
T  15597408 tctctataggttttctcttccagtatttttattgaggggtggttttcagtcaatttttgacctgaaatcacccctcttcatctttttctagtccatttca 15597309  T
Q  131 atctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttt 229  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||| |||||  ||||| ||||| ||||||| ||||||||||| ||| ||| ||    
T  15597308 atctaaataagtgattttcacatagatctaggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggccttggtt 15597209  T
Q  230 gattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatgga 329  Q
    |||||||||| || ||||||||||||| ||||||||||| || ||||| |||||||||| ||||||| ||||| ||||||| ||||||   || ||| ||    
T  15597208 gattttccgttttgttacggtgttcatttgattcatattaaacgatcggttattcaatcgaagatttgagcgtcaacgttgtagatcc-atagtcataga 15597110  T
Q  330 tattccggtcactttaattttatcatata 358  Q
    |||| |||||||||||||||| |||||||    
T  15597109 tatttcggtcactttaattttctcatata 15597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 120 - 360
Target Start/End: Original strand, 33298787 - 33299027
Alignment:
Q  120 tctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||| |||| | ||||| |||||||| ||||||||||    
T  33298787 tctctaattcaatctaaataagtgattttcacatagatctaggttttacctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtg 33298886  T
Q  219 cggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccg 318  Q
     || ||||||||||||  ||| ||  | |||||||||| |||||||||| ||||||  ||||||||||| ||||||||   ||| |||||||||||| ||    
T  33298887 tggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgcagatacg 33298986  T
Q  319 gaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || | ||||  |||||  ||||||||||||||||||||||||    
T  33298987 gatg-catgagtattctagtcactttaattttatcatatatt 33299027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 360
Target Start/End: Complemental strand, 39153293 - 39153054
Alignment:
Q  125 atttcaatctaaataagtgattt-cacatagatctaggt----tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgc 219  Q
    |||||||| |||||||||||||| ||||||||| |||||    |||||||| |||||||| |||||  ||||||||||| |||||||||||||||||||     
T  39153293 atttcaatttaaataagtgattttcacatagatttaggtattttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgt 39153194  T
Q  220 ggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccgg 319  Q
     |||||||| |||||  ||| || ||||| | ||||| ||||||| |||||||||| ||||||||||| ||| ||||  | || | ||||||||||||||    
T  39153193 cgcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaaagattgattattcaattaaaaatttgggtgtcagcgttgcagatccgg 39153094  T
Q  320 aagccatggatattccggtcactttaattttatcatatatt 360  Q
     || ||||| ||||||| |||||||||||||||||||||||    
T  39153093 -aggcatgggtattccgatcactttaattttatcatatatt 39153054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 208 - 360
Target Start/End: Complemental strand, 23851557 - 23851405
Alignment:
Q  208 gtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacg 307  Q
    ||||||||||||| ||||||||||||| |||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||   ||| ||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacg 23851458  T
Q  308 ttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||||||||||| || ||||||||| |||| |||||||||| ||||||||||    
T  23851457 ttgcagatccggaggcaatggatatttcggtaactttaatttcatcatatatt 23851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 32 - 360
Target Start/End: Original strand, 15046735 - 15047065
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttggg-tcaattcttgacttgaaataaccaaacttcatctctttctc-tctatttc 129  Q
    ||||| ||| |||| ||||| || |||||| |||| ||||| ||||||| |||||| ||||  |||||| |||   |||||||| |||||  || |||||    
T  15046735 tctctttagattttctcttcaagtttcttcattgaggggtgattttggggtcaatttttgatatgaaatcacctctcttcatctttttctagtccatttc 15046834  T
Q  130 aatctaaataagtgattt-cacatagatctaggtttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgt 227  Q
    |||  || |||||||||| |||||||||||||||||||| ||| |||||||| |||||  ||||||||||| |||||||||||||||||||||| | |||    
T  15046835 aattcaagtaagtgattttcacatagatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgt 15046934  T
Q  228 ttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatg 327  Q
    ||||||| | || ||  | || |||| || ||||| ||||||||| ||||||| | |||| |||| |||   ||| |||||||||||||| | || ||||    
T  15046935 ttgatttcctgtcttggtgcgatgtttatttgattgatattgaaaaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccag-aggcatg 15047032  T
Q  328 gatattccggtcactttaattttatcatatatt 360  Q
      ||||||| | |||||||||||||||||||||    
T  15047033 tgtattccgattactttaattttatcatatatt 15047065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 43135600 - 43135490
Alignment:
Q  249 gtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaatt 348  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||  |||| |||||| ||||||||||||||||| |||||| |||||||||||||    
T  43135600 gtgttcatctgattcatagtgaa-gatcgattattcaatcaaagatttgggcgtcaacgtttcagatccggaagccatgtatattctggtcactttaatt 43135502  T
Q  349 ttatcatatatt 360  Q
    ||||||||||||    
T  43135501 ttatcatatatt 43135490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 36532829 - 36532944
Alignment:
Q  120 tctctatttcaatctaaataagt-gatttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtg 218  Q
    ||||||||||||| ||||||||  | ||||||||| || ||||||||||||| | | ||| ||| |||| |||||||| | |||||||||||||||||||    
T  36532829 tctctatttcaatttaaataaggagttttcacatatatttaggttttttcttcgaggttttatcgtctaggtgtggtgttgtgttgttcgtcgtcttgtg 36532928  T
Q  219 cggcgttgtttgattt 234  Q
    ||| ||||||||||||    
T  36532929 cggtgttgtttgattt 36532944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 5333391 - 5333493
Alignment:
Q  174 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaag 273  Q
    |||||| |||||| |||| |||| | |||||||||||||||||||||| ||||||||||||| ||| || || |||||||| | || ||| |||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaag 5333490  T
Q  274 atc 276  Q
    |||    
T  5333491 atc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 8443650 - 8443579
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatt 233  Q
    |||||| ||| ||||||| || |||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  8443650 ttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatt 8443579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 15889574 - 15889644
Alignment:
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagat 275  Q
    ||||||||||||||||||||||||||||||||| | |  || || ||||||| ||||||||||||||||||    
T  15889574 ttcgtcgtcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaaagat 15889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 18733939 - 18734061
Alignment:
Q  107 cttcatctctttctctctatttcaatctaaataagtgatttcacatagatctag-gttttttctttgtgatttcatcatctaagtgtggtggtttgttgt 205  Q
    |||||||| ||||||||||||||||| ||||||| |||||| | |||||||| |  ||||||||| ||||| ||||| ||| | ||||  | | ||||||    
T  18733939 cttcatctttttctctctatttcaatttaaataattgattttaaatagatctggttttttttcttcgtgatatcatcgtctcaatgtgacgatgtgttgt 18734038  T
Q  206 tcgtcgtcttgtgcggcgttgtt 228  Q
    ||| |||||||||||||| ||||    
T  18734039 tcgccgtcttgtgcggcgatgtt 18734061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 276
Target Start/End: Complemental strand, 17427382 - 17427211
Alignment:
Q  109 tcatctctttctctctatttcaatctaaataagtg-atttcacatagatctaggtttt---ttctttgtgatttcatcatctaagtgtggtggtttgttg 204  Q
    |||||| ||||||||||||||| | ||||||||||  ||||| |||||||||||||||   ||||| || ||||| |||| | ||||||    | ||||     
T  17427382 tcatctttttctctctatttcagtgtaaataagtgcttttcaaatagatctaggttttttcttcttcgttatttcgtcatatgagtgtgacattgtgtta 17427283  T
Q  205 ttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||| |||||||||||| |||||||| |||||  || ||  |||| ||||||| || ||| ||||||||||||    
T  17427282 ttcttcgtcttgtgcgccgttgtttaattttttgtcttgctacgatgttcatttgcttcttattgaaagatc 17427211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7883370 - 7883314
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| ||||||||||| || | | ||||||||||||||||||||||||||    
T  7883370 tttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt 7883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 23230603 - 23230659
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||||||||    
T  23230603 tttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtt 23230659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 357
Target Start/End: Original strand, 35812688 - 35812830
Alignment:
Q  213 cttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgca 312  Q
    ||||||||| ||||||||||| |  || || ||||| |||| || |||||||||||||||||||| ||||||||| || |||||   ||||||||||| |    
T  35812688 cttgtgcggtgttgtttgattgtttgtcttgttacg-tgtttatttgattcatattgaaagatcggttattcaattaatgatttggacgttaacgttgaa 35812786  T
Q  313 gatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||| |  ||| ||||  |||| | || ||||||||||||||||||    
T  35812787 gatac-aaagacatgagtatttcagtgactttaattttatcatat 35812830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 37971243 - 37971299
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||||||||    
T  37971243 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 37971299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20553377 - 20553314
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||| ||||||||||| || |||||||| || | |||||||||||||||||| |||||||||    
T  20553377 ttttttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtt 20553314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 1236835 - 1236722
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    |||||| ||||||||||| || |||||||| |    | |||||||||| ||||||||||||||||||||||||  | | || || |||||||| | || |    
T  1236835 ttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgt-tggt 1236737  T
Q  262 tcatattgaaagatc 276  Q
    |||||||||||||||    
T  1236736 tcatattgaaagatc 1236722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 1239535 - 1239422
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    |||||| ||||||||||| || |||||||| |    | |||||||| ||||||||||||||||||||||||||  | | || || |||||||| | || |    
T  1239535 ttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgt-tggt 1239437  T
Q  262 tcatattgaaagatc 276  Q
    |||||||||||||||    
T  1239436 tcatattgaaagatc 1239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 17431032 - 17430970
Alignment:
Q  109 tcatctctttctctctatttcaatctaaataagtg-atttcacatagatctaggttttttctt 170  Q
    |||||| | ||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||    
T  17431032 tcatctttctctctctatgtcaatctaaataagtgcttttcagatagatctaggttttttctt 17430970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 274
Target Start/End: Complemental strand, 29617375 - 29617301
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaaga 274  Q
    |||||||||||||||||||||||| ||||||||||  ||| || || |||||||| | || ||| ||||||||||    
T  29617375 tgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaaga 29617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 12173381 - 12173495
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgatt-tcacatagatctaggttttt 166  Q
    ||||||||||||||||| | ||||| |||||| ||| | ||| |||| ||| |||||||||||||| ||||||||| || | |||| | |||| ||||||    
T  12173381 gggtggttttgggtcaacttttgacctgaaatcacccatctttatct-tttttctctatttcaatcaaaataagtgtttcttacatggttcta-gttttt 12173478  T
Q  167 tctttgtgatttcatca 183  Q
    ||||  |||||||||||    
T  12173479 tcttcatgatttcatca 12173495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 12417809 - 12417923
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgatt-tcacatagatctaggttttt 166  Q
    ||||||||||||||||| | ||||| |||||| ||| | ||| |||| ||| |||||||||||||| ||||||||| || | |||| | |||| ||||||    
T  12417809 gggtggttttgggtcaacttttgacctgaaatcacccatctttatct-tttttctctatttcaatcaaaataagtgtttcttacatggttcta-gttttt 12417906  T
Q  167 tctttgtgatttcatca 183  Q
    ||||  |||||||||||    
T  12417907 tcttcatgatttcatca 12417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 15344297 - 15344372
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||||||||| |||||||||  | | || || |||||||| | || ||||||||||||||||    
T  15344297 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgt-tggttcatattgaaagatc 15344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 15433362 - 15433437
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||||||||| |||||||||  | | || || |||||||| | || ||||||||||||||||    
T  15433362 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgt-tggttcatattgaaagatc 15433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 15524666 - 15524741
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatc 276  Q
    ||||||||||||||||||||||||| |||||||||  | | || || |||||||| | || ||||||||||||||||    
T  15524666 tgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgt-tggttcatattgaaagatc 15524741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 39657440 - 39657472
Alignment:
Q  202 ttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    |||||||||||||||||||||||||||||||||    
T  39657440 ttgttcgtcgtcttgtgcggcgttgtttgattt 39657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 18890804 - 18890770
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||||||||||||||| |||||||||||||    
T  18890804 tgttgttcgtcgtcttgtgcgacgttgtttgattt 18890770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 41896501 - 41896535
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||| |||||||||||||||||||||||||||    
T  41896501 tgttgttggtcgtcttgtgcggcgttgtttgattt 41896535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 12184210 - 12184263
Alignment:
Q  114 tctttctctctatttcaatctaaataagtg-atttcacatagatctaggttttt 166  Q
    ||||| ||||||||||||||||||||||||  |||||||||| ||||| |||||    
T  12184210 tctttttctctatttcaatctaaataagtgtttttcacatagctctagtttttt 12184263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 12428638 - 12428691
Alignment:
Q  114 tctttctctctatttcaatctaaataagtg-atttcacatagatctaggttttt 166  Q
    ||||| ||||||||||||||||||||||||  |||||||||| ||||| |||||    
T  12428638 tctttttctctatttcaatctaaataagtgtttttcacatagctctagtttttt 12428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 25241767 - 25241706
Alignment:
Q  108 ttcatctctttctctctatttcaatctaaataagtgatt-tcacatagatctaggttttttc 168  Q
    ||||||| ||||| ||||||||||||| ||||||||||| ||||||| || ||| |||||||    
T  25241767 ttcatctttttctttctatttcaatctcaataagtgattgtcacataaatttagattttttc 25241706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3673401 - 3673453
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgg 221  Q
    ||||||||||| || |||||||| |||| | |||||||||||||||| |||||    
T  3673401 tttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg 3673453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 14585690 - 14585718
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtt 228  Q
    |||||||||||||||||||||||||||||    
T  14585690 tgttgttcgtcgtcttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 20227419 - 20227347
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattt 234  Q
    ||||||||| ||||||||||| ||| |||| |  | | | |||||||||||||| |||| |||||||||||||    
T  20227419 ttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 20227347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 24099356 - 24099284
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||||||| ||| | ||||||||||||||  | | || || |||||||||| || ||||||||||||    
T  24099356 tgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaa 24099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 5237 - 5564
Alignment:
Q  34 tctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatc 133  Q
    |||||||||||| |||||| | |||||| |||  ||||||||||||||||||||||||| |||||| |||   |||||||| | |||||||| |||||||    
T  5237 tctctaggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatc 5335  T
Q  134 taaataagtga-tttcacatagatctaggtttt-ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttga 231  Q
    ||||||||||| ||| ||||| ||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||     
T  5336 taaataagtgacttttacatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgc 5435  T
Q  232 ttttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggata 331  Q
    ||| |||| |||||  ||||||||| | |||  ||||||||||| ||||||||||||||||||||   ||| ||||||||||||||||| ||||||||||    
T  5436 tttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccggaggccatggata 5535  T
Q  332 ttccggtcactttaattttatcatatatt 360  Q
    ||||||| |||||||||||||||||||||    
T  5536 ttccggtgactttaattttatcatatatt 5564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 110 - 360
Target Start/End: Complemental strand, 201534 - 201284
Alignment:
Q  110 catctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 208  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgattttcacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttcg 201435  T
Q  209 tcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgt 308  Q
    | ||||||||||||| ||||||||||  ||| |||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||| |||||    
T  201434 tagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgt 201336  T
Q  309 tgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  201335 tgtagatccgtaggccatggatattccggtcactttaattttatcatatatt 201284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 68 - 360
Target Start/End: Complemental strand, 16527 - 16231
Alignment:
Q  68 gggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataagtgattt-cacatagatctaggttttt 166  Q
    |||||||| | |||||||||||||| | |||| |   | |||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  16527 gggtggttctaggtcaattcttgacctaaaatcattcatcttcatctgtttctctctatttcaatctaaataagtgattttcacatagatttaggttttt 16428  T
Q  167 t---ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattc 263  Q
    |   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |   || |||   ||||||| || ||||||    
T  16427 ttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattc 16328  T
Q  264 atattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    ||||| ||| |||||||||||||||||||||||  |||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  16327 atattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggctatggatattccggtcactttaattttattatatatt 16231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 360
Target Start/End: Complemental strand, 362057 - 361710
Alignment:
Q  10 caacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaactt 109  Q
    |||||||||||||   | ||||||||| |||||||| |||| ||| |||||| |||| ||||||||||| ||||||||||||| |||||| |||   ||     
T  362057 caacaagccggccttagttttctctctttaggttttctcttacagtttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctctc 361958  T
Q  110 catctctttctctctatttcaatctaaataagtga-tttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 208  Q
    ||  ||||| ||||||||||||||||||||||| | |||||||||||  |||||||||  |||||||||||||||| ||||| |||||||||||||||||    
T  361957 ca--tctttttctctatttcaatctaaataagtaattttcacatagagttaggttttt--tttgtgatttcatcatttaagtatggtggtttgttgttcg 361862  T
Q  209 tcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgt 308  Q
    |||||||||||||||||||||||||| | || ||  | | |||||||| |||||| ||  |||||||  |||||||||||||||||||   ||| |||||    
T  361861 tcgtcttgtgcggcgttgtttgatttcctgtcttggtgcagtgttcatttgattcttacagaaagattaattattcaatcaaagatttggacgtcaacgt 361762  T
Q  309 tgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    || ||||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  361761 tgtagatccggaggccatggatactccagtcactttaattttctcatatatt 361710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 206
Target Start/End: Original strand, 8556 - 8731
Alignment:
Q  32 tctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaa 131  Q
    |||||| ||||||| |||||||| |||||| |||| |||||||||||||| ||||||| ||||||||| |||    ||||||| ||| ||||||||||||    
T  8556 tctctccaggttttctcttccagtttcttcattgaggggtggttttgggttaattcttaacttgaaatcaccccttttcatctttttatctctatttcaa 8655  T
Q  132 tctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 206  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656 tctaaataagtgattttcacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 8745 - 8857
Alignment:
Q  248 ggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaat 347  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||  |||||||||||| ||||||||||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaat 8844  T
Q  348 tttatcatatatt 360  Q
    |||||||||||||    
T  8845 tttatcatatatt 8857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 360
Target Start/End: Original strand, 6293 - 6471
Alignment:
Q  182 catctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgatta 281  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||    
T  6293 catcttagtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgatta 6392  T
Q  282 ttcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatt 360  Q
    |||||||||| ||||  || | ||||||||||||||  | |||||| ||| ||||||||||||| ||||||||||||||    
T  6393 ttcaatcaaatatttgggcatcaacgttgcagatccaaaggccatgaataatccggtcactttagttttatcatatatt 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 6147 - 6289
Alignment:
Q  4 cctctccaacaagccggcccacgatttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataacc 103  Q
    ||||||||| ||||||||||    ||||||||| |||||||| |||||||| |||||| |||| |||||||||  |||||||||||||| | |||| |||    
T  6147 cctctccaataagccggccctaattttctctctttaggttttctcttccagtttcttcattga-gggtggtttcaggtcaattcttgacctaaaatcacc 6245  T
Q  104 aaacttcatctctttctctctatttcaatctaaataagtgattt 147  Q
       |||||||| ||| |||||||| |||||||||||||||||||    
T  6246 cctcttcatctttttttctctattccaatctaaataagtgattt 6289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 162 - 356
Target Start/End: Complemental strand, 83544 - 83353
Alignment:
Q  162 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgat 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||  ||| ||| | |||| ||||| ||||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc---ttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgat 83448  T
Q  262 tcatattgaaagatcgattattcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcata 356  Q
    ||||||||||||||||||||||||||| |||||||   ||| |||||||||||| | || | ||||||| |||||||||||||||||||| ||||    
T  83447 tcatattgaaagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaattttaccata 83353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 265
Target Start/End: Complemental strand, 20624 - 20402
Alignment:
Q  41 gttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaataaccaaacttcatctctttctctctatttcaatctaaataa 140  Q
    ||||| ||||| || |||||| | || |||||||||||| |||||| ||||| |||||| ||| |   |||||| |||| |||||||  |||||||||||    
T  20624 gttttctcttcaagtttcttcatcgaggggtggttttgg-tcaatttttgacctgaaatcacccattgtcatctttttcactctatta-aatctaaataa 20527  T
Q  141 gtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgt 239  Q
    ||||||| || |||||| | | |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20526 gtgattttcatatagatttggctttttttttta-gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgt 20428  T
Q  240 attcttacggtgttcatctgattcat 265  Q
     ||||| |||||||||| ||||||||    
T  20427 tttcttgcggtgttcatttgattcat 20402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 453853 - 454030
Alignment:
Q  116 tttctctctatttcaatctaaataagtgattt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtct 214  Q
    ||||||| ||||| ||| |||||||||||||| |||||| || || |||||||||| |||||||| | || | | |||| |||| |||||||||||||||    
T  453853 tttctctttattttaatttaaataagtgattttcacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgtct 453952  T
Q  215 tgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaag 292  Q
    || ||||||||||||||||||| || || || |||||||||| ||| |||||||||||||||||||||||||||||||    
T  453953 tgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattcaatcaaag 454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 6016 - 6088
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaa 272  Q
    |||||||||||||||||||||||||||||||||||  |||||| || |||||||||| || ||||||||||||    
T  6016 tgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 357
Target Start/End: Complemental strand, 34843 - 34695
Alignment:
Q  208 gtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttagcgttaacg 307  Q
    |||||||| |||| | |||||||||||  ||| || || | | |||||| ||||||||||||||||||| | ||| ||||||| |||||  |||| ||||    
T  34843 gtcgtcttctgcgacattgtttgatttctcgttttgttgcagggttcatttgattcatattgaaagatctactatgcaatcaatgatttatgcgtcaacg 34744  T
Q  308 ttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||| |||||| || ||||  | |||| |||||||||||||||||||||    
T  34743 ttgcaaatccgg-agacatgagttttccagtcactttaattttatcatat 34695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 15449 - 15505
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| ||||||||||| |||| | ||||||||||||||||||||||||||    
T  15449 tttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 1859 - 1751
Alignment:
Q  126 tttcaatctaaataagtgattt-cacatagatctaggttttttcttt-gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 223  Q
    |||||||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || ||| |||| |  | | |||||||||||||||||| |||||    
T  1859 tttcaatctaaataagtgattttcacatacatcaag--tttttctttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcg 1762  T
Q  224 ttgtttgattt 234  Q
    |||||||||||    
T  1761 ttgtttgattt 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 32878 - 32822
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | ||||||||||||||||||||||||||||    
T  32878 tttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 74 - 145
Alignment:
Q  28 tttctctctctaggttttttcttccagattcttcgttgacgggtggttttgggtcaattcttgacttgaaat 99  Q
    ||||||||||||| |||| |||| ||| |||| | |||| |||||||||||||||||||||| || ||||||    
T  74 tttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaat 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 36758 - 36639
Alignment:
Q  200 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttacggtgttcatctgattcatattgaaagatcgattattcaatcaaagattttag 299  Q
    |||||||||||||||||||||| ||||||||||||    | || ||  |||| | || || ||||||||||||||| ||  ||||||||||  |||| ||    
T  36758 tgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagattgacaattcaatcaataatttgag 36659  T
Q  300 cgttaacgttgcagatccgg 319  Q
    ||| ||| ||||||||||||    
T  36658 cgtcaacattgcagatccgg 36639  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 50880 - 50932
Alignment:
Q  304 aacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    ||||||||||||||||||| |||||||||| |||| |||| | |||||||||||    
T  50880 aacgttgcagatccggaag-catggatatttcggtgacttaagttttatcatat 50932  T

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Target: scaffold0884 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 2104 - 2048
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    |||||||||||||| |||||||| ||   |||||||||||||||||| || ||||||    
T  2104 tttgtgatttcatcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtt 2048  T

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Target: scaffold0445 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 1302 - 1358
Alignment:
Q  169 tttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgtt 225  Q
    ||||||||||| || |||||||| || | | ||||||||||||||||||| ||||||    
T  1302 tttgtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt 1358  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 31282 - 31207
Alignment:
Q  281 attcaatcaaagattttagcgttaacgttgcagatccggaagccatggatattccggtcactttaattttatcatat 357  Q
    |||||||||| ||||| ||| | || |||||||||||||||| ||||| |||| |||| ||||  ||||||||||||    
T  31282 attcaatcaacgatttgagcatcaatgttgcagatccggaag-catgggtatttcggtgacttagattttatcatat 31207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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