View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_high_17 (Length: 419)
Name: NF5265_high_17
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 30 - 402
Target Start/End: Complemental strand, 45177541 - 45177169
Alignment:
| Q |
30 |
aacaaaataatccaccgaatgtaactaaacatgtatttgaattgcgttaatcatccaaattatattgttattttgacagctcattcagaaatgtaaatat |
129 |
Q |
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| T |
45177541 |
aacaaaataatccaccgaatgtaactaaacatgtatttgaattgcgttaatcatccaaattatattgttattttgacagctcattcagaaatgtaaatat |
45177442 |
T |
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| Q |
130 |
gagtgaatattattattcaccttgaggaagcaaacatccaaaacccaatgaccaaacttgggcaacaaatggatcaatgttaactgtggactctcaaaat |
229 |
Q |
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| T |
45177441 |
gagtgaatattattattcaccttgaggaagcaaacatccaaaacccaatgaccaaacttgggcaacaaatggatcaatgttaactgtggactcccaaaat |
45177342 |
T |
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| Q |
230 |
cgtcatttttgaaagaaaaccgaaacattttcactcttttctctccaaacactacaatcacaaattcagaactagaagcaatcccgtgcacacgaattcc |
329 |
Q |
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| T |
45177341 |
cgtcatttttgaacgaaaaccgaaacattttcactcttttctctccaaacactacaatcacaaattcagaactagaagcaatcccgtgcacacgaattcc |
45177242 |
T |
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| Q |
330 |
atcgaaaaccgaaaacgatttcattatcttcccaaattctaagtcgtacaacagaatttccgaacccaaacct |
402 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45177241 |
atcgaaaaccgaaaacgatttcattatcttcccaaattctaagtcgtacaacagaatttccgaacccaaacct |
45177169 |
T |
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