View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_high_21 (Length: 384)
Name: NF5265_high_21
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 27764566 - 27764199
Alignment:
| Q |
1 |
ttagagatagaaatataattactatcatatcaaataaaggatcaatataattgcataccttggcactgatagagtagaacaccaaaggttgtatggtagt |
100 |
Q |
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| T |
27764566 |
ttagagatagaaatataattactatcatatcaaataaaggatcaatataattgcataccttggcactgatagagtagaacaccaaaggttgtatggtagt |
27764467 |
T |
|
| Q |
101 |
gacattgagatgtaggatactaaggaagagtgtttgaaaaccagccactaatttagttagttgtcctggtcttgtcctagtgagaattctaaggtttgca |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27764466 |
gacattgagatgtaggatactaaggaagagtctttgaaaaccagccactaatttagttagttgtcctggtcttgtcctagtgagaattctaaggtttgca |
27764367 |
T |
|
| Q |
201 |
tgagtctcgatcaatgtaacctcgatatcagctatggcagctttggtcttggatgtgtatttgttaggtgtttgggaccatgtatattgaggatacacaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27764366 |
tgagtctcgatcaatgtaacctcgatatcagctatggcagctttggtcttggatgtgtatttgttaggtgtttgggaccatgtatattgaggatacacaa |
27764267 |
T |
|
| Q |
301 |
aaaattgtgcaaaaggtggttttgatattgccatgtcttcattgttttgtgttacttcttgttgtaca |
368 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27764266 |
aaaattgtgcaaaaggtggttttgatattgccatgtcttcattgttttgtgttacttcttgttgtaca |
27764199 |
T |
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