View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_high_72 (Length: 240)
Name: NF5265_high_72
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_high_72 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 5395849 - 5396073
Alignment:
| Q |
16 |
caccatgtgccaccacaaccacagtggcaacactaaccgcaacaacaatattaacagtagcttgcgtaagaagcaacaaagccaccgtaacaaacgccat |
115 |
Q |
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| T |
5395849 |
caccatgtgccaccacaaccacagtggcaacactaaccgcaacaacaatattaacagtagcttgcgtaagaagcaacaaagccaccgtaacaaacgccat |
5395948 |
T |
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| Q |
116 |
gagaacaaccacaattcgatcatcaacaagccgaccccataaaatcaccggctgatcacggaggaagtagaagaacaaccatgccgccattaggataacg |
215 |
Q |
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| T |
5395949 |
gagaacaaccacaattcgatcatcaacaagccgaccccataaaatcaccggctgatcacggaggaagtagaagaacaaccatgccgccattaggataacg |
5396048 |
T |
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| Q |
216 |
aaaacaatgagtgagtaaggatgcc |
240 |
Q |
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||||||||||||||||||||||||| |
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| T |
5396049 |
aaaacaatgagtgagtaaggatgcc |
5396073 |
T |
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