View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_high_89 (Length: 209)
Name: NF5265_high_89
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_high_89 |
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Alignment Details
Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 29189351 - 29189504
Alignment:
| Q |
14 |
aagaatattctactagatgacacttggcaccactatgatctaattctacttgtttgtgatcttggtctatatttagattgatagtgaatcttgtagaatc |
113 |
Q |
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| T |
29189351 |
aagaatattctactagatgacacttggcaccactatgatctaattctacttgtttgtgatcttggtctatatttagattgatagtgaatcttgtagaatc |
29189450 |
T |
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| Q |
114 |
acactttgccatcatgattttgagaaaagtcacactttgaaacttcattagaat |
167 |
Q |
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| T |
29189451 |
acactttgccatcatgattttgagaaaagtcacactttgaaacttcaatagaat |
29189504 |
T |
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