View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_low_23 (Length: 373)
Name: NF5265_low_23
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 12 - 356
Target Start/End: Original strand, 15663602 - 15663946
Alignment:
| Q |
12 |
tatactccaatcgttttcctcgagtatttctttacatctaggaaacaaataccatgccatctcactgtttgcttgtaaagcagccaagtaaagaggagta |
111 |
Q |
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| T |
15663602 |
tatactccaatcgttttcctcgagtatttctttacatttaggaaacaaatacgatgccatctcactgtttgcttgtaaagcagccaagtaaagaggagta |
15663701 |
T |
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| Q |
112 |
acacctagtccacccctaattgatggtaactcttcattctttttgaccattatctcagcgatttgaacatttccaaccgctgcagcaaagcaaagagcag |
211 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15663702 |
acacctagtccacccctaattgatggtaacacttcattctttttcaccattatctcagcgatttgaacatttccaaccgctgcagcaaagcaaagagcag |
15663801 |
T |
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| Q |
212 |
tgtttcccgggtaatcttgcaattccaaatcatcacgatccattagttttaccaattcctccacaaagtgaacatgatttgctcccgctgcaatatggag |
311 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15663802 |
tgtttcccgggtaatcttgcaatcccaaatcatcacgatccattagttttaccaattcctccacaaagtgaacatgatttgctcccgctgcaatatggag |
15663901 |
T |
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| Q |
312 |
tgcggttgcccacccatttgttatggcagaaatcagcaatgtttg |
356 |
Q |
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| T |
15663902 |
tgcggttgcccacccatttgttatggcagaaatcagcaatgtttg |
15663946 |
T |
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