View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_low_27 (Length: 341)
Name: NF5265_low_27
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 323
Target Start/End: Original strand, 25251186 - 25251500
Alignment:
| Q |
9 |
agcagagagaatgaatggcgtcatacagttgttccaaagataagatttcattgaagtattaggtggaacgaataatgcttctttgccaaactatcaatat |
108 |
Q |
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| T |
25251186 |
agcagagagaatgaatggcgtcatacggttgttccaaagataagatttcattgaagtattaggtggaacgaataatgcttctttgccaaactatcaatac |
25251285 |
T |
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| Q |
109 |
caaattgatacttttcagatttaagacagtagaaatatatactcattcttcaccattaagagatataataaaattattgacggcttcacgtaatatttta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25251286 |
caaattgatacttttcagatttaagacagtagaaatatatactcattcttcaccattaagagatataataaaattattgacggcttcacgtaatatttta |
25251385 |
T |
|
| Q |
209 |
agtttccgagataattgaccattaacatttagtaagaataaatatgaagaacaaatacttaccatgttgcagaatgtaacctgttgctgctgttccaaga |
308 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25251386 |
agtttctgagataattgaccattaacatttagtaagaataaatatgaagaacaaatacttaccatgttgcagaatgtaacctgttgctgctgttccaaga |
25251485 |
T |
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| Q |
309 |
acaccagccagtact |
323 |
Q |
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||||||||||||||| |
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| T |
25251486 |
acaccagccagtact |
25251500 |
T |
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