View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5265_low_29 (Length: 338)

Name: NF5265_low_29
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5265_low_29
NF5265_low_29
[»] chr6 (51 HSPs)
chr6 (15-303)||(26800586-26800875)
chr6 (59-304)||(21588974-21589219)
chr6 (59-304)||(22424703-22424952)
chr6 (59-304)||(5043670-5043917)
chr6 (59-304)||(17758066-17758313)
chr6 (59-304)||(2972815-2973064)
chr6 (59-273)||(3808615-3808834)
chr6 (59-264)||(17763033-17763239)
chr6 (59-208)||(21593707-21593855)
chr6 (59-304)||(26830000-26830248)
chr6 (59-177)||(26954294-26954411)
chr6 (59-193)||(28137400-28137533)
chr6 (71-175)||(5413403-5413507)
chr6 (59-264)||(603005-603213)
chr6 (65-175)||(9183041-9183150)
chr6 (71-160)||(5406224-5406313)
chr6 (71-160)||(5410549-5410638)
chr6 (71-184)||(31404675-31404788)
chr6 (59-175)||(33211195-33211310)
chr6 (92-175)||(5409078-5409162)
chr6 (71-184)||(2171532-2171644)
chr6 (71-175)||(30834545-30834649)
chr6 (71-155)||(33160381-33160465)
chr6 (74-184)||(412158-412270)
chr6 (74-184)||(3072759-3072871)
chr6 (59-160)||(3038927-3039028)
chr6 (71-184)||(16452329-16452442)
chr6 (103-184)||(6097451-6097533)
chr6 (102-175)||(16569107-16569180)
chr6 (60-158)||(4045467-4045566)
chr6 (71-184)||(16578518-16578632)
chr6 (71-184)||(16616748-16616862)
chr6 (71-184)||(16653166-16653280)
chr6 (71-184)||(16554923-16555037)
chr6 (71-184)||(16631479-16631593)
chr6 (59-195)||(25073611-25073748)
chr6 (71-184)||(27647915-27648028)
chr6 (108-184)||(25421396-25421474)
chr6 (94-292)||(9572667-9572869)
chr6 (18-63)||(17757903-17757948)
chr6 (18-63)||(17762808-17762853)
chr6 (108-184)||(6027337-6027415)
chr6 (108-175)||(13154005-13154074)
chr6 (108-175)||(33342114-33342183)
chr6 (108-175)||(34164948-34165017)
chr6 (18-63)||(3809012-3809057)
chr6 (18-63)||(5043446-5043491)
chr6 (119-184)||(34167183-34167248)
chr6 (287-324)||(602967-603004)
chr6 (18-63)||(603384-603429)
chr6 (140-184)||(4641090-4641134)
[»] chr1 (87 HSPs)
chr1 (59-324)||(47255196-47255465)
chr1 (59-322)||(13548861-13549125)
chr1 (59-324)||(13546952-13547214)
chr1 (59-322)||(31925569-31925832)
chr1 (59-301)||(47115214-47115458)
chr1 (59-304)||(37168340-37168584)
chr1 (59-304)||(29136290-29136536)
chr1 (94-304)||(28242382-28242594)
chr1 (59-324)||(42297832-42298100)
chr1 (59-304)||(7482109-7482356)
chr1 (59-304)||(11348741-11348989)
chr1 (59-304)||(37032948-37033198)
chr1 (93-306)||(37876644-37876858)
chr1 (59-260)||(19754538-19754737)
chr1 (62-204)||(193657-193799)
chr1 (59-184)||(8550787-8550912)
chr1 (61-273)||(6808497-6808710)
chr1 (59-277)||(34603619-34603822)
chr1 (59-199)||(22079359-22079501)
chr1 (59-184)||(3189373-3189498)
chr1 (59-184)||(3198190-3198315)
chr1 (59-184)||(3207029-3207154)
chr1 (59-160)||(46064961-46065062)
chr1 (59-175)||(28220236-28220351)
chr1 (59-175)||(28265564-28265679)
chr1 (245-324)||(194750-194830)
chr1 (59-177)||(49918393-49918510)
chr1 (59-175)||(834177-834292)
chr1 (59-175)||(3156908-3157023)
chr1 (59-195)||(15820350-15820485)
chr1 (61-264)||(19752731-19752930)
chr1 (59-175)||(31659281-31659396)
chr1 (64-175)||(28223431-28223541)
chr1 (71-177)||(20762727-20762833)
chr1 (71-184)||(13316352-13316465)
chr1 (62-175)||(13659346-13659458)
chr1 (59-160)||(44455203-44455304)
chr1 (68-160)||(1833574-1833666)
chr1 (59-175)||(4552647-4552762)
chr1 (59-175)||(45644364-45644479)
chr1 (66-191)||(5459956-5460081)
chr1 (59-145)||(16455664-16455750)
chr1 (59-177)||(50167183-50167300)
chr1 (71-184)||(51765450-51765565)
chr1 (59-177)||(37503565-37503679)
chr1 (59-184)||(50169211-50169335)
chr1 (59-175)||(13137986-13138101)
chr1 (59-194)||(23555257-23555390)
chr1 (59-177)||(41360957-41361074)
chr1 (59-194)||(37282682-37282817)
chr1 (59-184)||(196908-197033)
chr1 (59-177)||(40122204-40122323)
chr1 (120-212)||(2926613-2926706)
chr1 (59-146)||(10925266-10925356)
chr1 (59-175)||(37559877-37559994)
chr1 (59-195)||(927966-928101)
chr1 (58-193)||(2262965-2263101)
chr1 (59-175)||(3847131-3847246)
chr1 (61-239)||(12318468-12318646)
chr1 (74-184)||(40282435-40282545)
chr1 (75-167)||(13938195-13938288)
chr1 (103-184)||(9987287-9987369)
chr1 (103-184)||(20622237-20622319)
chr1 (64-144)||(30476486-30476566)
chr1 (71-184)||(9036471-9036584)
chr1 (64-250)||(9109352-9109540)
chr1 (108-184)||(44203722-44203800)
chr1 (103-160)||(36683766-36683824)
chr1 (18-63)||(7482534-7482579)
chr1 (18-63)||(19754310-19754355)
chr1 (103-175)||(21054044-21054117)
chr1 (18-63)||(37168116-37168161)
chr1 (18-63)||(37879215-37879260)
chr1 (18-63)||(28242207-28242252)
chr1 (18-63)||(37033377-37033422)
chr1 (18-63)||(42298279-42298324)
chr1 (18-63)||(47114990-47115035)
chr1 (22-62)||(13547394-13547434)
chr1 (22-62)||(13549305-13549345)
chr1 (59-140)||(3460739-3460821)
chr1 (119-157)||(8871089-8871127)
chr1 (22-63)||(11348521-11348562)
chr1 (18-63)||(31926010-31926055)
chr1 (59-88)||(37879007-37879036)
chr1 (59-194)||(44650153-44650288)
chr1 (61-109)||(1050520-1050567)
chr1 (65-109)||(25652135-25652178)
[»] chr4 (93 HSPs)
chr4 (59-304)||(379423-379669)
chr4 (59-306)||(12073435-12073683)
chr4 (60-324)||(35662485-35662749)
chr4 (59-253)||(46703543-46703738)
chr4 (59-304)||(41964458-41964702)
chr4 (59-303)||(50673728-50673972)
chr4 (59-304)||(2209756-2210007)
chr4 (59-306)||(40632488-40632735)
chr4 (61-304)||(8665453-8665693)
chr4 (59-264)||(6655999-6656203)
chr4 (59-324)||(41639469-41639737)
chr4 (59-304)||(8648182-8648432)
chr4 (59-324)||(26699302-26699568)
chr4 (65-324)||(33989893-33990153)
chr4 (59-304)||(50262575-50262826)
chr4 (59-273)||(54883063-54883278)
chr4 (59-273)||(12119582-12119801)
chr4 (59-300)||(26364279-26364522)
chr4 (59-264)||(27416886-27417090)
chr4 (59-184)||(56178637-56178762)
chr4 (61-253)||(33089923-33090117)
chr4 (59-175)||(48893648-48893763)
chr4 (59-175)||(9927468-9927583)
chr4 (59-175)||(26175646-26175761)
chr4 (60-195)||(31474195-31474329)
chr4 (59-192)||(37229714-37229847)
chr4 (59-160)||(48143086-48143187)
chr4 (59-175)||(5429722-5429837)
chr4 (59-195)||(6542169-6542304)
chr4 (71-186)||(29999804-29999920)
chr4 (59-175)||(36463399-36463514)
chr4 (59-175)||(37740668-37740783)
chr4 (59-175)||(46147401-46147516)
chr4 (74-184)||(13992293-13992402)
chr4 (59-175)||(47038421-47038535)
chr4 (71-175)||(5370092-5370196)
chr4 (59-175)||(36994567-36994682)
chr4 (74-184)||(31495316-31495428)
chr4 (59-158)||(34570440-34570539)
chr4 (62-195)||(4588005-4588137)
chr4 (65-196)||(22882740-22882870)
chr4 (65-196)||(22934404-22934534)
chr4 (71-175)||(12743935-12744038)
chr4 (71-175)||(12745324-12745427)
chr4 (71-195)||(52095352-52095475)
chr4 (59-142)||(24969155-24969238)
chr4 (59-160)||(54199930-54200031)
chr4 (71-175)||(12739560-12739663)
chr4 (59-175)||(45687192-45687307)
chr4 (59-146)||(3913491-3913578)
chr4 (59-304)||(21688292-21688534)
chr4 (71-184)||(8393448-8393562)
chr4 (71-184)||(8395657-8395771)
chr4 (71-144)||(12744087-12744160)
chr4 (59-175)||(52467364-52467479)
chr4 (60-175)||(29254538-29254652)
chr4 (74-144)||(12745476-12745546)
chr4 (59-160)||(5871863-5871964)
chr4 (71-146)||(12747794-12747869)
chr4 (93-160)||(13009468-13009536)
chr4 (62-191)||(21703829-21703958)
chr4 (61-173)||(34112862-34112973)
chr4 (187-322)||(55085304-55085439)
chr4 (59-160)||(5207866-5207967)
chr4 (220-304)||(46703752-46703838)
chr4 (92-195)||(51337139-51337242)
chr4 (140-212)||(38811162-38811235)
chr4 (18-63)||(40630803-40630848)
chr4 (61-195)||(44967818-44967952)
chr4 (18-63)||(50674150-50674195)
chr4 (108-160)||(7124992-7125046)
chr4 (17-63)||(379197-379243)
chr4 (108-175)||(5136155-5136224)
chr4 (108-175)||(5138380-5138449)
chr4 (61-118)||(44570432-44570489)
chr4 (18-63)||(8647957-8648002)
chr4 (18-63)||(8665226-8665271)
chr4 (18-63)||(26364084-26364129)
chr4 (18-63)||(33989681-33989726)
chr4 (18-63)||(41964234-41964279)
chr4 (277-322)||(54881565-54881610)
chr4 (61-143)||(6677514-6677597)
chr4 (61-109)||(34788851-34788898)
chr4 (108-160)||(7122773-7122827)
chr4 (18-63)||(6655775-6655820)
chr4 (22-63)||(12073215-12073256)
chr4 (97-191)||(35369440-35369534)
chr4 (18-63)||(54882839-54882884)
chr4 (59-108)||(55085442-55085490)
chr4 (18-63)||(55085669-55085714)
chr4 (65-109)||(32091527-32091570)
chr4 (69-195)||(37754949-37755076)
chr4 (18-54)||(50263011-50263047)
[»] chr7 (83 HSPs)
chr7 (59-324)||(8359174-8359442)
chr7 (59-322)||(32357916-32358179)
chr7 (59-306)||(4508584-4508831)
chr7 (59-304)||(29608780-29609026)
chr7 (65-303)||(34310595-34310835)
chr7 (58-321)||(6359812-6360078)
chr7 (59-268)||(22328306-22328516)
chr7 (59-304)||(48599213-48599459)
chr7 (59-306)||(4510426-4510673)
chr7 (59-306)||(4512268-4512515)
chr7 (59-304)||(3259038-3259283)
chr7 (59-304)||(2390325-2390574)
chr7 (59-324)||(2360836-2361097)
chr7 (59-195)||(22270016-22270151)
chr7 (59-184)||(23555083-23555208)
chr7 (59-175)||(6432014-6432129)
chr7 (59-160)||(19502221-19502322)
chr7 (59-184)||(30024733-30024857)
chr7 (59-160)||(23565085-23565186)
chr7 (59-195)||(31518946-31519081)
chr7 (71-184)||(35853969-35854082)
chr7 (59-175)||(27347860-27347975)
chr7 (59-193)||(31105385-31105518)
chr7 (71-184)||(29991108-29991221)
chr7 (59-160)||(48491622-48491723)
chr7 (59-175)||(2759207-2759322)
chr7 (63-175)||(25615900-25616012)
chr7 (59-175)||(31732979-31733094)
chr7 (74-184)||(39731426-39731537)
chr7 (59-146)||(47673981-47674068)
chr7 (64-175)||(48489479-48489589)
chr7 (59-177)||(36146416-36146532)
chr7 (59-160)||(496007-496108)
chr7 (59-160)||(1113700-1113801)
chr7 (59-195)||(4253518-4253654)
chr7 (71-160)||(8153397-8153486)
chr7 (71-160)||(25766984-25767074)
chr7 (71-175)||(14069843-14069946)
chr7 (71-175)||(14379871-14379974)
chr7 (59-175)||(41317444-41317559)
chr7 (59-146)||(4586204-4586291)
chr7 (59-146)||(26417359-26417446)
chr7 (65-184)||(47676137-47676255)
chr7 (59-160)||(18126687-18126788)
chr7 (59-175)||(41649021-41649135)
chr7 (59-175)||(43864287-43864402)
chr7 (74-160)||(43504178-43504266)
chr7 (71-184)||(20343951-20344064)
chr7 (59-195)||(23344018-23344151)
chr7 (65-175)||(18396367-18396477)
chr7 (93-160)||(24525526-24525594)
chr7 (71-195)||(48408857-48408984)
chr7 (75-175)||(3904626-3904726)
chr7 (59-175)||(38671232-38671347)
chr7 (71-184)||(24789896-24790009)
chr7 (103-175)||(1560675-1560749)
chr7 (71-160)||(4178829-4178917)
chr7 (59-191)||(36574510-36574641)
chr7 (59-177)||(12097875-12097984)
chr7 (19-63)||(22269793-22269837)
chr7 (108-184)||(18388760-18388838)
chr7 (108-184)||(18392196-18392274)
chr7 (59-118)||(31518838-31518896)
chr7 (108-184)||(32060322-32060400)
chr7 (18-63)||(2361275-2361320)
chr7 (18-63)||(29608555-29608600)
chr7 (123-175)||(26639432-26639484)
chr7 (15-63)||(34311020-34311068)
chr7 (92-169)||(5116679-5116758)
chr7 (108-184)||(6592340-6592418)
chr7 (108-184)||(6594558-6594636)
chr7 (18-63)||(8359622-8359667)
chr7 (111-175)||(30814530-30814594)
chr7 (20-63)||(4512694-4512737)
chr7 (22-63)||(2390105-2390146)
chr7 (18-63)||(4509010-4509055)
chr7 (18-63)||(4510852-4510897)
chr7 (92-191)||(5513661-5513760)
chr7 (22-63)||(6360216-6360257)
chr7 (22-63)||(6431794-6431835)
chr7 (287-324)||(22270220-22270257)
chr7 (287-324)||(30814669-30814706)
chr7 (15-63)||(3258812-3258860)
[»] chr3 (91 HSPs)
chr3 (59-324)||(41819380-41819648)
chr3 (59-304)||(46860517-46860763)
chr3 (59-304)||(30236168-30236414)
chr3 (59-303)||(36018895-36019136)
chr3 (59-304)||(49199344-49199595)
chr3 (59-324)||(46173400-46173669)
chr3 (68-304)||(6095479-6095715)
chr3 (59-304)||(43401676-43401927)
chr3 (59-304)||(54593747-54593995)
chr3 (59-304)||(43403619-43403870)
chr3 (93-268)||(55301888-55302064)
chr3 (59-322)||(47304294-47304564)
chr3 (59-208)||(4569995-4570144)
chr3 (59-184)||(34491255-34491379)
chr3 (59-184)||(7762308-7762433)
chr3 (59-195)||(32891147-32891282)
chr3 (220-324)||(31340081-31340186)
chr3 (75-264)||(40913352-40913544)
chr3 (59-160)||(7764507-7764608)
chr3 (59-184)||(9581325-9581450)
chr3 (59-175)||(40735426-40735541)
chr3 (71-184)||(19683889-19684002)
chr3 (59-160)||(29810911-29811012)
chr3 (71-184)||(45095218-45095331)
chr3 (59-175)||(29813106-29813221)
chr3 (59-175)||(44331588-44331703)
chr3 (59-175)||(51398857-51398972)
chr3 (59-195)||(53921493-53921628)
chr3 (59-160)||(760890-760991)
chr3 (62-175)||(16499075-16499187)
chr3 (71-160)||(37408513-37408602)
chr3 (59-175)||(22835012-22835127)
chr3 (59-175)||(40734541-40734656)
chr3 (74-184)||(801148-801260)
chr3 (59-177)||(44700487-44700603)
chr3 (71-184)||(5258144-5258257)
chr3 (71-184)||(23197939-23198052)
chr3 (71-184)||(23200138-23200251)
chr3 (59-160)||(39153385-39153486)
chr3 (59-175)||(29196396-29196511)
chr3 (71-184)||(5260323-5260436)
chr3 (74-160)||(7780028-7780114)
chr3 (59-175)||(29682402-29682517)
chr3 (59-175)||(31314488-31314603)
chr3 (59-175)||(32744446-32744561)
chr3 (74-160)||(9636150-9636236)
chr3 (59-160)||(5236481-5236581)
chr3 (61-195)||(33191877-33192009)
chr3 (59-175)||(9666476-9666591)
chr3 (58-196)||(35138694-35138832)
chr3 (75-175)||(4055773-4055874)
chr3 (71-184)||(6716554-6716667)
chr3 (71-184)||(54635179-54635292)
chr3 (59-118)||(31340268-31340326)
chr3 (103-175)||(45283071-45283145)
chr3 (61-252)||(20937701-20937893)
chr3 (59-175)||(23391919-23392034)
chr3 (58-212)||(39127589-39127745)
chr3 (75-175)||(4075480-4075581)
chr3 (59-165)||(5433901-5434001)
chr3 (119-175)||(27305720-27305775)
chr3 (15-63)||(28074432-28074480)
chr3 (108-184)||(3617540-3617618)
chr3 (108-175)||(25637517-25637586)
chr3 (18-63)||(4569770-4569815)
chr3 (15-63)||(46860287-46860335)
chr3 (59-145)||(51352150-51352235)
chr3 (108-175)||(4598532-4598601)
chr3 (108-175)||(10056309-10056378)
chr3 (108-175)||(10058531-10058600)
chr3 (108-175)||(10060753-10060822)
chr3 (108-175)||(10062975-10063044)
chr3 (108-175)||(10065197-10065266)
chr3 (108-175)||(10211485-10211554)
chr3 (59-160)||(23410353-23410454)
chr3 (18-63)||(6095903-6095948)
chr3 (119-195)||(2075065-2075140)
chr3 (15-63)||(36018667-36018715)
chr3 (15-63)||(54593521-54593569)
chr3 (20-63)||(5434181-5434224)
chr3 (108-160)||(10209265-10209319)
chr3 (108-175)||(4600753-4600822)
chr3 (18-60)||(49199778-49199820)
chr3 (22-63)||(34491036-34491077)
chr3 (287-324)||(34491459-34491496)
chr3 (18-63)||(40913158-40913203)
chr3 (287-320)||(40913545-40913578)
chr3 (22-63)||(43404037-43404078)
chr3 (224-322)||(5270580-5270680)
chr3 (65-105)||(24635306-24635345)
chr3 (61-150)||(25491003-25491091)
[»] chr5 (65 HSPs)
chr5 (60-318)||(27637477-27637737)
chr5 (59-264)||(40147304-40147508)
chr5 (59-305)||(213508-213758)
chr5 (59-324)||(5058088-5058358)
chr5 (93-324)||(27015599-27015831)
chr5 (59-195)||(13239794-13239930)
chr5 (59-304)||(16640818-16641062)
chr5 (59-195)||(28278359-28278494)
chr5 (60-195)||(16452124-16452258)
chr5 (61-267)||(316807-317014)
chr5 (75-184)||(37439200-37439309)
chr5 (59-195)||(9049332-9049467)
chr5 (59-184)||(538068-538192)
chr5 (71-160)||(25412815-25412904)
chr5 (59-175)||(13488246-13488361)
chr5 (59-175)||(42428440-42428555)
chr5 (118-267)||(4160701-4160850)
chr5 (71-184)||(13343116-13343228)
chr5 (71-184)||(36074043-36074155)
chr5 (59-175)||(533812-533927)
chr5 (74-184)||(9789224-9789335)
chr5 (74-184)||(16409532-16409643)
chr5 (74-184)||(26177939-26178050)
chr5 (59-177)||(8565954-8566071)
chr5 (59-195)||(13695680-13695816)
chr5 (71-184)||(30182643-30182756)
chr5 (59-160)||(33831723-33831824)
chr5 (59-156)||(42309963-42310060)
chr5 (71-175)||(32636879-32636982)
chr5 (65-177)||(42426243-42426354)
chr5 (74-184)||(18441648-18441759)
chr5 (59-175)||(30682932-30683049)
chr5 (59-146)||(39468587-39468674)
chr5 (65-173)||(28750667-28750774)
chr5 (59-146)||(38747048-38747135)
chr5 (71-184)||(10593312-10593426)
chr5 (103-184)||(26170848-26170930)
chr5 (59-195)||(3075648-3075783)
chr5 (61-172)||(33906042-33906154)
chr5 (235-322)||(40751195-40751284)
chr5 (65-177)||(10054823-10054935)
chr5 (59-175)||(31183015-31183129)
chr5 (74-184)||(29722582-29722692)
chr5 (74-184)||(29751160-29751270)
chr5 (71-184)||(22536290-22536403)
chr5 (91-195)||(30793210-30793314)
chr5 (61-165)||(3325958-3326063)
chr5 (60-118)||(42926911-42926968)
chr5 (74-184)||(29720422-29720532)
chr5 (108-184)||(25078211-25078289)
chr5 (108-184)||(25136180-25136258)
chr5 (108-184)||(40380181-40380259)
chr5 (108-184)||(40382392-40382470)
chr5 (93-195)||(42926967-42927069)
chr5 (18-63)||(213288-213333)
chr5 (18-63)||(27015351-27015396)
chr5 (18-63)||(28278135-28278180)
chr5 (18-63)||(40147080-40147125)
chr5 (235-307)||(40763200-40763273)
chr5 (119-175)||(19806466-19806521)
chr5 (61-253)||(10700580-10700771)
chr5 (108-175)||(16544499-16544568)
chr5 (108-175)||(16546721-16546790)
chr5 (63-109)||(14689503-14689548)
chr5 (18-63)||(38746824-38746869)
[»] scaffold0466 (2 HSPs)
scaffold0466 (59-324)||(7370-7637)
scaffold0466 (22-63)||(7151-7192)
[»] chr8 (67 HSPs)
chr8 (59-305)||(4283567-4283813)
chr8 (59-304)||(40328822-40329064)
chr8 (59-324)||(42434846-42435116)
chr8 (59-301)||(18655443-18655688)
chr8 (59-304)||(11384028-11384273)
chr8 (59-304)||(3772235-3772480)
chr8 (59-264)||(40221788-40221992)
chr8 (59-264)||(10930118-10930324)
chr8 (59-184)||(42498237-42498362)
chr8 (59-195)||(1292454-1292588)
chr8 (59-152)||(30143383-30143476)
chr8 (59-175)||(3303680-3303795)
chr8 (59-175)||(15212829-15212944)
chr8 (59-175)||(27811321-27811436)
chr8 (59-175)||(33352193-33352308)
chr8 (59-175)||(43036466-43036581)
chr8 (71-160)||(19945383-19945473)
chr8 (75-184)||(34256507-34256616)
chr8 (71-184)||(44303910-44304023)
chr8 (59-175)||(5689314-5689429)
chr8 (61-175)||(7597659-7597774)
chr8 (74-175)||(2627792-2627895)
chr8 (59-173)||(4731701-4731814)
chr8 (64-173)||(4162545-4162652)
chr8 (75-184)||(17982712-17982821)
chr8 (59-160)||(18141863-18141964)
chr8 (71-184)||(31218312-31218425)
chr8 (75-184)||(34254331-34254440)
chr8 (63-195)||(10015128-10015257)
chr8 (59-175)||(12702644-12702759)
chr8 (59-175)||(40321123-40321238)
chr8 (59-146)||(30291650-30291737)
chr8 (59-177)||(19491707-19491824)
chr8 (71-184)||(1746219-1746331)
chr8 (71-184)||(3439558-3439671)
chr8 (59-146)||(44353836-44353923)
chr8 (59-177)||(1345379-1345496)
chr8 (65-195)||(8153807-8153936)
chr8 (61-175)||(18106091-18106201)
chr8 (64-175)||(29796329-29796442)
chr8 (66-166)||(32902191-32902292)
chr8 (62-175)||(41366625-41366736)
chr8 (61-191)||(11711993-11712124)
chr8 (61-175)||(6599017-6599130)
chr8 (61-175)||(6674470-6674583)
chr8 (76-189)||(3073870-3073981)
chr8 (95-175)||(4733784-4733864)
chr8 (103-175)||(4743224-4743296)
chr8 (71-184)||(25690009-25690122)
chr8 (181-264)||(2999723-2999806)
chr8 (71-175)||(9765800-9765902)
chr8 (60-175)||(8965701-8965815)
chr8 (59-146)||(1822335-1822423)
chr8 (59-146)||(1856780-1856868)
chr8 (119-175)||(38863961-38864017)
chr8 (15-63)||(40328595-40328643)
chr8 (108-175)||(15290614-15290683)
chr8 (108-175)||(15470983-15471052)
chr8 (108-175)||(42575333-42575402)
chr8 (18-63)||(40221564-40221609)
chr8 (59-109)||(3231872-3231921)
chr8 (59-89)||(10929842-10929872)
chr8 (94-135)||(10929865-10929907)
chr8 (61-136)||(30909413-30909487)
chr8 (15-59)||(2999828-2999872)
chr8 (59-118)||(10240197-10240256)
chr8 (156-208)||(10240263-10240315)
[»] chr2 (54 HSPs)
chr2 (59-306)||(45726972-45727217)
chr2 (59-322)||(35446745-35447009)
chr2 (59-297)||(33648214-33648454)
chr2 (22-304)||(7451123-7451407)
chr2 (110-307)||(17450671-17450868)
chr2 (59-207)||(1631710-1631857)
chr2 (59-203)||(24398100-24398246)
chr2 (59-175)||(2334427-2334543)
chr2 (59-304)||(42287990-42288235)
chr2 (59-184)||(36988076-36988201)
chr2 (59-190)||(17490143-17490273)
chr2 (62-175)||(17057379-17057491)
chr2 (62-175)||(17085362-17085474)
chr2 (59-175)||(6595015-6595131)
chr2 (59-175)||(36773605-36773720)
chr2 (59-175)||(723754-723869)
chr2 (61-273)||(30217956-30218168)
chr2 (59-177)||(33162458-33162575)
chr2 (71-184)||(4503133-4503245)
chr2 (71-184)||(5723256-5723369)
chr2 (71-184)||(45099810-45099922)
chr2 (62-146)||(7815311-7815395)
chr2 (59-175)||(36318019-36318134)
chr2 (59-160)||(42362395-42362496)
chr2 (59-175)||(11067348-11067463)
chr2 (59-175)||(38312283-38312398)
chr2 (59-174)||(26353227-26353341)
chr2 (71-160)||(4484354-4484444)
chr2 (59-175)||(14633835-14633951)
chr2 (59-175)||(34139780-34139896)
chr2 (59-175)||(11151601-11151716)
chr2 (71-175)||(29867924-29868027)
chr2 (121-173)||(28672036-28672088)
chr2 (74-184)||(32289621-32289732)
chr2 (75-160)||(30833404-30833490)
chr2 (62-195)||(42019859-42019995)
chr2 (59-160)||(11049596-11049698)
chr2 (71-184)||(36205665-36205777)
chr2 (59-184)||(11690544-11690668)
chr2 (59-150)||(13121812-13121901)
chr2 (74-184)||(6266749-6266859)
chr2 (71-175)||(13656041-13656146)
chr2 (108-184)||(12647386-12647464)
chr2 (18-63)||(1632036-1632081)
chr2 (18-63)||(35447188-35447233)
chr2 (111-175)||(39284930-39284994)
chr2 (18-63)||(42288414-42288459)
chr2 (64-176)||(7597020-7597131)
chr2 (59-146)||(14202450-14202530)
chr2 (61-145)||(42261524-42261609)
chr2 (119-160)||(42412121-42412161)
chr2 (65-109)||(4561137-4561180)
chr2 (61-112)||(34811295-34811345)
chr2 (20-63)||(45726750-45726793)
[»] scaffold0176 (1 HSPs)
scaffold0176 (59-304)||(17882-18128)
[»] scaffold0236 (1 HSPs)
scaffold0236 (73-304)||(10546-10778)
[»] scaffold0219 (1 HSPs)
scaffold0219 (61-187)||(27439-27566)
[»] scaffold0286 (2 HSPs)
scaffold0286 (71-184)||(11612-11725)
scaffold0286 (18-63)||(11377-11422)
[»] scaffold0016 (1 HSPs)
scaffold0016 (71-184)||(114657-114770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (71-184)||(434588-434701)
scaffold0002 (61-145)||(490359-490444)
[»] scaffold0006 (1 HSPs)
scaffold0006 (62-175)||(149107-149219)
[»] scaffold0066 (1 HSPs)
scaffold0066 (59-175)||(20425-20540)
[»] scaffold1519 (1 HSPs)
scaffold1519 (71-184)||(971-1083)
[»] scaffold0491 (2 HSPs)
scaffold0491 (74-184)||(8735-8846)
scaffold0491 (74-184)||(11161-11272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (108-175)||(3735-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (108-184)||(2604-2682)
[»] scaffold0014 (2 HSPs)
scaffold0014 (59-117)||(80351-80408)
scaffold0014 (18-63)||(80587-80632)
[»] scaffold0137 (1 HSPs)
scaffold0137 (108-175)||(6363-6432)
[»] scaffold0477 (1 HSPs)
scaffold0477 (140-184)||(6981-7025)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 303
Target Start/End: Original strand, 26800586 - 26800875
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaact 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800586 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaact 26800685  T
Q  115 cattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnn 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      
T  26800686 cattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctctactc 26800785  T
Q  215 nnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatattattgttgttgcttgtggt 303  Q
         |||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||| |||| ||| ||||| |||||||||||    
T  26800786 tttttatcttgtttatcttttggttagattgtggttttgctatgcacttgttttctagactagatctagattgttgttattgcttgtggt 26800875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 21588974 - 21589219
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21588974 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 21589072  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | || ||| ||||||||||||| |||    
T  21589073 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttccttatcttgtttattccttagttggattgtggttttgctat 21589171  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  21589172 gcacttggtttatagactaggtctatattgttgttattgcttgtggtt 21589219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 22424952 - 22424703
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaatttt-gtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22424952 gtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgtaagaactcattatagtggattggagagatcaatctctccttcagagtagg 22424853  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtt-- 255  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||| ||      
T  22424852 tcattgttggaccgtactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttgtttatccttaggttagattgtggtttttttca 22424753  T
Q  256 atgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    ||||||||||||| || | ||| |||| ||| ||||||||| ||||||||    
T  22424752 atgcacttggtttctatattagatctagattgttgttgttgtttgtggtt 22424703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 5043670 - 5043917
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  5043670 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtagattggagagatcaatctctcctccatagtagg 5043768  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||||   |||||| ||||||||||||| |||    
T  5043769 tcattgttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatttcttggttggattgtggttttgctat 5043868  T
Q  258 gcacttggtttatagactag---tctatattattgttgttgcttgtggtt 304  Q
    ||||||| || ||||| |||   | |||||| ||||||||||||| ||||    
T  5043869 gcacttgatt-atagaataggtctatatattgttgttgttgcttgaggtt 5043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 17758066 - 17758313
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||     
T  17758066 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagt 17758164  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||   |||||||||||||| ||||||||||||||||||||||||||| | | |||       |||||||||||||||||||||||||||||||||| ||    
T  17758165 tcaagtttggaccgaactaggtgaacatttcttggtgttgttatctttccttttacgctctttatcttgtttatcctttggttagattgtggttttgcta 17758264  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||||||| ||| |||| ||| |||| ||| ||||| ||||||| ||||    
T  17758265 tgcacttgttttctagattagatctagattgttgttattgcttgcggtt 17758313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 2973064 - 2972815
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2973064 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctcaagagtagg 2972966  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatctttt----ctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||  ||| ||||||||||| ||||||||||||||||||||||| ||||    |||| |       |||||||||||| ||||||||||||||||||||     
T  2972965 tca-agttcgaccgaactaggtgaacatttcttggtgttgttatttttttttactct-ctctctatatcttgtttatcatttggttagattgtggttttt 2972868  T
Q  254 t-tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    | ||||||||| |||||||||||| ||||||||| ||||||||| ||||||||    
T  2972867 tctatgcacttagtttatagactaggtctatattgttgttgttgtttgtggtt 2972815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 273
Target Start/End: Complemental strand, 3808834 - 3808615
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3808834 gtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 3808735  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    ||||  |||||||||||||| ||||| || |||||| |||||| ||   ||||||||||       ||||||||||||||||||||||||| ||||||||    
T  3808734 tcatgattggaccgaactaggtgaacaatctcttggggttgttgtctatttttctctactctctttatcttgtttatcctttggttagattatggttttg 3808635  T
Q  254 ttatgcacttggtttataga 273  Q
     |||||| ||| ||| ||||    
T  3808634 ctatgcatttgttttctaga 3808615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 264
Target Start/End: Original strand, 17763033 - 17763239
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||     
T  17763033 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctttttggaagaactcattgatagtggattggagtgatcaatctctcctccagagtaga 17763131  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||   |||||||||||||| ||||||||||||||||||||||||||||| | |||       |||||||| |||||||||||||||||| |||||| ||    
T  17763132 tcaagtttggaccgaactaggtgaacatttcttggtgttgttatcttttcttttactctctttatcttgttcatcctttggttagattgtagttttgcta 17763231  T
Q  257 tgcacttg 264  Q
    ||||||||    
T  17763232 tgcacttg 17763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 208
Target Start/End: Original strand, 21593707 - 21593855
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21593707 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 21593805  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 208  Q
    |||  ||||||||||||| | ||||||||||||||||||||||||||||||    
T  21593806 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttct 21593855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 26830248 - 26830000
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26830248 gtgagcttgttgaagctaatttcttgtaatccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccaaagtagg 26830150  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggttttgt 254  Q
    |||  ||| ||| ||||| | |||||||||||||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||||     
T  26830149 tca-agtttgactgaactgggtgaacatttcttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 26830051  T
Q  255 tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||||||||| || |||||| ||||| ||||||||||||    
T  26830050 tatgcacttggtttatagactaggtttatattgttgttattgcttgtggtt 26830000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 26954411 - 26954294
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  26954411 gtgagcttgttgaagctaatttcttgtaactcatct-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtagg 26954313  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  26954312 tca-agttggaccgaactag 26954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 28137533 - 28137400
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  28137533 gtgagcttgtttaagctaatttcttgtaacccattt-gtatttctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtagg 28137435  T
Q  158 tcattgttggaccgaactagatgaacatttcttggt 193  Q
    |||  ||||||||||| |   |||||||||||||||    
T  28137434 tca-agttggaccgaattgtgtgaacatttcttggt 28137400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 5413507 - 5413403
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  5413507 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggac 5413409  T
Q  170 cgaact 175  Q
    ||||||    
T  5413408 cgaact 5413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 264
Target Start/End: Complemental strand, 603213 - 603005
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||| |||||||||||| | ||| ||||    
T  603213 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattggagaaatcaatctctccccaagattagg 603115  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||  ||||||||||||| | | ||| || ||||| ||||||| ||   ||||||||||       ||||||||||| | |||||| ||||||||||||     
T  603114 tca-agttggaccgaactgggtcaacaatctcttgatgttgttgtctatttttctctactctctttatcttgtttatgccttggttggattgtggtttta 603016  T
Q  254 ttatgcacttg 264  Q
     ||||||||||    
T  603015 ctatgcacttg 603005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 9183150 - 9183041
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||  |    
T  9183150 ttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattatgtca-ag 9183053  T
Q  164 ttggaccgaact 175  Q
    ||||||||||||    
T  9183052 ttggaccgaact 9183041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 5406313 - 5406224
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5406313 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 5410638 - 5410549
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5410638 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 31404788 - 31404675
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||   ||||||    
T  31404788 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggac 31404690  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  31404689 cgaactgggtgaaca 31404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 33211310 - 33211195
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||| ||||| |||||||||||| || |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  33211310 gtgagcttgatgaagttaatttcttgtagctcattt-gtatctctttgtaagaactcatttataatggattggagagatcaatctctcccccagagtagg 33211212  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  33211211 tca-agttggaccgaact 33211195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 5409162 - 5409078
Alignment:
Q  92 ttttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  5409162 ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaact 5409078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 2171644 - 2171532
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  2171644 aagctaatttcttgtaaccc--tttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 2171547  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  2171546 cgaactgggtgaaca 2171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 30834649 - 30834545
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  30834649 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 30834551  T
Q  170 cgaact 175  Q
    ||||||    
T  30834550 cgaact 30834545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 33160465 - 33160381
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagta 155  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  33160465 aagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatggtggattggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 412158 - 412270
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||   ||||||||    
T  412158 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccg 412257  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  412258 aactgggtgaaca 412270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 3072871 - 3072759
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||||    
T  3072871 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccg 3072772  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  3072771 aactgggtgaaca 3072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 3039028 - 3038927
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatta-tagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||| |||||||||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| ||||    
T  3039028 gtgagctttttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttaatagtggattggagagattaatctctcccccagattagg 3038930  T
Q  158 tca 160  Q
    |||    
T  3038929 tca 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 16452442 - 16452329
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  16452442 aagctaatttcttgtaaccc-tttcatatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 16452344  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  16452343 cgaactgggtgaaca 16452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 6097533 - 6097451
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||||| | ||||||    
T  6097533 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 16569107 - 16569180
Alignment:
Q  102 ctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  16569107 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattaggtca-agttggaccgaact 16569180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 4045467 - 4045566
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||| || |||||||| |||||||||||||||||||||| ||| | ||| ||||||    
T  4045467 tgagcttgttgaagctaatttcttgtaa-tcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtagg 4045565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 16578632 - 16578518
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16578632 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16578535  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  16578534 accgaactgggtgaaca 16578518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 16616748 - 16616862
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16616748 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16616845  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  16616846 accgaactgggtgaaca 16616862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 16653166 - 16653280
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16653166 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16653263  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  16653264 accgaactgggtgaaca 16653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 16554923 - 16555037
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| |||||||||| |||||||||   ||||    
T  16554923 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttgg 16555020  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  16555021 accgaactgggtgaaca 16555037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 16631479 - 16631593
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| |||||||||| |||||||||   ||||    
T  16631479 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttgg 16631576  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  16631577 accgaactgggtgaaca 16631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 25073611 - 25073748
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||| |||||| ||| |||||||   |||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||| | || | |||    
T  25073611 gtgagcttgttaaagctattttattgtaaccc-ttttgtatctctatgtaaagaactcattgatagtggattagagaaatcaatctctcattcaaattag 25073709  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    || |||||| |||  |||||| | |||||||||||||||    
T  25073710 gttattgttagactaaactaggtaaacatttcttggtgt 25073748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 27647915 - 27648028
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| |||||||||||||||| |||   |||||    
T  27647915 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtagatcaagtttgga 27648012  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  27648013 ccgaactgggtgaaca 27648028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 25421396 - 25421474
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25421396 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 292
Target Start/End: Original strand, 9572667 - 9572869
Alignment:
Q  94 ttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagat-gaacatttctt 190  Q
    ||||| |||||||| |||||| |||| ||||||||||| |||||||||||||| ||  ||||||||||||  ||| | |||||| | |  || |||||||    
T  9572667 ttgtaactctttgttaagaacccattgatagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaaatatttctt 9572766  T
Q  191 ggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatattattg 289  Q
    | ||||||||||||||||||         ||||| | ||| ||||| || ||||||||| ||  |||||||||||||| |||| ||| |||| |||||||    
T  9572767 gatgttgttatcttttctctcgtgtctttatcttatctattctttgattcgattgtggtatttctatgcacttggtttctagattagatctagattattg 9572866  T
Q  290 ttg 292  Q
    |||    
T  9572867 ttg 9572869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 17757903 - 17757948
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17757903 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 17757948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 17762808 - 17762853
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17762808 tgggaaacacatgagtggagagtcttttgggagcaacttgggtgag 17762853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 6027337 - 6027415
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||   |||||||||||| | ||||||    
T  6027337 aagaactcatttgatagtggattggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaaca 6027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 13154005 - 13154074
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  13154005 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 13154074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 33342183 - 33342114
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  33342183 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 33342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 34164948 - 34165017
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  34164948 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 34165017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 3809057 - 3809012
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  3809057 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 3809012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5043446 - 5043491
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||    
T  5043446 tgggaaacacatgagtggagagtcttttgtgagcaatttgggtgag 5043491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 34167183 - 34167248
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  34167183 atagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 34167248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 603004 - 602967
Alignment:
Q  287 ttgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  603004 ttgttgttgcttgtggtttattttgattgttggttgcc 602967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 603429 - 603384
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||| |||  ||| ||||||||||||||||    
T  603429 tgggaaacacatgagtggagtgtcctttgtgagcaacttgggtgag 603384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 4641090 - 4641134
Alignment:
Q  140 tctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  4641090 tctctcctctagagtaggtcattattggaccgaactggataaaca 4641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 4e-97; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 47255465 - 47255196
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47255465 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 47255367  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctc---tacnnnnnnnatcttgtttatcctttggttagattgtggttttgt 254  Q
    |||||||||||||||||| | ||||||||||||||||||||||| |||| ||   |||       ||||||||||||||||||||||||||||||||||     
T  47255366 tcattgttggaccgaactgggtgaacatttcttggtgttgttattttttttcttttactctctttatcttgtttatcctttggttagattgtggttttgc 47255267  T
Q  255 tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  47255266 tatgcacttggtttatagactaggtctatattattgttgttgcttatggtttactttggttgttggttgcc 47255196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 59 - 322
Target Start/End: Complemental strand, 13549125 - 13548861
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| || |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13549125 gtgagcttgttaaacctaatttcatgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13549027  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||| ||||||||||||| |||    
T  13549026 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggttttgctat 13548928  T
Q  258 gcactt-ggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13548927 gcactttggtttatagactaggtctatattattgttgttgcttgtggtttactttggttgttggttg 13548861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 13547214 - 13546952
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13547214 gtgagcttgttgaagctattttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13547116  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||| |||||||||||||        
T  13547115 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggttttg---- 13547021  T
Q  258 gcacttggtttatagacta---gtctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
     ||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13547020 -cacttggtttataaactataggtctatattattgttgttgcttgtggtttactttggttgttggttgcc 13546952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 59 - 322
Target Start/End: Complemental strand, 31925832 - 31925569
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  31925832 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtagg 31925734  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgt-ttatcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||||| ||||||||||||||||||||||| |||||| |||       ||||||| |||| |||||||| ||||||||||||| ||    
T  31925733 tcaa-gttggaccgaactaggtgaacatttcttggtgttgttattttttctttactctcgttatcttgtattattctttggttggattgtggttttgcta 31925635  T
Q  257 tgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||    
T  31925634 tgcacttggtttatagactaggtctatattattgttattgcttgtgg-ttaatttggttgttggttg 31925569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 47115214 - 47115458
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  47115214 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctgctccagagtagg 47115313  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||||| |       |||||||||||||||| |||||||||||||||||||||    
T  47115314 tcattgttggaccgaactgggtgaacatttcttgatgttgttatcttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttat 47115413  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtg 301  Q
    ||||||| ||| |||| ||| |||| ||| ||||| |||||||||    
T  47115414 gcacttgttttctagattagatctagattgttgttattgcttgtg 47115458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 37168340 - 37168584
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37168340 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 37168439  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||    
T  37168440 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggtttgattgtggttttgctat 37168538  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||| | |||||||||| ||||||| ||||||||||||||| ||||    
T  37168539 gcactt-gattatagactaggtctata-tattgttgttgcttgaggtt 37168584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 29136290 - 29136536
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||| |||  |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29136290 gtgagcttgttgaagctaatttcttggaacccattt-gtatttctttgtaagaactcattgatcgtggattggagagatcaatctctcctccagagtagg 29136388  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||   |||||||||||||| |||||||||||||||| ||| ||| ||||||||||       |||||||||||||||||||||||||||||||||| ||    
T  29136389 tcaagtttggaccgaactaggtgaacatttcttggtgctgtctat-ttttctctactctctttatcttgtttatcctttggttagattgtggttttgcta 29136487  T
Q  257 tgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||||||    
T  29136488 tgcacttggtttatagactaggtctattttgttgttattgcttgtggtt 29136536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 94 - 304
Target Start/End: Original strand, 28242382 - 28242594
Alignment:
Q  94 ttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  28242382 ttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggt 28242481  T
Q  194 gttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtgg-ttttgttatgcacttggtttatagactag-tctatattattgtt 291  Q
    |||||||||||||||||||       |||||||||||| ||| |||||||||||| ||||| ||| |||||||||| || | ||| |||| ||| |||||    
T  28242482 gttgttatcttttctctactctctttatcttgtttatcattttgttagattgtggtttttgctattcacttggtttctaaattagatctagattgttgtt 28242581  T
Q  292 gttgcttgtggtt 304  Q
    |||||||| ||||    
T  28242582 gttgcttgaggtt 28242594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 42298100 - 42297832
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  42298100 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtagg 42298002  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   |||||| |||       |||||||||||  ||||||| ||||||| |||||    
T  42298001 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctttac-tcttttatcttgtttattatttggttggattgtgattttg 42297903  T
Q  254 ttatgcacttggtttatagac-tagtctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
     |||||||||||||||||||| | || |||||||||||| |||||| ||| ||| |||||||||||||||||    
T  42297902 ctatgcacttggtttatagacttggtatatattattgttattgcttatgg-ttaatttggttgttggttgcc 42297832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 7482356 - 7482109
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  7482356 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtgaattggagagatcaatctctccttcagagtagg 7482257  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||||| |||||||||| |||| |||| ||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||    
T  7482256 tca-agttggaccgaactaggtgaacatttcatggtattgtcatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 7482158  T
Q  258 gcacttggtttatagactag---tctatattattgttgttgcttgtggtt 304  Q
    |||||| | |||||||||||   | |||||| ||||||||||||| ||||    
T  7482157 gcactt-gattatagactaggtctatatattgttgttgttgcttgaggtt 7482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 11348741 - 11348989
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11348741 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttctaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 11348839  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggttttgt 254  Q
    |||  |||||||||||||   ||||||||||||| |||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||||     
T  11348840 tca-agttggaccgaactgagtgaacatttcttgatgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 11348938  T
Q  255 tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  11348939 tatgcacttggtttatagactaggtctatattgttgttattgcttgtggtt 11348989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 37033198 - 37032948
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  37033198 gtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgtaagaactcattgatagtggattggagagattaatctcttctccatagtagg 37033099  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc--ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgt 254  Q
    |||| ||||||||||||| | ||||| || | || |||||||| ||  ||||||||||       ||||||||||||||||||||||| |||| |||||     
T  37033098 tcatggttggaccgaactgggtgaacaatctattcgtgttgttgtctattttctctactctctttatcttgtttatcctttggttagagtgtgattttgc 37032999  T
Q  255 tatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  37032998 tatgcacttgttttctagattagatctagattgttgttattgcttgtggtt 37032948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 93 - 306
Target Start/End: Complemental strand, 37876858 - 37876644
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 191  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||  |||  |||| |||||||| | |||||||||||||    
T  37876858 tttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctccagagtacatcaa-gttgaaccgaactgggtgaacatttcttg 37876760  T
Q  192 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagacta-gtctatattattgt 290  Q
    ||||||||||||||||| |||       |||||||||||| |||||||  |||||||||||  |||||||||||||||||||||| ||||||| | ||||    
T  37876759 gtgttgttatcttttctttactctctttatcttgtttatcatttggttgaattgtggtttttctatgcacttggtttatagactaggtctatagtgttgt 37876660  T
Q  291 tgttgcttgtggttta 306  Q
    | ||||||||||||||    
T  37876659 ttttgcttgtggttta 37876644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 260
Target Start/End: Original strand, 19754538 - 19754737
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||    
T  19754538 gtgagcttgttgaagctaatttcttgtaaccga-tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccctcagattagg 19754636  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||| | | | |||| || |||||| ||||||||||||| |||       |||||||||||||||| ||| ||||||||||||| |||    
T  19754637 tca-agttggaccgaagtgggtcaacaatttttggtg-tgttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctat 19754734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 204
Target Start/End: Original strand, 193657 - 193799
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  193657 agcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctcttctccagagtatgtca 193755  T
Q  161 ttgttggaccgaactagatgaacatttcttggtgtt-gttatctt 204  Q
      ||||||||||||| | |||||||||||||||||| ||||||||    
T  193756 -agttggaccgaactgggtgaacatttcttggtgttcgttatctt 193799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 8550912 - 8550787
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8550912 gtgagcttgtttaagctaatttcttgtaactcattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 8550814  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  8550813 tcaagtttggaccgaactgggtgaaca 8550787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 6808497 - 6808710
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |  ||||||||||    
T  6808497 gagcttgttgaagctaacttcttgtaactc-ttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctcagagtaggt 6808595  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatg 258  Q
     |||||||| ||||||||||| || ||||||||| |||||| | | || |||||       ||||||||||| |||| ||| ||| ||| ||||| | |     
T  6808596 tattgttggtccgaactagataaatatttcttggagttgttctttgttttctactctctttatcttgtttatgctttagtttgatagtgattttgcttta 6808695  T
Q  259 cacttggtttataga 273  Q
    |||||||||| ||||    
T  6808696 cacttggtttctaga 6808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 34603619 - 34603822
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  34603619 gtgagcttgtttaagctaatttcttgtaacccattttttatctctttgtaagaactcattgatggtggattgaagagatcaatctctcctccagagtagg 34603718  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||||||||||||||              ||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||    
T  34603719 tcaa-gttggaccgaactag--------------gtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 34603803  T
Q  258 gcacttggtttatagactag 277  Q
    |||||| | |||||||||||    
T  34603804 gcactt-gattatagactag 34603822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 22079359 - 22079501
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  22079359 gtgagcttgttaaagctaatttcttgtaacca-ttttgtatctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtag 22079457  T
Q  157 gtcattgttggaccgaactagatgaacatttc-ttggtgttgtt 199  Q
    ||||||| |||||| |||| | | |||||||| |||||||||||    
T  22079458 gtcattgctggaccaaacttggtaaacatttctttggtgttgtt 22079501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 3189373 - 3189498
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3189373 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3189471  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  3189472 tcaagtttggaccgaactgggtgaaca 3189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 3198190 - 3198315
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3198190 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3198288  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  3198289 tcaagtttggaccgaactgggtgaaca 3198315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 3207029 - 3207154
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3207029 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3207127  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  3207128 tcaagtttggaccgaactgggtgaaca 3207154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 46064961 - 46065062
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  46064961 gtgagctcgttgaagctaatttcttgtaactcatgt-gtatctctttgtaagaactcattcatagtggattggagagatcaatctctcccccagagtagg 46065059  T
Q  158 tca 160  Q
    |||    
T  46065060 tca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 28220351 - 28220236
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  28220351 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 28220253  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  28220252 tca-agttggaccgaact 28220236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 28265679 - 28265564
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  28265679 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattagg 28265581  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  28265580 tca-agttggaccgaact 28265564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 194750 - 194830
Alignment:
Q  245 gtggttttgttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  194750 gtggttttgatatgcacttggtttatagactaggtctatattattgttgttgcttgtggtttactttggttgttggttgcc 194830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 49918393 - 49918510
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  49918393 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 49918491  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  49918492 tca-agttggaccgaactag 49918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 834292 - 834177
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  834292 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagagtagg 834194  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  834193 tca-agttggaccgaact 834177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 3156908 - 3157023
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  3156908 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagg 3157006  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  3157007 tca-agttggaccgaact 3157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 15820350 - 15820485
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||| |||||| |||| |||||| |||||||| |||||||||||    
T  15820350 gtgagcttgttgaagctaatttcttgtaac-acatttgtatctctttttaagaactcattgatagtgcattgaagagataaatctctcatccagagtagg 15820448  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  |||||| |||||||| | ||||||| |||||||    
T  15820449 tca-agttggatcgaactaggtaaacatttattggtgt 15820485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 264
Target Start/End: Original strand, 19752731 - 19752930
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| | ||||||    
T  19752731 gagcttgttgaagctaatttcttgtaaccga-tttgtatctctttgtaagaactcattgatagaggattggagagatcaatctctctcccatattaggtc 19752829  T
Q  160 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgc 259  Q
    |  ||||||||||||||| | |||| |  || |   ||||||||||| | |||       |||||||||||||||| ||| ||||||||||||  |||||    
T  19752830 a-agttggaccgaactaggtcaacaatcttttg---tgttatcttttatttactctctttatcttgtttatccttttgttggattgtggttttactatgc 19752925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 31659281 - 31659396
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||| ||||    
T  31659281 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctccctcagattagg 31659379  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  31659380 tca-agttggaccgaact 31659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 28223541 - 28223431
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||      
T  28223541 cttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-a 28223444  T
Q  163 gttggaccgaact 175  Q
    |||||||||||||    
T  28223443 gttggaccgaact 28223431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 20762727 - 20762833
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||   ||||||    
T  20762727 aagctaatttcttgtaaccc-ttttgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggac 20762825  T
Q  170 cgaactag 177  Q
    ||||||||    
T  20762826 cgaactag 20762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 13316465 - 13316352
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  13316465 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 13316367  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  13316366 cgaactgggtgaaca 13316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 13659458 - 13659346
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  13659458 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 13659360  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  13659359 -agttggaccgaact 13659346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 44455203 - 44455304
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  44455203 gtgaacttgttgaaactaatttcttgtaactcattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 44455301  T
Q  158 tca 160  Q
    |||    
T  44455302 tca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 1833574 - 1833666
Alignment:
Q  68 ttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  1833574 ttgaagctaaattcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 4552762 - 4552647
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  4552762 gtgagcttgttgaagctaatttcttgtaac-ccctttgtatccctttgtaagaactcattgataatggattggagagatcaatctctccctcagagtagg 4552664  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  4552663 tca-agttggaccgaact 4552647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 45644479 - 45644364
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  |||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  45644479 gtgagcttgtcaaagctaatttcttgcaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatatctcccccagattagg 45644381  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  45644380 tca-agttggaccgaact 45644364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 5459956 - 5460081
Alignment:
Q  66 tgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||| ||||| ||||||||||||||||||||| || ||||||| ||||||    
T  5459956 tgttgaagctaatttcttgtaac--attttatatttctttgtaaagaactcattgatagtagattggagagatcaatctctcatctagagtagatcattg 5460053  T
Q  164 ttggaccgaactagatgaacatttcttg 191  Q
    |||| | ||||||| | |||||||||||    
T  5460054 ttgggctgaactaggtaaacatttcttg 5460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 16455664 - 16455750
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc 145  Q
    ||||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  16455664 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctgtgtaagaactcattgatagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 50167300 - 50167183
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  ||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||     
T  50167300 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagc 50167202  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  50167201 tca-agttggaccgaactag 50167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 51765450 - 51765565
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||   |||||    
T  51765450 aagctaatttcttgtaaccccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttgga 51765549  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  51765550 ccgaactgggtgaaca 51765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 37503679 - 37503565
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||     ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |    
T  37503679 gtgaacttgttgaagctaatttcttgtaacc----ttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattatg 37503584  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||| ||||||||    
T  37503583 tca-agttggatcgaactag 37503565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 50169335 - 50169211
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||| ||||    
T  50169335 gtgagcttgtcaaagctaatttcttgtaactcattt-gtatctctttgtaagtactcattgatagtggattgaagagatcaatctctcccctagattagg 50169237  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||  ||||||||||||| ||| ||||    
T  50169236 tca-agttggaccgaactggatcaaca 50169211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 13138101 - 13137986
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||| ||||||||||| ||||| |||||||||| | ||||||||    
T  13138101 gtgagcttgttgaagctaatttcttgtaaccca-tttgcatctctttgtaagaacacattgatagtggattgaagagagcaatctctcccctagagtagg 13138003  T
Q  158 tcattgttggaccgaact 175  Q
    ||| | ||||||||||||    
T  13138002 tca-tattggaccgaact 13137986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 23555390 - 23555257
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||||    
T  23555390 gtgaacttgttgaaactaatttcttataactcattt-gtatctctttgtaagaactcattgatagtggattggagagttcaatctctcc-ccatagtagg 23555293  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtg 194  Q
    |||  |||||| ||||||   | ||||||||||||||    
T  23555292 tca-agttggatcgaactgagtaaacatttcttggtg 23555257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 41360957 - 41361074
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || ||||||||||  |||||||||| ||||| ||| ||||||    
T  41360957 gtgagcttgttgaaactaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtagg 41361055  T
Q  158 tcattgttggaccgaactag 177  Q
    ||| | ||||||||||||||    
T  41361056 tca-tattggaccgaactag 41361074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 37282817 - 37282682
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtag 156  Q
    |||||||||||||||||||||| | |||||   ||||| |||||||||||| |||||||||| ||||||||||||||||| ||||||||||   ||||||    
T  37282817 gtgagcttgttgaagctaatttatggtaaccc-ttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcctttggagtag 37282719  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtg 194  Q
    |||| | |||||| ||||||||| ||||||| ||||||    
T  37282718 gtcaat-ttggactgaactagataaacattttttggtg 37282682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 197033 - 196908
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct-cctccagagtag 156  Q
    ||||||||||| ||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||  |||||| || ||||| |||    
T  197033 gtgagcttgtttaagttaatttcttgtaactca-tttgtatccctttgtaagaactcattgatagtggattggagagatttatctctccccccagattag 196935  T
Q  157 gtcattgttggaccgaactagatgaaca 184  Q
    ||||  ||||||||||||| ||| ||||    
T  196934 gtca-agttggaccgaactggatcaaca 196908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 40122323 - 40122204
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt---atagtggattggagagatcaatctctcctccagagta 155  Q
    ||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||| ||   |||||||||| ||||||||||||||||| ||| | ||    
T  40122323 gtgagcttgtttaagctaatttcttataactcattt-gtatcactttgtaagaactctttgatatagtggattagagagatcaatctctcccccatatta 40122225  T
Q  156 ggtcattgttggaccgaactag 177  Q
    |||||  |||||||||||||||    
T  40122224 ggtca-agttggaccgaactag 40122204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 2926613 - 2926706
Alignment:
Q  120 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctac 212  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| | |||| ||| ||||||||||| | ||| ||||||    
T  2926613 tagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggtaaacaattctttggtgttgttctttttactctac 2926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 10925266 - 10925356
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaac---tcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    ||||| ||||||||||||||| ||||||||||||    
T  10925266 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctcc 10925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 37559994 - 37559877
Alignment:
Q  59 gtgagcttgttgaa-gctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctcc-agagta 155  Q
    |||| ||||||||| ||||||||||||||||  |||| |||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||| ||    
T  37559994 gtgaacttgttgaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtgaattggagagatcaatctctccccctagatta 37559896  T
Q  156 ggtcattgttggaccgaact 175  Q
    |||||  |||||||||||||    
T  37559895 ggtca-agttggaccgaact 37559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 928101 - 927966
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||   ||||| |||||||||||| |||||||| |||||||||| |||||| ||| |||| | |||  |||||    
T  928101 gtgagcttgttgaagctaatttcttgtaac-ccttttggatctctttgtaaaaactcattaatagtggattagagagaccaacctcttccccaaggtagg 928003  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||| ||||||||| | | |||||||||| ||||    
T  928002 tca-agttagaccgaactgggtaaacatttctttgtgt 927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 2263101 - 2262965
Alignment:
Q  58 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 155  Q
    |||||||||||||||| ||||||||||||||   |||| ||||| ||||||| ||||| ||| ||||||||||| |||||||||||| |||   || |||    
T  2263101 ggtgagcttgttgaagataatttcttgtaaccc-ttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttcccttagggta 2263003  T
Q  156 ggtcattgttggaccgaactagatgaacatttcttggt 193  Q
    |||||||||||| |||||||   | |||||||||||||    
T  2263002 ggtcattgttggtccgaactgagtaaacatttcttggt 2262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 3847246 - 3847131
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| ||||| ||||||| || |||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||| | ||||| ||||    
T  3847246 gtgagtttgtttaagctaaatttttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatccatctcttccccagattagg 3847148  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  3847147 tca-agttggaccgaact 3847131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 12318646 - 12318468
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctt-tgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||||||||||||||||||||||| | |||||||| |||| | |||||||||||| ||| || |   ||||||||  ||||||| ||| ||||| |    
T  12318646 gagcttgttgaagctaatttcttgtaacca-ttttgtatgtcttctttaagaactcattgatactgaagcagagagatc--tctctcccccatagtagtt 12318550  T
Q  159 cattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggtt 239  Q
    |||| |||||||||||||| | ||| |||| ||||||||||| |||||||| |||       ||||||||||| ||||||||    
T  12318549 cattattggaccgaactaggtaaacaattttttggtgttgttctcttttctttactccctttatcttgtttattctttggtt 12318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 40282435 - 40282545
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  40282435 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 40282532  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  40282533 aactgggtgaaca 40282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 13938195 - 13938288
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttgg 167  Q
    ||||||||||||||   ||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  13938195 taatttcttgtaaccttttttgtatctctttgtaagaaactcattgatagtggattggagagatc--tctctcccccagatgtaggtcattgttgg 13938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 9987287 - 9987369
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  9987287 tttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9987369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 20622319 - 20622237
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  20622319 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 20622237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 30476566 - 30476486
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 144  Q
    |||||||||| |||||| |||||||  |||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  30476566 cttgttgaagataatttattgtaacccattt-gtatctctttgtaagaactcattgatactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 9036471 - 9036584
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||| ||||  |||||||||||| |||||||||||   |||||    
T  9036471 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtttgga 9036568  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  9036569 ccgaactgggtgaaca 9036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 250
Target Start/End: Complemental strand, 9109540 - 9109352
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 161  Q
    |||||||||| ||||||||||||||   |||||||||||||||||| |||| | || |||||| ||||||||||||||||||| |   |||||| |||||    
T  9109540 cttgttgaagttaatttcttgtaaccc-ttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcat 9109442  T
Q  162 tgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatc-ttgtttatcctttggttagattgtggtt 250  Q
     |||| ||| |||||| | ||||||| |||| | |||||| |  |||||||       ||| |||||||| |||||||| ||||||||||    
T  9109441 cgttgaaccaaactaggtaaacattttttggggctgttatttagtctctactctctttatctttgtttattctttggtttgattgtggtt 9109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 44203722 - 44203800
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  44203722 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 44203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 36683766 - 36683824
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||    
T  36683766 tttgtaagaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7482579 - 7482534
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  7482579 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 7482534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 19754310 - 19754355
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  19754310 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 19754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 21054044 - 21054117
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  21054044 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 21054117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37168116 - 37168161
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37168116 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 37168161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 37879260 - 37879215
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37879260 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 37879215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28242207 - 28242252
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  28242207 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 28242252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 37033422 - 37033377
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  37033422 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 37033377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 42298324 - 42298279
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  42298324 tgggaaacacatgagtggagagtcatttgcgagcaacttgggtgag 42298279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 47114990 - 47115035
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  47114990 tgggaaacacatgaatggagagtcttttgtgagcaacttgggtgag 47115035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 13547434 - 13547394
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtga 62  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  13547434 aaacacatgagtggagagtcttttgtgagcaacttgggtga 13547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 13549345 - 13549305
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtga 62  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  13549345 aaacacatgagtggagagtcttttgtgagcaacttgggtga 13549305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 3460739 - 3460821
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaat 140  Q
    |||||||||||||||||||||| |||||||   |||||||| ||||||| ||||||  ||| ||||| ||||||||||||||||    
T  3460739 gtgagcttgttgaagctaatttattgtaac-ccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaat 3460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 8871127 - 8871089
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  8871127 atagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 11348521 - 11348562
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  11348521 aaacacatgagtggagagtcatttgtgagcaacttgggtgag 11348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31926055 - 31926010
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  31926055 tgggaaacacgtgagtggagaatcttttgtgagcaacttgggtgag 31926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 88
Target Start/End: Complemental strand, 37879036 - 37879007
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaac 88  Q
    ||||||||||||||||||||||||||||||    
T  37879036 gtgagcttgttgaagctaatttcttgtaac 37879007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 44650288 - 44650153
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||| ||||| | |||||||| |||||| |  |||| |||||||||||||  || |||||| |||||||||| |||||||||||||| | | | |||||    
T  44650288 gtgagtttgttaacgctaatttattgtaaatc-ttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtag 44650190  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtg 194  Q
    |||| | |||||||||||||| | || |||| ||||||    
T  44650189 gtcaat-ttggaccgaactaggtaaatattttttggtg 44650153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 1050567 - 1050520
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  1050567 gagcttattgaagctaatttcttgtaac-atttttgtgtctctttgtaa 1050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 25652135 - 25652178
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||||||||||||||||||||||  | ||||||||||||||||    
T  25652135 ttgttgaagctaatttcttgtaact-ctcttgtatctctttgtaa 25652178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 8e-92; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 379423 - 379669
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  379423 gtgagcttgttgaagctaatttcttgtaacccattt-gtatcgctttgtaagaactaattgatagtggattggagagatcaatctctcctccagagtagg 379521  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||||||    
T  379522 tcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgttat 379621  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  379622 gcacttggtttatagactaggtctatattgttgttgttgtttgtggtt 379669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 59 - 306
Target Start/End: Original strand, 12073435 - 12073683
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12073435 gtgagcttgttgaagctaatttattgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcttccagagtagg 12073533  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||       ||||||||||| ||||||||||||||||||||||||||    
T  12073534 tcattgttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttagattgtggttttgttat 12073633  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtggttta 306  Q
    ||||||||||| |||| ||| |||| ||| ||||||||||||||||||||    
T  12073634 gcacttggtttctagattagatctagattgttgttgttgcttgtggttta 12073683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 60 - 324
Target Start/End: Original strand, 35662485 - 35662749
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  35662485 tgagtttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatatctcctcaagagtaggt 35662583  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatg 258  Q
    ||  |||||||||||||  |||||||||| |||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| ||||    
T  35662584 caa-gttggaccgaactgaatgaacattttttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatg 35662682  T
Q  259 cacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  35662683 cacttggtttatagactatgtctatattgttgttgttgcttatggttaattttggttgttggttgcc 35662749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 46703543 - 46703738
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46703543 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcatttatagtggattggagagatcaatctctcctccagagtagg 46703642  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||| |||       |||||||||||| |||||||||||||||||||||    
T  46703643 tcattgttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcatttggttagattgtggttttg 46703738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 41964458 - 41964702
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| |||||||||| |||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41964458 gtgagcttgtttaagctaatttattgtaacccattttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 41964557  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | ||| |||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||| |||    
T  41964558 tca-agttggaccgaactgggtgagcatttcttggtgttgttatcttttctttac--tctctatcttgtttatcctttggttagattgtggttttgctat 41964654  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    ||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  41964655 gcacttgttttctagattagatctagattgttgttattgcttgtggtt 41964702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 59 - 303
Target Start/End: Complemental strand, 50673972 - 50673728
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50673972 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 50673874  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||||| |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || ||||||||||||| ||    
T  50673873 tcaa-gttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattgtggttttgcta 50673775  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggt 303  Q
    ||||||| | ||||||||||| |||||||| ||||| |||||| ||||    
T  50673774 tgcactt-gattatagactagatctatattgttgttattgcttatggt 50673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 2209756 - 2210007
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2209756 gtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtagg 2209855  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       |||||||||||| |||||||||||||||||||||    
T  2209856 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttg 2209955  T
Q  254 ttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
     |||||||||| ||| |||| ||| |||| ||| ||||| ||| ||||||||    
T  2209956 ctatgcacttgttttctagattagatctagattgttgttattgtttgtggtt 2210007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 306
Target Start/End: Original strand, 40632488 - 40632735
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |    
T  40632488 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctaaagtaag 40632586  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | | |||||||||||||||||||||||||| | |||       ||||||||||||||||||||  ||||||||||||  ||    
T  40632587 tcaa-gttggaccgaactgggtaaacatttcttggtgttgttatcttttttttactctctttatcttgtttatcctttggttgaattgtggttttgccat 40632685  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttta 306  Q
    ||||||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  40632686 gcacttggtatatagactaggtctatattgttgttattgcttgtggttta 40632735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 61 - 304
Target Start/End: Original strand, 8665453 - 8665693
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8665453 gagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtc 8665551  T
Q  160 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgc 259  Q
    |  |||||||| |||||| || ||||||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||||    
T  8665552 a-agttggaccaaactaggtgtacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgc 8665650  T
Q  260 acttggtttatagactagtctatattattgttgttgcttgtggtt 304  Q
    | || | ||||||| ||| ||||||| ||||||||||||||||||    
T  8665651 a-tttgattataga-tagactatattgttgttgttgcttgtggtt 8665693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 59 - 264
Target Start/End: Original strand, 6655999 - 6656203
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  6655999 gtgaacttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 6656097  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||| | | |||||||||||||||||||||||||||||| |||       |||||||||||||||| ||| ||||||||||||| |||    
T  6656098 tca-agttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctat 6656196  T
Q  258 gcacttg 264  Q
    |||||||    
T  6656197 gcacttg 6656203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 59 - 324
Target Start/End: Original strand, 41639469 - 41639737
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||| |||||||||||||||||||||  |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41639469 gtgaactttttgaagctaatttcttgtaacccattt-gtatctatttgtaagaactcatcgatagtggattggagagatcaatctctcctccagagtagg 41639567  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||||||||||||   |||||||||||||||||||||||| ||||| |||       ||||||||||||||||||||  |||||||||||| |||    
T  41639568 tca-agttggaccgaactgagtgaacatttcttggtgttgttatcgtttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 41639666  T
Q  258 gcacttggtttatagacta-gtctatat---tattgttgttgcttgtggtttac-tttggttgttggttgcc 324  Q
    |||||| | |||||||||| ||||||||     ||||||||||||||||||||| ||||||| |||||||||    
T  41639667 gcactt-gattatagactaggtctatatatcatttgttgttgcttgtggtttacatttggttattggttgcc 41639737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 8648182 - 8648432
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| ||||||||||||||||||| ||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8648182 gtgagtttgttgaagctaatttcttataacccattt-gtatctctttgtaagaactcattgatattggattggagagatcaatctctcctccagagtagg 8648280  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||||||| |||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||    
T  8648281 tca-agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 8648379  T
Q  258 gcacttggtt---tatagactag---tctatattattgttgttgcttgtggtt 304  Q
    ||| ||| ||    |||||||||   | |||||| ||||||||||||||||||    
T  8648380 gcatttgattatagatagactaggtctatatattgttgttgttgcttgtggtt 8648432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 26699568 - 26699302
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||    
T  26699568 gtgagcttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtag 26699470  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    ||||||||||||||||||| | | || ||||||| |||  |||||||||||| |||       ||||||||||| ||||||||  ||| |||||||| ||    
T  26699469 gtcattgttggaccgaactgggtaaaaatttcttagtgccgttatcttttctttactctctttatcttgtttattctttggttcaattatggttttgcta 26699370  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    ||||||||| || |||| ||| |||| ||| |||| ||  ||||||| ||| ||||||| |||||||||    
T  26699369 tgcacttggattctagattagatctagattgttgtcgtgtcttgtgg-ttaatttggttattggttgcc 26699302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 65 - 324
Target Start/End: Original strand, 33989893 - 33990153
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  33989893 ttgttgaagctaatttcttgtaa-tccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcatt 33989991  T
Q  163 gttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcact 262  Q
     |||||  ||||| | | |||||||||||||||| |||| |||| |||||       ||||||||||| ||||||||  ||| ||| |||| ||||||||    
T  33989992 cttggattgaactgggtaaacatttcttggtgttattatattttttctactctctttatcttgtttattctttggttcaattctggatttgctatgcact 33990091  T
Q  263 tggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||| |||| ||| |||| ||| |||||||||||||| ||||| ||||||| ||| |||||    
T  33990092 tggtttctagattagatctagattgttgttgttgcttgt-gtttattttggttattgattgcc 33990153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 50262826 - 50262575
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||    
T  50262826 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagttgattggagatatcaatctttcctccagagtagg 50262728  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||||||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       ||||||||||| | ||  || |||||||||||||    
T  50262727 tcattgttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctttttatcttgtttattccttacttggattgtggttttg 50262628  T
Q  254 ttatgcacttggtttatagactag---tctatattattgttgttgcttgtggtt 304  Q
      |||||||| | ||| | |||||   | |||||| ||||||||||||||||||    
T  50262627 ccatgcactt-gattacatactaggtctatatattgttgttgttgcttgtggtt 50262575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 54883063 - 54883278
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || |    
T  54883063 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagggatcaatctctcctccagattaag 54883161  T
Q  158 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatctttt-ctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtt 255  Q
    |||  ||||||||||||| | | |||| |||||||||||||||||||||| || |||       ||||| ||||| ||||||||  |||||||||||| |    
T  54883162 tcaa-gttggaccgaactgggtcaacaatttcttggtgttgttatctttttctttactctctttatcttatttattctttggttgaattgtggttttgct 54883260  T
Q  256 atgcacttggtttataga 273  Q
     |||| ||||||||||||    
T  54883261 ctgcatttggtttataga 54883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 12119582 - 12119801
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    |||| ||| |||||||||||||||||||||   |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||    
T  12119582 gtgaactttttgaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcc-caagagtag 12119679  T
Q  157 gtcattgttggaccgaactagatgaac-atttcttggtgttgt----tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttt 251  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    ||| ||||||||||       ||||||||||  |||||||  |||||||||||    
T  12119680 gtcattgttggaccgaactaggtgaacaatttcttggtgttgtcatctattttttctctactctctttatcttgtttagtctttggtccgattgtggttt 12119779  T
Q  252 tgttatgcacttggtttataga 273  Q
    || ||||||||| |||| ||||    
T  12119780 tgctatgcacttagtttctaga 12119801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 300
Target Start/End: Original strand, 26364279 - 26364522
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatta-tagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  26364279 gtgaacttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattaatagtggattggagagatcaatctctcccccagattagg 26364377  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||  ||| ||| ||||| | | ||| ||||||||||||||||||||||||| |||       ||||||||||| | ||| || ||||||||||||| ||    
T  26364378 tca-agtttgactgaactgggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgcttggattgtggttttgcta 26364476  T
Q  257 tgcacttggtttatagactag---tctatattattgttgttgcttgt 300  Q
    | |||||   |||||||||||   | |||||| ||||||||||||||    
T  26364477 tacactt-aattatagactaggtctatatattgttgttgttgcttgt 26364522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 264
Target Start/End: Complemental strand, 27417090 - 27416886
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  27417090 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagg 27416992  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||||||||||||   | |||| |  |||||||||||||||| ||| |||       ||||||||||| |||||||| |||||||||||||  ||    
T  27416991 tca-agttggaccgaactgagtcaacaatctttggtgttgttatcttgtctttactctctttatcttgtttattctttggttggattgtggttttgccat 27416893  T
Q  258 gcacttg 264  Q
    |||||||    
T  27416892 gcacttg 27416886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 56178762 - 56178637
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  56178762 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 56178664  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  56178663 tcaagtttggaccgaactgggtgaaca 56178637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 253
Target Start/End: Original strand, 33089923 - 33090117
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||||||||||||||| || |||| | |||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  33089923 gagcttgttgaagctaatttattataacca-ttttgtatctctctgtaaagaactcattgatagtggattagagagatcaatctctcctctagagtaggt 33090021  T
Q  159 cattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
     |||||||||||| ||||||| |||| ||| |||  |||||| |||||||||| |       |||||||||||  ||||||| |||||||||||||    
T  33090022 tattgttggaccggactagataaacaattctttgaagttgttctcttttctctgctctctttatcttgtttattttttggttcgattgtggttttg 33090117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 48893763 - 48893648
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  48893763 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattagg 48893665  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  48893664 tca-agttggaccgaact 48893648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 9927583 - 9927468
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  9927583 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 9927485  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  9927484 tca-agttggaccgaact 9927468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 26175761 - 26175646
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  26175761 gtgagcttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 26175663  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  26175662 tca-agttggaccgaact 26175646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 31474195 - 31474329
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||| |    
T  31474195 tgagtttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagttgattggagagataaatctctccaccagagtagat 31474293  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgt 195  Q
    ||  ||||||||||||| | | ||||| |||||||||    
T  31474294 ca-agttggaccgaactgggtaaacatatcttggtgt 31474329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 37229847 - 37229714
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| |||| ||||| |||||||   |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||    
T  37229847 gtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaagaactcatttatagtggattggagagatcaatctctccctcatagtagg 37229748  T
Q  158 tcattgttggaccgaactagatgaacatttcttgg 192  Q
    |||  ||||||||||||||| | ||||||||||||    
T  37229747 tca-agttggaccgaactaggtaaacatttcttgg 37229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 48143086 - 48143187
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||   |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48143086 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatctcttcataagaactcattgatagtggattggagagatcaatctctcctccagagtagg 48143184  T
Q  158 tca 160  Q
    |||    
T  48143185 tca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 5429722 - 5429837
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  5429722 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctatttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 5429820  T
Q  158 tcattgttggaccgaact 175  Q
    | |  |||||||||||||    
T  5429821 tta-agttggaccgaact 5429837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 6542304 - 6542169
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||| |    |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| |||||    
T  6542304 gtgagcttgttgaaactaatttcttgttagcc-ttttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagggtagg 6542206  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||||||||||||| | | |||||||||||||||    
T  6542205 tca-agttggaccgaactgggtaaacatttcttggtgt 6542169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 29999920 - 29999804
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    |||||||||||||||||||  |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||    
T  29999920 aagctaatttcttgtaactc-ttttgtatcttttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgga 29999822  T
Q  169 ccgaactagatgaacatt 186  Q
    ||||||| | ||||||||    
T  29999821 ccgaactgggtgaacatt 29999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 36463514 - 36463399
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||    
T  36463514 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgacagtggattggagagatcaatctctcccccagattagg 36463416  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  36463415 tca-agttggaccgaact 36463399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 37740668 - 37740783
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  37740668 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttgg 37740766  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  37740767 tca-agttggaccgaact 37740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 46147516 - 46147401
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||| | ||||    
T  46147516 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactctttgatagtggattggagacatcaatctctcccccaaattagg 46147418  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  46147417 tca-agttggaccgaact 46147401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 13992402 - 13992293
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 172  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||    
T  13992402 ctaatttcttgtaactc-ttttgtatctctt-gtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 13992305  T
Q  173 actagatgaaca 184  Q
    ||||| ||||||    
T  13992304 actaggtgaaca 13992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 47038535 - 47038421
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||  |  ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |    
T  47038535 gtgagcttgttgaagctaatttcttgtaatca--tttgtatctgtttgtaaggactcattgatagtggattggagagatcaatctctcccccagagtaag 47038438  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  47038437 tca-agttggaccgaact 47038421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 5370196 - 5370092
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||   ||||||    
T  5370196 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggac 5370098  T
Q  170 cgaact 175  Q
    ||||||    
T  5370097 cgaact 5370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 36994567 - 36994682
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||     
T  36994567 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaga 36994665  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  36994666 tca-agttggaccgaact 36994682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 31495428 - 31495316
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||   ||||||||    
T  31495428 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccg 31495329  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  31495328 aactgggtgaaca 31495316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 34570539 - 34570440
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  | || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  34570539 gtgaacttgttgaagctaatttcttgtaacccaatt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 34570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 195
Target Start/End: Original strand, 4588005 - 4588137
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| | ||||| |    
T  4588005 agcttgttgaagctaatttcttgtaac-ccttttgtatctctttgtaagaactcattgatagtggattggagagaacaatctctcccccataataggtga 4588103  T
Q  161 ttgttggaccgaactagatgaacatttcttggtgt 195  Q
      |||||||| |||| | | |||||||| ||||||    
T  4588104 -agttggaccaaactgggtaaacatttcatggtgt 4588137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 22882870 - 22882740
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    ||||||||||||||||||||||||   ||||||||||||| |||| |||||||||  ||||||||| |||| ||||||||| ||  | ||||||||||||    
T  22882870 ttgttgaagctaatttcttgtaaccc-ttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcatt 22882774  T
Q  163 gttggaccgaactagatgaacatttcttggtgtt 196  Q
    ||||||||||||| ||| ||||||||||||||||    
T  22882773 gttggaccgaactggataaacatttcttggtgtt 22882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 22934534 - 22934404
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    ||||||||||||||||||||||||   ||||||||||||| |||| |||||||||  ||||||||| |||| ||||||||| ||  | ||||||||||||    
T  22934534 ttgttgaagctaatttcttgtaaccc-ttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcatt 22934438  T
Q  163 gttggaccgaactagatgaacatttcttggtgtt 196  Q
    ||||||||||||| ||| ||||||||||||||||    
T  22934437 gttggaccgaactggataaacatttcttggtgtt 22934404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 12744038 - 12743935
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  12744038 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggac 12743941  T
Q  170 cgaact 175  Q
    ||||||    
T  12743940 cgaact 12743935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 12745427 - 12745324
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  12745427 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggac 12745330  T
Q  170 cgaact 175  Q
    ||||||    
T  12745329 cgaact 12745324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 52095475 - 52095352
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||   ||||||    
T  52095475 aagctaatttcttgtaacccattt-gtatctctttgtaagaaatctttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggac 52095378  T
Q  170 cgaactagatgaacatttcttggtgt 195  Q
    |||||| | |||||| || |||||||    
T  52095377 cgaactgggtgaacaatttttggtgt 52095352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 24969155 - 24969238
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatct 142  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  24969155 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 54200031 - 54199930
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||||| ||||| ||||    
T  54200031 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtgaattagagagatcattctctcccccagattagg 54199933  T
Q  158 tca 160  Q
    |||    
T  54199932 tca 54199930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 12739663 - 12739560
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| |||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||  |||||||    
T  12739663 aagctaatttcttgtaacccattt-gtatctatttgtatgaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggac 12739566  T
Q  170 cgaact 175  Q
    ||||||    
T  12739565 cgaact 12739560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 45687307 - 45687192
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  ||||||||||||| ||||| |||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| | || |    
T  45687307 gtgagcttgtcaaagctaatttcttataactcattt-gtatctatttgtaagaactcattgatagtggattggagagatctatctctcctccatattatg 45687209  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  45687208 tca-agttggaccgaact 45687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 3913491 - 3913578
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||| ||||||||||||||||||| ||||  |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3913491 gtgagtttgttgaagctaatttcttttaacccattt-gtatatctttgtaagaactcattgatagtggattggagagatcaatctctcc 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 21688292 - 21688534
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| ||||||| |||||||| |||| ||||||||| | ||||||||||| ||| || |||||||||||||||| |||| | ||| ||||    
T  21688292 gtgagcttgttgaaactaattttttgtaactcattt-gtatctcttcggaagaactcattgataatgaattggagagatcaatccctcccctagattagg 21688390  T
Q  158 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggtta-gattgtggttttgtt 255  Q
    |||  ||| ||||||| |   | |||| |||||||||||||||||||| | ||          |||||  ||   ||||| ||| |||||||||||||||    
T  21688391 tcaa-gttagaccgaattgagtcaacaatttcttggtgttgttatcttctttc---attgcttatctttattg--ctttgattatgattgtggttttgtt 21688484  T
Q  256 atgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  21688485 atgcatttgatttatagactagatctatattattgttgttgcttgtggtt 21688534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 8393448 - 8393562
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  8393448 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 8393545  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  8393546 accgaactgggtgaaca 8393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 8395657 - 8395771
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  8395657 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 8395754  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  8395755 accgaactgggtgaaca 8395771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 12744160 - 12744087
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 144  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12744160 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 52467479 - 52467364
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||| |||||||||  |||| ||||| |||||||| ||||  || |||||||||||||||||||||||||||| | ||| ||||    
T  52467479 gtgagcttgttgaagctaatatcttgtaacccattt-gtatcactttgtaataactttttgatagtggattggagagatcaatctctccccgagattagg 52467381  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  52467380 tca-agttggaccgaact 52467364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 29254538 - 29254652
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||||||||| |||||||||| |||  |||| || ||||||||||||||||| || |||||||||||||||||||||||||||  ||| | |||||    
T  29254538 tgagcttgttgaagttaatttcttgcaacccattt-gtgtctctttgtaagaactcgttgatagtggattggagagatcaatctctctcccaaattaggt 29254636  T
Q  159 cattgttggaccgaact 175  Q
    ||  |||||||||||||    
T  29254637 ca-agttggaccgaact 29254652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 12745546 - 12745476
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 144  Q
    |||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12745546 ctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 5871863 - 5871964
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| |||| |||||||||||||  ||||| |||| ||||| |||||||| || |||||||||| ||||||||||||||||| ||||| ||||    
T  5871863 gtgagcttgtttaagcaaatttcttgtaacccatttt-tatcactttgcaagaactctttgatagtggattagagagatcaatctctcccccagattagg 5871961  T
Q  158 tca 160  Q
    |||    
T  5871962 tca 5871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 12747869 - 12747794
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||  |||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  12747869 aagctaatttcttgtaacccattt-gtatctatttgtatgaactcattgatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 13009536 - 13009468
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| | |||||||    
T  13009536 tttgtatccctttgtaagaactcattgatagtggattggagagatcgatctctcctccaaattaggtca 13009468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 21703958 - 21703829
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    |||||||||||| | |||||||||| |   |||||||||| ||||||| ||||||||| | ||||||||||||| |||||||| ||| ||| ||||||||    
T  21703958 agcttgttgaagatgatttcttgtaccct-ttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatcc-ccatagtaggtc 21703861  T
Q  160 attgttggaccgaactagatgaacatttcttg 191  Q
    |||||| ||||||||| | | |||||||||||    
T  21703860 attgtttgaccgaactgggtaaacatttcttg 21703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 34112862 - 34112973
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||| ||||||||||| |||||| | ||||||||||  ||||||| | | |||||||    
T  34112862 gagcttgttgaagctaatttcatgtaac-ccttttgcatctctttgtaaagaactcattgatagtgaagtggagagatc--tctctcccctatagtaggt 34112958  T
Q  159 cattgttggaccgaa 173  Q
    |||||||||||||||    
T  34112959 cattgttggaccgaa 34112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 322
Target Start/End: Complemental strand, 55085439 - 55085304
Alignment:
Q  187 tcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatatt 285  Q
    |||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||||||||||||| || | ||| |||| |||    
T  55085439 tcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatctagatt 55085340  T
Q  286 attgttgttgcttgtggtttactttggttgttggttg 322  Q
     ||||| |||||||| | ||| |||| ||||||||||    
T  55085339 gttgttattgcttgtag-ttaatttgattgttggttg 55085304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 5207967 - 5207866
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||||||||||| ||| |||   || | ||||| |||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  5207967 gtgaacttgttgaagctaatttattgcaaccc-ttgtatatctatttgtaagaactcattgatagtggattggaaagatcaatctctctcccagagtagg 5207869  T
Q  158 tca 160  Q
    |||    
T  5207868 tca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 304
Target Start/End: Original strand, 46703752 - 46703838
Alignment:
Q  220 atcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag---tctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||   | |||||| ||||||||||||| ||||    
T  46703752 atcttgtttatcctttggttagattgtggttttgctatgcacttgatt-atagaataggtctatatattgttgttgttgcttgaggtt 46703838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 51337139 - 51337242
Alignment:
Q  92 ttttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttctt 190  Q
    |||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||  || | |||||||  ||||||||||||| | | |||||||| |    
T  51337139 ttttgtatctctttttaagaactcattgatagtgtattagagagatcaatctctcccacacattaggtca-agttggaccgaactgggtaaacatttcgt 51337237  T
Q  191 ggtgt 195  Q
    |||||    
T  51337238 ggtgt 51337242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 38811235 - 38811162
Alignment:
Q  140 tctctcctccagagtaggtcattgttggaccgaactagatgaacatttctt-ggtgttgttatcttttctctac 212  Q
    ||||||| | |||||||||||||||||||||||||| | | |||| ||||| ||||||||| ||||||||||||    
T  38811235 tctctccccaagagtaggtcattgttggaccgaactgggtaaacaattcttcggtgttgttctcttttctctac 38811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40630803 - 40630848
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  40630803 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 40630848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 44967952 - 44967818
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa-ctcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||| |||||| ||||||||||||| |  ||||||||||||||||| || ||| || | ||| |||| ||| ||||||||||||| ||||| || ||    
T  44967952 gagcttgctgaagccaatttcttgtaacca--tttgtatctctttgtaaaaaactcgttgagagtagattagagggatcaatctctcccccagaataagt 44967855  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgt 195  Q
    || ||||||||||| || | | |||||||||| ||||    
T  44967854 cactgttggaccgacctgggtaaacatttctttgtgt 44967818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 50674195 - 50674150
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  50674195 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 50674150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 7124992 - 7125046
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||    
T  7124992 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 7125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 379197 - 379243
Alignment:
Q  17 atgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||    
T  379197 atgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 379243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 5136155 - 5136224
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  5136155 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 5136224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 5138380 - 5138449
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  5138380 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 5138449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 44570489 - 44570432
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt 118  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  44570489 gagcttgttgaaactaatttcttgtaac-atttttgtatctctttgtaaagaactcatt 44570432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8647957 - 8648002
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  8647957 tgggaaacacaggagtggagagtcttttgtgagcaacttgggtgag 8648002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8665226 - 8665271
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  8665226 tgggaaacacaggagtggagagtcttttgtgagcaacttgggtgag 8665271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 26364084 - 26364129
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  26364084 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 26364129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 33989681 - 33989726
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  33989681 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 33989726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 41964234 - 41964279
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  41964234 tgggaaacacatgagtagagagtcttttgtgagcaacttgggtgag 41964279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 54881565 - 54881610
Alignment:
Q  277 gtctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||    
T  54881565 gtctatattgttgttattgcttgtggtttattttggttgttggttg 54881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 6677514 - 6677597
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctc 143  Q
    ||||||||||||||||||||||||||||   |||||||| ||||||| ||||| || || ||| |||||| ||||||||||||||    
T  6677514 gagcttgttgaagctaatttcttgtaac-ccttttgtatatctttgtaaagaagtctttgataatggatttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 34788898 - 34788851
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  34788898 gagcttgttgaagttaatttcttgtaact-cttttgtatctctttgtaa 34788851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 7122773 - 7122827
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||  ||||||||||||||||  |||||||||||||| |||||||||    
T  7122773 aagaactcatttgatagtggattggagagtacaatctctcctccatagtaggtca 7122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6655775 - 6655820
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||||    
T  6655775 tgggaaacacatgagtggagagtcatttctgagcaacttgggtgag 6655820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 12073215 - 12073256
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||    
T  12073215 aaacacatgagtgaagagtcttttgtgagcaacttgggtgag 12073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 35369534 - 35369440
Alignment:
Q  97 tatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 191  Q
    ||||||||||||| ||||||||| || ||| |||| |||| || ||||||||  || ||||||||||||||||||| ||| || | |||||||||||    
T  35369534 tatctctttgtaaagaactcattgatggtgaattgaagaggtcgatctctcc--catagtaggtcattgttggaccaaacaaggtaaacatttcttg 35369440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 54882839 - 54882884
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||| ||||||| ||| ||| ||||||||||||    
T  54882839 tgggaaacacatgagtgtagagtcttttgtgagaaacttgggtgag 54882884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 55085490 - 55085442
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgta 108  Q
    |||||||||||||||||||||||||||||   | ||||||||||||||||    
T  55085490 gtgagcttgttgaagctaatttcttgtaaacca-tttgtatctctttgta 55085442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 55085714 - 55085669
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| |||||||||| |||||    
T  55085714 tgggaaacacatgagtggagagtcatttgtgagcaacttgtgtgag 55085669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 32091527 - 32091570
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  32091527 ttgttgaaactaatttcttgtaact-cttttgtatctctttgtaa 32091570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 37755076 - 37754949
Alignment:
Q  69 tgaagctaatttcttgtaactaattttgtatctctttgtaagaa-ctcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttg 166  Q
    ||||| ||||||||||||||   |||| ||||||||| ||| || |||||| ||| ||| ||| |||||||||||||||| ||| ||||||| ||||||     
T  37755076 tgaagataatttcttgtaacctttttt-tatctctttctaaaaaactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgtta 37754978  T
Q  167 gaccgaactagatgaacatttcttggtgt 195  Q
    |||  |||| ||| || ||||||| ||||    
T  37754977 gactaaactggataaatatttcttagtgt 37754949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 50263047 - 50263011
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaac 54  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  50263047 tgggaaacacatgagtggagagtcttttgtgagcaac 50263011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 5e-90; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 8359442 - 8359174
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8359442 gtgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 8359343  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||    
T  8359342 tcattgttggaccgaactgggtgaacatttcttggtgttgttatcttttctctactctcattatcttgtttatcctttggttagattgtggttttgctat 8359243  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtggtttac-tttggttgttggttgcc 324  Q
    ||||||| ||| |||| ||| |||| ||| ||||||||||||||| ||||| |||| ||||||||||||    
T  8359242 gcacttgttttctagattagatctagattgttgttgttgcttgtgatttacttttgattgttggttgcc 8359174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 59 - 322
Target Start/End: Complemental strand, 32358179 - 32357916
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32358179 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 32358081  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       | ||||||||| | ||| ||  ||||||||||||||||    
T  32358080 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttaacttgtttattccttgcttgaattgtggttttgttat 32357982  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    ||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32357981 gcaattggattataaactaggtctatattattgttgttgcttgtggtttactttggttgttggttg 32357916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 306
Target Start/End: Complemental strand, 4508831 - 4508584
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||    
T  4508831 gtgagcttattgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgagagtggattggagagatcaatctcttcttcagagtagg 4508733  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    | |  ||||||||||||| | ||||||||||||||||||||||| |||||| |||       ||||||||||||||||||||  |||||||||||| |||    
T  4508732 ttaa-gttggaccgaactgggtgaacatttcttggtgttgttatattttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 4508634  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttta 306  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  4508633 gcacttggtttatagactaggtctatattgttgttattgcttgtggttta 4508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 29608780 - 29609026
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  29608780 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagatatcaatcactcctccagagtagg 29608878  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtgg-ttttgtta 256  Q
    |||  |||||||||||||   |||| |||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||| ||||| ||    
T  29608879 tca-agttggaccgaactgagtgaatatttcttggtgttgttatcttttctctactctctttatcttgtttatcctttgcttagattgtggtttttgata 29608977  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||||||||||| || | ||| |||| ||| ||||||||||||||||||    
T  29608978 tgcacttggtttctatattagatctagattgttgttgttgcttgtggtt 29609026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 65 - 303
Target Start/End: Complemental strand, 34310835 - 34310595
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       
T  34310835 ttgttgaagctaatttcttgtaacacattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagt 34310737  T
Q  164 ttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggttttgttatgcact 262  Q
    |||||||||||| | |||||| |  |||||||||||||||||||| |||       |||||||||| ||||||||||  |||||||||||| ||||||||    
T  34310736 ttggaccgaactgggtgaacaatctttggtgttgttatcttttctttactctctttatcttgtttattcctttggttgaattgtggttttgctatgcact 34310637  T
Q  263 tggtttatagacta-gtctatattattgttgttgcttgtggt 303  Q
    |||||||||||||| ||||||||| ||||| |||||||||||    
T  34310636 tggtttatagactaggtctatattgttgttattgcttgtggt 34310595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 58 - 321
Target Start/End: Complemental strand, 6360078 - 6359812
Alignment:
Q  58 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||| | |||    
T  6360078 ggtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagttgattggagagatcaatctcttccccatattag 6359980  T
Q  157 gtcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc-tctacnnnnnnnatcttgttta-tcctttggttagattgtggttttg 253  Q
    ||||  |||||| |||||| | | ||| |||||||||||||||||||||||| | | |       |||||||||| |||||  ||| |||||||||||||    
T  6359979 gtca-agttggatcgaactgggtcaacaatttcttggtgttgttatcttttcatttgctttctttatcttgtttattccttaagttggattgtggttttg 6359881  T
Q  254 ttatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggtt 321  Q
     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6359880 ctatgcacttggtttatagactaggtatatattattgttgttgcttgtggtttactttggttgttggtt 6359812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 268
Target Start/End: Complemental strand, 22328516 - 22328306
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtag 156  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||| || |||||| ||||||||| ||||||||||||||||| | |||||||    
T  22328516 gtgagcttgttgaagctaatttcttgtaactc-ttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtag 22328418  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    ||||||||||||||||||| | | || |||| ||||||||||||||||||||||||       ||||||||||| |||| ||| ||||||||||||||||    
T  22328417 gtcattgttggaccgaactgggtaaatattttttggtgttgttatcttttctctactctctttatcttgtttattcttttgttcgattgtggttttgtta 22328318  T
Q  257 tgcacttggttt 268  Q
    ||||||||||||    
T  22328317 tgcacttggttt 22328306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 48599459 - 48599213
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||     
T  48599459 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttggaagagctcattgatagtggattggagagatcaatctctcctccagagcaga 48599361  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | ||||||||||||| |||||||||||||||| |||       ||||||||||| | |||||| |||||| |||||| | |    
T  48599360 tca-agttggaccgaactgggtgaacatttcttgatgttgttatcttttctttactctctttatcttgtttattccttggttggattgtagttttgctgt 48599262  T
Q  258 gcacttggtttatagactag---tctatattattgttgttgcttgtggtt 304  Q
    |||||| | |||||||||||   | |||||||||||||||| ||||||||    
T  48599261 gcactt-gattatagactaggtctatatattattgttgttgtttgtggtt 48599213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 306
Target Start/End: Complemental strand, 4510673 - 4510426
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| || |||||||||||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| ||| |||||||||||||  ||||||||    
T  4510673 gtgagtttattgaagctaatttcttgtaacccattt-gtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtagg 4510575  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||| ||| | |||||||||||||||||||||||||||||| |||       ||||||||||||| || |||  |||||| ||||| |||    
T  4510574 tcaa-gttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctat 4510476  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttta 306  Q
    ||||||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  4510475 gcacttgatttatagactaggtctatattgttgttattgcttgtggttta 4510426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 306
Target Start/End: Complemental strand, 4512515 - 4512268
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| || |||||||||||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| ||| |||||||||||||  ||||||||    
T  4512515 gtgagtttattgaagctaatttcttgtaacccattt-gtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtagg 4512417  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||| ||| | |||||||||||||||||||||||||||||| |||       ||||||||||||| || |||  |||||| ||||| |||    
T  4512416 tcaa-gttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctat 4512318  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttta 306  Q
    ||||||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  4512317 gcacttgatttatagactaggtctatattgttgttattgcttgtggttta 4512268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 3259038 - 3259283
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  3259038 gtgagcttgtttaagctaatttattgtaactcattt-gtatctctttgtaaaaacccattgatagtggattggagagatcaatctctcctccagagtagg 3259136  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||| |||||||| | |||||||||| ||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| |||    
T  3259137 tca-agttgaaccgaactgggtgaacatttcctggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 3259235  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    || | || ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  3259236 gcccgtgttttctagattagatctagattgttgttattgcttgtggtt 3259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 2390325 - 2390574
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcat-tatagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2390325 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaataactcatatatagtggattggagagatcaatctctcctccagagtagg 2390423  T
Q  158 tcattgttggaccgaactagatgaa-catttcttggtgttgttat---cttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||  ||||||||||||||| ||||  || ||||||||||||| |    ||||||||||       |||||||||||||||| ||| |||||||||||||    
T  2390424 tca-agttggaccgaactaggtgaataatctcttggtgttgttgtttatttttctctactctctttatcttgtttatccttttgttggattgtggttttg 2390522  T
Q  254 ttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
     ||| || ||| ||| |||| ||| |||| ||| ||||| ||| ||||||||    
T  2390523 ctatacatttgttttctagattagatctagattgttgttattgattgtggtt 2390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 2361097 - 2360836
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||| ||||    
T  2361097 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggatttgagatatcaatctctcccccagattagg 2360999  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||| |||||||| | | || |    ||||||    | |||||||| ||        ||||||||||| | ||||||  |||||||||||| |||    
T  2360998 tca-agttgaaccgaactgggtcaataacctttggtg----tgtcttttctttattctctttatcttgtttattccttggttgaattgtggttttgatat 2360904  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    ||||||||||| ||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||    
T  2360903 gcacttggtttctagactaggtctatattgatgttgttgcttgtgatttactttggttgttggttgcc 2360836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 22270016 - 22270151
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22270016 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactgattgatagtggattggagagatcaatctctcctccagagtagg 22270114  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||||||||||||| | ||||||| |||||||||    
T  22270115 tca-agttggaccgaactgggtgaacatctcttggtgt 22270151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 23555083 - 23555208
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23555083 gtgaacttgttgaagctaatttcttgtaac-acttttgtacctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 23555181  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  23555182 tcaagtttggaccgaactgggtgaaca 23555208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 6432014 - 6432129
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  6432014 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctccttcagagtagg 6432112  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  6432113 tca-agttggaccgaact 6432129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 19502221 - 19502322
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  19502221 gtgagcttgtcaaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaag 19502319  T
Q  158 tca 160  Q
    |||    
T  19502320 tca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 30024857 - 30024733
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||||    
T  30024857 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatcactcccccagagtagg 30024759  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||  ||||||||||||| ||| ||||    
T  30024758 tca-agttggaccgaactggatcaaca 30024733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 23565186 - 23565085
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||||    
T  23565186 gtgagcttgttgaaactaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctctcctagagtagg 23565088  T
Q  158 tca 160  Q
    |||    
T  23565087 tca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 31518946 - 31519081
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc-ctccagagtag 156  Q
    |||||||| ||||||||| || ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||||    
T  31518946 gtgagcttattgaagctagtt-cttgtaactcattt-gtatctctttgtaagaactcattgacagtggattggagagatcaatctctctccccagagtag 31519043  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    ||||  ||||||||||||| ||| |||||||||||||||    
T  31519044 gtca-agttggaccgaactggataaacatttcttggtgt 31519081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 35853969 - 35854082
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  35853969 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 35854067  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  35854068 cgaactgggtgaaca 35854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 27347860 - 27347975
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||    
T  27347860 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattgcagagatcaatctctcccccagattagg 27347958  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  27347959 tca-agttggaccgaact 27347975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 31105518 - 31105385
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||| | |||||||     
T  31105518 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctttttgtaagaactcattgatggtggattggagagataaatctctccccaagagtaga 31105420  T
Q  158 tcattgttggaccgaactagatgaacatttcttggt 193  Q
    |||  ||||||||||||| | | |||||||||||||    
T  31105419 tca-agttggaccgaactgggtaaacatttcttggt 31105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 29991108 - 29991221
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  29991108 aagctaatttcttgtaaccc-ttttgtatctctttctaataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggac 29991206  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  29991207 cgaactgggtgaaca 29991221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 48491622 - 48491723
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  48491622 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgaaagaactcattgatagtggattggagagatcaatctctcccccagattagg 48491720  T
Q  158 tca 160  Q
    |||    
T  48491721 tca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 2759322 - 2759207
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| ||||    
T  2759322 gtgaacttgttgaagctaatttcttgtaactca-tttatatctctttgtaagaactcattgatagtggattggagatatcaatctcttccccagattagg 2759224  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  2759223 tca-agttggaccgaact 2759207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 25615900 - 25616012
Alignment:
Q  63 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 161  Q
    ||||||| ||||||||||||||||||  |||| |||||  |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||     
T  25615900 gcttgtttaagctaatttcttgtaacccattt-gtatcattttgtaagaactcattgatagtggattagagagatcaatctctcctccagagtaggtcaa 25615998  T
Q  162 tgttggaccgaact 175  Q
      ||||||||||||    
T  25615999 gtttggaccgaact 25616012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 31733094 - 31732979
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| | ||||    
T  31733094 gtgagcttggtgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatactggattggagagatcaatctctcccccaaattagg 31732996  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  31732995 tca-agttggaccgaact 31732979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 39731426 - 39731537
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  39731426 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 39731524  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  39731525 aactgggtgaaca 39731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 47674068 - 47673981
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47674068 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcc 47673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 48489479 - 48489589
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    |||||||||||||||||||||||||  |||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| ||||| |||||||      
T  48489479 cttgttgaagctaatttcttgtaacccattt-gtatctctttgcaataactcattcatagtggattggagagatcaatctctcccccagattaggtca-a 48489576  T
Q  163 gttggaccgaact 175  Q
    |||||||||||||    
T  48489577 gttggaccgaact 48489589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 36146532 - 36146416
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||    
T  36146532 gtgagcttgttgaagctaatttct-gtaacccattt-gtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcccccatattagg 36146435  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  36146434 tca-agttggaccgaactag 36146416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 496108 - 496007
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||| |||  |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| | | ||||||    
T  496108 gtgagcttgttgaagctaatttcttgcaacccattt-gtatctctttataagaactcattgatagtggattggagagatcaatctctcccctatagtagg 496010  T
Q  158 tca 160  Q
    |||    
T  496009 tca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 1113700 - 1113801
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||    
T  1113700 gtgagcttgttgaagctaatttcttataaccca-tttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattagg 1113798  T
Q  158 tca 160  Q
    |||    
T  1113799 tca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 4253654 - 4253518
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||||||||||||||| ||||||   |||| |||||||||| || ||||||||| ||| |||||| |||||||||||||||||  ||||||||    
T  4253654 gtgagcttgttgaagctaatttcatgtaaccc-ttttatatctctttggaaagaactcattgataatggattagagagatcaatctctcccacagagtag 4253556  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||| | |||||||||||||| | |||||||||||||||    
T  4253555 gtcaat-ttggaccgaactaggtaaacatttcttggtgt 4253518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 8153397 - 8153486
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  8153397 aagctaatttcttgtaactcattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 25767074 - 25766984
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  25767074 aagctaatttcttgtaaccccttttgtatctcttttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 14069946 - 14069843
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||  |||||||    
T  14069946 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca-agttggac 14069849  T
Q  170 cgaact 175  Q
    ||||||    
T  14069848 cgaact 14069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 14379974 - 14379871
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||  |||||||    
T  14379974 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaggtca-agttggac 14379877  T
Q  170 cgaact 175  Q
    ||||||    
T  14379876 cgaact 14379871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 41317559 - 41317444
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  |||||||||||||||||   |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  41317559 gtgagcttgtcaaagctaatttcttgtaatccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 41317461  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  41317460 tca-agttggaccgaact 41317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 4586204 - 4586291
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    |||| ||||||||||||||||| |||||||  ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4586204 gtgaacttgttgaagctaattttttgtaacccatttt-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcc 4586291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 26417359 - 26417446
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  26417359 gtgagcttgttgaagataatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcc 26417446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 47676255 - 47676137
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||| | |||||||  |    
T  47676255 ttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcaatgatagtggaatggagagatcaatctctcccccatattaggtca-ag 47676158  T
Q  164 ttggaccgaactagatgaaca 184  Q
    |||||||||||| ||| ||||    
T  47676157 ttggaccgaactggatcaaca 47676137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 18126687 - 18126788
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||| ||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| ||||    
T  18126687 gtgaacttgttcaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggaggaatcaatctctcccccagactagg 18126785  T
Q  158 tca 160  Q
    |||    
T  18126786 tca 18126788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 41649135 - 41649021
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| | ||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  41649135 gtgagcttgttta-gctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 41649038  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  41649037 tca-agttggaccgaact 41649021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 43864287 - 43864402
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||| ||||||  |||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||  ||||| ||||    
T  43864287 gtgaacttgttgaagctaatttcctgtaacccattt-gtatctctttgtaaaaactaattgatagtggattggagagatcaatctctctcccagattagg 43864385  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  43864386 tca-agttggaccgaact 43864402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 43504266 - 43504178
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||    
T  43504266 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtca 43504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 20343951 - 20344064
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||  |||||    
T  20343951 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca-agttgg 20344047  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  20344048 accgaactgggtgaaca 20344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 23344018 - 23344151
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||   ||| |||| ||||||| |||||||||| ||| | ||||||||| || ||||||||  ||||||||||    
T  23344018 gtgagcttgttgaagctaatttcttgtaac-cctttagtatatctttgtgagaactcattgataatagattggagaaattaatctctc--ccagagtagg 23344114  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  |||||||||||| || | |||||||||||||||    
T  23344115 tca-agttggaccgaacaaggtaaacatttcttggtgt 23344151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 18396367 - 18396477
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    |||||||| ||| ||| |||||||  ||||||||||||||| ||| ||| ||||| |||| ||||||||||||||||||||||||| ||||||||||| |    
T  18396367 ttgttgaacctatttttttgtaac--attttgtatctctttataaagaattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaat 18396464  T
Q  163 gttggaccgaact 175  Q
    | |||||||||||    
T  18396465 ggtggaccgaact 18396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 24525594 - 24525526
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||    
T  24525594 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 48408857 - 48408984
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   |||||||||||||| | || |||||||| |||||||||||||||| | |||||||||||||||||| ||||   || ||    
T  48408857 aagctaatttcttgtaaccccttttgtatctcttttgaaataactcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttaga 48408956  T
Q  169 ccgaactagatgaac-atttcttggtgt 195  Q
    ||||||| | ||||| ||||||||||||    
T  48408957 ccgaactgggtgaacaatttcttggtgt 48408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 3904726 - 3904626
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 172  Q
    |||||||||||||| | ||||| |||||||||||| ||||||||| |||||| ||  |||||||||||||||||  ||||||||||||||||||||||||    
T  3904726 taatttcttgtaac-acttttgcatctctttgtaaagaactcattgatagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccga 3904629  T
Q  173 act 175  Q
    |||    
T  3904628 act 3904626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 38671347 - 38671232
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| |||||||||| |||||||  |||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||| ||| ||| | ||||    
T  38671347 gtgagcttgtttaagctaatttattgtaacacattt-gtatcactttgtaagaactcattgatagtggattgaagagataaatctatcccccaaaatagg 38671249  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  38671248 tca-agttggaccgaact 38671232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 24789896 - 24790009
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||  |||||||||| |||| |||| ||||| || ||||||||||||||||  | ||||||||||||||||||||||   |||||    
T  24789896 aagctaatttcttgtaac--attttgtatcccttttgtaaaaactctttgatagtggattggagagtactatctctcctccagagtaggtcaagtttgga 24789993  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  24789994 ccgaactgggtgaaca 24790009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 1560749 - 1560675
Alignment:
Q  103 tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  1560749 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 1560675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 4178829 - 4178917
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||||||| | || |||||||||||||||||| ||||||    
T  4178829 aagctaatttcttgtaaccc-ttttgtatctctttg-aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 36574641 - 36574510
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||| ||||||||||||||||||||||||   |||| ||||||||||| ||||||||||| ||||||| |||||||||||||||  ||| | |||||||    
T  36574641 gtgagtttgttgaagctaatttcttgtaac-ccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatccatcc-ctagagtag 36574544  T
Q  157 gtcattgttggaccgaactagatgaacatttcttg 191  Q
    |||| | ||||||| |||| | | |||||||||||    
T  36574543 gtcaat-ttggaccaaactgggtaaacatttcttg 36574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 12097984 - 12097875
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||| ||||||||||||||  |||| ||||||||       ||||| || ||||||||||||||||| ||||||||| ||||| |||||    
T  12097984 gtgagcttgttgaagttaatttcttgtaacccattt-gtatctct-------aactctttgtagtggattggagagatgaatctctcccccagattaggt 12097893  T
Q  159 cattgttggaccgaactag 177  Q
    ||  |||||||||||||||    
T  12097892 ca-agttggaccgaactag 12097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 22269793 - 22269837
Alignment:
Q  19 gggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  22269793 gggaaacacatgagtggagagtctattgagagaaacttgggtgag 22269837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 18388838 - 18388760
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  18388838 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 18392274 - 18392196
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  18392274 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18392196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 31518838 - 31518896
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 118  Q
    |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  31518838 gtgagcttattgaagctagtttcttgtaactcattt-gtatctctttgtaagaactcatt 31518896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 32060400 - 32060322
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  32060400 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaaca 32060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2361320 - 2361275
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  2361320 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 2361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 29608555 - 29608600
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  29608555 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 29608600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 26639432 - 26639484
Alignment:
Q  123 tggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||| ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  26639432 tggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaact 26639484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 34311068 - 34311020
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  34311068 ggatggaaaacacatgagtggagagtcttttgtgagcaacttgggtgag 34311020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 5116679 - 5116758
Alignment:
Q  92 ttttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||| ||| || |  ||||||||||||    
T  5116679 ttttgtatctctttgtaaagaactcattgatagtgaattggagagataaatctctcccccatagcaaatcattgttggac 5116758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 6592418 - 6592340
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  6592418 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 6594636 - 6594558
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  6594636 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6594558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 8359667 - 8359622
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  8359667 tgggaaacacatgagtggagagtcttttgtgagcaacttggatgag 8359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 30814530 - 30814594
Alignment:
Q  111 aactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||||||||    
T  30814530 aactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaact 30814594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 4512737 - 4512694
Alignment:
Q  20 ggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||    
T  4512737 ggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 4512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 2390105 - 2390146
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||    
T  2390105 aaacacatgagtggatagtcttttgtgagcaacttgggtgag 2390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 4509055 - 4509010
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  4509055 tgggaaacacatgagtggagagtcatttgtgagcaactttggtgag 4509010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 4510897 - 4510852
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  4510897 tgggaaacacatgagtggagagtcatttgtgagcaactttggtgag 4510852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 191
Target Start/End: Complemental strand, 5513760 - 5513661
Alignment:
Q  92 ttttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttct 189  Q
    |||| ||||||||||||| ||||||||| | | || |||||||| ||||||||| |||||||||||||||| | |||||| ||||| | | |||||||||    
T  5513760 ttttatatctctttgtaaagaactcattgacactgaattggaga-atcaatctcacctccagagtaggtcaat-ttggactgaactgggtaaacatttct 5513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 6360257 - 6360216
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  6360257 aaacacatgagtggagagtcatttgtgagcaacttgggtgag 6360216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 6431794 - 6431835
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||    
T  6431794 aaacacatgagtgtagagtcttttgtgagcaacttgggtgag 6431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 22270220 - 22270257
Alignment:
Q  287 ttgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||| | |||||||||||||||||    
T  22270220 ttgttgttgcttgtggttaattttggttgttggttgcc 22270257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 30814669 - 30814706
Alignment:
Q  287 ttgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||| | |||||||||||||||||    
T  30814669 ttgttgttgcttgtggttaattttggttgttggttgcc 30814706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3258812 - 3258860
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||| ||||||||||||||| ||   |||||||||||||||    
T  3258812 ggatgggaaacatatgagtggagagtcttttattagcaacttgggtgag 3258860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 41819648 - 41819380
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41819648 gtgagcttgtctaagctaatttcttgtaacccattttgtatctctttgtaagaactcattatagtggattggagacatcaatctctcctccagagtaggt 41819549  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgtta-tcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||| |||| | ||||||||| |||||||||||| | ||||||||||       |||||||||||||||||||||||||||||||||| |||    
T  41819548 cattgttggaccaaactgggtgaacatttattggtgttgttatttttttctctactttctttatcttgtttatcctttggttagattgtggttttgctat 41819449  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtttac-tttggttgttggttgcc 324  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  41819448 gcacttggtttatggactaggtctatattgttgttgttgcttgtgatttacttttggttgttggttgcc 41819380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 46860517 - 46860763
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  46860517 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctttcctccagagtagg 46860615  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||| |||    
T  46860616 tcattgttggaccgaattggatgaacattttttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgctat 46860715  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||| || ||||||||| ||||||||| ||||||||    
T  46860716 gcacttggtttatagattaggtctatattgttgttgttgtttgtggtt 46860763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 30236168 - 30236414
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  30236168 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 30236266  T
Q  158 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||||| | |||| |||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||| ||||||||    
T  30236267 tcaa-gttggaccgaactaggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttataccttggttggattgtgtttttgtta 30236365  T
Q  257 tgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30236366 tgcacttggtttatagactaggtctatattgttgttgttgcttgtggtt 30236414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 303
Target Start/End: Original strand, 36018895 - 36019136
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||| ||    
T  36018895 gtgagcttgttgaagttaatttcttgtaactcattttgtatctctttgtaagaactcattatagtggattggagaggtcaatctctccccc--agtatgt 36018992  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatg 258  Q
      ||||||||||||||| ||||||||||| |||||||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||      
T  36018993 --ttgttggaccgaactggatgaacattttttggtgttgttatcttttttctactctctttatcttgtttatcctttggttagattgtggttttgttaaa 36019090  T
Q  259 cacttggtttatagactag-tctatattattgttgttgcttgtggt 303  Q
    |||||| ||| |||| ||| |||| ||| || ||||||||||||||    
T  36019091 cacttgttttctagattagatctagattgttattgttgcttgtggt 36019136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 49199595 - 49199344
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  49199595 gtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagactagg 49199496  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       ||||||||||||||||||||||||||||||||||    
T  49199495 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttg 49199396  T
Q  254 ttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
     |||||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  49199395 ctatgcacttgttttctagattagatctagattgttgttattgcttgtggtt 49199344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 324
Target Start/End: Original strand, 46173400 - 46173669
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||    
T  46173400 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaattcattgatagtggattggagagatcaatctctcccccagattagg 46173498  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtt 255  Q
    |||  ||||||||||||||||| ||| |||||||||||||||||||||||| | | |       |||||||||||   || ||| ||||||||||||| |    
T  46173499 tca-agttggaccgaactagatcaacaatttcttggtgttgttatcttttcttttgctttctttatcttgtttatttcttagttggattgtggttttgct 46173597  T
Q  256 atgcacttggtttatagactag---tctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||| |||   | |||||||||| ||||||||||||||||||||||||||||||||||    
T  46173598 atgcacttggtttatagaataggtttatatattattgctgttgcttgtggtttactttggttgttggttgcc 46173669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 68 - 304
Target Start/End: Complemental strand, 6095715 - 6095479
Alignment:
Q  68 ttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttg 166  Q
    |||||| ||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||    
T  6095715 ttgaagttaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttg 6095618  T
Q  167 gaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggt 266  Q
    |||||||||   |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||||||||| ||| ||||| ||    
T  6095617 gaccgaactgtgtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgccttggttggattgtggttttgctatacacttcgt 6095518  T
Q  267 ttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    |||||||||| ||||||||| ||||| ||||||||||||    
T  6095517 ttatagactaggtctatattgttgttattgcttgtggtt 6095479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 43401927 - 43401676
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  43401927 gtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaagaactcattgatagtggattggagaaattaatctctcctccagagtagg 43401828  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       |||||||||||||||||||||||||||| |||||    
T  43401827 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtgattttg 43401728  T
Q  254 ttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
     |||||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  43401727 ctatgcacttgttttctagattagatctagattgttgttattgcttgtggtt 43401676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 54593747 - 54593995
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  54593747 gtgagcttgttgaagctaatttattgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtatg 54593845  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggttttgt 254  Q
    |||  |||||||| |||| | |||||||||||||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||||     
T  54593846 tca-agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttagtctctctttatcttgtttattccttgctttggattgtggttttgc 54593944  T
Q  255 tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtt 304  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||||||||    
T  54593945 tatgcacatggtttatagactatgtctatattcttgttattgcttgtggtt 54593995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 43403870 - 43403619
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43403870 gtgagcttgttgaagctcatttcttgtaactcatgttttatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtagg 43403771  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttat---cttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||| ||||||||||||| | ||||| || ||||| ||||||| |    ||||||| ||       ||||||||||||||||||||||||||||||||||    
T  43403770 tcatggttggaccgaactgggtgaacaatctcttgatgttgttgtttatttttctccactctctttatcttgtttatcctttggttagattgtggttttg 43403671  T
Q  254 ttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
     |||||||||| ||| |||| ||| |||| ||| || || ||||||||||||    
T  43403670 ctatgcacttgttttctagattagatctagattgttattattgcttgtggtt 43403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 55302064 - 55301888
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 191  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||     
T  55302064 tttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacatttctta 55301965  T
Q  192 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggttt 268  Q
    ||||||||||||||||| |||       ||||||||||||||||||||  ||||||| |||| ||||||||||||||    
T  55301964 gtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcacttggttt 55301888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 322
Target Start/End: Original strand, 47304294 - 47304564
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||| |||| |||||||||  || | ||||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||| ||||    
T  47304294 gtgagcttgttgaagttaatatcttgtaacccatct-gtatctcttcgtaagaactcattgatagtggattggagagatcaatctctccccaagattagg 47304392  T
Q  158 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatcttttctctacnnnnnnn------atcttgtttatcctttggttagattgtggtt 250  Q
    |||  ||| ||||||||| | | |||| ||| |||||||||||||||||||| | |             ||||||||||| | || ||| ||||||||||    
T  47304393 tcaa-gtttgaccgaactgggtcaacaatttattggtgttgttatcttttcttttcttttgctttctttatcttgtttattccttagttggattgtggtt 47304491  T
Q  251 ttgttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  47304492 ttgctatgcacttggtttatagactaggtctatattattgttgttgcttgtgatttactttggttgttggttg 47304564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 59 - 208
Target Start/End: Original strand, 4569995 - 4570144
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  4569995 gtgagcttattgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctactccagagtagg 4570093  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 208  Q
    | |   |||||||||||| | | ||||||||||||||||||||| ||||||    
T  4570094 tgaagtttggaccgaactgggtcaacatttcttggtgttgttatattttct 4570144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 34491255 - 34491379
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34491255 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 34491353  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||  ||||||||||||| | ||||||    
T  34491354 tca-agttggaccgaactgggtgaaca 34491379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 7762308 - 7762433
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7762308 gtgaacttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 7762406  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  7762407 tcaagtttggaccgaactgggtgaaca 7762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 32891147 - 32891282
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||| ||||||||| || |||||||    
T  32891147 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcgttgatagtggattggagagataaatctctcccccggagtagg 32891245  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    ||| |||||||||||||| ||| | |||||||||||||    
T  32891246 tca-tgttggaccgaactggataatcatttcttggtgt 32891282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 324
Target Start/End: Complemental strand, 31340186 - 31340081
Alignment:
Q  220 atcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtttactttggttgttg 318  Q
    ||||||||||| | || ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31340186 atcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctatattattgttgttgcttgtggtttactttggttgttg 31340087  T
Q  319 gttgcc 324  Q
    ||||||    
T  31340086 gttgcc 31340081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 75 - 264
Target Start/End: Original strand, 40913352 - 40913544
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||    
T  40913352 taatttcttgtaactcattt-gtatctctttgtaagaactcatcgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaa 40913449  T
Q  174 ctagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttg 264  Q
    || | | ||| || |||||||||| || ||   |||||||||        |||||||||||||||||||||||||||||||||| ||||||||||    
T  40913450 ctgggtcaacaatctcttggtgttattgtctatttttctctaatctctttatcttgtttatcctttggttagattgtggttttgctatgcacttg 40913544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 7764507 - 7764608
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  7764507 gtgaacttgttaaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatgaatctctcctccagagtagg 7764605  T
Q  158 tca 160  Q
    |||    
T  7764606 tca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 9581325 - 9581450
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||| ||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9581325 gtgagcttgtttaagctaatttcttttaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 9581423  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  9581424 tcaagtttggaccgaactgggtgaaca 9581450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 40735426 - 40735541
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  40735426 gtgagcttgttgaagctaatttattgtaaccagttt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 40735524  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  40735525 tca-agttggaccgaact 40735541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 19684002 - 19683889
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||   ||||||    
T  19684002 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggac 19683904  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  19683903 cgaactgggtgaaca 19683889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 29810911 - 29811012
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  29810911 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 29811009  T
Q  158 tca 160  Q
    |||    
T  29811010 tca 29811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 45095218 - 45095331
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||    
T  45095218 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggac 45095316  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  45095317 cgaactgggtgaaca 45095331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 29813106 - 29813221
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  29813106 gtgaacttgttgaagctaatttcttgtaacccattt-gcatctctttgtaagaactcatttatagtggattggagagatcaatctctcccccagatttgg 29813204  T
Q  158 tcattgttggaccgaact 175  Q
    ||| ||||||||||||||    
T  29813205 tca-tgttggaccgaact 29813221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 44331588 - 44331703
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||    
T  44331588 gtgagcttgttgaagctaatttcttgtaagccattt-gtatctctttgtaagaacttattgatagtggattggagagatcaatctctcccccagattagg 44331686  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  44331687 tca-agttggaccgaact 44331703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 51398857 - 51398972
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||| ||||    
T  51398857 gtgaacttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggattggagagatttatctctcccccagattagg 51398955  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  51398956 tca-agttggaccgaact 51398972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 53921628 - 53921493
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||||||||| || ||||||     
T  53921628 gtgagcttgttaaagctaatttcttgtaactcattt-gtatcattttgtaagaactcattgatagtggattggagagatcaatctctcccccggagtaga 53921530  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||| ||||||||| ||| |||||||||| ||||    
T  53921529 tca-agtttgaccgaactggataaacatttcttagtgt 53921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 760890 - 760991
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  760890 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 760988  T
Q  158 tca 160  Q
    |||    
T  760989 tca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 16499075 - 16499187
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  16499075 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 16499173  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  16499174 -agttggaccgaact 16499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 37408513 - 37408602
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  37408513 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 22835127 - 22835012
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  22835127 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctccgccatattagg 22835029  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  22835028 tca-agttggaccgaact 22835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 40734541 - 40734656
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  40734541 gtgagcttgttgaacctaatttcttgtaacacattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 40734639  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  40734640 tca-agttggaccgaact 40734656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 801148 - 801260
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  801148 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 801247  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  801248 aactgggtgaaca 801260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 44700603 - 44700487
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | ||||    
T  44700603 gtgagtttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcc-ccacattagg 44700506  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  44700505 tca-agttggaccgaactag 44700487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 5258257 - 5258144
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||   ||||||    
T  5258257 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggac 5258159  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  5258158 cgaacttggtgaaca 5258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 23198052 - 23197939
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||    
T  23198052 aagctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggac 23197954  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  23197953 cgaactgggtgaaca 23197939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 23200251 - 23200138
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||    
T  23200251 aagctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggac 23200153  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  23200152 cgaactgggtgaaca 23200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 39153486 - 39153385
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||| |||| ||||| |||| |||||||||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  39153486 gtgagcttgtttaagctaatttcttgtaactcattt-gtatccctttataagaactcattgatagtggattggagagaacaatctctcccccagattagg 39153388  T
Q  158 tca 160  Q
    |||    
T  39153387 tca 39153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 29196511 - 29196396
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  |||||||||||||| |||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  29196511 gtgagcttgtcaaagctaatttcttggaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 29196413  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  29196412 tca-agttggaccgaact 29196396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 5260436 - 5260323
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||   ||||||    
T  5260436 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggac 5260338  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  5260337 cgaacttggtgaaca 5260323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 7780114 - 7780028
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  7780114 ctaatttcttgtaacc--ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 29682402 - 29682517
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||| ||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||     
T  29682402 gtgagcttgtttaagctaatttcttgtcacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaga 29682500  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  29682501 tca-agttggaccgaact 29682517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 31314488 - 31314603
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  | ||||||||| ||||||||||||| || |||||||||||||||||||||| ||||| ||| | ||||    
T  31314488 gtgatcttgttgaagctaatttcttgtaaccca-tttgtatctttttgtaagaactctttgatagtggattggagagatcaatatctcccccatattagg 31314586  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  31314587 tca-agttggaccgaact 31314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 32744561 - 32744446
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||| || ||||||||||| |||||| ||||| ||| ||||| ||||    
T  32744561 gtgagcttgtttaagctaatttcttgtaactca-tttgtatcactttgtaagaactctttgatagtggattgaagagataaatctatcccccagattagg 32744463  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  32744462 tca-agttggaccgaact 32744446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 9636236 - 9636150
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||   |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  9636236 ctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtca 9636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 5236581 - 5236481
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||| ||||||||||||| ||| ||||| ||||    
T  5236581 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgataatggattcgagagatcaatctttcc-ccagattagg 5236484  T
Q  158 tca 160  Q
    |||    
T  5236483 tca 5236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 33191877 - 33192009
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||| |||||||||| |   || ||| ||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  33191877 gagcttgttgaagctaagttcttgtaacca---ttttatgtctttgtaaagaactcattgatagtggattagagagatcaatctct-ctccagaggaggt 33191972  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||||||||||  |||| | | ||||||| |||||||    
T  33191973 cattgttggacaaaacttggtaaacattttttggtgt 33192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 9666591 - 9666476
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | ||| || ||||||||||||| || || ||||||||||||||||||  |||||||| ||||| ||||    
T  9666591 gtgagcttgttgaagctaatttcttgtaactca-tttatacctctttgtaagaattctttgatagtggattggagagattgatctctcccccagattagg 9666493  T
Q  158 tcattgttggaccgaact 175  Q
    | |  |||||||||||||    
T  9666492 t-aaagttggaccgaact 9666476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 35138832 - 35138694
Alignment:
Q  58 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 155  Q
    |||||| ||||||||| |||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||| | ||||| ||||||| || | | ||||    
T  35138832 ggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctcccc-caaaagta 35138735  T
Q  156 ggtcattgttggaccgaactagatgaacatttcttggtgtt 196  Q
    ||||||||||| ||||||   ||| ||||||||||||||||    
T  35138734 ggtcattgttgaaccgaatcggataaacatttcttggtgtt 35138694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 4055874 - 4055773
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttggaccg 171  Q
    ||||||||||||||   ||||||||||||||||||| |||||||| ||||||||||| |||||||  ||||||| ||||| ||||||||||||||| |||    
T  4055874 taatttcttgtaacctcttttgtatctctttgtaagaaactcattgatagtggattgaagagatc--tctctcccccagatgtaggtcattgttgggccg 4055777  T
Q  172 aact 175  Q
    ||||    
T  4055776 aact 4055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 6716554 - 6716667
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  6716554 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 6716651  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  6716652 ccgaactgggtgaaca 6716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 54635179 - 54635292
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  54635179 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 54635276  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  54635277 ccgaactgggtgaaca 54635292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 31340326 - 31340268
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 118  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  31340326 gtgagcttgttgaagctaatttcatgtaactca-tttgtatctctttgtaagaactcatt 31340268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 45283071 - 45283145
Alignment:
Q  103 tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  45283071 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 45283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 252
Target Start/End: Original strand, 20937701 - 20937893
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||| || ||||||||| ||| | |||||||||||||||||  ||| ||| |||| ||    
T  20937701 gagcttgttgaagttaatttcttgtaaccc-ttttgtatctctttgaaaagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgt 20937798  T
Q  159 cattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 252  Q
    ||| ||||||| ||||||| | ||| |||  || |||| ||| ||||||||||||       |||||||||||  ||||||| ||||||| ||||    
T  20937799 catagttggacagaactaggtaaacaattattttgtgtggttctcttttctctactctctttatcttgtttattatttggttcgattgtgatttt 20937893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 23392034 - 23391919
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||| ||||||||||||||  |||| ||||| ||||| |||||||| || ||||||||||| |||||| ||||||||| ||| | ||||    
T  23392034 gtgagcttgtttaagataatttcttgtaacccattt-gtatcactttgcaagaactctttgatagtggattgtagagataaatctctcccccaaattagg 23391936  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  23391935 tca-agttggaccgaact 23391919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 39127589 - 39127745
Alignment:
Q  58 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atag-tggattggagagatcaatctctcctccagagt 154  Q
    |||||||||||||||||||||||||| ||  |  |||||||||| || ||||  |||||||| |||  |||||| || |||||||||||||||||||||     
T  39127589 ggtgagcttgttgaagctaatttcttatagttt-ttttgtatcttttcgtaaataactcattgataaatggatttgaaagatcaatctctcctccagagc 39127687  T
Q  155 aggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctac 212  Q
    ||||||||||||||| |||||  || ||| ||||||| | || || | ||||||||||    
T  39127688 aggtcattgttggactgaacttaataaacttttcttgatattattcttttttctctac 39127745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 4075581 - 4075480
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttggaccg 171  Q
    ||||||||||||||   ||||||||| ||||||||| ||||| || ||||||||||||||||||||  |||||| ||||| ||||||||||||||| |||    
T  4075581 taatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtcattgttgggccg 4075484  T
Q  172 aact 175  Q
    ||||    
T  4075483 aact 4075480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 5434001 - 5433901
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcattatagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||   |||| ||||||||||||| ||||        ||||||||||||||||||||||||||||| ||||||    
T  5434001 gtgagcttgttaaagctaatttcttgtaaccc-ttttatatctctttgtaaagaaccg------gtggattggagagatcaatctctcctccatagtagg 5433909  T
Q  158 tcattgtt 165  Q
    ||||||||    
T  5433908 tcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 27305775 - 27305720
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  27305775 atagtggattggagagatcaatctctcctccaaagtaggtcaat-ttggaccgaact 27305720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 28074432 - 28074480
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  28074432 ggatgggaaacacatgagtggagagtctattgagagaaacttaggtgag 28074480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 3617540 - 3617618
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  3617540 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 3617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 25637517 - 25637586
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  25637517 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 25637586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 4569770 - 4569815
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4569770 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 4569815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 46860287 - 46860335
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  46860287 ggatgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 46860335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 145
Target Start/End: Complemental strand, 51352235 - 51352150
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc 145  Q
    |||||||| || ||| |||||||||||||| |  ||||||| ||||||||| |||||||| | |||||||| ||||||||||||||||    
T  51352235 gtgagctttttaaagttaatttcttgtaacca--tttgtatttctttgtaataactcattgagagtggatttgagagatcaatctctc 51352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 4598601 - 4598532
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  4598601 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 4598532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10056309 - 10056378
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10056309 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10056378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10058531 - 10058600
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10058531 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10058600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10060753 - 10060822
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10060753 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10060822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10062975 - 10063044
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10062975 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10063044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10065197 - 10065266
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10065197 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10065266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 10211485 - 10211554
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10211485 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 23410454 - 23410353
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||| | ||||  |||| ||||| |||||||||||||| |  ||| |||||||||||||| ||||||||| ||| | ||||    
T  23410454 gtgagcttgtttaagctaatttcgtataacccattt-gtatcactttgtaagaactcttagataatggattggagagataaatctctcccccaaattagg 23410356  T
Q  158 tca 160  Q
    |||    
T  23410355 tca 23410353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 6095948 - 6095903
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  6095948 tgggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 6095903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 2075140 - 2075065
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||||||||| ||||||||||||||||| | |||||||||||  |||||| |||||| | | ||||||||| |||||    
T  2075140 atagtggatttgagagatcaatctctccccgagagtaggtca-agttggatcgaactgggtaaacatttctgggtgt 2075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 36018667 - 36018715
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||| |||||||||  ||| ||||||||||||||||    
T  36018667 ggatgggaaacacatgaatggagagtcatttgtgagcaacttgggtgag 36018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 54593521 - 54593569
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||| ||||||||||||||||||||| ||| |||||||||| |||||    
T  54593521 ggatggaaaacacatgagtggagagtcttttgtgagcaacttgagtgag 54593569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 5434224 - 5434181
Alignment:
Q  20 ggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||    
T  5434224 ggaaacacatgagtggagagtcttttgtgagcaagttgggtgag 5434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 10209265 - 10209319
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||    
T  10209265 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10209319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 4600822 - 4600753
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| |||||||| |||||||||||   ||||||||||||    
T  4600822 aagaactcatttgatagtggattggagagtacaaactctcctctagagtaggtcaagtttggaccgaact 4600753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 49199820 - 49199778
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggt 60  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||    
T  49199820 tgggaaacatatgagtggagagtcttttgtgagcaacttgggt 49199778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 34491036 - 34491077
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  34491036 aaacacatgagtggagagtcatttgtgagcaacttgggtgag 34491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 34491459 - 34491496
Alignment:
Q  287 ttgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    |||||||||||||||||| | |||||||||||||||||    
T  34491459 ttgttgttgcttgtggttcattttggttgttggttgcc 34491496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40913158 - 40913203
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||| |||||| |||||||||    
T  40913158 tgggaaacacatgagtggagagtcatttgtgagcaaattgggtgag 40913203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 40913545 - 40913578
Alignment:
Q  287 ttgttgttgcttgtggtttactttggttgttggt 320  Q
    ||||||| ||||||||||||||||||||||||||    
T  40913545 ttgttgtggcttgtggtttactttggttgttggt 40913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 43404078 - 43404037
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  43404078 aaacacatgagtggagagtcatttgggagcaacttgggtgag 43404037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 5270580 - 5270680
Alignment:
Q  224 tgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatat-tattgttgttgcttgtggtttactttggttgttggtt 321  Q
    ||||||| |||||||| |||||||||||||   | |||||||||  |||| ||| |||| || |||||||||||||||||||||  ||| ||| ||||||    
T  5270580 tgtttattctttggttcgattgtggttttgcattacacttggttgctagattagatctagatctattgttgttgcttgtggtttttttttgttattggtt 5270679  T
Q  322 g 322  Q
    |    
T  5270680 g 5270680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 24635306 - 24635345
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctcttt 105  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  24635306 ttgttgaagctaattttttgtaact-attttgtatctcttt 24635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 25491091 - 25491003
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctcca 150  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| ||||| ||||| |||||| | ||||||||||  |||||||||||    
T  25491091 gagcttgttgaagctgatttcttat-actccttttgtatctctttgtaaagaaatcattgatagtgaagtggagagatc--tctctcctcca 25491003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 3e-85; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 60 - 318
Target Start/End: Complemental strand, 27637737 - 27637477
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    |||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27637737 tgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctgcagagtaggtc 27637638  T
Q  160 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgc 259  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||| |||       ||||||||||| | || ||| ||||||||||||| |||||    
T  27637637 attgttggaccgaactgggtgaatatttcttggtgttgttatcttttctttactctctttatcttgtttattccttagttggattgtggttttgctatgc 27637538  T
Q  260 acttggtttatagacta-gtctatattattgttgttgcttgtggtttac-tttggttgttg 318  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||    
T  27637537 acttggtttatagactaggtctatattgttgttgttgcttgtgatttacttttggttgttg 27637477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 264
Target Start/End: Original strand, 40147304 - 40147508
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40147304 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 40147402  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | ||||||||| || ||||| ||||||||||| |||       ||||||||||||||||||||  ||||||||||||||||    
T  40147403 tca-agttggaccgaactgggtgaacatttttttgtgtttttatcttttctttactctatttatcttgtttatcctttggttgaattgtggttttgttat 40147501  T
Q  258 gcacttg 264  Q
    |||||||    
T  40147502 gcacttg 40147508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 59 - 305
Target Start/End: Original strand, 213508 - 213758
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  213508 gtgagcttgttaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtagg 213606  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggttttgt 254  Q
    |||   |||||||||||| | ||||||||||||||||||||||||||| || ||  |       |||||||||| |||||   || |||||||||||||     
T  213607 tcaagtttggaccgaactgggtgaacatttcttggtgttgttatctttcctttactctctctttatcttgtttattccttgcttttgattgtggttttgc 213706  T
Q  255 tatgcacttggtttatagacta-gtctatattattgttgttgcttgtggttt 305  Q
    ||||||||| ||| |||||||| ||||||||| ||||| |||||||||||||    
T  213707 tatgcacttagttaatagactaggtctatattgttgttattgcttgtggttt 213758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 324
Target Start/End: Original strand, 5058088 - 5058358
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||| ||||||||| |  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5058088 gtgagcttgttgaagctattttcttgtatcccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtagg 5058186  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || |||| |||||||  ||    
T  5058187 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattatggttttacta 5058285  T
Q  257 tgcacttggtttatagactag---tctatattattgttgttgcttgtggtttac---tttggttgttggttgcc 324  Q
    ||||||| | |||||||||||   | |||||| |||||||||||||||||| ||   |||||||||||||||||    
T  5058286 tgcactt-gattatagactaggtctatatattgttgttgttgcttgtggttaacatttttggttgttggttgcc 5058358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 27015599 - 27015831
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 191  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| | |||||||  ||||||||||||| | ||||||||| |||    
T  27015599 tttgtatctctttgtaagaactcattgatagtggattgtacagatcaatctctcctccaaaataggtcaa-gttggaccgaactgggtgaacattttttg 27015697  T
Q  192 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag---tctatattatt 288  Q
    |||| ||||| |||||| |||       ||||||||||| ||||||||  |||||||||||| |||||||||| || |||||||||   | |||||| ||    
T  27015698 gtgt-gttattttttctttactctctttatcttgtttatgctttggttgaattgtggttttgatatgcacttgatt-atagactaggtatatatattgtt 27015795  T
Q  289 gttgttgcttgtggtttactttggttgttggttgcc 324  Q
    ||||||||||||| |||||||||||||||| |||||    
T  27015796 gttgttgcttgtgatttactttggttgttgattgcc 27015831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 13239794 - 13239930
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13239794 gtgaacttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13239892  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||   |||||||||||| | |||||| || |||||||    
T  13239893 tcaaatttggaccgaactgggtgaacaatttttggtgt 13239930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 16641062 - 16640818
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||| ||||||  |||||  |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  16641062 gtgagcttgttgaagctgatttctgataactc-ttttgtatctctttgtaagaact--tgatagtggattggagagatcaatctctcctccagagtaggt 16640966  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctct--acnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    ||  || || ||||||| | | |||||||||||||||||||||||||||| |   |       |||||| |||| |||| |||| |||||||||||||||    
T  16640965 ca-agtagggccgaactgggtaaacatttcttggtgttgttatcttttctttgctctctatttatcttgcttattctttagttaaattgtggttttgtta 16640867  T
Q  257 tgcacttggtttatagact-agtctatattattgttgttgcttgtggtt 304  Q
    |||| ||| ||| |||| | | |||| ||| ||||||||||||||||||    
T  16640866 tgcatttgatttctagattaaatctagatttttgttgttgcttgtggtt 16640818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 28278359 - 28278494
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  28278359 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcctccagagtagg 28278457  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||||||||||||| | |||||| ||||||||||    
T  28278458 tca-agttggaccgaactgggtgaacaattcttggtgt 28278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 16452124 - 16452258
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  16452124 tgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattcatagtggattggagagataaatctctcccccagagtaggt 16452222  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgt 195  Q
    ||  ||||||||||||| | | |||||||||||||||    
T  16452223 ca-agttggaccgaactgggtaaacatttcttggtgt 16452258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 316807 - 317014
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||| ||| ||||| |||| ||||||||||||| | |||||||||    
T  316807 gagcttgttgaagctaatttcttgtaa-tccttttgtatctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggt 316905  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatg 258  Q
    ||||||||||||||||| | | |||| ||||| |||||||| ||||||| ||||       || |||||||| ||||||||  |||||||||||| | |     
T  316906 cattgttggaccgaacttggtaaacaattctttgtgttgttctcttttccctactctctttattttgtttattctttggttcaattgtggttttgcttta 317005  T
Q  259 cacttggtt 267  Q
    |||||||||    
T  317006 cacttggtt 317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 37439200 - 37439309
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  37439200 taatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 37439298  T
Q  174 ctagatgaaca 184  Q
    || | ||||||    
T  37439299 ctgggtgaaca 37439309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 9049467 - 9049332
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  9049467 gtgagcttgttgaagctaatttcttgtaac-cattttgtatctctttgtaagaactcattgacagtggattggagagatcaatatctcccccaaagtagg 9049369  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    | |  ||||||||||| | ||| ||||||| |||||||    
T  9049368 tga-agttggaccgaaatggataaacattttttggtgt 9049332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 538068 - 538192
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||    
T  538068 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattagg 538166  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||  ||||||||||||| ||| ||||    
T  538167 tca-agttggaccgaactggatcaaca 538192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 25412815 - 25412904
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25412815 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 13488246 - 13488361
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||    
T  13488246 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccgagattagg 13488344  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  13488345 tca-agttggaccgaact 13488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 42428555 - 42428440
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  42428555 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagg 42428457  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  42428456 tca-agttggaccgaact 42428440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 4160701 - 4160850
Alignment:
Q  118 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnn 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | || |||| || ||||||||||||||||| |           
T  4160701 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggtaaatatttattagtgttgttatcttttctatgttctca 4160800  T
Q  218 nnatcttgtttatcctttggttagattgtggttttgttatgcacttggtt 267  Q
      ||||||||||| |||||||| |||| |||||||| | | |||||||||    
T  4160801 ttatcttgtttattctttggttcgattatggttttgctttacacttggtt 4160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 13343116 - 13343228
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||| |  ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||    
T  13343116 aagctaatttcttgtaa-tccttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggac 13343213  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  13343214 cgaactgggtgaaca 13343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 36074155 - 36074043
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||   ||||||    
T  36074155 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggac 36074058  T
Q  170 cgaactagatgaaca 184  Q
    |||||| ||||||||    
T  36074057 cgaactggatgaaca 36074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 533812 - 533927
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| | ||||    
T  533812 gtgagcttgttgaagctaattttttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcccccatattagg 533910  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  533911 tca-agttggaccgaact 533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 9789335 - 9789224
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  9789335 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 9789237  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  9789236 aactgggtgaaca 9789224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 16409532 - 16409643
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  16409532 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 16409630  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  16409631 aactgggtgaaca 16409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 26177939 - 26178050
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  26177939 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 26178037  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  26178038 aactgggtgaaca 26178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 8566071 - 8565954
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| || |||||||||||||| |||||||||||||||||||||||||||  ||||| ||||    
T  8566071 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctctgtaagaactcattgatagtggattggagagatcaatctctcacccagattagg 8565973  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  8565972 tca-agttggaccgaactag 8565954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 13695816 - 13695680
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||| |||||||||| ||||||||| ||||||| | ||||||||||| |||||    
T  13695816 gtgagcttgttaaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtag 13695718  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    ||||   ||||||| |||||| | |||||||||||||||    
T  13695717 gtca-acttggaccaaactaggtaaacatttcttggtgt 13695680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 30182643 - 30182756
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   |||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||   ||||||    
T  30182643 aagctaatttcttgtaaccc-ttttctatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggac 30182741  T
Q  170 cgaactagatgaaca 184  Q
    |||||| ||||||||    
T  30182742 cgaactggatgaaca 30182756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 33831723 - 33831824
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| | ||||    
T  33831723 gtgagcttgtttaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccatattagg 33831821  T
Q  158 tca 160  Q
    |||    
T  33831822 tca 33831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 42310060 - 42309963
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||| ||| |||||    
T  42310060 gtgagcttgttgaagctaatttcttgtaact-cttttgtatctctttgtaagaacttattgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 32636879 - 32636982
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||  |||||||    
T  32636879 aagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggac 32636976  T
Q  170 cgaact 175  Q
    ||||||    
T  32636977 cgaact 32636982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 42426354 - 42426243
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||||||  |    
T  42426354 ttgttgaagctaatttcttgcaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccctgattaggtca-ag 42426257  T
Q  164 ttggaccgaactag 177  Q
    |||||| |||||||    
T  42426256 ttggactgaactag 42426243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 18441759 - 18441648
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||   ||||||||    
T  18441759 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccg 18441661  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  18441660 aactgggtgaaca 18441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 30683049 - 30682932
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa--ctcatt-atagtggattggagagatcaatctctcctccagagta 155  Q
    |||| |||||||||||||||||||||||||   |||||||| ||||||||||||  |||||| |||||||||||||||||||||||||||| ||||| ||    
T  30683049 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagatta 30682951  T
Q  156 ggtcattgttggaccgaact 175  Q
    |||||  |||||||||||||    
T  30682950 ggtca-agttggaccgaact 30682932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 39468674 - 39468587
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  39468674 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattagagagatcaatctctcc 39468587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 28750774 - 28750667
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||| ||||||| ||||||  |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  |    
T  28750774 ttgttgaagttaatttcctgtaacccattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-ag 28750677  T
Q  164 ttggaccgaa 173  Q
    ||||||||||    
T  28750676 ttggaccgaa 28750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 38747048 - 38747135
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||| || |||||||| |||| |||||||||||||||||||||||    
T  38747048 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttggaaaaactcattgatagaggattggagagatcaatctctcc 38747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 10593312 - 10593426
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  10593312 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 10593409  T
Q  168 accgaactagatgaaca 184  Q
    |||||||| | ||||||    
T  10593410 accgaactgggtgaaca 10593426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 26170848 - 26170930
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||||| | ||||||    
T  26170848 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 3075783 - 3075648
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||| |||| |||||||||||||||  |||| |||||| |||||||||| || || |||||| |||||||||||||||||||||  || ||||||    
T  3075783 gtgagcttgctgaatctaatttcttgtaacccattt-gtatctttttgtaagaattcgttgatagtgaattggagagatcaatctctccctcatagtagg 3075685  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  |||||||| || | | |||||||||||||||||    
T  3075684 tca-agttggaccaaattgggtgaacatttcttggtgt 3075648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 33906154 - 33906042
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||| |||||||| ||||||||| |  |||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||| | | |||||||||    
T  33906154 gagcttgtcgaagctaacttcttgtaa-tccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggt 33906056  T
Q  159 cattgttggaccga 172  Q
    || |||||||||||    
T  33906055 caatgttggaccga 33906042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 40751195 - 40751284
Alignment:
Q  235 tggttagattgtggttttgttatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttac-tttggttgttggttg 322  Q
    |||||| |||||||||||| ||||||||||||||||||| || ||||||||| ||||| ||||||||||||||| ||||||| |||||||    
T  40751195 tggttaaattgtggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttgtggtttacatttggttattggttg 40751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 177
Target Start/End: Complemental strand, 10054935 - 10054823
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    ||||||||||||||||||| ||||   |||||||||||||||||| ||||||||| |||||| |||||||| |||||| ||||| ||| ||| ||| |||    
T  10054935 ttgttgaagctaatttcttataacc--ttttgtatctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaatt 10054838  T
Q  163 gttggaccgaactag 177  Q
    |||||||| ||||||    
T  10054837 gttggaccaaactag 10054823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 31183015 - 31183129
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| ||||| ||| |||||||||||||| |  |||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||| ||| | ||||    
T  31183015 gtgagtttgtttaagttaatttcttgtaacca--tttgtatccctttgtaagaactcattgatactggattggagagatctatctctcccccatattagg 31183112  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  31183113 tca-agttggaccgaact 31183129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 29722582 - 29722692
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  29722582 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccg 29722679  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  29722680 aactgggtgaaca 29722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 29751270 - 29751160
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  29751270 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 29751173  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  29751172 aactgggtgaaca 29751160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 22536403 - 22536290
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || |||||||||||| |||  ||||||||||||||||||||||||   |||||    
T  22536403 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtcaagtttgga 22536306  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  22536305 ccgaactgggtgaaca 22536290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 30793210 - 30793314
Alignment:
Q  91 attttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttc 188  Q
    ||||||||||||||||||| ||||| ||| |||||| | ||||||||||  ||||||| | |||||| |||||||||||||||||| || | ||||||||    
T  30793210 attttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttc 30793307  T
Q  189 ttggtgt 195  Q
    |||||||    
T  30793308 ttggtgt 30793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 3325958 - 3326063
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactc-attatagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||| || || ||||||| ||||||||||| ||||   || |||||||    
T  3325958 gagcttgttgaagctaatttcttgtaac-cattgtgtatctctttgtaaagaactcaatgatggtggattagagagatcaatatctctcacatagtaggt 3326056  T
Q  159 cattgtt 165  Q
    |||||||    
T  3326057 cattgtt 3326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 42926911 - 42926968
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 118  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  42926911 tgagattgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcatt 42926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 29720422 - 29720532
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  |||||||||||| |||||||||||   ||||||||    
T  29720422 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccg 29720519  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  29720520 aactgggtgaaca 29720532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 25078211 - 25078289
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25078211 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 25136180 - 25136258
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25136180 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25136258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 40380181 - 40380259
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  |||||||||||||||| |||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  40380181 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40380259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 40382392 - 40382470
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  |||||||||||||||| |||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  40382392 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 42926967 - 42927069
Alignment:
Q  93 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 191  Q
    |||||||||||||||||||||||||| | ||||||||| ||| || ||||||||   || |||||||||  ||||||||||||| | | |||||||||||    
T  42926967 tttgtatctctttgtaagaactcattgacagtggattgaagaaataaatctctctctcatagtaggtca-agttggaccgaactgggtaaacatttcttg 42927065  T
Q  192 gtgt 195  Q
    ||||    
T  42927066 gtgt 42927069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 213288 - 213333
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  213288 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 213333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27015351 - 27015396
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27015351 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 27015396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28278135 - 28278180
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  28278135 tgggaaacacatgagtggagagactattgtgagcaacttgggtgag 28278180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40147080 - 40147125
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  40147080 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 40147125  T

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Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 40763200 - 40763273
Alignment:
Q  235 tggttagattgtggttttgttatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttac 307  Q
    |||||| ||| |||||||| ||||||||||||||||||| || ||||||||| ||||| |||||| ||||||||    
T  40763200 tggttaaattatggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttatggtttac 40763273  T

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Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 19806466 - 19806521
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||    
T  19806466 atagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaact 19806521  T

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Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 10700771 - 10700580
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||| ||| |||| | ||||||||||||||  || ||||||||| |||||| | ||||||||||  ||||||| ||| |||||||    
T  10700771 gagcttgttgaagctaatt-cttataac-atttttgtatctctttaaaaagaactcattgatagtgaagtggagagatc--tctctcccccatagtaggt 10700676  T
Q  159 cattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttg 253  Q
    |||||||  ||||||||   | || | ||| || |||||||| ||||||||||||       |||||| |||| ||||| || |||||||||||||    
T  10700675 cattgtttcaccgaactgagtaaataattctttcgtgttgttctcttttctctacgctctttatcttgcttattctttgatttgattgtggttttg 10700580  T

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Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16544499 - 16544568
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  16544499 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 16544568  T

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Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 16546721 - 16546790
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  16546721 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 16546790  T

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Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 14689548 - 14689503
Alignment:
Q  63 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||    
T  14689548 gcttgttgaagctaattttttgtaa-tatttttgtatctctttgtaa 14689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 38746824 - 38746869
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||    
T  38746824 tgggaaacacgtgagtggagagtcatttgcgagcaacttgggtgag 38746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 59 - 324
Target Start/End: Original strand, 7370 - 7637
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  7370 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcctctagagtagg 7468  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    | |  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||||||||||||  |||||||||||| |||    
T  7469 ttaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 7567  T
Q  258 gcacttggtttatagactag---tctatattattgttgttgcttgtggtttactttggttgttggttgcc 324  Q
    ||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  7568 gcacttggtttatagactaggtctatatattattgttgttgcttgtggtttactttggttgttggttgcc 7637  T

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Target: scaffold0466; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 7151 - 7192
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  7151 aaacacatgagtggagagtcttttgtgagcaacttgggtgag 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 1e-75; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 59 - 305
Target Start/End: Original strand, 4283567 - 4283813
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  4283567 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagg 4283665  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||||||||||||  |||||||||||| |||    
T  4283666 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 4283764  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttt 305  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  4283765 gcacttggtttatagactaggtctatattgttgttattgcttgtggttt 4283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 40328822 - 40329064
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40328822 gtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 40328921  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |     |||||| |||||   ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||    
T  40328922 t-----ttggacggaactgagtgaacatttcttggtgttgttatcttttctctactctccttttcttgtttatcctttggttagattgtggttttgctat 40329016  T
Q  258 gcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    ||||||| ||| |||| ||| |||| | | ||||| ||||||||||||    
T  40329017 gcacttgttttctagattagatctagactgttgttattgcttgtggtt 40329064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 324
Target Start/End: Complemental strand, 42435116 - 42434846
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  42435116 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtagg 42435018  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || ||||||||||||| ||    
T  42435017 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttctttatcttgtttattccttgctttggattgtggttttgcta 42434919  T
Q  257 tgcacttggtttatagacta-gtcta--tattattgttgttgcttgtggtttac---tttggttgttggttgcc 324  Q
    ||||||| | |||||||||| |||||  |||| |||||||||||||||||| ||   |||||||||||||||||    
T  42434918 tgcactt-gattatagactaggtctatctattgttgttgttgcttgtggttaacatttttggttgttggttgcc 42434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 18655443 - 18655688
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  18655443 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattagagagatcaatctctcctccaaagtagg 18655541  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggttttgt 254  Q
    |||  ||||||||||||| | ||||||||| |||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||||     
T  18655542 tca-agttggaccgaactgggtgaacattttttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 18655640  T
Q  255 tatgcacttggtttatagactag-tctatattattgttgttgcttgtg 301  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  18655641 tatgcacttggtttatagactagatctatattgttgttattgcttgtg 18655688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 11384028 - 11384273
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||| ||| ||||||||||| ||| |||||||||||||||||||    
T  11384028 gtgagtttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaacccattgatactggattggagacatcgatctctcctccagagtagg 11384126  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    | |  ||||||||||||| | ||||||||| |||||||||| ||| |||||| |||       |||||||||||||||||||||||||||||||||| ||    
T  11384127 tta-agttggaccgaactgggtgaacattttttggtgttgtctat-ttttctttactctctttatcttgtttatcctttggttagattgtggttttgcta 11384224  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  11384225 tgcacttgttttctagattagatctagattgttgttattgcttgtggtt 11384273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 59 - 304
Target Start/End: Original strand, 3772235 - 3772480
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||| || ||||||||||||||||||| |||| |||| |||||||||||| | ||| |||||||||||||||||||||||| ||   |||||||||    
T  3772235 gtgagcttatttaagctaatttcttgtaactcattt-gtatatctttgtaagaatttattgatagtggattggagagatcaatctatctctcagagtagg 3772333  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  |||||||| |||| ||| || ||||||||||| |||||||||||||||||       ||||||||||| |||||||||||||||||||||| |||    
T  3772334 tcaa-gttggaccaaactggataaatatttcttggtggtgttatcttttctctactctctttatcttgtttattctttggttagattgtggttttgctat 3772432  T
Q  258 gcacttggtttatagact-agtctatattattgttgttgcttgtggtt 304  Q
    ||||||| ||| |||| | | |||| ||| ||||||||||||||||||    
T  3772433 gcacttgatttctagattaaatctagattgttgttgttgcttgtggtt 3772480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 264
Target Start/End: Original strand, 40221788 - 40221992
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  40221788 gtgagcttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagattagg 40221886  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | | || | |  |||||||||||||||| ||| |||       |||||||| || |||||||| ||||||||||||| |||    
T  40221887 tca-agttggaccgaactgggtcaataatctttggtgttgttatcttgtctttactctctttatcttgttcattctttggttggattgtggttttgctat 40221985  T
Q  258 gcacttg 264  Q
    |||||||    
T  40221986 gcacttg 40221992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 59 - 264
Target Start/End: Complemental strand, 10930324 - 10930118
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||| ||||||||||||||||||||||  ||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  10930324 gtgagctcgttgaagctaatttcttgtaacccattta-tatctctttgtaagaacacattgatagtggattggagagatcaatctctcccccagattagg 10930226  T
Q  158 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtt 255  Q
    |||  ||||||||||||| | | ||| |||||||||||||||||||||||| | | |       ||||||||||| |||| ||| ||||||||||||| |    
T  10930225 tca-agttggaccgaactgggtcaacaatttcttggtgttgttatcttttcttttgctccctttatcttgtttattcttttgttggattgtggttttgct 10930127  T
Q  256 atgcacttg 264  Q
    |||||||||    
T  10930126 atgcacttg 10930118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 42498237 - 42498362
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||   |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42498237 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 42498335  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  42498336 tcaagtttggaccgaactgggtgaaca 42498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 1292588 - 1292454
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||| || ||||||||| ||||||||||    
T  1292588 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggatttgagaaataaatctctcc-ccagagtagg 1292491  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    |||  ||||||||||||| |   |||||||||||||||    
T  1292490 tca-agttggaccgaactgggcaaacatttcttggtgt 1292454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 30143383 - 30143476
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccaga 152  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  30143383 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaga 30143476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 3303795 - 3303680
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||    
T  3303795 gtgagcttgtttaacctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccacagtagg 3303697  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  3303696 tca-agttggaccgaact 3303680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 15212829 - 15212944
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  15212829 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgataatggattggagagatcaatctctcccccagattagg 15212927  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  15212928 tca-agttggaccgaact 15212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 27811321 - 27811436
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||| ||||    
T  27811321 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaacccattgatagtggattgaagagatcaatctctcccccagattagg 27811419  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  27811420 tca-agttggaccgaact 27811436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 33352193 - 33352308
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  33352193 gtgaacttgttgaacctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 33352291  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  33352292 tca-agttggaccgaact 33352308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 43036466 - 43036581
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||||||| | |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  43036466 gtgaacttgttgaaactaatttcttgtaattcattt-gtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcctccagattagg 43036564  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  43036565 tca-agttggaccgaact 43036581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 19945473 - 19945383
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  19945473 aagctaatttcttgtaaccacttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctcgagagtaggtca 19945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 34256616 - 34256507
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||||    
T  34256616 taatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaa 34256518  T
Q  174 ctagatgaaca 184  Q
    || | ||||||    
T  34256517 ctgggtgaaca 34256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 44303910 - 44304023
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||| |  |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||     
T  44303910 aagctaatttcttgtaa-tccttttgtatctctttttaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggat 44304008  T
Q  170 cgaactagatgaaca 184  Q
    |||||||| ||||||    
T  44304009 cgaactaggtgaaca 44304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 5689314 - 5689429
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  5689314 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttgg 5689412  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  5689413 tca-agttggaccgaact 5689429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 7597659 - 7597774
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||||| |||  |||| |||||||||||||||||||||||||||| ||| |||||||    
T  7597659 gagcttgttgaagctaatttcttataa-tccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggt 7597757  T
Q  159 cattgttggaccgaact 175  Q
    ||||||| |||||||||    
T  7597758 cattgttagaccgaact 7597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 2627792 - 2627895
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctctt-tgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  2627792 ctaatttcttgcaactctttttgtatctcttgtgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 2627891  T
Q  172 aact 175  Q
    ||||    
T  2627892 aact 2627895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 173
Target Start/End: Original strand, 4731701 - 4731814
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| | ||    
T  4731701 gtgagcttgttgaacctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggagagatcgatctctcccccagattcgg 4731799  T
Q  158 tcattgttggaccgaa 173  Q
    |||  |||||||||||    
T  4731800 tca-agttggaccgaa 4731814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 4162545 - 4162652
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 162  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||||| |||||||||||| | |||||||||||      
T  4162545 cttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtca-a 4162641  T
Q  163 gttggaccgaa 173  Q
    |||||||||||    
T  4162642 gttggaccgaa 4162652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 17982712 - 17982821
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    ||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||||    
T  17982712 taatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaa 17982810  T
Q  174 ctagatgaaca 184  Q
    || | ||||||    
T  17982811 ctgggtgaaca 17982821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 18141863 - 18141964
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | |||||||| |||||||||||||| || |||||||||||||||||||||||||||| | ||| ||||    
T  18141863 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatcactttgtaagaactctttgatagtggattggagagatcaatctctcccctagattagg 18141961  T
Q  158 tca 160  Q
    |||    
T  18141962 tca 18141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 31218312 - 31218425
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||   ||||||    
T  31218312 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggac 31218410  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  31218411 cgaactgggtgaaca 31218425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 34254440 - 34254331
Alignment:
Q  75 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    ||||||||||||||   ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||||    
T  34254440 taatttcttgtaaccc-ttttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaa 34254342  T
Q  174 ctagatgaaca 184  Q
    || | ||||||    
T  34254341 ctgggtgaaca 34254331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 195
Target Start/End: Original strand, 10015128 - 10015257
Alignment:
Q  63 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 161  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || ||||||||| |||||||||||||||||| ||||||| ||||| |||||||||     
T  10015128 gcttgttgaagctaatttcttgtaactca-tttgtatctcttt-taggaactcattgatagtggattggagagataaatctct-ctccatagtaggtca- 10015223  T
Q  162 tgttggaccgaactagatgaacatttcttggtgt 195  Q
     ||||||||||||| | | | |||||||||||||    
T  10015224 agttggaccgaactgggtaatcatttcttggtgt 10015257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 12702759 - 12702644
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||    
T  12702759 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtgtctctttgtaagaactcattgatattggattggagagatcaatctctcccctagattagg 12702661  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  12702660 tca-agttggaccgaact 12702644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 40321123 - 40321238
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||| ||||||||||||||  |||  |||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  40321123 gtgagcttgttgaagttaatttcttgtaacccatta-gtatctctttgtaaaaactctttgatagtggattggagagatcaatctctcccccagattagg 40321221  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  40321222 tca-agttggaccgaact 40321238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 30291650 - 30291737
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||||||||| || || ||||||||||||||||||||||||||||    
T  30291650 gtgagcttgttgaagctaatttcttgtaactca-tttgtatcactttgtaagaattctttgatagtggattggagagatcaatctctcc 30291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 19491824 - 19491707
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || ||||||||||  |||||||||| ||||| ||| ||||||    
T  19491824 gtgagcttgttgaaactaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtagg 19491726  T
Q  158 tcattgttggaccgaactag 177  Q
    ||| | ||||||||||||||    
T  19491725 tca-tattggaccgaactag 19491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 1746331 - 1746219
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||   ||||||    
T  1746331 aagctaatttcttgtaaccc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggac 1746234  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  1746233 cgaactgggtgaaca 1746219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 3439558 - 3439671
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   |||||    
T  3439558 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 3439655  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| ||||||||    
T  3439656 ccgaactggatgaaca 3439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 44353836 - 44353923
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    |||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  44353836 gtgaacttgttgaagctaatttcttgtaac-acatttgtatctctttgtaagaactcattgatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 1345496 - 1345379
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| || |||||||||||||||||||||  || | ||||||||||| ||||||||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  1345496 gtgagtttattgaagctaatttcttgtaacccatat-gtatctctttgaaagaactcattgatagtggattgaagagttcaatctctcccccagagtagg 1345398  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  ||| |||||||||||    
T  1345397 tca-agttagaccgaactag 1345379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 8153807 - 8153936
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||||||| ||| |||||||  |||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||  |    
T  8153807 ttgttgaagctaaattcgtgtaactc-ttttgtatatctttgtaagaactcattgatagttgattggagagatcaatctcttcctcagagtaggtca-ag 8153904  T
Q  164 ttggaccgaactagatgaacatttcttggtgt 195  Q
    |||||||||| | ||| || |||| |||||||    
T  8153905 ttggaccgaaatggataaatattttttggtgt 8153936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 18106201 - 18106091
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  18106201 gagcttgttgaagctaatttcttgtaactca-tttgtatct-tttgtaagaactcattgatagt-gtttggagagatcaatctctcc-ccagaataggtc 18106106  T
Q  160 attgttggaccgaact 175  Q
    |  |||||||||||||    
T  18106105 a-agttggaccgaact 18106091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 29796442 - 29796329
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa--ctcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||| |||||||||||| | ||||||| || ||||||| ||  |||||| ||| |||||||||||||||||||||||| |||  ||||||||    
T  29796442 cttgttgaagctgatttcttgtaac-atttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcccccaatgtaggtca 29796344  T
Q  161 ttgttggaccgaact 175  Q
    |||||||||||||||    
T  29796343 ttgttggaccgaact 29796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 32902292 - 32902191
Alignment:
Q  66 tgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 163  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| ||| ||||| |||||| ||| ||||||||||||||||| || |||||||||||||    
T  32902292 tgttgaagctaatttcttgtaactt-ttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattg 32902194  T
Q  164 ttg 166  Q
    |||    
T  32902193 ttg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 41366736 - 41366625
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||| ||||||||||||| ||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||    
T  41366736 agcttgtttaagctaatttcttttaacctattt-gtatccctttgtaagaactcatttatagtggattggagagatcaatctctcc-ctagattaggtca 41366639  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  41366638 -agttggaccgaact 41366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 11712124 - 11711993
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||||||||||||||||||||| |||   |||| |||||||||||||  |||||||| ||||||||||| ||||||||||||||||  || |||||||    
T  11712124 gagcttgttgaagctaatttcttgaaaccc-ttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggt 11712026  T
Q  159 cattgttggaccgaactagatgaacatttcttg 191  Q
    ||||||||| || || | | | |||||||||||    
T  11712025 cattgttggtcctaattgggtaaacatttcttg 11711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 6599017 - 6599130
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    ||||||||| ||||||||||||||||||  |||| ||||   |||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||||    
T  6599017 gagcttgtttaagctaatttcttgtaacccattt-gtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtc 6599115  T
Q  160 attgttggaccgaact 175  Q
    |  |||||||||||||    
T  6599116 a-agttggaccgaact 6599130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 6674470 - 6674583
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 159  Q
    ||||||||| ||||||||||||||||||  |||| ||||   |||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||||    
T  6674470 gagcttgtttaagctaatttcttgtaacccattt-gtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtc 6674568  T
Q  160 attgttggaccgaact 175  Q
    |  |||||||||||||    
T  6674569 a-agttggaccgaact 6674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 3073981 - 3073870
Alignment:
Q  76 aatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaac 174  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||  ||||| ||||||    
T  3073981 aatttcttgtaac-atttttgtatctctttgtaagaactcattgataatggcttggagagatcaatctctcc-ccatagtaggtca-agttgggccgaac 3073885  T
Q  175 tagatgaacatttct 189  Q
    | | | |||||||||    
T  3073884 tgggtaaacatttct 3073870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 4733784 - 4733864
Alignment:
Q  95 tgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||| |||||||  |||||||||||||    
T  4733784 tgtatctctttgtaagaattcattgatagtggattggagagatcgatctctcccccagattaggtca-agttggaccgaact 4733864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 4743296 - 4743224
Alignment:
Q  103 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||    
T  4743296 tttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaact 4743224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 25690009 - 25690122
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 168  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  25690009 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 25690106  T
Q  169 ccgaactagatgaaca 184  Q
    ||||||| | ||||||    
T  25690107 ccgaactgggtgaaca 25690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 2999806 - 2999723
Alignment:
Q  181 aacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttg 264  Q
    ||||||||||| ||||| ||||||||||||||       ||||||||||| |||||||||||||||| ||||| ||||||||||    
T  2999806 aacatttcttgatgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttg 2999723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 9765800 - 9765902
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||| |   ||||||| ||||| ||||||| | ||||||    
T  9765800 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagct-gctctctcccccagattaggtca-tattggac 9765896  T
Q  170 cgaact 175  Q
    ||||||    
T  9765897 cgaact 9765902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 8965815 - 8965701
Alignment:
Q  60 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||| ||||||||| ||||||||| ||||   |||| |||||||||||||||||||||| |||||| || |||||||| ||||||||| ||| | |||||    
T  8965815 tgagtttgttgaagttaatttcttataaccc-ttttatatctctttgtaagaactcattgatagtgcatcggagagataaatctctcccccatattaggt 8965717  T
Q  159 cattgttggaccgaact 175  Q
    ||  |||||||||||||    
T  8965716 ca-agttggaccgaact 8965701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 1822335 - 1822423
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactca-ttatagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||||   |||| ||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  1822335 gtgagcttgttgaagctaatttcttgtaac-ccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1822423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 1856780 - 1856868
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactca-ttatagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||||   |||| ||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  1856780 gtgagcttgttgaagctaatttcttgtaac-ccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 38863961 - 38864017
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    ||||||||||||||||||||||||| ||| || ||||||| |||||| |||||||||    
T  38863961 atagtggattggagagatcaatctcccctgcatagtaggttattgttagaccgaact 38864017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 40328595 - 40328643
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  40328595 ggatgggaaacacatgagtgtagagtcttttgtgagcaacttgggtgag 40328643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 15290614 - 15290683
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  15290614 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 15290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 15470983 - 15471052
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  15470983 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 15471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 42575402 - 42575333
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  42575402 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 42575333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40221564 - 40221609
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  40221564 tgggaaacacatgagtggagagtcttttgtgagcaacttaggtgag 40221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 3231921 - 3231872
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  3231921 gtgagcttgttgaagctaattttttttaac-cattttgtatctctttgtaa 3231872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 10929842 - 10929872
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaact 89  Q
    |||||||||||||||||||||||||||||||    
T  10929842 gtgagcttgttgaagctaatttcttgtaact 10929872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 10929865 - 10929907
Alignment:
Q  94 ttgtatctctttgtaagaactcatt-atagtggattggagaga 135  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  10929865 ttgtaactctttgtaagaactcattgatagtggattggagaga 10929907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 30909413 - 30909487
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagat 136  Q
    ||||||||| || ||||||||||||||||   |||||||||||||||||  |||| || |||||| |||||||||||    
T  30909413 gagcttgtttaaactaatttcttgtaact--ctttgtatctctttgtaatgactcgttgatagtgaattggagagat 30909487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 2999872 - 2999828
Alignment:
Q  15 ggatgggaaacacatgagtggagagtctattgagagcaacttggg 59  Q
    ||||| ||||||||||||| ||||||| |||| ||||||||||||    
T  2999872 ggatgagaaacacatgagtagagagtcaattgtgagcaacttggg 2999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 10240197 - 10240256
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt 118  Q
    |||||||||||||| |||||||||||||||  || ||| |||||||||| |||||||||||    
T  10240197 gtgagcttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcatt 10240256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 10240263 - 10240315
Alignment:
Q  156 ggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 208  Q
    ||||||||||||| | |||||| | ||||||||||||| ||||| ||||||||    
T  10240263 ggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttct 10240315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 59 - 306
Target Start/End: Original strand, 45726972 - 45727217
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45726972 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 45727070  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | ||||||||| || ||||||||||||||||| |||       ||||  ||||| |||||||| ||||||||||||| |||    
T  45727071 tca-agttggaccgaactgggtgaacattttttagtgttgttatcttttctttactctctttatct--tttattctttggttggattgtggttttgctat 45727167  T
Q  258 gcacttggtttatagacta-gtctatattattgttgttgcttgtggttta 306  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  45727168 gcacttagtttatagactaggtctatattattgttgttgcttgtggttta 45727217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 322
Target Start/End: Complemental strand, 35447009 - 35446745
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  35447009 gtgatcttgttgaatctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcactctctcctccagagtagg 35446911  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttat 257  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| ||||||||  |||||||||||| |||    
T  35446910 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgctttggttgaattgtggttttgctat 35446812  T
Q  258 gcacttggtttatagactag---tctatattattgttgttgcttgtggtttactttggttgttggttg 322  Q
    |||||| | |||||||||||   | |||||| |||||||||  |||||||||||||||||||||||||    
T  35446811 gcactt-gattatagactagatctatatattgttgttgttgagtgtggtttactttggttgttggttg 35446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 297
Target Start/End: Original strand, 33648214 - 33648454
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||||||||||||||| ||||||   |||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  33648214 gtgagcttgttgaagctaatttcctgtaaccc-ttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtag 33648312  T
Q  157 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    ||||||||||||||||||| | | ||||||| ||||||||||| ||||||||||||       ||||||||||| |||| |||  |||||| ||||| ||    
T  33648313 gtcattgttggaccgaactgggtaaacatttattggtgttgttgtcttttctctactctctttatcttgtttattctttagtttaattgtgattttgcta 33648412  T
Q  257 tgcacttggtttatagacta-gtctatattattgttgttgct 297  Q
    ||||||||| ||||||| || | ||| ||| |||||||||||    
T  33648413 tgcacttggcttatagattaggcctagattgttgttgttgct 33648454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 304
Target Start/End: Original strand, 7451123 - 7451407
Alignment:
Q  22 aaacacatgagtggagagtctattgagagcaacttgggtgag-cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-a 119  Q
    ||||||||||||||||||||  ||| |||||||||| || || |||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |    
T  7451123 aaacacatgagtggagagtcatttgtgagcaacttgagtaagacttgttgaagctaatttcttgtaattcattt-gtatctctttgtaataactcattga 7451221  T
Q  120 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctcta--cnnnn 216  Q
    |||||||||| |||||||||||||||||| | |||||||||  |||||| |||||| | ||||||||| |||||||||| ||| |||||||||  |        
T  7451222 tagtggattgcagagatcaatctctcctctacagtaggtca-agttgga-cgaactgggtgaacatttattggtgttgtctat-ttttctctactctctc 7451318  T
Q  217 nnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
       ||||||||||| |||||||| |||||||||||||||||||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  7451319 tttatcttgtttattctttggttcgattgtggttttgttatgcacttgttttctagattagatctagattgttgttattgcttgtggtt 7451407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 110 - 307
Target Start/End: Original strand, 17450671 - 17450868
Alignment:
Q  110 gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 208  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||| |||||| |  ||||||||||||||||||||    
T  17450671 gaactcattgatagtggattggagagatcaatctctccac-agagtaggtcaa-gttggaccgaactaggtgaacaatctttggtgttgttatcttttct 17450768  T
Q  209 ctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttatagacta-gtctatattattgttgttgcttgtggtttac 307  Q
     |||       |||||||||||||||||||||||||||||||||| |||||||||||||| |||| || || || ||| ||||||||||||||| |||||    
T  17450769 gtactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttctagattaggtttagattgttgttgttgcttgtgatttac 17450868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 1631857 - 1631710
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||| |||||||||  |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  1631857 gtgagcttgttgaagctaatatcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtagg 1631759  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc 207  Q
    |||  |||||||||||||   |||| ||||||| ||||||||||||||||    
T  1631758 tca-agttggaccgaactgagtgaatatttcttagtgttgttatcttttc 1631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 24398100 - 24398246
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  24398100 gtgagcttgttgaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtag 24398198  T
Q  157 gtcattgttggaccgaactagatgaac-atttcttggtgttgttatct 203  Q
    ||||||||||||||||||| | ||||| ||| ||||||||||||||||    
T  24398199 gtcattgttggaccgaactggctgaacaattacttggtgttgttatct 24398246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 2334543 - 2334427
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2334543 gtgaacttgttgaagctaatttctagtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 2334445  T
Q  158 tcattgttggaccgaact 175  Q
    |||   ||||||||||||    
T  2334444 tcaagtttggaccgaact 2334427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 42288235 - 42287990
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||| |||||||  | ||||||| ||||||||||| |||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  42288235 gtgagcttgttgaagctaatttattgtaaccca-tttgtatttctttgtaagagctcattgataatggattggagagatcaatctctcc-ccagattagg 42288138  T
Q  158 tcattgttggaccgaactagatgaa-catttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgtta 256  Q
    |||  ||||||||||||| | | ||  ||||||||||| ||||||||||||| |||       | ||||||||| | |||||| ||||||||||||  ||    
T  42288137 tca-agttggaccgaactgggtcaataatttcttggtgctgttatcttttctttaccctctttaacttgtttattccttggttggattgtggtttttcta 42288039  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||||||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  42288038 tgcacttgttttctagattagatctagattgttgttattgcttgtggtt 42287990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 36988201 - 36988076
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36988201 gtgagcttgtcaaaactaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 36988103  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||   |||||||||||| | ||||||    
T  36988102 tcaagtttggaccgaactgggtgaaca 36988076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 17490273 - 17490143
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||    
T  17490273 gtgagcttgttgaagctaatttcttgtaact-cttttgtaactctttgtaagaactcattgatagtggattgtagagatcaatctctcccctagagtagg 17490175  T
Q  158 tcattgttggaccgaactagatgaacatttctt 190  Q
    ||| | |||||||||||| | | ||||||||||    
T  17490174 tcaat-ttggaccgaactgggtaaacatttctt 17490143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 17057491 - 17057379
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  17057491 agcttgttgaagctaattttttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17057393  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  17057392 -agttggaccgaact 17057379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 17085474 - 17085362
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  17085474 agcttgttgaagctaattttttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17085376  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  17085375 -agttggaccgaact 17085362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 6595131 - 6595015
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||   ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  6595131 gtgaacttgttgaagctaatttcttgtaaccc-ttttgaatctctttgtaagaactcgttgatagtggattggagagatcaatctctcctccagagtagg 6595033  T
Q  158 tcattgttggaccgaact 175  Q
    |||   ||||||||||||    
T  6595032 tcaagtttggaccgaact 6595015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 36773605 - 36773720
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |    
T  36773605 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattatg 36773703  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  36773704 tca-agttggaccgaact 36773720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 723869 - 723754
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  723869 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 723771  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  723770 tca-agttggaccgaact 723754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 30218168 - 30217956
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||  || ||||| ||||||| ||| | ||||||||| |||| |||||||| ||    
T  30218168 gagcttattgaagctaatttcttgtaacca-ttttgtatctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagt 30218070  T
Q  159 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttgttatg 258  Q
    ||||||||||| ||||| | | ||||||| ||||||| | | | ||||||||||       ||||||||||| |||||||| |||||||||| |||| |     
T  30218069 cattgttggactgaactcggtaaacattttttggtgtagctct-ttttctctactctctttatcttgtttattctttggtttgattgtggttgtgtttta 30217971  T
Q  259 cacttggtttataga 273  Q
    |||||||||| ||||    
T  30217970 cacttggtttctaga 30217956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 33162575 - 33162458
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| | ||| ||||    
T  33162575 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctctgtaagaactcattgatagtggattagagagatcaatctctcccctagattagg 33162477  T
Q  158 tcattgttggaccgaactag 177  Q
    |||  |||||||||||||||    
T  33162476 tca-agttggaccgaactag 33162458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 4503245 - 4503133
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  4503245 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 4503148  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  4503147 cgaactgggtgaaca 4503133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 5723369 - 5723256
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |   ||||||    
T  5723369 aagctaatttcttgtaacct-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggac 5723271  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  5723270 cgaactgggtgaaca 5723256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 45099810 - 45099922
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  45099810 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 45099907  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  45099908 cgaactgggtgaaca 45099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 7815395 - 7815311
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactca-ttatagtggattggagagatcaatctctcc 146  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7815395 agcttgttgaagctaatttcttgtaact-cttttgtatctctttgtaagaactcatttatagtggattggagagattaatctctcc 7815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 36318134 - 36318019
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||||||||||||| ||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||    
T  36318134 gtgagcttgttgaaactaatttattgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccttagagtagg 36318036  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  36318035 tca-agttggaccgaact 36318019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 42362395 - 42362496
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||    
T  42362395 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagattagg 42362493  T
Q  158 tca 160  Q
    |||    
T  42362494 tca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 11067348 - 11067463
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||  ||||||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| ||||    
T  11067348 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcatttataatggattgaagagatcaatctctcccccagattagg 11067446  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  11067447 tca-agttggaccgaact 11067463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 38312283 - 38312398
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| ||||||||| |||||||||||||||  |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| || |    
T  38312283 gtgaacttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagatctcattgatagtggattggagagatcaatctctcccccagattatg 38312381  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  38312382 tca-agttggaccgaact 38312398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 26353227 - 26353341
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||| |||||||||||||||||||||||| | |||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||   ||||||||    
T  26353227 gtgagtttgttgaagctaatttcttgtaac-acttttgtatctttttgtaagtactcattgatagtggattggagagatcactctctcccttagagtagg 26353325  T
Q  158 tcattgttggaccgaac 174  Q
    |||  ||||||||||||    
T  26353326 tca-agttggaccgaac 26353341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 4484444 - 4484354
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  4484444 aagctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 14633951 - 14633835
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| |||| ||||||||||||  |||||||||||||||||||||||||||| ||||| |||    
T  14633951 gtgagcttgtttaagctaatttcttgtaacccattt-gtatcccttttgtaagaactcatagatagtggattggagagatcaatctctcccccagattag 14633853  T
Q  157 gtcattgttggaccgaact 175  Q
    ||||  |||||||||||||    
T  14633852 gtca-agttggaccgaact 14633835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 34139896 - 34139780
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctc-tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 156  Q
    ||||||||||| ||||||||||||||||||  | | |||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||    
T  34139896 gtgagcttgtttaagctaatttcttgtaaccca-tatgtatcccttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattag 34139798  T
Q  157 gtcattgttggaccgaact 175  Q
    ||||  |||||||||||||    
T  34139797 gtca-agttggaccgaact 34139780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 11151716 - 11151601
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||| |  ||||||||||||||||||||| |||||| ||||| ||||    
T  11151716 gtgagcttgtttaagctaatttcttgtaacccattt-gtatcactttgtaagaactcttagatagtggattggagagatcaacctctcccccagattagg 11151618  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  11151617 tca-agttggaccgaact 11151601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 29867924 - 29868027
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  29867924 aagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccaaattaggtca-agttggac 29868021  T
Q  170 cgaact 175  Q
    ||||||    
T  29868022 cgaact 29868027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 28672036 - 28672088
Alignment:
Q  121 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672036 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28672088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 32289621 - 32289732
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||   ||||||||    
T  32289621 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtcaagtttggaccg 32289719  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  32289720 aactgggtgaaca 32289732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 30833404 - 30833490
Alignment:
Q  75 taatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    ||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  30833404 taatttcttgtaaccc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 30833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 42019995 - 42019859
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa---ctcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||| ||   |||||| |||||| ||| ||||||||||||||| | ||| ||||||    
T  42019995 agcttgtagaagctaatttcttgtaactc-ttttgtatctctttgtaaaaaaaactcattgatagtgaatttgagagatcaatctcttccccatagtagg 42019897  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgt 195  Q
    | ||||||||||| || | ||| |||| ||||||||||    
T  42019896 ttattgttggaccaaattggataaacacttcttggtgt 42019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 11049596 - 11049698
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||| ||||   ||| ||||||||||||||||||||||| ||||| ||||| | ||||||||||||||| || | ||||    
T  11049596 gtgagcttgttgaagctaatttcttataacccttttagtatctctttgtaagaactcattgatagtagattgaaaagatcaatctctccttcataatagg 11049695  T
Q  158 tca 160  Q
    |||    
T  11049696 tca 11049698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 36205777 - 36205665
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| | || ||||||||||| ||||||| |||||||||||||||||   ||||||    
T  36205777 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggac 36205680  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  36205679 cgaactgggtgaaca 36205665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 11690544 - 11690668
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||| ||||||||||||||||||  | |||||||| ||||||||||| || || ||||||||||||||||||||| |||||| ||| | || |    
T  11690544 gtgagcttgtttaagctaatttcttgtaaccca-tttgtatccctttgtaagaaatcgttgatagtggattggagagatcaacctctcccccatattacg 11690642  T
Q  158 tcattgttggaccgaactagatgaaca 184  Q
    |||  ||||||||||||| ||| ||||    
T  11690643 tca-agttggaccgaactggatcaaca 11690668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 13121812 - 13121901
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctcca 150  Q
    ||||||||||||||| ||||||||||||||    ||||||||||||||||  |||||||| ||||||||||| ||| ||||||||||||||||    
T  13121812 gtgagcttgttgaagataatttcttgtaac---ctttgtatctctttgtagaaactcattgatagtggattgaagaaatcaatctctcctcca 13121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 6266749 - 6266859
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  6266749 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 6266846  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  6266847 aactgggtgaaca 6266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 13656146 - 13656041
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctc-tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 167  Q
    ||||||||||||||||||   | ||||||| | ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  13656146 aagctaatttcttgtaac--ctcttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 13656049  T
Q  168 accgaact 175  Q
    ||||||||    
T  13656048 accgaact 13656041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 12647464 - 12647386
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  12647464 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 12647386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 1632081 - 1632036
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1632081 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 1632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 35447233 - 35447188
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  35447233 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 35447188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 39284930 - 39284994
Alignment:
Q  111 aactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||    
T  39284930 aactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaact 39284994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 42288459 - 42288414
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  42288459 tgggaaacacatgagtggagagtcttttgtgagcaacttgggtgag 42288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 7597131 - 7597020
Alignment:
Q  64 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 161  Q
    ||||| ||| |||||||||||||| |  |||||||||| ||||||| ||||||||| || || ||  |||||||||  |||||||| |||||||||||||    
T  7597131 cttgtcgaaactaatttcttgtaagtc-ttttgtatctttttgtaaagaactcattgattgtagaacggagagatc--tctctccttcagagtaggtcat 7597035  T
Q  162 tgttggaccgaacta 176  Q
    |||| ||||||||||    
T  7597034 tgttagaccgaacta 7597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 14202530 - 14202450
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 146  Q
    ||||||||||| ||||||||||||||||||| ||         ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14202530 gtgagcttgtttaagctaatttcttgtaactcatc--------ctttgtaagaactcattgatagtagattggagagatcaatctctcc 14202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 42261609 - 42261524
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctc 145  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||| |||||| |  |||||||||| ||||||    
T  42261609 gagcttgttgaagctaatttcttgtaact-cttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctc 42261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 42412121 - 42412161
Alignment:
Q  119 atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  42412121 atagtggattggagagatcaatctctcc-ccagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 4561137 - 4561180
Alignment:
Q  65 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 109  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  4561137 ttgttgaagctaatttcttgtaac-atttttgtatctctttgtaa 4561180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 34811345 - 34811295
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa 112  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||    
T  34811345 gagcttgttgaagctaatttattgtaact-cttttatatctctttgtaagaa 34811295  T

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Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45726750 - 45726793
Alignment:
Q  20 ggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||    
T  45726750 ggaaacacatgagtggagagtcatttgtgagcaacttgggtgag 45726793  T

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Target: scaffold0176 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 304
Target Start/End: Complemental strand, 18128 - 17882
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  18128 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaa-aactcattgatagtggattggagagatcaatctctcctccagggtagg 18031  T
Q  158 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggttttgtta 256  Q
    |||   ||||| |||||| | |||||||||||||||||||||||||||||| |||       |||||||||| |||||||||||||||||||||||| ||    
T  18030 tcaagtttggatcgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattcctttggttagattgtggttttgcta 17931  T
Q  257 tgcacttggtttatagactag-tctatattattgttgttgcttgtggtt 304  Q
    |||| ||| ||| |||| ||| |||| ||| ||||| ||||||||||||    
T  17930 tgcatttgttttctagattagatctagattgttgttattgcttgtggtt 17882  T

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Target: scaffold0236 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 304
Target Start/End: Original strand, 10546 - 10778
Alignment:
Q  73 gctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||| ||||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  10546 gctaatttattgtaacca-ttttgtatctctttgtaagaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccg 10643  T
Q  172 aactagatgaacatttcttggtgttgttatcttttctctac-nnnnnnnatcttgtttatcctttggttagattgtggttttgttatgcacttggtttat 270  Q
    |||| | | ||||||||||||||||||||||||| ||||||        ||||||||||| ||||| ||||||||| |||||  ||| |||||| ||| |    
T  10644 aactgggtaaacatttcttggtgttgttatctttcctctactctcttttatcttgtttattctttgattagattgtagttttactatacacttgatttct 10743  T
Q  271 agact-agtctatattattgttgttgcttgtggtt 304  Q
    ||| | | |||| ||| ||||||||||||||||||    
T  10744 agattaaatctagattgttgttgttgcttgtggtt 10778  T

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Target: scaffold0219 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 27566 - 27439
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 158  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||  |||| ||| |||||||||||||||||||||||||||| ||| |||||||    
T  27566 gagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggt 27468  T
Q  159 cattgttggaccgaactagatgaacattt 187  Q
    ||||||||||||||| ||| | |||||||    
T  27467 cattgttggaccgaattaggtaaacattt 27439  T

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Target: scaffold0286 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 11612 - 11725
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  11612 aagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 11710  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  11711 cgaactgggtgaaca 11725  T

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Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 11377 - 11422
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||||    
T  11377 tgggaaacacatgagtggagagtcatttctgagcaacttgggtgag 11422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 114657 - 114770
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |   || |||    
T  114657 aagctaatttcttgtaacgc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagac 114755  T
Q  170 cgaactagatgaaca 184  Q
    |||||| ||||||||    
T  114756 cgaactggatgaaca 114770  T

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Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 434588 - 434701
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  434588 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 434686  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  434687 cgaactgggtgaaca 434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 490444 - 490359
Alignment:
Q  61 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctc 145  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||| |||||| |  |||||||||| ||||||    
T  490444 gagcttgttgaagctaatttcttgtaact-cttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctc 490359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 149219 - 149107
Alignment:
Q  62 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 160  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  149219 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 149121  T
Q  161 ttgttggaccgaact 175  Q
      |||||||||||||    
T  149120 -agttggaccgaact 149107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 20540 - 20425
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 157  Q
    |||| |||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||| ||||    
T  20540 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatattggattggagagatcaatctctcccccagattagg 20442  T
Q  158 tcattgttggaccgaact 175  Q
    |||  |||||||||||||    
T  20441 tca-agttggaccgaact 20425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 971 - 1083
Alignment:
Q  71 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 169  Q
    ||||||||||||||||||   ||||||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  971 aagctaatttcttgtaaccc-ttttgtatctctttg-aacaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 1068  T
Q  170 cgaactagatgaaca 184  Q
    |||||| | ||||||    
T  1069 cgaactgggtgaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 8846 - 8735
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   |||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  8846 ctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 8748  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  8747 aactgggtgaaca 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 11272 - 11161
Alignment:
Q  74 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 171  Q
    |||||||||||||||   |||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  11272 ctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 11174  T
Q  172 aactagatgaaca 184  Q
    |||| | ||||||    
T  11173 aactgggtgaaca 11161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 3804 - 3735
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  3804 aagaactcatttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaact 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 2682 - 2604
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  2682 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 80408 - 80351
Alignment:
Q  59 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcat 117  Q
    |||||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||    
T  80408 gtgagcttgttgaagctaatttcttgcaaccca-tttgtatctttttgtaagaactcat 80351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 80632 - 80587
Alignment:
Q  18 tgggaaacacatgagtggagagtctattgagagcaacttgggtgag 63  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  80632 tgggaaacacatgagcggagagtcttttgtgagcaacttgggtgag 80587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 6363 - 6432
Alignment:
Q  108 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 175  Q
    |||||||||||  ||||||||||||||||  ||| |||||||||||||||||| |   ||||||||||||    
T  6363 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggttaagtttggaccgaact 6432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 7025 - 6981
Alignment:
Q  140 tctctcctccagagtaggtcattgttggaccgaactagatgaaca 184  Q
    ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  7025 tctctcctctagagtaggtcattattggaccgaactggataaaca 6981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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