View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5265_low_66 (Length: 250)

Name: NF5265_low_66
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5265_low_66
NF5265_low_66
[»] chr5 (25 HSPs)
chr5 (1-247)||(6809996-6810228)
chr5 (1-248)||(17153000-17153239)
chr5 (92-248)||(35583948-35584103)
chr5 (91-218)||(18451986-18452113)
chr5 (13-67)||(28569052-28569106)
chr5 (91-247)||(40187757-40187913)
chr5 (91-160)||(12457436-12457505)
chr5 (85-182)||(16311388-16311484)
chr5 (26-247)||(38972754-38972967)
chr5 (9-68)||(4920829-4920888)
chr5 (9-67)||(20973523-20973581)
chr5 (92-242)||(29664808-29664958)
chr5 (92-224)||(27900503-27900633)
chr5 (23-67)||(6092559-6092603)
chr5 (91-247)||(7350508-7350664)
chr5 (9-68)||(5908715-5908774)
chr5 (92-150)||(457474-457532)
chr5 (91-176)||(8020518-8020603)
chr5 (202-247)||(16311486-16311531)
chr5 (23-67)||(2985151-2985195)
chr5 (9-65)||(4583125-4583181)
chr5 (36-68)||(10127084-10127116)
chr5 (12-68)||(12712587-12712643)
chr5 (9-65)||(15890213-15890268)
chr5 (12-68)||(23045021-23045077)
[»] chr4 (56 HSPs)
chr4 (80-240)||(7334275-7334433)
chr4 (1-226)||(21956833-21957049)
chr4 (91-242)||(33616216-33616367)
chr4 (9-247)||(25298860-25299089)
chr4 (91-231)||(8843905-8844045)
chr4 (91-231)||(8856869-8857009)
chr4 (9-226)||(42907746-42907954)
chr4 (91-238)||(25265248-25265394)
chr4 (95-183)||(12505635-12505723)
chr4 (91-247)||(17113104-17113259)
chr4 (71-234)||(30034525-30034688)
chr4 (91-211)||(21714076-21714196)
chr4 (93-226)||(37926420-37926551)
chr4 (9-247)||(25940978-25941206)
chr4 (91-248)||(36918961-36919117)
chr4 (91-247)||(36306623-36306779)
chr4 (9-68)||(5902641-5902700)
chr4 (9-68)||(6382299-6382358)
chr4 (9-68)||(7608979-7609038)
chr4 (9-68)||(44317544-44317603)
chr4 (9-215)||(33516099-33516298)
chr4 (12-68)||(18423599-18423655)
chr4 (12-68)||(29527821-29527877)
chr4 (12-68)||(47103747-47103803)
chr4 (91-226)||(9280990-9281125)
chr4 (9-68)||(11028082-11028141)
chr4 (9-68)||(11122896-11122955)
chr4 (1-68)||(15987281-15987348)
chr4 (9-68)||(47550380-47550439)
chr4 (111-201)||(39086040-39086130)
chr4 (102-168)||(53906791-53906857)
chr4 (12-68)||(14605955-14606011)
chr4 (12-68)||(21544588-21544644)
chr4 (12-68)||(30266360-30266416)
chr4 (12-68)||(30285772-30285828)
chr4 (1-65)||(47239404-47239468)
chr4 (9-65)||(48459493-48459549)
chr4 (9-68)||(1724337-1724396)
chr4 (9-64)||(3737789-3737844)
chr4 (93-168)||(4741318-4741393)
chr4 (1-68)||(16575121-16575188)
chr4 (1-68)||(19883075-19883142)
chr4 (143-226)||(24474967-24475050)
chr4 (13-68)||(26564840-26564895)
chr4 (9-68)||(32585498-32585557)
chr4 (9-68)||(55826650-55826709)
chr4 (93-155)||(37384203-37384265)
chr4 (15-68)||(10574452-10574505)
chr4 (189-242)||(40420774-40420827)
chr4 (12-68)||(1866579-1866635)
chr4 (198-242)||(4652603-4652647)
chr4 (36-68)||(28695196-28695228)
chr4 (9-65)||(31752468-31752524)
chr4 (12-68)||(31782622-31782678)
chr4 (16-68)||(35304550-35304602)
chr4 (91-135)||(40420686-40420730)
[»] chr1 (33 HSPs)
chr1 (71-228)||(8880300-8880457)
chr1 (91-242)||(13692482-13692634)
chr1 (1-214)||(39219124-39219329)
chr1 (1-68)||(48125701-48125768)
chr1 (186-247)||(14902973-14903034)
chr1 (91-247)||(42729044-42729200)
chr1 (92-218)||(16903383-16903503)
chr1 (16-247)||(41476985-41477208)
chr1 (186-247)||(14890995-14891056)
chr1 (12-68)||(16237333-16237389)
chr1 (91-223)||(36421623-36421755)
chr1 (9-68)||(28297938-28297997)
chr1 (23-68)||(23058470-23058515)
chr1 (80-240)||(5293499-5293659)
chr1 (12-68)||(29936420-29936476)
chr1 (25-68)||(9982932-9982975)
chr1 (9-68)||(23490797-23490856)
chr1 (9-68)||(24236787-24236846)
chr1 (9-68)||(34611077-34611136)
chr1 (9-68)||(36187246-36187305)
chr1 (91-164)||(5283693-5283766)
chr1 (91-146)||(33293620-33293675)
chr1 (9-68)||(34673308-34673367)
chr1 (9-68)||(51421862-51421921)
chr1 (2-68)||(10450078-10450144)
chr1 (2-68)||(16903527-16903593)
chr1 (111-248)||(45460163-45460301)
chr1 (9-62)||(3628011-3628064)
chr1 (9-62)||(19572538-19572591)
chr1 (1-65)||(17091977-17092041)
chr1 (93-173)||(23719510-23719590)
chr1 (92-160)||(43513130-43513198)
chr1 (36-68)||(49741060-49741092)
[»] chr6 (24 HSPs)
chr6 (91-247)||(9402421-9402577)
chr6 (113-248)||(34346136-34346271)
chr6 (71-240)||(2126701-2126870)
chr6 (82-242)||(1947882-1948042)
chr6 (9-240)||(20348904-20349126)
chr6 (9-67)||(28079722-28079780)
chr6 (9-63)||(32959868-32959922)
chr6 (9-68)||(14410881-14410940)
chr6 (9-68)||(32853847-32853906)
chr6 (9-68)||(2367329-2367388)
chr6 (9-68)||(3483949-3484008)
chr6 (9-68)||(27534687-27534746)
chr6 (9-68)||(5863409-5863468)
chr6 (9-68)||(12141388-12141447)
chr6 (9-68)||(12309575-12309634)
chr6 (91-226)||(14321722-14321855)
chr6 (9-68)||(24225701-24225760)
chr6 (194-248)||(29340751-29340805)
chr6 (91-148)||(13769003-13769060)
chr6 (9-62)||(32532549-32532602)
chr6 (9-65)||(8320821-8320877)
chr6 (12-68)||(10142547-10142603)
chr6 (36-68)||(10188126-10188158)
chr6 (12-68)||(29199914-29199970)
[»] chr8 (23 HSPs)
chr8 (16-240)||(29918446-29918662)
chr8 (91-248)||(6388605-6388762)
chr8 (9-247)||(28345323-28345553)
chr8 (92-226)||(36274896-36275029)
chr8 (9-226)||(8545375-8545584)
chr8 (1-218)||(17084125-17084336)
chr8 (91-212)||(30903911-30904034)
chr8 (71-247)||(5700188-5700364)
chr8 (92-164)||(17108291-17108363)
chr8 (9-68)||(32303064-32303123)
chr8 (111-175)||(5793489-5793553)
chr8 (9-68)||(17469258-17469317)
chr8 (9-68)||(24927952-24928011)
chr8 (189-248)||(29416376-29416435)
chr8 (27-68)||(30481465-30481506)
chr8 (1-65)||(29108840-29108904)
chr8 (14-65)||(2075864-2075915)
chr8 (9-68)||(14186323-14186382)
chr8 (9-68)||(20399595-20399654)
chr8 (9-67)||(34777070-34777128)
chr8 (23-68)||(1012622-1012667)
chr8 (9-62)||(27932422-27932475)
chr8 (9-61)||(45236075-45236127)
[»] chr7 (36 HSPs)
chr7 (23-248)||(3773905-3774122)
chr7 (99-247)||(43550524-43550671)
chr7 (71-226)||(11472793-11472947)
chr7 (85-242)||(4101383-4101541)
chr7 (92-226)||(31345384-31345518)
chr7 (12-68)||(32546200-32546256)
chr7 (9-65)||(10072477-10072533)
chr7 (120-226)||(6557855-6557961)
chr7 (9-67)||(30650640-30650698)
chr7 (107-240)||(23533721-23533854)
chr7 (9-68)||(16866177-16866236)
chr7 (9-68)||(18125254-18125313)
chr7 (9-68)||(18825898-18825957)
chr7 (9-64)||(21702671-21702726)
chr7 (9-68)||(35074478-35074537)
chr7 (91-241)||(3156926-3157076)
chr7 (190-240)||(37217848-37217898)
chr7 (9-63)||(45885791-45885845)
chr7 (92-240)||(19440112-19440260)
chr7 (12-68)||(27063146-27063202)
chr7 (12-68)||(45380115-45380171)
chr7 (9-68)||(12980385-12980444)
chr7 (9-68)||(17851862-17851921)
chr7 (9-68)||(27850352-27850411)
chr7 (91-150)||(29292636-29292695)
chr7 (9-68)||(44794054-44794112)
chr7 (9-67)||(5377094-5377152)
chr7 (9-62)||(3226972-3227025)
chr7 (9-62)||(33841092-33841145)
chr7 (23-68)||(43218291-43218336)
chr7 (4-68)||(2630594-2630658)
chr7 (1-65)||(17885476-17885540)
chr7 (12-68)||(18683982-18684038)
chr7 (12-68)||(22973396-22973452)
chr7 (92-240)||(23475365-23475513)
chr7 (12-68)||(44845164-44845220)
[»] chr2 (28 HSPs)
chr2 (92-247)||(29656836-29656992)
chr2 (4-248)||(25210209-25210445)
chr2 (91-242)||(34214757-34214907)
chr2 (91-162)||(13531867-13531938)
chr2 (9-247)||(35248411-35248637)
chr2 (96-240)||(31600873-31601017)
chr2 (91-214)||(13954611-13954734)
chr2 (91-214)||(14095818-14095941)
chr2 (9-68)||(30846950-30847009)
chr2 (9-68)||(36128132-36128191)
chr2 (1-68)||(38342537-38342604)
chr2 (1-68)||(18485652-18485719)
chr2 (9-68)||(24414158-24414217)
chr2 (1-68)||(43371557-43371624)
chr2 (1-156)||(30696848-30696995)
chr2 (113-247)||(35409274-35409408)
chr2 (12-68)||(3547170-3547226)
chr2 (80-167)||(34320535-34320623)
chr2 (9-68)||(8915963-8916022)
chr2 (9-68)||(9632390-9632449)
chr2 (9-64)||(37106700-37106755)
chr2 (11-68)||(4961479-4961536)
chr2 (23-68)||(14331531-14331576)
chr2 (12-68)||(30978931-30978985)
chr2 (115-176)||(40734707-40734768)
chr2 (1-65)||(7314666-7314730)
chr2 (16-68)||(11959019-11959071)
chr2 (92-155)||(17845493-17845556)
[»] chr3 (30 HSPs)
chr3 (96-242)||(27252405-27252550)
chr3 (91-215)||(37032198-37032320)
chr3 (91-226)||(772894-773028)
chr3 (9-152)||(30904842-30904976)
chr3 (91-226)||(3414633-3414768)
chr3 (9-68)||(23546968-23547027)
chr3 (9-68)||(44639277-44639336)
chr3 (9-67)||(4557331-4557389)
chr3 (9-62)||(23154090-23154143)
chr3 (9-68)||(7469804-7469863)
chr3 (9-68)||(29284339-29284398)
chr3 (9-68)||(44172629-44172688)
chr3 (9-68)||(44179329-44179388)
chr3 (9-68)||(44953461-44953520)
chr3 (9-68)||(49580067-49580126)
chr3 (9-68)||(52198158-52198217)
chr3 (188-226)||(40890217-40890255)
chr3 (1-62)||(29842317-29842378)
chr3 (9-65)||(34154420-34154476)
chr3 (9-68)||(3385882-3385941)
chr3 (9-68)||(39655299-39655358)
chr3 (9-68)||(44252750-44252809)
chr3 (9-68)||(48305667-48305726)
chr3 (93-155)||(27937663-27937725)
chr3 (1-67)||(34119660-34119726)
chr3 (2-68)||(53631907-53631973)
chr3 (23-68)||(54317147-54317192)
chr3 (9-65)||(23580833-23580889)
chr3 (12-68)||(39728674-39728730)
chr3 (9-65)||(48390843-48390899)
[»] scaffold0157 (1 HSPs)
scaffold0157 (95-183)||(14754-14842)
[»] scaffold1322 (1 HSPs)
scaffold1322 (91-247)||(944-1099)
[»] scaffold0244 (1 HSPs)
scaffold0244 (91-242)||(4680-4831)
[»] scaffold0059 (1 HSPs)
scaffold0059 (12-68)||(70098-70154)
[»] scaffold0013 (2 HSPs)
scaffold0013 (12-68)||(105498-105554)
scaffold0013 (12-68)||(128150-128206)
[»] scaffold0036 (1 HSPs)
scaffold0036 (9-68)||(33396-33455)
[»] scaffold0005 (1 HSPs)
scaffold0005 (12-68)||(211367-211423)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 6810228 - 6809996
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaat 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||| ||||||||||||||||    
T  6810228 gattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccatacccaaac--------ccatcccgaatggtgaaaatcaat 6810137  T
Q  101 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||  | ||||||||||||| |||||||||||||||    
T  6810136 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaa------tctcggtatttcagttgacccttatttatcatagttc 6810043  T
Q  201 tctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6810042 tctcttttctccttccatgtctcacaatttcggcctctctcttctcc 6809996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17153239 - 17153000
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaat 100  Q
    ||||||| |||| |||||||| |||| |||| | |||||| ||||||| ||| |||||||||||||||        || |||| ||||  ||||||||||    
T  17153239 gattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaacccatacccaaac--------ccgtcccgaatgtagaaaatcaat 17153148  T
Q  101 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttc 200  Q
    ||||| |||||| || || |||||||| ||||| | ||||| |||||||||||||| ||| |  |||| |||||||  |||     | ||||||||||||    
T  17153147 ttattaccccttctagataaatagaaatccaaaacctaaataatttcactcacacagtcagatactcagtctttcaaatgagattcacttatcatagttc 17153048  T
Q  201 tctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    ||| |||||| ||||||| ||||||| | ||| ||||||||| |||||    
T  17153047 tctattttcttcttccatatctcacactctcgccctctctcttctcct 17153000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 35584103 - 35583948
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||||| ||| |||||||| ||||||||| |||||| ||||| ||||  |||||||| ||| ||||||| |||||||| || | |  |||||    
T  35584103 aaaatcaatttattaccc-ttttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtcactcattta 35584005  T
Q  192 tcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||  ||||||| |||||||||| ||| || |||| | ||||| |||| || |||||    
T  35584004 tcactgttctctgttttctcctttcatatcccacactctcggcatctcccttctcct 35583948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 18451986 - 18452113
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||||||||||||  ||||||||||| ||||||||  | || |||| || |||||||||||||| | ||||||||  |||||||| |||     | ||    
T  18451986 gaaaatcaatttattatcccttttatattaatagaaatacgaatcttagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcactt 18452085  T
Q  191 atcatagttctctcttttctccttccat 218  Q
    ||||| ||||||||||||||||||||||    
T  18452086 atcatggttctctcttttctccttccat 18452113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 28569052 - 28569106
Alignment:
Q  13 cgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  28569052 cgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 40187757 - 40187913
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| || ||||||||| ||||| ||   ||| | ||||| |||| ||||||| | ||| ||| ||| |||||||| |||| |  | ||    
T  40187757 gaaaattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcactt 40187856  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||||||||| |||| |||||| ||||||| | |||| |||||||| ||||    
T  40187857 atcatagttctctcttatctcattccatatctcacactctcggtctctctcttctcc 40187913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 12457505 - 12457436
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatca 160  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||   ||||| ||||||||||||||||||    
T  12457505 gaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacacaatca 12457436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 16311388 - 16311484
Alignment:
Q  85 aatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgac 182  Q
    |||| ||||||||||||||||  ||||||||||| |||||||| ||||||| ||||| |||| |||| || | ||  ||||||| |||||||||||||    
T  16311388 aatgttgaaaatcaatttattatcccttttatataaatagaaa-ccaaaccctaaatcattttactcgcagagtctcagtctcagtctttcagttgac 16311484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 38972967 - 38972754
Alignment:
Q  26 ggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaataga 125  Q
    ||||||| | |||||||||| |||||||||||||||| |||||        ||||| ||||||   ||||||||||||||  ||||||||||| ||| ||    
T  38972967 ggtaacgggaatataggtacccaccccgaacccatactcaaac--------ccatctcaaatgcataaaatcaatttattaacccttttatataaatcga 38972876  T
Q  126 aacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcac 225  Q
    |||  ||||| ||||| |||| | ||||||  | | ||||| | |||||||  |||| |  | |||||||||||||||||| ||||||| ||| | ||||    
T  38972875 aactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatcatagttctctcttatctcctttcatatatcac 38972776  T
Q  226 aatttcggcctctctctgctcc 247  Q
    | | || | |||||||| ||||    
T  38972775 actctctgtctctctcttctcc 38972754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 4920888 - 4920829
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||  ||||||||||||||||||||||    
T  4920888 aacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaac 4920829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 20973523 - 20973581
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||||||||| || | |||||||| | |||||||||| |||||||||||||||||||||    
T  20973523 aacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 242
Target Start/End: Complemental strand, 29664958 - 29664808
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||| | |||||||||| | ||||||||| |||||  ||||| |||||| | |||   ||| ||||||| | |||||| |||| |  | |||    
T  29664958 aaaatcaatttactaccccttttatttaaatagaaactcaaactctaaatcatttcatttacattgtcagagtctcagtatttcagatgacactcactta 29664859  T
Q  192 tcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    ||||| |||||||||||||| ||| || ||| ||| | | |||||||||||    
T  29664858 tcataattctctcttttctctttcaatatctaacactcttggcctctctct 29664808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 27900503 - 27900633
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||||| || ||||||||| |||||||||  ||||| ||||| |||||| ||||||| ||  ||  ||| |||||||| |||| |  | |||    
T  27900503 aaaatcaatttatttcctcttttatataaatagaaactgaaaccctaaatcatttcagtcacacattc--agaatcagtctttcagatgacactcactta 27900600  T
Q  192 tcatagttctctcttttctccttccatgtctca 224  Q
      ||||||||||||| ||||||| ||| |||||    
T  27900601 atatagttctctcttatctccttacatatctca 27900633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 6092559 - 6092603
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||||||||| | |||||||||| |||||||||||||||||||||    
T  6092559 acgggtaacgggtatataggtacccaccccgaacccatacccaaa 6092603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 7350508 - 7350664
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| ||||||||  | ||||||||| ||||| || | ||||| ||||| |||| ||||||| | | | |||| || ||||| ||  ||| |  | ||    
T  7350508 gaaaattaatttattatcgcttttatataaatagtaatcgaaaccctaaatcattttactcacatagttagagtcgcaatctttgagacgacgctcactt 7350607  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||||||||| ||||||||||| ||||||| | ||| || |||||| ||||    
T  7350608 atcatagttctctcttatctccttccatatctcacattctcgacccctctcttctcc 7350664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 5908715 - 5908774
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||| |||| |||||| |||||||||||||||    
T  5908715 aacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccatacccaaac 5908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 457474 - 457532
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcact 150  Q
    |||||||||||||| | |||||||||| |||||||||| ||| | ||||| ||||||||    
T  457474 aaaatcaatttattacaccttttatataaatagaaaccaaaatcctaaatcatttcact 457532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 8020603 - 8020518
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttca 176  Q
    ||||||||||||| | |||||||||||| ||   ||||| ||||| ||||| ||| |||||| ||| ||| ||||||| |||||||    
T  8020603 gaaaatcaatttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtctcagtctttca 8020518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 16311486 - 16311531
Alignment:
Q  202 ctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    ||||||||||||||||| ||||||||| ||| ||||||||| ||||    
T  16311486 ctcttttctccttccatatctcacaatctcgacctctctcttctcc 16311531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 2985195 - 2985151
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||||||||| | ||||||||||||| |||||| |||||||||||    
T  2985195 acgggtaacgggtatataggtactcatcccgaaaccatacccaaa 2985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 4583181 - 4583125
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||| || |||||||||| | |||||||| | |||||| ||||||||||||    
T  4583181 aacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccataccca 4583125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 10127116 - 10127084
Alignment:
Q  36 atataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||||||||||||||||||    
T  10127116 atataggtacccaccccgaacccatacccaaac 10127084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 12712587 - 12712643
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||| |||||  |||||| |||| |||| |||||||||||||||||    
T  12712587 acgggtacgggacggataacggagatatatgtacccacctcgaacccatacccaaac 12712643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 15890268 - 15890213
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||| || |||||||||| | |||||||||| ||||| |||||||||||||    
T  15890268 aacacgggtatgggacgggtaacgggtatataggtacccaccc-gaacccataccca 15890213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 23045021 - 23045077
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| | ||||||||  |||||| |||| ||||||||||||||||| ||||    
T  23045021 acgggtacgggatgggtaacggagatatatgtacccaccccgaacccataccaaaac 23045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 80 - 240
Target Start/End: Original strand, 7334275 - 7334433
Alignment:
Q  80 tcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagtt 179  Q
    ||||||||| ||||||||||||||||  |  |||||||  ||||||||| |||||  ||||| |||||||||||||| | ||||||||| ||||| ||||    
T  7334275 tcccaaatgttgaaaatcaatttattatcgtttttata--aatagaaactcaaactctaaatcatttcactcacacagttaaagtctcagtcttttagtt 7334372  T
Q  180 gacccatatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    |||   ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  7334373 gacatttatttatcataattctctcttttctccttccatatctcacaatctcggcctctct 7334433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21956833 - 21957049
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaat 100  Q
    ||||||| ||||||||||||||| | |||||| |||||||||| | ||||||||||||||||||||||         | |  | ||||  ||||||||||    
T  21956833 gattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaact--------cgttacgaatgtagaaaatcaat 21956924  T
Q  101 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttc 200  Q
    ||||| ||| |||||||| |||| ||||||||||| ||||| |||||| || |||| ||| ||| ||| ||||| || |||| |  |||||||||||||     
T  21956925 ttattaccc-ttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatcatagtta 21957023  T
Q  201 tctcttttctccttccatgtctcaca 226  Q
    | |||||||||||||||| |||||||    
T  21957024 tatcttttctccttccatatctcaca 21957049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 33616216 - 33616367
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| |||||||||||| |||| ||| | ||||| ||||| |||||||||||||| ||| ||||| | | |||||  |||| |  | ||    
T  33616216 gaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatgacactcactt 33616315  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||||| |||||    
T  33616316 atcatagttctctcttttctccatccatatctcacactctcggcctttctct 33616367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 25298860 - 25299089
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||||||||| | |||||| | |||||||| |   ||||||||||||||||||||||        || | ||||||| |||||||||||||||  ||    
T  25298860 aacacgggtacgggatgggtaatggggatatagctgtccaccccgaacccatacccaaac--------ccgtaccaaatgttgaaaatcaatttatcacc 25298951  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    |||||| ||| ||||||| | |||||  ||||| |||||||||| |   | | |||| || ||||||||||||| | ||||||||||| || ||||||||    
T  25298952 ccttttttataaatagaa-ctcaaactctaaatcatttcactcataacgttagagtcgcaatctttcagttgacacttatttatcataattttctctttt 25299050  T
Q  209 ctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||| ||||||||| ||| | ||||||| ||||    
T  25299051 ctccttccatatctcacaatctcgacttctctcttctcc 25299089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 8843905 - 8844045
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| ||||||| |||| |||||||||  ||| | ||||| |||||||||||||| ||| ||||| |  ||||||| |||| |  | ||    
T  8843905 gaaaattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcactt 8844004  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttc 231  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  8844005 atcatagttctctcttttctccttccatgcctcacactttc 8844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 8856869 - 8857009
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| ||||||| |||| |||||||||  ||| | ||||| |||||||||||||| ||| ||||| |  ||||||| |||| |  | ||    
T  8856869 gaaaattaatttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcactt 8856968  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttc 231  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  8856969 atcatagttctctcttttctccttccatgcctcacactttc 8857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 42907954 - 42907746
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||| ||||| ||| |||| | |||||||||||| |||||||| |||||||||||||         | |||| ||||  ||||||||||||| | |     
T  42907954 aacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaact--------cgtcccgaatgtagaaaatcaatttactact 42907863  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    | |||||||| ||||||||| |||||| ||||| |||||||||| ||| | | ||||| | |||||||| |||| || | ||||||||||||| ||||||    
T  42907862 c-ttttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcatagttctatctttt 42907764  T
Q  209 ctccttccatgtctcaca 226  Q
    |||||||||| |||||||    
T  42907763 ctccttccatatctcaca 42907746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 238
Target Start/End: Original strand, 25265248 - 25265394
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||||||||||||  || || ||||| ||||||||| ||||   ||||| |||| ||||||||||||| ||||||| | |||||| ||||      ||    
T  25265248 gaaaatcaatttattatcc-ttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtctcaatttttcagatgacagtcgctt 25265346  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctct 238  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  25265347 atcatagttctctcttttctccttccatatctcacactttcggcctct 25265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 183
Target Start/End: Original strand, 12505635 - 12505723
Alignment:
Q  95 atcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacc 183  Q
    ||||||||||| |||||||||||| |||||||||  |||| |||||| |||||| || |||||||||||||||| |||||||| |||||    
T  12505635 atcaatttatttccccttttatataaatagaaacttaaacattaaatcatttcattcgcacaatcaaagtctcagtctttcagatgacc 12505723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 17113104 - 17113259
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| | | ||| |||| |||| ||||||||| ||||||| ||||||||| || | ||| ||||||| |||||||| |||| |  | ||    
T  17113104 gaaaatcaatttattactc-tttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgacactcactt 17113202  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    ||||||||| |||||||| ||||||||| ||||||| | || ||| |||||| ||||    
T  17113203 atcatagttatctcttttttccttccatatctcacactctcagcccctctcttctcc 17113259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 30034688 - 30034525
Alignment:
Q  71 ccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcatt 170  Q
    |||||||| || | |||| | |||||||||||| | || | ||||||| |||||||||||||||| ||||| |||||||||| | | | | |||| || |    
T  30034688 ccaaatccgtctcgaatgttaaaaatcaatttactacctcatttatataaatagaaacccaaaccctaaatcatttcactcataaagtgagagtcacaat 30034589  T
Q  171 ctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcacaatttcggc 234  Q
    ||||||  |||| |    ||||||||||| |||||||||||||||||| ||||||| |||||||    
T  30034588 ctttcaagtgacactcgcttatcatagttttctcttttctccttccatatctcacactttcggc 30034525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 21714076 - 21714196
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| || ||||||||| ||||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||| |||  |||| |  | ||    
T  21714076 gaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcacttacacaattagagtctcagtctctcaaatgacactcactt 21714175  T
Q  191 atcatagttctctcttttctc 211  Q
     ||||||||||||||||||||    
T  21714176 ctcatagttctctcttttctc 21714196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 226
Target Start/End: Complemental strand, 37926551 - 37926420
Alignment:
Q  93 aaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttat 192  Q
    |||| ||||||||  |||||| |||||||| ||||| ||||| |||||| |||| ||||||||| | ||||||||| ||||| |  ||||    | ||||    
T  37926551 aaattaatttattatccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagttaaagtctcagtctttga--tgacagtcacttat 37926454  T
Q  193 catagttctctcttttctccttccatgtctcaca 226  Q
    ||||||||||| |||||||||||||| |||||||    
T  37926453 catagttctctattttctccttccatatctcaca 37926420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 25941206 - 25940978
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||||||||| || ||||||| | | |||||||| ||||||||||||||||||||||      ||   || |  |||  ||||||||||||||  ||    
T  25941206 aacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaac------at--gtctcggatgtagaaaatcaatttataacc 25941115  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    |||||||||| |||||||||||||  | ||||| | ||||||||||| |||| ||||| | |||||||| ||||    | ||||||||||  ||| ||||    
T  25941114 ccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatcatagt--tctatttt 25941017  T
Q  209 ctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||  ||| ||| | ||||| ||||||| ||||    
T  25941016 ctccttccaaatcttacactctcggcttctctcttctcc 25940978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 36919117 - 36918961
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||||| |||||| || ||||||||| ||||||||| |||||  ||||| |||||||||||||| | | |||||||  ||||||| ||||    | ||    
T  36919117 gaaaatcagtttattaccacttttatataaatagaaactcaaactctaaatcatttcactcacacagt-agagtctcagactttcagatgacatccactt 36919019  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
     ||||| |||||| |||||||||| ||||  ||||| | ||||||||||||| |||||    
T  36919018 gtcatatttctcttttttctccttacatgcgtcacactctcggcctctctcttctcct 36918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 36306779 - 36306623
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| |||||||||||| |||||||| | ||| | ||||| |||||||| ||||||| | ||||||| ||||| || |||| |    ||    
T  36306779 gaaaatcaatttattaccccttttatataaatagaaatcgaaatcataaatcatttcacttacacaattagagtctcagtctttgagatgacactcggtt 36306680  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||| ||  ||||| |||| |||| | ||| ||| | ||||||||||||| ||||    
T  36306679 atcatatttaactcttatctctttccttatctaacactctcggcctctctcttctcc 36306623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 5902641 - 5902700
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  5902641 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 5902700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 6382299 - 6382358
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  6382299 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 6382358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 7609038 - 7608979
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  7609038 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 7608979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 44317603 - 44317544
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  44317603 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 44317544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 33516099 - 33516298
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||||||||  | |||||||  ||||||| |||| ||||||||||| ||||||||||        || || ||||||   ||||||||| |||| ||    
T  33516099 aacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaac--------ccgtctcaaatgtaaaaaatcaatgtattacc 33516190  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcaca-caatcaaagtctcattctttcagttgacccatatttatcatagttctctcttt 207  Q
    |||||||||| |||| |||| |||||| ||||| |||||||||||| |  | | |||||   |||||||| |||| |  | |||||||| ||||||||||    
T  33516191 ccttttatataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttt 33516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 18423655 - 18423599
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||| ||||| |||||||||||||||||| ||||||| |||||||||||||| ||||    
T  18423655 acggatacgggacgggtaacgaggatatatgtactcatcccgaacccatacctaaac 18423599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29527877 - 29527821
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||  |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  29527877 acgggtacgtgacgggtaacggggatatatgtacccaccccgaacccatacccaaac 29527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 47103803 - 47103747
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||||||  ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  47103803 acgggtacggggcgggtaacgcggatatatgtacccaccccgaacccatacccaaac 47103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 9280990 - 9281125
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| ||||||||  |||||||||||  |||||||  |||||| ||||| ||| || | ||| ||| | ||||||| |||||||| | ||    | ||    
T  9280990 gaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatcattacattgacaaaattagagtctcaatctttcagataacattcactt 9281089  T
Q  191 atcatagttctctcttttctccttccatgtctcaca 226  Q
    |||||||| ||||||||||||||||||| |||||||    
T  9281090 atcatagtactctcttttctccttccatatctcaca 9281125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 11028141 - 11028082
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||| |||||||||||    
T  11028141 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaac 11028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 11122896 - 11122955
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||||||||| |||||    
T  11122896 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaac 11122955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15987281 - 15987348
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| |||||||||| || | |||||||| | |||||| ||| ||||||||||||||||||||||    
T  15987281 gattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaacccatacccaaac 15987348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 47550380 - 47550439
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||  | |||||||||| ||||||||||||||||||||||    
T  47550380 aacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaac 47550439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 39086130 - 39086040
Alignment:
Q  111 ttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttct 201  Q
    |||||||| |||||||||  ||||| ||||| |||||||||||||| ||| | ||||| | |||||| |||| | || |||||||||||||    
T  39086130 ttttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacacttacttatcatagttct 39086040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 53906791 - 53906857
Alignment:
Q  102 tattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctca 168  Q
    |||| |||||||||||| |||||||| | ||||||||| | |||||||||||| | |||||||||||    
T  53906791 tattaccccttttatataaatagaaatcgaaaccttaagttatttcactcacatagtcaaagtctca 53906857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 14605955 - 14606011
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||  |||||||||  ||||||| |||| ||||||||||||||||||||||    
T  14605955 acgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaac 14606011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 21544644 - 21544588
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||||| | ||||||| |||| ||||||||||||||||||||||    
T  21544644 acgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaac 21544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 30266360 - 30266416
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||| | |||||||||| ||||||| |||  ||||||||||||||||||||||    
T  30266360 acgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaac 30266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30285828 - 30285772
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||| | |||||||||| ||||||| |||  ||||||||||||||||||||||    
T  30285828 acgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaac 30285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47239404 - 47239468
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||||| |||||||||| || |||||||||| | |||||||| | ||||| |||||||||||||    
T  47239404 gattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccataccca 47239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 48459549 - 48459493
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||| ||||| ||||||||||||  | |||||||||| |||||||||||||||||||    
T  48459549 aacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccataccca 48459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 1724337 - 1724396
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||| ||||| || ||||||||||   |||||||||| ||||||||||||||||||||||    
T  1724337 aacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaac 1724396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 3737844 - 3737789
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccc 64  Q
    |||||||||| || ||||||||||||| |||| |||| || |||||||||||||||    
T  3737844 aacacgggtatgggacgggtaacgaggttatatgtacccatcccgaacccataccc 3737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 4741318 - 4741393
Alignment:
Q  93 aaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctca 168  Q
    |||||||||||||  || |||||||| ||||||||| |||||| |||||  || | |||||||||||| |||||||    
T  4741318 aaatcaatttattatccattttatataaatagaaactcaaaccctaaatcgttcctctcacacaatcatagtctca 4741393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16575188 - 16575121
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| ||| ||||||||| | || ||||||||||||| |||| ||| ||||||| ||||||||||    
T  16575188 gattttaaaacgcgggtacgggatggataacgaggatataagtacccactccgaacctatacccaaac 16575121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19883075 - 19883142
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| ||||||| ||||| | |||||||| |||||||||||  ||||||||||| |||| |||||    
T  19883075 gattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaac 19883142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 24474967 - 24475050
Alignment:
Q  143 atttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcaca 226  Q
    |||||||||| ||||||||||||||| |||||||| |||| |  | || ||  |||||||||| |||||||||||  |||||||    
T  24474967 atttcactcatacaatcaaagtctcagtctttcagatgacactcacttctctaagttctctctcttctccttccacatctcaca 24475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26564895 - 26564840
Alignment:
Q  13 cgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| || |||||||||| | |||||||||| ||||||||| ||||||||||||    
T  26564895 cgggtatgggacgggtaacgggtatataggtacccaccccgaaaccatacccaaac 26564840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 32585557 - 32585498
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || || ||||||| | |||||||||| ||||| ||||||||||||||||    
T  32585557 aacacgggtatgggacaggtaacgggtatataggtacccaccctgaacccatacccaaac 32585498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 55826650 - 55826709
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||| |||| || |||||||||| | |||||||||| ||||||||||||||| ||||||    
T  55826650 aacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatatccaaac 55826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 37384265 - 37384203
Alignment:
Q  93 aaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacac 155  Q
    |||||||||||||  ||||||||||| |||||||   |||||| ||||| |||||||||||||    
T  37384265 aaatcaatttattatcccttttatataaatagaagttcaaaccctaaatcatttcactcacac 37384203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 10574452 - 10574505
Alignment:
Q  15 ggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| |||||||||| ||||||| |||| | |||||||| |||||||||||    
T  10574452 ggtacgggacgggtaacggggatatatgtacccgccccgaactcatacccaaac 10574505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 40420774 - 40420827
Alignment:
Q  189 ttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    |||||||| || |||||||||||||||||| ||||||| | | |||||||||||    
T  40420774 ttatcatacttttctcttttctccttccatatctcacattcttggcctctctct 40420827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 1866579 - 1866635
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||  |||||||| | ||||||| |||  ||||||||||||||||||||||    
T  1866579 acgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaac 1866635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 4652647 - 4652603
Alignment:
Q  198 ttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    ||||||||||||||||| ||| ||||||| | |||||||||||||    
T  4652647 ttctctcttttctccttgcatatctcacactctcggcctctctct 4652603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 28695196 - 28695228
Alignment:
Q  36 atataggtactcaccccgaacccatacccaaac 68  Q
    ||||||||||||||||||||| |||||||||||    
T  28695196 atataggtactcaccccgaactcatacccaaac 28695228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 31752524 - 31752468
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||| |  ||| |||||||| |||||||| | |||||||||||||||||||    
T  31752524 aacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccataccca 31752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31782678 - 31782622
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||||||| ||||||| |||| |||||| ||| |||||||||||    
T  31782678 acgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaac 31782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 35304550 - 35304602
Alignment:
Q  16 gtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| |||||||||| ||||||||||||  ||||| ||| |||||||||||    
T  35304550 gtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaac 35304602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 40420686 - 40420730
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaacc 135  Q
    |||||||| |||||| |||||||||||| |||||||||| |||||    
T  40420686 gaaaatcactttattaccccttttatataaatagaaaccaaaacc 40420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 8880457 - 8880300
Alignment:
Q  71 ccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcatt 170  Q
    ||||| || ||||||||| | ||||| |||||||| |||||||| ||| ||||||||| ||||| |||||| |||||||||||| | | | |||| || |    
T  8880457 ccaaacccgtcccaaatgctaaaaataaatttattaccccttttttataaatagaaactcaaactttaaatcatttcactcacaaagttagagtcgcagt 8880358  T
Q  171 ctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcacaat 228  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
T  8880357 ctttcagttgacacttatttatcataattctctcttttctccttccatatctcacaat 8880300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 13692634 - 13692482
Alignment:
Q  91 gaaaatcaattt-attgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatt 189  Q
    |||||||||||| |||  ||||||||||| |||||||||| ||||| ||||| ||||||| |||||||| | ||||| | ||||||||  ||| |  | |    
T  13692634 gaaaatcaattttattatcccttttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgacactcact 13692535  T
Q  190 tatcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    ||| ||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  13692534 tattatagttctctcttttctccttccatatctcacactctcggcctctctct 13692482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 39219329 - 39219124
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaat 100  Q
    ||||||| ||||||||||||||||  |||||| ||||| | |||| ||||||||||||||||||||||         | | | |||||  |||||| |||    
T  39219329 gattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaact--------cgttctaaatgtagaaaattaat 39219238  T
Q  101 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttc 200  Q
    ||||| || ||||||||| ||||||||| |||||| ||||| ||||| |||||||| ||| ||||||||| |||||  |||| |  | |||||||||||     
T  39219237 ttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctcacacagtcacagtctcattttttcatatgacactcacttatcatagtta 39219138  T
Q  201 tctcttttctcctt 214  Q
    |||| |||||||||    
T  39219137 tctcctttctcctt 39219124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48125701 - 48125768
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  48125701 gattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaac 48125768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 14903034 - 14902973
Alignment:
Q  186 tatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  14903034 tatttatcatagttctctcttttctccttccatatctcacaatctcggcctctctcttctcc 14902973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 42729044 - 42729200
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||   ||||||||||| |||||||||  | ||  ||||| |||||||||||||| ||| ||||||| |||||||| | || |  | ||    
T  42729044 gaaaataaatttatcatcccttttatataaatagaaacttatacactaaatcatttcactcacacagtcagagtctcagtctttcagataacacccactt 42729143  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||||||||| ||||||||||| | ||||| | |||| |||||||| ||||    
T  42729144 atcatagttctctcttgtctccttccatatatcacactctcggtctctctcttctcc 42729200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 16903503 - 16903383
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||||||||| |||||||| |||| |||| |||||| ||||| |||||||||||||||||| ||| ||| ||      |||||    | |||    
T  16903503 aaaatcaatttattgccctttttatataaatataaactcaaaccctaaattatttcactcacacaatcagagtttcagtc------ttgacaatcactta 16903410  T
Q  192 tcatagttctctcttttctccttccat 218  Q
    |||||||||||||||||||||||||||    
T  16903409 tcatagttctctcttttctccttccat 16903383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 41476985 - 41477208
Alignment:
Q  16 gtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcccctttta 115  Q
    |||||| |||| ||||| ||||||| |||| ||||||||| ||||||||||||        || |||| || |  |||||||||||| || ||| |||||    
T  41476985 gtacgggacggataacgtggatatatgtacccaccccgaatccatacccaaac--------ccgtcccgaaagcagaaaatcaatttgttacccttttta 41477076  T
Q  116 tatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttc 215  Q
    ||| || |||||   ||||| ||||| |||||| ||||||| ||||||||||  |||||||| |||| |  | |||||||| |||||| || || ||||     
T  41477077 tataaagagaaatggaaaccctaaattatttcattcacacagtcaaagtctccgtctttcagatgacacccacttatcataattctcttttatccccttt 41477176  T
Q  216 catgtctcacaatttcggcctctctctgctcc 247  Q
    ||| | ||||| | ||||||||||||| ||||    
T  41477177 catatttcacactctcggcctctctcttctcc 41477208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 14891056 - 14890995
Alignment:
Q  186 tatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||    
T  14891056 tatttataatagttctctcttttctccttccatatctcacaatctcgacctctctcttctcc 14890995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 16237333 - 16237389
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||||||||||||||||| ||||| |||||||||||||||||||||    
T  16237333 acgggtaagggacgggtaacgaggatatatgtactaaccccgaacccatacccaaac 16237389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 36421755 - 36421623
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||||||||||||  |||| |||||| |||| |||| | |||  ||||| |||||| ||||||| ||| ||||||| |||||||| || |    | ||    
T  36421755 gaaaatcaatttattatccctcttatataaataaaaactcgaactctaaatcatttcattcacacagtcagagtctcaatctttcagatggcaatcactt 36421656  T
Q  191 atcatagttctctcttttctccttccatgtctc 223  Q
    |||||||||||||||||||||||| ||| ||||    
T  36421655 atcatagttctctcttttctcctttcatatctc 36421623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 28297997 - 28297938
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  28297997 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 28297938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 23058515 - 23058470
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  23058515 acgggtaacggggatataggtacccaccccgaacccatacccaaac 23058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 240
Target Start/End: Original strand, 5293499 - 5293659
Alignment:
Q  80 tcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagtt 179  Q
    |||| |||| ||||| ||||||||||  | ||||||||| ||||||||| |||||   |||  |||||| |||||||  || |||||||  |||||  ||    
T  5293499 tcccgaatgttgaaagtcaatttattatcacttttatataaatagaaactcaaactcaaaactatttcaatcacacagccagagtctcagactttcgatt 5293598  T
Q  180 gacccatatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    |||  | | |||| ||||||||||||||| || |||||| ||||||||| ||| |||||||    
T  5293599 gacagacacttatgatagttctctcttttttcattccatatctcacaatctcgacctctct 5293659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29936476 - 29936420
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  29936476 acgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 29936420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 9982932 - 9982975
Alignment:
Q  25 gggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  9982932 gggtaacgagtatataggtacccaccccgaacccatacccaaac 9982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 23490797 - 23490856
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||| ||||    
T  23490797 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccaaaac 23490856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24236787 - 24236846
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||| |||| | |||||||||| |||||||||||||||| |||||    
T  24236787 aacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaac 24236846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 34611136 - 34611077
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||  |||||| | |||||||||||||||||||||||||||||||||    
T  34611136 aacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaac 34611077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 36187246 - 36187305
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||| ||||||||||||||||    
T  36187246 aacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaac 36187305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 5283693 - 5283766
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagt 164  Q
    ||||||||||||||   ||||||| ||| ||||| ||| ||||| |||||| ||||| ||||||||||||||||    
T  5283693 gaaaatcaatttatcatcccttttgtataaataggaactcaaactttaaatcatttctctcacacaatcaaagt 5283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 33293620 - 33293675
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgattt 146  Q
    ||||||||||||| | ||| |||||||||||||||||| |||||| ||||| ||||    
T  33293620 gaaaatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 34673308 - 34673367
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |  || ||||||| | |||||||||| ||||||||||||||||||||||    
T  34673308 aacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaac 34673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 51421921 - 51421862
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||  | ||||| |||| ||||||||||||||||||||||    
T  51421921 aacacgggtatgggacgggtaacatgtatatatgtacccaccccgaacccatacccaaac 51421862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 10450078 - 10450144
Alignment:
Q  2 attttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| || ||||||||||  ||||||||  ||||||| |||| |||||||||| |||||||||||    
T  10450078 attttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaac 10450144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 16903593 - 16903527
Alignment:
Q  2 attttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| |||||| |||||| |  ||||| | |||||||||||| |||||||||| |||||||||||    
T  16903593 attttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaac 16903527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 248
Target Start/End: Original strand, 45460163 - 45460301
Alignment:
Q  111 ttttatatcaatagaaacccaaacct-taaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttc 209  Q
    |||||||| |||||||||  |||||  ||||| |||||||||||||||||  ||| ||| |||||||| |||| |  | ||||| || || |||||||||    
T  45460163 ttttatataaatagaaacataaacccctaaatcatttcactcacacaatcgcagtttcaatctttcagatgacactcacttatcgtaattttctcttttc 45460262  T
Q  210 tccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||||   | ||||||| | ||| ||||||||| |||||    
T  45460263 tccttatgtatctcacactctcgacctctctcttctcct 45460301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3628011 - 3628064
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || |||||||||| | || ||||||| ||||||||||||||||    
T  3628011 aacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19572538 - 19572591
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || || ||||||| | |||||||||| ||||||||||||||||    
T  19572538 aacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatac 19572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17091977 - 17092041
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||||| ||||| |||| || ||| |||||| | ||||||| ||||||||||||||||| ||||    
T  17091977 gattttataacacaggtatgggacgcgtaacgggtatataggcactcaccccgaacccatgccca 17092041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 23719590 - 23719510
Alignment:
Q  93 aaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctt 173  Q
    ||||||||||| | ||| |||||||| ||||||||| |||||  ||||| |||||||| ||||| ||  ||||||| ||||    
T  23719590 aaatcaatttactaccctttttatataaatagaaactcaaactataaatcatttcactaacacagtctgagtctcagtctt 23719510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 43513130 - 43513198
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatca 160  Q
    |||||||||||||  | | |||||||| ||||||||| |||||| ||||| |||||||||  |||||||    
T  43513130 aaaatcaatttataactctttttatataaatagaaactcaaaccctaaataatttcactcgtacaatca 43513198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 49741060 - 49741092
Alignment:
Q  36 atataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||||||||||||||||||    
T  49741060 atataggtacccaccccgaacccatacccaaac 49741092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 9402577 - 9402421
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||| | |||| ||||||| |||||||||||||||| ||||| |||||||||||||| ||| |||||   |||||||  | || |  | ||    
T  9402577 gaaaatcaatttagtaccccatttatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctaggtctttcatatcacactcactt 9402478  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  9402477 atcatagttctctcttttctccttccatatctcacattttcggcctctctcttctcc 9402421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 34346136 - 34346271
Alignment:
Q  113 ttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctcc 212  Q
    |||||| |||||||||||||||| ||||| |||||||||||||| ||| ||||||| ||||| || |||     | ||||||||||||| |||||||| |    
T  34346136 ttatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtcacttatcatagttctatcttttcttc 34346235  T
Q  213 ttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||||| ||||||| | ||||||||| ||| |||||    
T  34346236 ttccatatctcacattctcggcctctttcttctcct 34346271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 240
Target Start/End: Original strand, 2126701 - 2126870
Alignment:
Q  71 ccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcatt 170  Q
    ||||||||||| | ||||  |||||| | |||||| ||||||||||||  |||||||| ||| | |||||| |||||||| ||| | | ||||||||  |    
T  2126701 ccaaatccatctcgaatgaagaaaataagtttattaccccttttatatagatagaaactcaagctttaaatcatttcacttacagagttaaagtctcggt 2126800  T
Q  171 ctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
     ||| || | || |  | |||||||||||||||||||||||||||||| ||||||| | | |||||||||    
T  2126801 attttagatcacactcagttatcatagttctctcttttctccttccatatctcacactcttggcctctct 2126870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 1947882 - 1948042
Alignment:
Q  82 ccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttga 181  Q
    |||||||  ||||||||||||||| |||||||||||| |||| ||| ||||||| ||| | |||  ||||||||| ||| ||| ||   ||||||| |||    
T  1947882 ccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaagtcattatactcacacagtcagagtatctgactttcagatga 1947981  T
Q  182 cccatatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    | |  | |||||||||||| ||||||||| ||| ||| ||||||||| | | |||||||||    
T  1947982 cactcacttatcatagttccctcttttctactttcatatctcacaatcttgacctctctct 1948042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 20349126 - 20348904
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    |||||||||| || ||| |||||| |||||||||||| |||||||||| ||||||||||        ||| |  ||||||   ||||| |||||||| |     
T  20349126 aacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaa--------tccgttgcaaatgtaaaaaattaatttattaca 20349035  T
Q  109 ccttttatatcaa-tagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttt 207  Q
    | |||||||| || || |||| |||||| ||||| | |||||||||||  ||| |||||    ||||||| |||| | || |||||||||||||||||||    
T  20349034 ctttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttatcatagttctctcttt 20348937  T
Q  208 tctccttccatgtctcacaatttcggcctctct 240  Q
    ||||||||||| ||||||| |||  ||||||||    
T  20348936 tctccttccatatctcacactttttgcctctct 20348904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 28079722 - 28079780
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  28079722 aacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 32959922 - 32959868
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacc 63  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  32959922 aacacgggtacggaacgggtaacggggatataggtatccaccccgaacccatacc 32959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 14410881 - 14410940
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  14410881 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 14410940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 32853906 - 32853847
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  32853906 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 32853847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 2367388 - 2367329
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||| |||| ||||||||||||||||||||||    
T  2367388 aacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 2367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 3483949 - 3484008
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || | |||||||| | |||||||||| ||||||||||||||||||||||    
T  3483949 aacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaac 3484008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 27534746 - 27534687
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||| ||||||||||||    
T  27534746 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaatccatacccaaac 27534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 5863409 - 5863468
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||| ||| |||| |||||||||||||||||    
T  5863409 aacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaac 5863468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 12141447 - 12141388
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || || |||||| ||| | |||||||||| ||||||||||||||||||||||    
T  12141447 aacacggatatgggacgggtgacgggtatataggtacccaccccgaacccatacccaaac 12141388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 12309634 - 12309575
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||||||||  | ||||| |||| ||||||||||| ||||||||||    
T  12309634 aacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaac 12309575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 226
Target Start/End: Complemental strand, 14321855 - 14321722
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| ||  |||||||| ||||||||| |||| ||||||| |||||||||||   | ||||||||| |||||| || ||||    | ||    
T  14321855 gaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactcacgtga-caaagtctcgttctttaagatgacaatcactt 14321757  T
Q  191 atcatagttctctcttttctccttccatgtctcaca 226  Q
    |||||| |||||| |||||||||| ||| |||||||    
T  14321756 atcataattctct-ttttctcctttcatatctcaca 14321722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 24225760 - 24225701
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || || |||||||||| | |||||||||| |||||||||||||| |||||||    
T  24225760 aacacggatatgggacgggtaacgggtatataggtacccaccccgaacccatgcccaaac 24225701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 29340805 - 29340751
Alignment:
Q  194 atagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||||||||||||||||||||| || ||||||| | ||||||||| ||| |||||    
T  29340805 atagttctctcttttctccttcgatatctcacactctcggcctctttcttctcct 29340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 13769060 - 13769003
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttca 148  Q
    ||||||||||||||| | |||||||||| ||| ||||| |||||| ||||| ||||||    
T  13769060 gaaaatcaatttattactccttttatataaattgaaactcaaaccataaattatttca 13769003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 32532602 - 32532549
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || |||||||| | | |||||||||| ||||||||||||||||    
T  32532602 aacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatac 32532549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 8320821 - 8320877
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||||||||| ||||||  |||||||| ||   ||||||||||||||||||    
T  8320821 aacacgggtacggaacaggtaacagggatatagatatcgaccccgaacccataccca 8320877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 10142547 - 10142603
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || || ||||||| | |||||||||| |||||||||| |||||||||||    
T  10142547 acgggtatgggacaggtaacgggtatataggtacccaccccgaactcatacccaaac 10142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 10188126 - 10188158
Alignment:
Q  36 atataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||||||||||||||||||    
T  10188126 atataggtacccaccccgaacccatacccaaac 10188158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 29199914 - 29199970
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||  ||||||| |||   |||||||||||||||||||||    
T  29199914 acgggtacgggacgggtaacagggatatatgtatctaccccgaacccatacccaaac 29199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 29918662 - 29918446
Alignment:
Q  16 gtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcccctttta 115  Q
    |||| ||||||||||| | |||||| |||| ||||||||| |||||| |||||        || |||||||||   |||||||||||||| || ||||||    
T  29918662 gtacagaacgggtaacaaagatatatgtacccaccccgaaaccatacacaaac--------ccgtcccaaatgtaaaaaatcaatttattacctctttta 29918571  T
Q  116 tatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttc 215  Q
    ||| ||||||||| |||||| ||||| |||||||||||||| | | ||||||| |||||||| |||| | || ||||||||||||| ||||||| |||||    
T  29918570 tataaatagaaactcaaaccctaaatcatttcactcacacagttagagtctcaatctttcagatgacacttagttatcatagttctatcttttcgccttc 29918471  T
Q  216 catgtctcacaatttcggcctctct 240  Q
    ||| ||| ||| | ||| |||||||    
T  29918470 catatcttacactctcgacctctct 29918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 6388605 - 6388762
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| ||| |||||||| || ||||||||||||| ||||| |||||||||||||||| | |||||||  |||| |  |||| |  | ||    
T  6388605 gaaaatcaatttattacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtctcagactttaaaatgacactcactt 6388704  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||||||||||||  |||||||||||||| |||||| | ||||||||||||| |||||    
T  6388705 atcatagttctcttctttctccttccatgcctcacactctcggcctctctcttctcct 6388762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 28345553 - 28345323
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||||||| | | |||||||||||||||||| || ||||||||||||||||||||||           |||  ||||  |||||| ||| |||| ||    
T  28345553 aacacgggtacaggatgggtaacgaggatataggcacccaccccgaacccatacccaaacttg--------tcctgaatgtagaaaataaatatattacc 28345462  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    |||||||||| |||||||||| |||   ||||| |||||||||||||| ||| ||||||| | |||||| |||| |  | |||||||||||||||||| |    
T  28345461 ccttttatataaatagaaaccgaaattctaaatcatttcactcacacagtcatagtctcagtatttcagatgacactcacttatcatagttctctcttat 28345362  T
Q  209 ctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||| ||||||| ||| | ||||||||| ||||    
T  28345361 ctccttccatatctcacacttttgacctctctcttctcc 28345323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 36275029 - 36274896
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||| |  ||||||||||| ||||||||||||| ||| |||| |||||||||||||| ||||||||||  |||||||| |||| |  | |||    
T  36275029 aaaatcaatttactatcccttttatataaatagaaacccaaccct-aaatcatttcactcacacagtcaaagtctcggtctttcagatgacactcactta 36274931  T
Q  192 tcatagttctctcttttctccttccatgtctcaca 226  Q
    ||||||| ||| ||||||||||||||| |||||||    
T  36274930 tcatagtcctcccttttctccttccatatctcaca 36274896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 8545375 - 8545584
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    |||||||||| |||||| |||||| |||||||| ||| |||||||||||||||| |||||         | |||||||||  |||||||||||||   |     
T  8545375 aacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaac--------tcgtcccaaatgtagaaaatcaatttacaact 8545466  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    |||||||||| || ||||| ||||||| ||||| |||||||||| | |  || ||||||  |||||||  |||| |  | |||||||| |||||||||||    
T  8545467 ccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatcataattctctctttt 8545566  T
Q  209 ctccttccatgtctcaca 226  Q
    |||||||||| |||||||    
T  8545567 ctccttccatatctcaca 8545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17084125 - 17084336
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaa--tca 98  Q
    ||||||| ||||||||||||  |||||||||| |||||||| ||| |||||||||| |||| ||||||        ||||| | ||||   ||||  |||    
T  17084125 gattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaac--------ccatcacgaatgtaaaaaaaatca 17084216  T
Q  99 atttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagt 198  Q
    |||||||| || |||||||| |||| |||||||| || ||||| ||| | |||||||||||| ||| ||| |||||||  ||||    | ||||||||||    
T  17084217 atttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaatcagagtttcagtctttcatatgacaatcacttatcatagt 17084316  T
Q  199 tctctcttttctccttccat 218  Q
    | ||||||||||||||||||    
T  17084317 tatctcttttctccttccat 17084336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 30904034 - 30903911
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatc-aaagtctc-attctttcagttgacccatat 188  Q
    ||||||||||||||| | | |||||||| |||||||||| ||||||||||| |||||||||||||| || |||||||| ||| |||||  ||||    ||    
T  30904034 gaaaatcaatttattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtcaaaagtctcaattttttcaaatgacattcat 30903935  T
Q  189 ttatcatagttctctcttttctcc 212  Q
    ||||||||||| ||||||||||||    
T  30903934 ttatcatagttttctcttttctcc 30903911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 5700364 - 5700188
Alignment:
Q  71 ccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcatt 170  Q
    ||||||||||||| ||||   ||||| ||||| || |||||||||||| ||| |||||| ||||  ||||| ||||||||| || | ||| ||||| | |    
T  5700364 ccaaatccatcccgaatgtataaaattaattttttaccccttttatataaattgaaaccgaaactctaaatcatttcactcccatagtcagagtcttagt 5700265  T
Q  171 ctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||| || ||||    | |||||||| ||||||||| ||||||| ||| ||||||| | || |||||||||| ||||    
T  5700264 cttttagatgacagtcacttatcataattctctcttatctcctttcatatctcacactatctgcctctctcttctcc 5700188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 17108363 - 17108291
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagt 164  Q
    ||||||||||||||  || |||||||| |||||||||  ||||| ||||| ||||||||||||||||||||||    
T  17108363 aaaatcaatttattatccattttatataaatagaaacttaaaccctaaataatttcactcacacaatcaaagt 17108291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 32303123 - 32303064
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  32303123 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 32303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 5793553 - 5793489
Alignment:
Q  111 ttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttc 175  Q
    |||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||||| | ||||||    
T  5793553 ttttatataaatagaaactcaaaccctaaatcatttcactcacacaaccaaagtctaagtctttc 5793489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 17469317 - 17469258
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||| |||||||||||||||    
T  17469317 aacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaac 17469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 24928011 - 24927952
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |  |||||||||| | |||||||||| ||||||||||||||||||||||    
T  24928011 aacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaac 24927952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 29416376 - 29416435
Alignment:
Q  189 ttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||| |||||| |||||    
T  29416376 ttatcatagttttctcttttctcctttcatgtctcacacttttggcccctctcttctcct 29416435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 30481465 - 30481506
Alignment:
Q  27 gtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  30481465 gtaatgaggatataggtacccaccccgaacccatacccaaac 30481506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29108840 - 29108904
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||||| |||| ||||| || |||||||||| | ||||| |||| |||||||||||||||||||    
T  29108840 gattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccataccca 29108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 2075915 - 2075864
Alignment:
Q  14 gggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||| || |||||||||| | |||||||||| |||||||||||||||||||    
T  2075915 gggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 2075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 14186382 - 14186323
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || | ||||||||   |||||||||||||||| ||||||||||||||||    
T  14186382 aacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaac 14186323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 20399654 - 20399595
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||| ||| |||||||||||||| |||||||    
T  20399654 aacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaac 20399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 34777128 - 34777070
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||||||||| |||||| |||||  | || ||||||| |||||||||||||||||||||    
T  34777128 aacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccatacccaaa 34777070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 1012667 - 1012622
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||| | | |||||||||| ||||||||||||||||||||||    
T  1012667 acgggtaatgggtatataggtacccaccccgaacccatacccaaac 1012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 27932475 - 27932422
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || ||| |||||| | |||||||||| ||||||||||||||||    
T  27932475 aacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 45236127 - 45236075
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccata 61  Q
    |||||||||| || |||||||| | | |||||||||| |||||||||||||||    
T  45236127 aacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccata 45236075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 3774122 - 3773905
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaat 122  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||        ||| |||| |||   ||||||||||||||| |||||||||||| | |    
T  3774122 acgggtaacgaggatataggtacccaccctgaacccatactcaaa--------tccgtcccgaatttagaaaatcaatttattaccccttttatataatt 3774031  T
Q  123 agaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttccatgtct 222  Q
    || |||||||||   |||| |||| ||||||||| ||| ||| |||  ||||||  |||| |  ||||||||||||||| |||||||||||| |||| ||    
T  3774030 aggaacccaaacgcaaaatcattttactcacacagtcagagtttcagactttcatatgacacccatttatcatagttctatcttttctcctttcatgcct 3773931  T
Q  223 cacaatttcggcctctctctgctcct 248  Q
    |||| | ||||||||||||| |||||    
T  3773930 cacactctcggcctctctcttctcct 3773905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 43550524 - 43550671
Alignment:
Q  99 atttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagt 198  Q
    ||||||| |||||| ||||| |||||||||||||||| ||||| |||||||||| |   ||| ||||||| ||||||| || || | ||||||||| | |    
T  43550524 atttattaccccttctatataaatagaaacccaaaccctaaatcatttcactcaaatg-tcagagtctcagtctttcaattaacacttatttatcacatt 43550622  T
Q  199 tctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    ||| |||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  43550623 tctttcttttctccttccatatctcacaatctcggcctctatcttctcc 43550671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 11472793 - 11472947
Alignment:
Q  71 ccaaatccatcccaaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcatt 170  Q
    |||||||| |||||||||  |||||||||||||||   |||||||||| |||||||||| ||||| ||||| |||||||||||  | | | ||||||| |    
T  11472793 ccaaatccgtcccaaatga-gaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatcatttcactcacgtagttagagtctcagt 11472891  T
Q  171 ctttcagttgacccatatttatcatagttctctcttttctccttccatgtctcaca 226  Q
    |||| || |||| |  | |||||||||||||||||| ||||||||||| |||||||    
T  11472892 cttttagatgacactcacttatcatagttctctcttatctccttccatatctcaca 11472947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 242
Target Start/End: Complemental strand, 4101541 - 4101383
Alignment:
Q  85 aatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtc-tcattctttcagttgacc 183  Q
    |||| |||||||||||||||| ||  |||||| | |||| |||| |||||| | ||| ||||||||||||||||||||  | ||| ||||| |||||||     
T  4101541 aatgttgaaaatcaatttattaccaattttatttaaataaaaactcaaacccttaatcatttcactcacacaatcaaaaccctcagtcttttagttgaca 4101442  T
Q  184 catatttatcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    | ||||| |||||||||| ||||||||||||| || | ||||||| ||| |||||||||    
T  4101441 cttatttgtcatagttctttcttttctccttcgatatatcacaatctcgacctctctct 4101383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 31345518 - 31345384
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||| | ||  |||||||| ||||||||| |||||  || || |||||||||||||||||||||||||| || || || |||| |  | |||    
T  31345518 aaaatcaatttactaccatttttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtcatttagatgacactcactta 31345419  T
Q  192 tcatagttctctcttttctccttccatgtctcaca 226  Q
    ||||| ||||||||||||| ||||||| |||||||    
T  31345418 tcataattctctcttttcttcttccatatctcaca 31345384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 32546256 - 32546200
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  32546256 acgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaac 32546200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 10072533 - 10072477
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||| ||||||||||||| | |||||||||| |||||||||||||||||||    
T  10072533 aacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 6557855 - 6557961
Alignment:
Q  120 aatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctccttccatg 219  Q
    ||||||| | |||||  ||||| |||||||||||||||||||||||||| |||||||| |||| |  | || ||  |||||||||| |||||||||||      
T  6557855 aatagaatctcaaactctaaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcacttctctaagttctctctcttctccttccaca 6557954  T
Q  220 tctcaca 226  Q
    |||||||    
T  6557955 tctcaca 6557961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 30650698 - 30650640
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||||||||||||||    
T  30650698 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaa 30650640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 23533721 - 23533854
Alignment:
Q  107 ccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctt 206  Q
    |||||||| ||| | |||||||||||||  ||||| |||||||||||| | ||| ||||||| | |||||| |||| |  |||||| | ||||||||||     
T  23533721 ccccttttgtataattagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgtttcagatgacactcatttattacagttctctcta 23533820  T
Q  207 ttctccttccatgtctcacaatttcggcctctct 240  Q
    || || || ||| ||||||| | |||||||||||    
T  23533821 ttttcatttcatatctcacattctcggcctctct 23533854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 16866236 - 16866177
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||| |||||| | |||||||||| ||||||||||||||||||||||    
T  16866236 aacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaac 16866177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 18125254 - 18125313
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||| |||||||||||    
T  18125254 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacgcatacccaaac 18125313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 18825898 - 18825957
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||||| |||||||||    
T  18825898 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaac 18825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 21702726 - 21702671
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccc 64  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||    
T  21702726 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccc 21702671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 35074537 - 35074478
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| || |||||||||||||||||||    
T  35074537 aacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaac 35074478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 3157076 - 3156926
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| |||||  ||||| |||||||||||||| | |||||  |||||||| |  | ||| |||||   ||||| || |||| |  | ||    
T  3157076 gaaaatcaatttattacccctactatataaatagaaacccaaatcctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcactt 3156977  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctc 241  Q
    || ||||||||||||||| ||||||||| | ||||| | || |||||||||    
T  3156976 attatagttctctcttttttccttccatatgtcacactctccgcctctctc 3156926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 37217898 - 37217848
Alignment:
Q  190 tatcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||||||||||    
T  37217898 tatcatagttctctcttctctccttccatatctcacactctcggcctctct 37217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 45885791 - 45885845
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacc 63  Q
    |||||||||| || ||||||||| || |||||||||| |||||||||||||||||    
T  45885791 aacacgggtatgggacgggtaacaagtatataggtacccaccccgaacccatacc 45885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 19440112 - 19440260
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    ||||||||||||   |||||||  ||| |||||||||||||||  ||||| |||||||||||| | ||| ||||||| | || ||| |||| |  |||||    
T  19440112 aaaatcaatttaccacccctttggtataaatagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgttccagatgacactcattta 19440211  T
Q  192 tcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    | |  ||||||||| || || || ||| ||||||| | |||||||||||    
T  19440212 ttacggttctctctattttcatttcatatctcacattatcggcctctct 19440260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 27063202 - 27063146
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||| | |||| ||||| ||||||| ||||||||||||||| |||||||||||    
T  27063202 acgggtacaggacggataacggggatatatgtactcaccccgaactcatacccaaac 27063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 45380171 - 45380115
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||||||||| | |||||||||| ||||||||||||||||| ||||    
T  45380171 acgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacctaaac 45380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 12980444 - 12980385
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||| | | ||||| |||| ||||||||||||||||||||||    
T  12980444 aacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaac 12980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 17851921 - 17851862
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||||||||||   |||||||||| || |||||||||||||||||||    
T  17851921 aacacgggtatgggacgggtaacggatatataggtacccatcccgaacccatacccaaac 17851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 27850352 - 27850411
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| |  ||||||||| || |||||||||||||||||||    
T  27850352 aacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaac 27850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 29292695 - 29292636
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcact 150  Q
    ||||||||||||| | |||||||||||| || ||||| ||||||| ||||| ||||||||    
T  29292695 gaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaattatttcact 29292636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 44794054 - 44794112
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |  |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  44794054 aacacgggtatgagacgggtaacgagtata-aggtacccaccccgaacccatacccaaac 44794112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 5377152 - 5377094
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    ||||| |||| || |||||||| | | |||||||||| |||||||||||||||||||||    
T  5377152 aacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3226972 - 3227025
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || |||||||||  | |||||||||| ||||||||||||||||    
T  3226972 aacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 33841145 - 33841092
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| || |||||||||  || |||| |||||||||||||||||||||    
T  33841145 aacacgggtatgggacgggtaacatggttatatgtactcaccccgaacccatac 33841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 43218336 - 43218291
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||||||  |||||| ||||||||||||||| |||||||||||    
T  43218336 acgggtaacggcgatatatgtactcaccccgaactcatacccaaac 43218291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2630594 - 2630658
Alignment:
Q  4 tttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||| |||| ||||| || |||||| ||| | |||||| ||| ||||||||||||||||||||||    
T  2630594 tttaaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaac 2630658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17885540 - 17885476
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||||| |||| ||||| || |||||||||| | |||||||| |  ||||||||||||||||||    
T  17885540 gattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccataccca 17885476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 18684038 - 18683982
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||  ||||||| |||  |||| |||||||||||||||||    
T  18684038 acgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaac 18683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 22973452 - 22973396
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||| | ||||||  |||| |||| |||||||||||||||||    
T  22973452 acgggtacgggacgggtaatggggatatctgtacccacctcgaacccatacccaaac 22973396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 23475365 - 23475513
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattta 191  Q
    |||||||||||| | ||| |||| ||| |||| ||||||||||  ||||| |||||||||||| | ||| |||| || | |||||| |||| |  |||||    
T  23475365 aaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactcacatagtcagagtcccagtgtttcagatgacactcattta 23475464  T
Q  192 tcatagttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    | | ||||||| || || || || ||| ||||||| | ||| |||||||    
T  23475465 ttacagttctcactattttcatttcatatctcacattatcgacctctct 23475513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 44845164 - 44845220
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||| ||| |||||||||  ||| |||||||||||||||| |||||    
T  44845164 acgggtacgggacggttaatgaggatatatttacccaccccgaacccatacacaaac 44845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 29656836 - 29656992
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccata-ttt 190  Q
    ||||||||||||||  ||||||||||| |||| |||||  |||| ||||| |||| ||||||||| ||||||||||| |||||||| |||| |  | |||    
T  29656836 aaaatcaatttattatcccttttatataaataaaaaccataaccctaaatcatttgactcacacagtcaaagtctcagtctttcagatgacactgacttt 29656935  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||| ||||||||| ||||||| ||| ||||||| | ||||||||||||| ||||    
T  29656936 atcataattctctcttatctccttacatatctcacattctcggcctctctcttctcc 29656992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 25210445 - 25210209
Alignment:
Q  4 tttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaattta 103  Q
    |||| |||||||||| || |||||||||||||||||| |||| |||||| |||||||||| ||||        || |||| ||||  ||||||||||||     
T  25210445 tttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaac--------ccctcccgaatgtagaaaatcaatttg 25210354  T
Q  104 ttgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctct 203  Q
    || ||| |||||||| ||||||||| |||||| ||||| |||||||||||||| ||  |||||||   ||| || || | |  | ||||||||||| |||    
T  25210353 ttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcacttatcatagttatct 25210254  T
Q  204 cttttctccttccatgtctcacaatttcggcctctctctgctcct 248  Q
    |||||| |||| |||| |||||| | |||| |||||||| |||||    
T  25210253 cttttcacctttcatggctcacactctcggactctctcttctcct 25210209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 34214757 - 34214907
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||| ||||||||||||||  ||||||| ||||||||| |||  || |||| |||||||| ||||| ||| ||||||| |||||||  |||| |  | ||    
T  34214757 gaaagtcaatttattgccctgtttatataaatagaaactcaactct-aaatcatttcactaacacagtcagagtctcagtctttcacatgacactcactt 34214855  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    |||||||||| |||||||||||||| || ||||||| |||||||||||||||    
T  34214856 atcatagttcgctcttttctccttcgatatctcacactttcggcctctctct 34214907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 13531938 - 13531867
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaa 162  Q
    |||||||||||||||  || |||||||| ||||||||| |||||| ||||| ||||||||||||||||||||    
T  13531938 gaaaatcaatttattatccattttatataaatagaaactcaaaccctaaatcatttcactcacacaatcaaa 13531867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 35248411 - 35248637
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    |||||||||| || |||||||| | ||||| |||||| ||||||||||||||||||||||        || |||  ||||  ||||   ||| || | ||    
T  35248411 aacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaac--------ccgtcctgaatgtagaaa---aatata-tacc 35248498  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctctttt 208  Q
    |||||||||| ||||||||   ||||| ||||| ||||||||||||||  || ||||||| |||||||  |||| |    |||| ||||||||||||| |    
T  35248499 ccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgcttattatagttctctcttat 35248598  T
Q  209 ctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||||||| ||||||| ||| ||||||||||| ||||    
T  35248599 ctccttccatatctcacacttttggcctctctcttctcc 35248637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 31600873 - 31601017
Alignment:
Q  96 tcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcat 195  Q
    |||||||| | | |||||||||| ||||||||| |||||  ||||| |||||||||| ||| | | ||||| | |||||||  |||| |  | |||||||    
T  31600873 tcaatttaatacgccttttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcat 31600972  T
Q  196 agttctctcttttctccttccatgtctcacaatttcggcctctct 240  Q
    ||||||||||| | ||||||||| ||||||| | | |||||||||    
T  31600973 agttctctcttctatccttccatatctcacactattggcctctct 31601017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 13954734 - 13954611
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||| ||||| || ||||||||| ||||||||| | |||| ||||| ||||||||||| |  | | |||||||  ||||||| |||| |  | ||    
T  13954734 gaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactcactt 13954635  T
Q  191 atcatagttctctcttttctcctt 214  Q
    || |||||||||||||||||||||    
T  13954634 atgatagttctctcttttctcctt 13954611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 14095941 - 14095818
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||| ||||| || ||||||||| ||||||||| | |||| ||||| ||||||||||| |  | | |||||||  ||||||| |||| |  | ||    
T  14095941 gaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactcactt 14095842  T
Q  191 atcatagttctctcttttctcctt 214  Q
    || |||||||||||||||||||||    
T  14095841 atgatagttctctcttttctcctt 14095818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 30847009 - 30846950
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  30847009 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 30846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 36128132 - 36128191
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || | |||||||| | |||||||||||||||||||||||||||||||||    
T  36128132 aacacgggtatgggatgggtaacgggtatataggtactcaccccgaacccatacccaaac 36128191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38342537 - 38342604
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||| ||||| |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  38342537 gattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaac 38342604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18485719 - 18485652
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||||||| | |||||||||| ||||||| |||| ||||| ||||||||||||||||    
T  18485719 gattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccatacccaaac 18485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24414158 - 24414217
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||  | |||||||||| ||||||||||||||||||||||    
T  24414158 aacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaac 24414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43371624 - 43371557
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || |||||||||| |||||||||| ||||||| |||| |||||| ||| |||||||||||    
T  43371624 gattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaac 43371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30696995 - 30696848
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaat 100  Q
    ||||||| |||| || ||||  |||||||||   |||||| |||| |||||||||| |||||||||||        | ||||||||||   |||||||||    
T  30696995 gattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaac--------ctatcccaaatgtaaaaaatcaat 30696904  T
Q  101 ttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacaca 156  Q
    ||||| ||| |||||||| ||||||||  |||||| ||||| || |||||||||||    
T  30696903 ttattacccattttatataaatagaaattcaaaccctaaatcatgtcactcacaca 30696848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 35409274 - 35409408
Alignment:
Q  113 ttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcatagttctctcttttctcc 212  Q
    |||||| |||| ||||||||||  ||||  |||||||| ||||| ||| ||||||| |||| ||  |||| |  | ||||||||||||  |||||||| |    
T  35409274 ttatataaataaaaacccaaactctaaactatttcacttacacagtcagagtctcagtcttacatatgacactcacttatcatagttcattcttttcttc 35409373  T
Q  213 ttccatgtctcacaatttcggcctctctctgctcc 247  Q
     ||||| ||||||| | ||||||||||||| ||||    
T  35409374 gtccatatctcacactctcggcctctctcttctcc 35409408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 3547226 - 3547170
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||||||  |||||| |||| ||||||||||||||| ||||||    
T  3547226 acgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaac 3547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 34320623 - 34320535
Alignment:
Q  80 tcccaaatggtgaaaatcaatttattg-ccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctc 167  Q
    |||| |||| ||||||||| ||||||| ||||||||| ||||| |||||| |||| | ||||| ||||||  |||||||||| ||||||    
T  34320623 tcccgaatgttgaaaatcattttattgcccccttttaaatcaaaagaaacacaaatcataaatcatttcagccacacaatcagagtctc 34320535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 8915963 - 8916022
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||  | |||||||||| |||||||||||||||| |||||    
T  8915963 aacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaac 8916022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 9632449 - 9632390
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||| | | |||||||||  ||||||||||||||||||||||    
T  9632449 aacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaac 9632390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 37106755 - 37106700
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccc 64  Q
    |||||||||| || |||||||||| | |||||||||| ||| ||||||||||||||    
T  37106755 aacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 4961479 - 4961536
Alignment:
Q  11 cacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||| || ||| |||||  |||||||||||| |||| |||||||||||||||||    
T  4961479 cacgggtatgggacgtgtaacagggatataggtacacacctcgaacccatacccaaac 4961536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 14331576 - 14331531
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| ||||||| |||| ||| ||||||||||||||||||    
T  14331576 acgggtaacggggatatatgtacccactccgaacccatacccaaac 14331531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30978985 - 30978931
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||||  || ||||||||||||| |||  ||||||||||||||||||||||    
T  30978985 acgggtacgga--ggataacgaggatatatgtatccaccccgaacccatacccaaac 30978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 40734707 - 40734768
Alignment:
Q  115 atatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttca 176  Q
    |||| |||| ||||| ||||| ||||| |||||||||||||| ||| ||||||| |||||||    
T  40734707 atataaataaaaaccaaaaccctaaatcatttcactcacacagtcagagtctcagtctttca 40734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7314666 - 7314730
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    ||||||| || ||| ||| || |||||||||| | |||||||| | |||||||||||||||||||    
T  7314666 gattttaaaatacgagtatgggacgggtaacgggtatataggttcccaccccgaacccataccca 7314730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 11959071 - 11959019
Alignment:
Q  16 gtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| |||||||||||||||||| ||||   |||||||| |||||||||||    
T  11959071 gtacgggacgggtaacgaggatatatgtacatgccccgaactcatacccaaac 11959019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 17845493 - 17845556
Alignment:
Q  92 aaaatcaatttattgccccttttatatcaatagaaac-ccaaaccttaaatgatttcactcacac 155  Q
    ||||||||||||||  || |||||||| ||||||||| ||||||| ||||| |||||||||||||    
T  17845493 aaaatcaatttattatcctttttatataaatagaaactccaaacc-taaatcatttcactcacac 17845556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 27252550 - 27252405
Alignment:
Q  96 tcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatatttatcat 195  Q
    |||||||||| ||| |||||||| |||||||||| ||| | ||||| |||||||||||||| | | ||| ||| |||||||| |||| |  | ||||| |    
T  27252550 tcaatttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagttagagtatcagtctttcagatgacactcacttatctt 27252451  T
Q  196 agttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  27252450 agttctctc-tttctccttccatatctcacactctcggcctctctct 27252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 37032198 - 37032320
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| ||| |||||||| |||| |||| |||||| ||||| |||||||||| ||||||| ||||||  |||||||| |||| ||   ||    
T  37032198 gaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactcatacaatcagagtctcggtctttcagatgacacaa--tt 37032295  T
Q  191 atcatagttctctcttttctccttc 215  Q
    ||||||||||| |||||||||||||    
T  37032296 atcatagttctttcttttctccttc 37032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 772894 - 773028
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||||||||| ||| |||| ||| ||||||||| |||||||| ||| ||||||||||||||||| ||||||||  |||  || |||| |    ||    
T  772894 gaaaatcaatttattaccc-ttttgtataaatagaaactcaaaccttgaatcatttcactcacacaatctaagtctcacacttctagatgacactcgctt 772992  T
Q  191 atcatagttctctcttttctccttccatgtctcaca 226  Q
     ||||| ||||||||||||||||| |||||||||||    
T  772993 gtcatatttctctcttttctcctttcatgtctcaca 773028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 30904842 - 30904976
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaacggccaaatccatcccaaatggtgaaaatcaatttattgcc 108  Q
    ||||||||||||| ||||||| || |||||||||||| ||||||||||||||||        |||||||| || | ||||  | ||||||||||| | ||    
T  30904842 aacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatac--------ccaaatccgtctcgaatgtaggaaatcaatttactacc 30904932  T
Q  109 ccttttatatcaatagaaacccaaaccttaaatgatttcactca 152  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||    
T  30904933 ccttttatataaatagaaacccaaacccttaatcatttcactca 30904976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 3414633 - 3414768
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||||| |||| | |||||||| ||| |||| ||| | ||||| ||||| |||||||||||| | |||||||||| |||||| ||||||| |    ||    
T  3414633 gaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtcaaagtctcgttcttttagttgacactctctt 3414732  T
Q  191 atcatagttctctcttttctccttccatgtctcaca 226  Q
     ||| |||||| |||| ||||||||||| |||||||    
T  3414733 ctcaaagttctatcttatctccttccatatctcaca 3414768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 23546968 - 23547027
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  23546968 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 23547027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 44639336 - 44639277
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  44639336 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 44639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 4557331 - 4557389
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    |||| ||||| || |||||||||||| |||||||||| |||||||||||||||||||||    
T  4557331 aacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaa 4557389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23154090 - 23154143
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    |||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||    
T  23154090 aacacgggtatggaacgggtaacgagtatataggtacccactccgaacccatac 23154143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 7469804 - 7469863
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| |||||||||||||||| |||||    
T  7469804 aacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacacaaac 7469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 29284398 - 29284339
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | |||||||||| || |||||||||||||||||||    
T  29284398 aacacgggtatgggacgggtaacgggtatataggtacccagcccgaacccatacccaaac 29284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 44172688 - 44172629
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||| |||| ||||||||||||||||||||||    
T  44172688 aacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 44172629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 44179388 - 44179329
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||| |||| ||||||||||||||||||||||    
T  44179388 aacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 44179329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 44953461 - 44953520
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||||||||||||||||||| ||||| |||||    
T  44953461 aacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaac 44953520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 49580126 - 49580067
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||||| |||||||||| |||| ||||||||||| |||||    
T  49580126 aacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaac 49580067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 52198217 - 52198158
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||| |||| || |||||||||| | |||||||||| ||||||||||||||||||||||    
T  52198217 aacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 52198158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 40890255 - 40890217
Alignment:
Q  188 tttatcatagttctctcttttctccttccatgtctcaca 226  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  40890255 tttatcatagttctctcttttctccttccatctctcaca 40890217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29842378 - 29842317
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatac 62  Q
    ||||||| |||||||||| || || ||||||| | |||||||||| ||||||||||||||||    
T  29842378 gattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 34154476 - 34154420
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||| ||||| | |||||||||| || |||||||||| |||||||||||||||||||    
T  34154476 aacatgggtatgaaacgggtaacaagaatataggtacccaccccgaacccataccca 34154420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 3385882 - 3385941
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||||||||| || |||||||||||||||||||  |||| |||| ||||||| ||||    
T  3385882 aacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaac 3385941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 39655299 - 39655358
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||  | |||||||||| |||||| |||||||||||||||    
T  39655299 aacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaac 39655358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 44252809 - 44252750
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || ||| |||||  | |||||||||| ||||||||||||||||||||||    
T  44252809 aacacgggtatgggacgtgtaacaggtatataggtacccaccccgaacccatacccaaac 44252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 48305667 - 48305726
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||| ||| || | |||||||||| ||||||||||| ||||||||||    
T  48305667 aacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaac 48305726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 27937725 - 27937663
Alignment:
Q  93 aaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacac 155  Q
    |||| |||||||| |  ||||||||| |||||||||| ||||| ||||| |||||||||||||    
T  27937725 aaattaatttattacagcttttatataaatagaaacctaaaccctaaatcatttcactcacac 27937663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34119726 - 34119660
Alignment:
Q  1 gattttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaa 67  Q
    ||||||| |||||||||| |  |||| ||||  | |||||||||| |||||||||||||||||||||    
T  34119726 gattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccatacccaaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 53631973 - 53631907
Alignment:
Q  2 attttagaacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||| |||||| ||| |  |||||||||| | |||||||||| |||||||||||||||| |||||    
T  53631973 attttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaac 53631907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 54317192 - 54317147
Alignment:
Q  23 acgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| | |||||||||| |||||||||||||| |||||||    
T  54317192 acgggtaacgggtatataggtacccaccccgaacccattcccaaac 54317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 23580889 - 23580833
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||| ||| | ||||||||||| | |||||||||| ||| |||||||||||||||    
T  23580889 aacacgagtatgaaacgggtaacgggtatataggtacccactccgaacccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 39728730 - 39728674
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    ||||||| || | |||||||| | ||||| |||| ||||||||||||||||||||||    
T  39728730 acgggtatgggatgggtaacgggtatataagtacccaccccgaacccatacccaaac 39728674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 48390843 - 48390899
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccataccca 65  Q
    |||||||||| || |||||||||| | |||||||||| || || |||||||||||||    
T  48390843 aacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccataccca 48390899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 14842 - 14754
Alignment:
Q  95 atcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacc 183  Q
    ||||||||||| |||||||||||| |||||||||  |||| |||||| |||||| || |||||||||||||||| |||||||| |||||    
T  14842 atcaatttatttccccttttatataaatagaaacttaaacattaaatcatttcattcgcacaatcaaagtctcagtctttcagatgacc 14754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 247
Target Start/End: Complemental strand, 1099 - 944
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    |||||| |||||||| ||| |||||||| ||||||||| |||| ||||||| |||||||||||    ||||||||||||||||| || ||||    | ||    
T  1099 gaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactcacgtggtcaaagtctcattctttaagatgacaatcactt 1000  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctctgctcc 247  Q
    |||||| |||||| |||||||||| ||| ||||||| | ||  ||||||||| ||||    
T  999 atcataattctct-ttttctcctttcatatctcacactctcctcctctctcttctcc 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 242
Target Start/End: Original strand, 4680 - 4831
Alignment:
Q  91 gaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacacaatcaaagtctcattctttcagttgacccatattt 190  Q
    ||||||||| ||||  |||||||||||| |||||||| | ||||  ||||| |||||||||||||| ||| |||| |  ||||| || | || |  | ||    
T  4680 gaaaatcaaattataaccccttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataacactcactt 4779  T
Q  191 atcatagttctctcttttctccttccatgtctcacaatttcggcctctctct 242  Q
    |||||||||||||||||| ||||||||| | ||||| | |||| ||||||||    
T  4780 atcatagttctctcttttttccttccatatttcacactatcggtctctctct 4831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 70154 - 70098
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||||||||||| |||| |||||| |||||||||||||||    
T  70154 acgggtacgggacgggtaacgaggatatatgtacccaccccaaacccatacccaaac 70098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 105498 - 105554
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||||  ||||||| |||| ||||||||||||||||||||||    
T  105498 acgggtacgggacgggtaacagggatatatgtacccaccccgaacccatacccaaac 105554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 128150 - 128206
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||||    
T  128150 acgggtacgggacgggtaatggggatatatgtacccaccccgaacccatacccaaac 128206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 33455 - 33396
Alignment:
Q  9 aacacgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||| || |||||||||| | ||||| |||| ||||||||||||||||||||||    
T  33455 aacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaac 33396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 211423 - 211367
Alignment:
Q  12 acgggtacggaacgggtaacgaggatataggtactcaccccgaacccatacccaaac 68  Q
    |||||||||  |||||||||  ||||||| |||| ||||||||||||||||||||||    
T  211423 acgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaac 211367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University