View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_low_80 (Length: 235)
Name: NF5265_low_80
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_low_80 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 49861505 - 49861708
Alignment:
| Q |
15 |
acattttactgtgccattcatttattctactcagatgaattcgaacatggataatgaaagagaaatcgaaaacaattatgccctcagcggcaagataatg |
114 |
Q |
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| T |
49861505 |
acattttactgtgccattcatttattctactcagatgaattcgaacatggataatgaaagagaaatcgaaaacaattatgccctcagcggcaagataatg |
49861604 |
T |
|
| Q |
115 |
ctaaccgccattatcattctcttcgccgttatcataataatgctctgtctccattttctaattcgatactaccttctacgtgatcgcacacgtcaacaca |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49861605 |
ctaaccgccattatcattctcttcgccgttatcataataatgctctgtctccattttctaattcgatactaccttctacgtgatcgcacacgtcaacacc |
49861704 |
T |
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| Q |
215 |
tccg |
218 |
Q |
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|||| |
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| T |
49861705 |
tccg |
49861708 |
T |
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