View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_low_82 (Length: 228)
Name: NF5265_low_82
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_low_82 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 40663907 - 40663681
Alignment:
| Q |
1 |
aagttacaagccatgaatccctatggccggactaaggtaactatcacccatcggtttgttctagattgcttctttcattctttttgttttcccatttgat |
100 |
Q |
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| T |
40663907 |
aagttacaagccatgaatccctatggccggactaaggtaactatcacc-atcggtttgttctagattgcttctttcattctttttgttttcccatttgat |
40663809 |
T |
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| Q |
101 |
ggtttcaagcttgtagtttcaatcaaataataatgtgcctggttttgattacttttagtattaacaaccgtgttaagtataaacttctgaattaatatgc |
200 |
Q |
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| T |
40663808 |
ggtttcaagcttgtagtttcaatcaaataataatgtgcctggttttgattacttttagtattaacaaccgtgttaagtataaacttctgaattaatatgc |
40663709 |
T |
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| Q |
201 |
ctgtttttgagttttaatgaatcgtctt |
228 |
Q |
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|||||||||||||||||||||| ||||| |
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| T |
40663708 |
ctgtttttgagttttaatgaattgtctt |
40663681 |
T |
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