View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5265_low_84 (Length: 226)
Name: NF5265_low_84
Description: NF5265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5265_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42324227 - 42324448
Alignment:
| Q |
1 |
ctaactaattaaagtaaaaacaagttttatttcatgatatgtacaataagacaagataaaa-gattacttctttgatacaaatacgacacataaccaaga |
99 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |
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| T |
42324227 |
ctaactaattaaagtaaaaacaagttttatttcttgatatgtataataagacaagataaaaagattactactttgatacaaatacgacacataacgaaga |
42324326 |
T |
|
| Q |
100 |
aaacagtacaataatatttatccaatggacagtatagcaagctagcaaaacagaaaatgattccctttctgcgacacacgtacgtgaaaacacagagttt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42324327 |
aaacagtacaataatatttatccaatggacagtatagcaagctagcaaaacagaaaatgattccctttctgcgacacacgtacgtgaaaacacagagttt |
42324426 |
T |
|
| Q |
200 |
ctagaactaaagaaactctctt |
221 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
42324427 |
ctagaactaaagaaactctctt |
42324448 |
T |
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