View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5268-Insertion-6 (Length: 393)
Name: NF5268-Insertion-6
Description: NF5268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5268-Insertion-6 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 263
Target Start/End: Complemental strand, 909929 - 909678
Alignment:
| Q |
8 |
aatatgtcatcataacgattttacggtagttggttggttaattacattgagtttcctatttgttgatgagggatgtgatcaaggaaactcacagaaaatg |
107 |
Q |
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| T |
909929 |
aatatgtcatcataaagattttagggtagatggttggttaatgacattgagtttcctatttgttgatgagggatgtgatcaaggaaactcacagaaaatg |
909830 |
T |
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| Q |
108 |
gaagattttccaatgtttctatatataagaaagaattcaccattccttttcccataaacgattccaaataaaaccaaactcaaaacataagatttcactg |
207 |
Q |
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| T |
909829 |
gaagattttccaatgtttctata----agaaagaattcaccattccttttcccataaacaattccaaataaaaccaaactcaaaacataagatttcactg |
909734 |
T |
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| Q |
208 |
aaaatatatgcgggagattaattgtcacgatatcctcctcaaacttagtgttactg |
263 |
Q |
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| T |
909733 |
aaaatatatgcgggagattaattgtcacaatatcctcctcgaacttactgttactg |
909678 |
T |
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