View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5268_high_23 (Length: 243)
Name: NF5268_high_23
Description: NF5268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5268_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 3693680 - 3693448
Alignment:
| Q |
1 |
atagtgctcgatgcgtagagaggcggaagattcagatgttgttggcttttcctgactcactttacagtggctatgagtttccgtttcgtcctaatacaac |
100 |
Q |
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| T |
3693680 |
atagtgctcgatgcgtagagaggcggaagattcagatgttgttggcttttcctgactcactttacagtggctatgagtttccgtttcgtcctaatacaac |
3693581 |
T |
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| Q |
101 |
cttaatatctgaaggggtgtgggatgagaaggagaatcggttttgtggaattgcatgccggattttgaacttcacagaaactccttatgttggaaattgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3693580 |
cttaatatctgaaggggtgtgggatgagaaggagaatcggttttgtggagttgcatgccggattttgaacttcacagaaactccttatgttggaaattgc |
3693481 |
T |
|
| Q |
201 |
tcgattaagttcatgttatggtttccttctgtg |
233 |
Q |
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||||||||||||| ||||||||||||||||||| |
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| T |
3693480 |
tcgattaagttcacgttatggtttccttctgtg |
3693448 |
T |
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