View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5268_low_14 (Length: 322)

Name: NF5268_low_14
Description: NF5268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5268_low_14
NF5268_low_14
[»] chr8 (39 HSPs)
chr8 (19-258)||(33357316-33357556)
chr8 (250-304)||(33357089-33357143)
chr8 (19-81)||(13186429-13186491)
chr8 (29-87)||(16388573-16388631)
chr8 (29-82)||(39072021-39072074)
chr8 (30-75)||(40318345-40318390)
chr8 (19-75)||(4406030-4406086)
chr8 (19-75)||(31608883-31608939)
chr8 (20-80)||(34060486-34060546)
chr8 (33-81)||(36186448-36186496)
chr8 (20-75)||(13186062-13186117)
chr8 (20-75)||(16388897-16388952)
chr8 (27-81)||(4994653-4994707)
chr8 (29-75)||(39071678-39071724)
chr8 (29-75)||(42803598-42803644)
chr8 (29-74)||(38862943-38862988)
chr8 (30-75)||(40317966-40318011)
chr8 (19-75)||(8316655-8316711)
chr8 (27-75)||(9065748-9065796)
chr8 (19-75)||(34061698-34061754)
chr8 (20-75)||(38862620-38862675)
chr8 (29-75)||(4995036-4995082)
chr8 (29-75)||(8316968-8317014)
chr8 (29-75)||(12198952-12198998)
chr8 (29-75)||(12443380-12443426)
chr8 (29-75)||(20385570-20385616)
chr8 (29-75)||(20386810-20386856)
chr8 (29-75)||(23663547-23663593)
chr8 (29-75)||(23663894-23663940)
chr8 (29-75)||(38956052-38956098)
chr8 (29-74)||(1425056-1425101)
chr8 (29-78)||(9065664-9065713)
chr8 (29-78)||(12199286-12199335)
chr8 (29-74)||(12273233-12273278)
chr8 (29-78)||(12443714-12443763)
chr8 (30-75)||(30459373-30459418)
chr8 (29-74)||(34176448-34176492)
chr8 (29-82)||(34177350-34177403)
chr8 (29-81)||(23698624-23698676)
[»] chr6 (24 HSPs)
chr6 (19-83)||(11434796-11434860)
chr6 (30-82)||(12081017-12081069)
chr6 (29-74)||(22617886-22617931)
chr6 (19-75)||(21627715-21627771)
chr6 (27-74)||(30804239-30804286)
chr6 (29-80)||(33647331-33647382)
chr6 (29-75)||(679868-679914)
chr6 (29-75)||(3059636-3059682)
chr6 (29-75)||(30726139-30726185)
chr6 (29-75)||(33517914-33517960)
chr6 (33-74)||(3059260-3059301)
chr6 (29-82)||(8090307-8090360)
chr6 (33-86)||(12408555-12408608)
chr6 (20-75)||(17734198-17734253)
chr6 (20-75)||(17734534-17734589)
chr6 (27-74)||(30803864-30803911)
chr6 (29-75)||(681108-681154)
chr6 (20-82)||(8418407-8418468)
chr6 (29-75)||(12080638-12080684)
chr6 (29-75)||(12407510-12407556)
chr6 (29-75)||(21628093-21628139)
chr6 (29-87)||(26463169-26463227)
chr6 (29-75)||(30337451-30337497)
chr6 (47-75)||(15115341-15115369)
[»] chr5 (56 HSPs)
chr5 (19-83)||(19892302-19892366)
chr5 (29-74)||(5835806-5835851)
chr5 (19-75)||(5024021-5024077)
chr5 (29-85)||(39453292-39453348)
chr5 (20-75)||(6150456-6150511)
chr5 (29-79)||(35512494-35512544)
chr5 (30-83)||(6150801-6150854)
chr5 (30-75)||(32242622-32242667)
chr5 (29-74)||(35512151-35512196)
chr5 (29-81)||(14194419-14194471)
chr5 (30-78)||(16082976-16083024)
chr5 (23-75)||(16083317-16083369)
chr5 (29-80)||(5993886-5993937)
chr5 (27-74)||(11740690-11740737)
chr5 (20-75)||(18247088-18247143)
chr5 (20-75)||(21265513-21265568)
chr5 (27-74)||(27937377-27937424)
chr5 (27-74)||(32242245-32242292)
chr5 (29-75)||(16157235-16157281)
chr5 (29-75)||(20814515-20814561)
chr5 (29-75)||(20840535-20840581)
chr5 (29-74)||(5024398-5024443)
chr5 (19-64)||(5994259-5994304)
chr5 (25-74)||(10684313-10684362)
chr5 (30-75)||(19517988-19518033)
chr5 (29-74)||(43159194-43159239)
chr5 (31-75)||(17202781-17202825)
chr5 (31-75)||(38442449-38442493)
chr5 (29-72)||(8322784-8322827)
chr5 (31-78)||(37992670-37992717)
chr5 (20-75)||(38475370-38475425)
chr5 (29-75)||(186799-186845)
chr5 (29-75)||(3528875-3528921)
chr5 (29-75)||(3529222-3529268)
chr5 (29-75)||(11761751-11761797)
chr5 (29-75)||(11762097-11762143)
chr5 (29-75)||(16156857-16156903)
chr5 (33-75)||(18247460-18247502)
chr5 (29-75)||(18670204-18670250)
chr5 (29-75)||(19892688-19892734)
chr5 (29-75)||(20840817-20840863)
chr5 (29-75)||(24547505-24547551)
chr5 (29-75)||(27587150-27587196)
chr5 (29-75)||(27587495-27587541)
chr5 (29-75)||(28269424-28269470)
chr5 (29-75)||(28770871-28770917)
chr5 (29-75)||(39453679-39453725)
chr5 (29-75)||(42265737-42265783)
chr5 (29-74)||(11047816-11047861)
chr5 (29-74)||(13362608-13362653)
chr5 (29-82)||(20814131-20814184)
chr5 (29-74)||(21257541-21257586)
chr5 (126-171)||(23311817-23311862)
chr5 (46-75)||(42265889-42265918)
chr5 (29-81)||(13962860-13962912)
chr5 (47-75)||(27937057-27937085)
[»] chr7 (35 HSPs)
chr7 (19-82)||(45010974-45011037)
chr7 (19-75)||(40380054-40380110)
chr7 (19-75)||(42019599-42019655)
chr7 (29-80)||(24388816-24388867)
chr7 (29-75)||(10936174-10936220)
chr7 (29-83)||(27396975-27397029)
chr7 (30-80)||(28105498-28105548)
chr7 (29-74)||(42019977-42020022)
chr7 (29-81)||(5457287-5457339)
chr7 (19-75)||(24389155-24389211)
chr7 (19-82)||(17102359-17102422)
chr7 (29-75)||(28469012-28469058)
chr7 (29-75)||(28469388-28469434)
chr7 (29-75)||(32299085-32299131)
chr7 (29-75)||(42362452-42362498)
chr7 (250-295)||(28557387-28557432)
chr7 (29-74)||(37656855-37656900)
chr7 (19-75)||(17886860-17886916)
chr7 (27-75)||(37657215-37657263)
chr7 (27-75)||(42731797-42731845)
chr7 (29-81)||(48788799-48788851)
chr7 (29-72)||(40379774-40379817)
chr7 (29-75)||(2640180-2640226)
chr7 (29-75)||(6253473-6253519)
chr7 (29-75)||(6253820-6253866)
chr7 (29-75)||(6571015-6571061)
chr7 (29-75)||(10935796-10935842)
chr7 (29-75)||(17102022-17102068)
chr7 (29-75)||(29141556-29141602)
chr7 (31-85)||(32053135-32053189)
chr7 (29-75)||(42731421-42731467)
chr7 (29-74)||(27992088-27992133)
chr7 (29-81)||(20426710-20426762)
chr7 (19-75)||(27396631-27396687)
chr7 (27-75)||(27991741-27991789)
[»] chr4 (49 HSPs)
chr4 (27-81)||(24411726-24411780)
chr4 (29-82)||(15508052-15508105)
chr4 (29-80)||(39539298-39539349)
chr4 (29-75)||(14801738-14801784)
chr4 (29-75)||(15507675-15507721)
chr4 (29-75)||(17355927-17355973)
chr4 (20-75)||(34765751-34765806)
chr4 (19-74)||(35028001-35028056)
chr4 (29-75)||(18831697-18831743)
chr4 (29-79)||(24411356-24411406)
chr4 (29-83)||(44967063-44967117)
chr4 (29-75)||(46661294-46661340)
chr4 (29-83)||(50419017-50419071)
chr4 (29-75)||(51692899-51692945)
chr4 (27-77)||(53701812-53701862)
chr4 (20-82)||(54435468-54435530)
chr4 (29-74)||(43155532-43155577)
chr4 (29-74)||(54086698-54086743)
chr4 (29-81)||(7451830-7451882)
chr4 (19-75)||(10781854-10781910)
chr4 (29-81)||(13058033-13058085)
chr4 (29-77)||(17356302-17356350)
chr4 (27-75)||(23613656-23613704)
chr4 (29-81)||(24711460-24711512)
chr4 (31-75)||(34765382-34765426)
chr4 (27-75)||(51692555-51692603)
chr4 (27-75)||(53129884-53129932)
chr4 (29-81)||(54087075-54087127)
chr4 (29-84)||(7452183-7452238)
chr4 (27-74)||(11108218-11108265)
chr4 (20-75)||(23613311-23613366)
chr4 (29-75)||(148135-148181)
chr4 (29-75)||(10780715-10780761)
chr4 (29-75)||(10974324-10974370)
chr4 (29-75)||(24349676-24349722)
chr4 (29-75)||(24350812-24350858)
chr4 (29-75)||(24711113-24711159)
chr4 (29-75)||(35028378-35028424)
chr4 (29-75)||(48528487-48528533)
chr4 (29-75)||(49879209-49879255)
chr4 (29-75)||(50418670-50418716)
chr4 (29-75)||(53702178-53702224)
chr4 (29-74)||(37248585-37248630)
chr4 (27-80)||(37976531-37976584)
chr4 (19-75)||(1179170-1179226)
chr4 (29-77)||(16006173-16006221)
chr4 (29-77)||(37248236-37248284)
chr4 (47-75)||(52909651-52909679)
chr4 (47-75)||(54713618-54713646)
[»] chr2 (28 HSPs)
chr2 (29-78)||(36480098-36480147)
chr2 (29-75)||(10713103-10713149)
chr2 (29-75)||(36382507-36382553)
chr2 (29-75)||(37895349-37895395)
chr2 (19-75)||(2318880-2318936)
chr2 (27-75)||(39423893-39423941)
chr2 (19-74)||(6588686-6588741)
chr2 (29-75)||(3555252-3555298)
chr2 (126-188)||(7152082-7152144)
chr2 (29-75)||(34448175-34448221)
chr2 (29-75)||(36755468-36755514)
chr2 (19-80)||(15848458-15848519)
chr2 (29-81)||(10712719-10712771)
chr2 (19-75)||(21370572-21370628)
chr2 (29-73)||(44713799-44713843)
chr2 (20-78)||(36479716-36479775)
chr2 (19-82)||(39498649-39498712)
chr2 (29-75)||(2318161-2318206)
chr2 (29-75)||(11163403-11163449)
chr2 (29-75)||(15848090-15848136)
chr2 (29-75)||(16099404-16099450)
chr2 (87-209)||(30481636-30481758)
chr2 (29-75)||(30729623-30729669)
chr2 (32-74)||(37895730-37895772)
chr2 (30-75)||(22051374-22051419)
chr2 (29-82)||(44045382-44045435)
chr2 (19-75)||(25231218-25231274)
chr2 (30-82)||(44714142-44714193)
[»] chr1 (54 HSPs)
chr1 (26-75)||(19017631-19017680)
chr1 (20-81)||(34464820-34464881)
chr1 (27-75)||(30711329-30711377)
chr1 (29-75)||(6367942-6367988)
chr1 (29-83)||(23209707-23209761)
chr1 (29-75)||(36694628-36694674)
chr1 (29-75)||(36710729-36710775)
chr1 (29-82)||(30711707-30711760)
chr1 (19-75)||(5735081-5735137)
chr1 (20-84)||(34464442-34464506)
chr1 (20-75)||(13914438-13914493)
chr1 (27-77)||(40439566-40439617)
chr1 (29-75)||(6367564-6367610)
chr1 (29-75)||(17661854-17661900)
chr1 (29-75)||(19515821-19515867)
chr1 (29-75)||(24009577-24009623)
chr1 (29-75)||(32917640-32917686)
chr1 (29-83)||(35473625-35473679)
chr1 (29-75)||(36694284-36694330)
chr1 (29-75)||(36710385-36710431)
chr1 (29-75)||(40772509-40772555)
chr1 (31-81)||(43759204-43759254)
chr1 (29-82)||(35152338-35152391)
chr1 (30-75)||(35152711-35152756)
chr1 (29-74)||(37578195-37578240)
chr1 (29-74)||(40435348-40435393)
chr1 (29-78)||(42248472-42248521)
chr1 (30-75)||(48779500-48779545)
chr1 (29-81)||(1841455-1841507)
chr1 (27-75)||(7231627-7231675)
chr1 (30-82)||(13914063-13914115)
chr1 (30-74)||(42533027-42533071)
chr1 (19-75)||(46899063-46899119)
chr1 (31-74)||(17692567-17692610)
chr1 (19-70)||(49723096-49723147)
chr1 (29-75)||(1103841-1103887)
chr1 (29-75)||(4960542-4960588)
chr1 (29-75)||(5734012-5734058)
chr1 (29-75)||(13300284-13300330)
chr1 (29-75)||(17662230-17662276)
chr1 (29-75)||(25647886-25647932)
chr1 (29-75)||(26024772-26024818)
chr1 (29-75)||(34850445-34850491)
chr1 (29-75)||(37578572-37578618)
chr1 (29-75)||(41098735-41098781)
chr1 (29-75)||(46899980-46900026)
chr1 (30-75)||(6518177-6518222)
chr1 (19-80)||(19017999-19018060)
chr1 (29-78)||(40210750-40210799)
chr1 (47-75)||(7820956-7820984)
chr1 (20-68)||(14878980-14879028)
chr1 (19-75)||(19322894-19322950)
chr1 (30-74)||(23209365-23209408)
chr1 (47-75)||(40772857-40772885)
[»] chr3 (31 HSPs)
chr3 (19-75)||(2796467-2796523)
chr3 (27-74)||(26463635-26463682)
chr3 (19-74)||(42343101-42343156)
chr3 (20-74)||(53756747-53756801)
chr3 (20-81)||(33689750-33689811)
chr3 (29-81)||(23458359-23458411)
chr3 (29-84)||(33689375-33689430)
chr3 (20-75)||(40758149-40758204)
chr3 (29-79)||(9292241-9292291)
chr3 (29-75)||(9294338-9294384)
chr3 (29-75)||(40033836-40033882)
chr3 (29-74)||(36150530-36150575)
chr3 (29-82)||(41558003-41558056)
chr3 (30-75)||(43384664-43384709)
chr3 (19-75)||(36418058-36418114)
chr3 (29-81)||(40758490-40758542)
chr3 (20-84)||(42342784-42342848)
chr3 (19-75)||(53757093-53757149)
chr3 (29-68)||(23457988-23458027)
chr3 (19-70)||(40033526-40033577)
chr3 (27-74)||(46475158-46475205)
chr3 (29-75)||(3850507-3850553)
chr3 (29-75)||(19741272-19741318)
chr3 (29-75)||(34142598-34142644)
chr3 (19-73)||(41558252-41558306)
chr3 (29-74)||(46474818-46474863)
chr3 (34-74)||(21783403-21783443)
chr3 (47-75)||(26463984-26464012)
chr3 (47-75)||(35712046-35712074)
chr3 (47-79)||(36150610-36150642)
chr3 (47-75)||(41989584-41989612)
[»] scaffold0005 (1 HSPs)
scaffold0005 (29-75)||(37943-37989)
[»] scaffold0075 (2 HSPs)
scaffold0075 (30-82)||(14424-14476)
scaffold0075 (29-75)||(14770-14816)
[»] scaffold0707 (1 HSPs)
scaffold0707 (29-75)||(6459-6505)
[»] scaffold0020 (2 HSPs)
scaffold0020 (29-74)||(140021-140066)
scaffold0020 (29-74)||(139675-139720)
[»] scaffold0031 (2 HSPs)
scaffold0031 (29-75)||(68967-69013)
scaffold0031 (29-75)||(69345-69391)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-75)||(2121-2167)
[»] scaffold0128 (1 HSPs)
scaffold0128 (29-74)||(19860-19905)
[»] scaffold0775 (1 HSPs)
scaffold0775 (27-75)||(4964-5012)


Alignment Details
Target: chr8 (Bit Score: 181; Significance: 9e-98; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 19 - 258
Target Start/End: Complemental strand, 33357556 - 33357316
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaattattcattctcttaactcaacggcagtgtactctt 118  Q
    ||||||| |||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  33357556 atacatggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaattattcattctcttaactcagcggcagtatactctt 33357457  T
Q  119 attcaacatttttt-aacgtgggttaactcacgttgccacttttaatattggttcaattattttttaaaccaatttaactgattttaaaagtactgctga 217  Q
    ||| |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  33357456 atttaacatttttttaacgtgggttaactcatgttgccacttttaagattggttcaattattttttaaaccggtttaactgattttaaaagtactgctga 33357357  T
Q  218 aaaatgtcgaacgaaagttaacttccactaaattaaaataa 258  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33357356 aaaatgtcgaacgaaagttaacttccgctaaattaaaataa 33357316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 33357143 - 33357089
Alignment:
Q  250 ttaaaataatgagtaattttaaaagagagaagatcaattttcccttctatatctg 304  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  33357143 ttaaaataatgagtaattttaaaagggagaagatcaattttcccttgtatatctg 33357089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 13186429 - 13186491
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    ||||||||| |||||||||||| || | ||||||||||||||||||| ||||||||| |||||    
T  13186429 atacatgaaccaatttttaaacgacccctaattgcaaggatgaaatatatatttaagcctaaa 13186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 16388631 - 16388573
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaattatt 87  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||| ||||    
T  16388631 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaactatt 16388573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 39072021 - 39072074
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  39072021 caatttttaaacgacccttgattgcaaggatgaaatacatatttaagcctaaaa 39072074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 40318345 - 40318390
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  40318345 aatttttaaacaacccctaattgcaaggatgaaatacatatttaag 40318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 4406030 - 4406086
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | ||||||||||||||| | ||||| |||||||||||||||||||||||    
T  4406030 atacatggaccaatttttaaacaacccctaattacaaggatgaaatacatatttaag 4406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 31608883 - 31608939
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || |||||||||||||||||||||| ||||||||    
T  31608883 atacatggaccaatttttaaacgacccttaattgcaaggatgaaatacttatttaag 31608939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 34060546 - 34060486
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||| | |||||||||||| ||  |||||||||||||||||||||||||||||| ||||    
T  34060546 tacatggaccaatttttaaacgacgtttaattgcaaggatgaaatacatatttaagcctaa 34060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 36186448 - 36186496
Alignment:
Q  33 ttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||| || ||||||||||||||||||||||||||||||| |||||    
T  36186448 ttttaaacgacccttaattgcaaggatgaaatacatatttaagcctaaa 36186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 13186117 - 13186062
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| |||||||||||| |  | |||||||||||||||||||||||||||||    
T  13186117 tacatgaaccaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 13186062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 16388897 - 16388952
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| |||||||||||  || | |||||||||||||||||||||||||||||    
T  16388897 tacatgaaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaag 16388952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 4994707 - 4994653
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    ||||||||||||||||  | ||||||||| ||||||||||||||||||| |||||    
T  4994707 atcaatttttaaacaatccctaattgcaacgatgaaatacatatttaagcctaaa 4994653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 39071724 - 39071678
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  39071724 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 39071678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 42803598 - 42803644
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||    
T  42803598 caatttttaaacgacttctaattgcaaggatgaaatacatatttaag 42803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 38862943 - 38862988
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  38862943 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 38862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 40318011 - 40317966
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| || | |||||||||||||||||||||||||||||    
T  40318011 aatttttaaacgacccctaattgcaaggatgaaatacatatttaag 40317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 8316711 - 8316655
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | |||||||||||||||||| ||||||||||    
T  8316711 atacatggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaag 8316655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 9065748 - 9065796
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||| ||| | |||||||||||||| ||||||||||||||    
T  9065748 atcaatttttaaataacccctaattgcaaggatggaatacatatttaag 9065796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 34061698 - 34061754
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| |||||||||||||| ||   |||||||||||||| ||||||||||||||    
T  34061698 atacatggatcaatttttaaacgacgtctaattgcaaggatgcaatacatatttaag 34061754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 38862675 - 38862620
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||  || ||||||||  | |||||||||||||||||||||||||||||||    
T  38862675 tacatgaaaaaaattttaaacggcccttaattgcaaggatgaaatacatatttaag 38862620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 4995036 - 4995082
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||  || | |||||||||||||||||||||||||||||    
T  4995036 caatttttaaatgacccctaattgcaaggatgaaatacatatttaag 4995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 8316968 - 8317014
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  8316968 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 8317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12198998 - 12198952
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  12198998 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 12198952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12443426 - 12443380
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  12443426 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 12443380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 20385616 - 20385570
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  20385616 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 20385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 20386810 - 20386856
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  20386810 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 20386856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 23663593 - 23663547
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||| ||||||||||    
T  23663593 caatttttaaacgacccctaattgcaaggatgaaatgcatatttaag 23663547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 23663894 - 23663940
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  23663894 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 23663940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 38956052 - 38956098
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  38956052 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 38956098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 1425101 - 1425056
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||    
T  1425101 caatttttaaacgacccctaattgcaaggatcaaatacatatttaa 1425056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 9065713 - 9065664
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||| || | ||||| ||| ||||||||||||||||||||||    
T  9065713 caatttttaaacgacccctaattacaaagatgaaatacatatttaagtct 9065664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 12199286 - 12199335
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||| |||| |||||  |||||| ||||||||||||||||||    
T  12199286 caatttttaaacgactcctaattataaggatcaaatacatatttaagtct 12199335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 12273233 - 12273278
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||    
T  12273233 caatttttaaacgacccctaattgcaaggatcaaatacatatttaa 12273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 12443714 - 12443763
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||| |||| |||||  |||||| ||||||||||||||||||    
T  12443714 caatttttaaacgactcctaattataaggatcaaatacatatttaagtct 12443763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 30459418 - 30459373
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| || | |||||| ||||||||||||||||||||||    
T  30459418 aatttttaaacgacgcctaattgtaaggatgaaatacatatttaag 30459373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 34176492 - 34176448
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  34176492 caatttttaaacgac-cataattgcaaggatgaaatacatatttaa 34176448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 34177350 - 34177403
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | ||||| ||| ||||||||||||||||||||| ||||    
T  34177350 caatttttaaacgacccctaattacaaagatgaaatacatatttaagtcaaaaa 34177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 23698624 - 23698676
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||| ||||||| ||||||||||||||| |||||    
T  23698624 caatttttaaacgacccctaattacaaggatcaaatacatatttaagcctaaa 23698676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 11434860 - 11434796
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    ||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  11434860 atacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagtctgaaat 11434796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 12081017 - 12081069
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  12081017 aatttttaaacgactcctaattgcaaggatgaaatacatatttaagcctaaaa 12081069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 22617931 - 22617886
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  22617931 caatttttaaacgactcctaattgcaaggatgaaatacatatttaa 22617886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 21627771 - 21627715
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| |||||||||||||| |  ||||||| |||||||||||||||||||||||    
T  21627771 atacatggatcaatttttaaacgatccttaattacaaggatgaaatacatatttaag 21627715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 30804239 - 30804286
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||    
T  30804239 atcaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 30804286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 33647331 - 33647382
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| ||||    
T  33647331 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaa 33647382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 679914 - 679868
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||    
T  679914 caatttttaaacgacccttaattgcaaggatcaaatacatatttaag 679868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 3059636 - 3059682
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  3059636 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 3059682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 30726139 - 30726185
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  30726139 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 30726185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 33517914 - 33517960
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  33517914 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 33517960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 3059301 - 3059260
Alignment:
Q  33 ttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  3059301 ttttaaacgacccttaattgcaaggatgaaatacatatttaa 3059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 8090307 - 8090360
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | |||||||||||||| |||||||||||||| ||||||    
T  8090307 caatttttaaacgacccctaattgcaaggatgtaatacatatttaagcctaaaa 8090360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 12408555 - 12408608
Alignment:
Q  33 ttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaattat 86  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||| ||||||    
T  12408555 ttttaaacaacccctaattgtaaggatgaaatacatatttaagcctataattat 12408608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 17734253 - 17734198
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||| ||| |||||||||||| || | ||||||||||||| |||||||||||||||    
T  17734253 tacaagaaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 17734198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 17734534 - 17734589
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| |||||||||||||| || | |||||| |||||| |||||||||||||||    
T  17734534 tacatggatcaatttttaaacgacccataattgtaaggatcaaatacatatttaag 17734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 30803911 - 30803864
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | || |||||||||||||||||||||||||    
T  30803911 atcaatttttaaacgacacctagttgcaaggatgaaatacatatttaa 30803864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 681108 - 681154
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  681108 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 681154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 8418407 - 8418468
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||| ||| |||||||||||| | || |||||||||||||| |||||||||||||||| ||||    
T  8418407 tacaagaaccaatttttaaacgattcctaattgcaaggatg-aatacatatttaagtcaaaaa 8418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12080684 - 12080638
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||||||||||| |||||||    
T  12080684 caatttttaaacgacccctaattgcaaggatgaaatacaaatttaag 12080638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12407556 - 12407510
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||||    
T  12407556 caatttttaaacgatccttaattgtaaggatgaaatacatatttaag 12407510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 21628093 - 21628139
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||| | || | |||||||||||||||||||||||||||||    
T  21628093 caatttttaagcgacccctaattgcaaggatgaaatacatatttaag 21628139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 26463227 - 26463169
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaattatt 87  Q
    |||||||||||| || | |||||||| |||| ||||||||||||||| |||||| ||||    
T  26463227 caatttttaaacgacccctaattgcagggatcaaatacatatttaagcctaaaaatatt 26463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 30337497 - 30337451
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  30337497 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 30337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 15115369 - 15115341
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  15115369 taattgcaaggatgaaatacatatttaag 15115341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 19892366 - 19892302
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    ||||||| | |||||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  19892366 atacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagtctaaaat 19892302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 5835806 - 5835851
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  5835806 caatttttaaacaactcctaattgcaaggatgaaatacatatttaa 5835851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 5024077 - 5024021
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| |||||||||||||| || | |||||||||||||||||||||||||||||    
T  5024077 atacatgtatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 5024021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 39453348 - 39453292
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatta 85  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||| |||||    
T  39453348 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagtctataatta 39453292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 6150511 - 6150456
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| |||||||||||| || | |||||||||||||||||||||||||||||    
T  6150511 tacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 6150456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 35512494 - 35512544
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtcta 79  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||||    
T  35512494 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagtcta 35512544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 6150801 - 6150854
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    ||||||||||| || | ||||||||||||||||||||||||||||| |||||||    
T  6150801 aatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaat 6150854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 32242622 - 32242667
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  32242622 aatttttaaacaacccctaattgcaaggatgaaatacatatttaag 32242667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 35512196 - 35512151
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  35512196 caatttttaaacgacccttaattgcaaggatgaaatacatatttaa 35512151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14194471 - 14194419
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||    
T  14194471 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaa 14194419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 16083024 - 16082976
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||    
T  16083024 aatttttaaacaacccctaattggaaggatgaaatacatatttaagtct 16082976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 16083317 - 16083369
Alignment:
Q  23 atgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||| |||||||||||| |  |||||||||||||||||||||||||||||||    
T  16083317 atgaaccaatttttaaacgatccttaattgcaaggatgaaatacatatttaag 16083369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 5993937 - 5993886
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| ||||    
T  5993937 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaa 5993886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 11740737 - 11740690
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||    
T  11740737 atcaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 11740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 18247143 - 18247088
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| | |||||||||||| || | |||||||||||||||||||||||||||||    
T  18247143 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 18247088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 21265513 - 21265568
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||| ||| |||||||||||| || |||||||| ||||||||||||||||||||||    
T  21265513 tacaggaaccaatttttaaacgacccttaattgtaaggatgaaatacatatttaag 21265568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 27937377 - 27937424
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||    
T  27937377 atcaatttttaaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 32242292 - 32242245
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||    
T  32242292 atcaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 32242245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 16157235 - 16157281
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  16157235 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 16157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 20814515 - 20814561
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  20814515 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 20814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 20840581 - 20840535
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  20840581 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 20840535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 5024398 - 5024443
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  5024398 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5994259 - 5994304
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaat 64  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||    
T  5994259 atacatgaaccaatttttaaacgacccttaattgcaaggatgaaat 5994304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 10684313 - 10684362
Alignment:
Q  25 gaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||||| ||  |||||||||| ||||||||||||||||||    
T  10684313 gaatcaatttttaaacgacctttaattgcaaagatgaaatacatatttaa 10684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 19517988 - 19518033
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| || | |||||||||||||||||||||||||||||    
T  19517988 aatttttaaactacccctaattgcaaggatgaaatacatatttaag 19518033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 43159194 - 43159239
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  43159194 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 43159239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 17202781 - 17202825
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||| || | |||||||||||||||||||||||||||||    
T  17202781 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 17202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 38442449 - 38442493
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||| || | |||||||||||||||||||||||||||||    
T  38442449 atttttaaacgacccctaattgcaaggatgaaatacatatttaag 38442493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 8322784 - 8322827
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatattt 72  Q
    |||||||||||| || | ||||||||||||||||||||||||||    
T  8322784 caatttttaaacgacccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 37992670 - 37992717
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||| || | |||||||| |||||||||||||||||||||||    
T  37992670 atttttaaacgacccctaattgcatggatgaaatacatatttaagtct 37992717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 38475370 - 38475425
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| | |||||||||||| || | |||||||||||||||||| ||||||||||    
T  38475370 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaag 38475425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 186799 - 186845
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  186799 caatttttaaacgacctctaattgcaaggatgaaatacatatttaag 186845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 3528921 - 3528875
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  3528921 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 3528875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 3529222 - 3529268
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  3529222 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 3529268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 11761797 - 11761751
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  11761797 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 11761751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 11762097 - 11762143
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  11762097 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 11762143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 16156903 - 16156857
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||| ||||||||||||||||||    
T  16156903 caatttttaaacgacccctaattgcaagtatgaaatacatatttaag 16156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 18247460 - 18247502
Alignment:
Q  33 ttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| || | |||||||||||||||||||||||||||||    
T  18247460 ttttaaacgacccctaattgcaaggatgaaatacatatttaag 18247502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 18670250 - 18670204
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | || ||||||||||||||||||||||||||    
T  18670250 caatttttaaacgacccctacttgcaaggatgaaatacatatttaag 18670204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 19892688 - 19892734
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  19892688 caatttttaaacgacctctaattgcaaggatgaaatacatatttaag 19892734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 20840817 - 20840863
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||| ||||||||||||||||||||||    
T  20840817 caatttttaaacgacccctaattgtaaggatgaaatacatatttaag 20840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 24547505 - 24547551
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  24547505 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 24547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 27587196 - 27587150
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  27587196 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 27587150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 27587495 - 27587541
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  27587495 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 27587541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 28269470 - 28269424
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||| |||||||||||||||||||    
T  28269470 caatttttaaacgacccctaattgcaatgatgaaatacatatttaag 28269424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 28770917 - 28770871
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  28770917 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 28770871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 39453679 - 39453725
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||  || | |||||||||||||||||||||||||||||    
T  39453679 caatttttaaatgacccctaattgcaaggatgaaatacatatttaag 39453725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 42265783 - 42265737
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||    
T  42265783 caatttttaaacgacccctaattgcagggatgaaatacatatttaag 42265737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 11047816 - 11047861
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | || |||||||||||||||||||||||||    
T  11047816 caatttttaaacgacccctacttgcaaggatgaaatacatatttaa 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 13362608 - 13362653
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||| ||||||||||||||||||    
T  13362608 caatttttaaacgacccctaattgcaatgatgaaatacatatttaa 13362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 20814184 - 20814131
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| ||   |||||| |||||||||||||||||||||| ||||||    
T  20814184 caatttttaaacgacctctaattgtaaggatgaaatacatatttaagcctaaaa 20814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 21257541 - 21257586
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | |||||||| |||||||||||||||||||    
T  21257541 caatttttaaacgacccctaattgcagggatgaaatacatatttaa 21257586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 23311862 - 23311817
Alignment:
Q  126 attttttaacgtgggttaactcacgttgccacttttaatattggtt 171  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||||    
T  23311862 attttttaacgtaagttaactcacgttgacacttttaagattggtt 23311817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 75
Target Start/End: Original strand, 42265889 - 42265918
Alignment:
Q  46 ttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||||||||||||||||||    
T  42265889 ttaattgcaaggatgaaatacatatttaag 42265918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 13962912 - 13962860
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||| ||||| ||||||||| |||||    
T  13962912 caatttttaaacgacccctaattgcaaggataaaatatatatttaagcctaaa 13962860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 27937085 - 27937057
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  27937085 taattgcaaggatgaaatacatatttaag 27937057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 45010974 - 45011037
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||||| |||||||||||| || | ||||||||||||||||||||||||||||| ||||||    
T  45010974 atacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaa 45011037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 40380054 - 40380110
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||    
T  40380054 atacatggaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaag 40380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 42019655 - 42019599
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || |||||||||||||||||||||||||||||||    
T  42019655 atacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaag 42019599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 24388867 - 24388816
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  24388867 caatttttaaacgacccataattgcaaggatgaaatacatatttaagtctaa 24388816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 10936174 - 10936220
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  10936174 caatttttaaacaacccctaattgcaaggatgaaatacatatttaag 10936220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 27396975 - 27397029
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||||    
T  27396975 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaat 27397029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 28105548 - 28105498
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  28105548 aatttttaaacgacccttaattgcaaggatgaaatacatatttaagcctaa 28105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 42019977 - 42020022
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  42019977 caatttttaaacaacccctaattgcaaggatgaaatacatatttaa 42020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5457287 - 5457339
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||    
T  5457287 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaa 5457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 24389155 - 24389211
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | |||||||||||||||||||||||||||||    
T  24389155 atacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 24389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 17102359 - 17102422
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||| | |||||||||||| || | ||||||||||||| ||||||||||||||| ||||||    
T  17102359 atacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaaa 17102422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 28469058 - 28469012
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  28469058 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 28469012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 28469388 - 28469434
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  28469388 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 28469434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 32299085 - 32299131
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |||| ||||||||||||| |||||||||||||||    
T  32299085 caatttttaaacgactcctaattgcaaggatcaaatacatatttaag 32299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 42362498 - 42362452
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  42362498 caatttttaaacgacacctaattgcaaggatgaaatacatatttaag 42362452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 28557387 - 28557432
Alignment:
Q  250 ttaaaataatgagtaattttaaaagagagaagatcaattttccctt 295  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||    
T  28557387 ttaaaagaatgagtaattttaaaagggagaagaacaattttccctt 28557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 37656900 - 37656855
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| | || ||||||||||||||||||||||||||||    
T  37656900 caatttttaaacgattcctaattgcaaggatgaaatacatatttaa 37656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 17886860 - 17886916
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| |||||||||||||  |  | |||||||||||||||||||||||||||||    
T  17886860 atacatggatcaatttttaaatgatccctaattgcaaggatgaaatacatatttaag 17886916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 37657215 - 37657263
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| |  | |||||||||||||||||||||||||||||    
T  37657215 atcaatttttaaacgatccctaattgcaaggatgaaatacatatttaag 37657263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 42731797 - 42731845
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| || | ||||| |||||||||||||||||||||||    
T  42731797 atcaatttttaaacgacccctaattacaaggatgaaatacatatttaag 42731845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 48788851 - 48788799
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | |||||||||| |||||||||||||||||| |||||    
T  48788851 caatttttaaacgacccctaattgcaagaatgaaatacatatttaagcctaaa 48788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 40379817 - 40379774
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatattt 72  Q
    |||||||||||| || | ||||||||||||||||||||||||||    
T  40379817 caatttttaaacgacccctaattgcaaggatgaaatacatattt 40379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 2640226 - 2640180
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||| ||||||||||||||||||||||    
T  2640226 caatttttaaacgacccctaattgtaaggatgaaatacatatttaag 2640180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 6253519 - 6253473
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  6253519 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 6253473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 6253820 - 6253866
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  6253820 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 6253866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 6571061 - 6571015
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  6571061 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 6571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 10935842 - 10935796
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||||||||||| |||||||    
T  10935842 caatttttaaacgacccctaattgcaaggatgaaatacacatttaag 10935796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 17102068 - 17102022
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  17102068 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 17102022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 29141556 - 29141602
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  29141556 caatttttaaacgacctctaattgcaaggatgaaatacatatttaag 29141602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 32053189 - 32053135
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatta 85  Q
    |||||||||| || | ||||| ||||||||||||||||||||||| || ||||||    
T  32053189 atttttaaacgacccataattacaaggatgaaatacatatttaagccttaaatta 32053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 42731467 - 42731421
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||||| |||||||||||||    
T  42731467 caatttttaaacgacccctaattgcaaggatgagatacatatttaag 42731421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 27992088 - 27992133
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||    
T  27992088 caatttttaaacgacccctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 20426710 - 20426762
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| ||   |||||||| |||||||||||||||||||| |||||    
T  20426710 caatttttaaacgacctctaattgcagggatgaaatacatatttaagcctaaa 20426762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 27396687 - 27396631
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | ||||||||||||  | | ||||| |||||||||||||||||||||||    
T  27396687 atacatggaccaatttttaaacggcccctaattacaaggatgaaatacatatttaag 27396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 27991789 - 27991741
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| ||||| || | ||||||||||||| |||||||||||||||    
T  27991789 atcaatttctaaacgacccctaattgcaaggatcaaatacatatttaag 27991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 24411726 - 24411780
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  24411726 atcaatttttaaacgacccttaattgcaaggatgaaatacatatttaagcctaaa 24411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 15508052 - 15508105
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  15508052 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagtctaaaa 15508105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 39539298 - 39539349
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  39539298 caatttttaaacgacccttaattgcaaggatgaaatacatatttaagcctaa 39539349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 14801784 - 14801738
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  14801784 caatttttaaacgactcctaattgcaaggatgaaatacatatttaag 14801738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 15507721 - 15507675
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  15507721 caatttttaaacgacccttaattgcaaggatgaaatacatatttaag 15507675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 17355973 - 17355927
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  17355973 caatttttaaacgactcctaattgcaaggatgaaatacatatttaag 17355927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 34765751 - 34765806
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||| |||||||||||| || | ||||||||||||| |||||||||||||||    
T  34765751 tacatgaaccaatttttaaacgacccctaattgcaaggataaaatacatatttaag 34765806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 35028056 - 35028001
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||| ||| |||||||||||| || | ||||||||||||||||||||||||||||    
T  35028056 atacaggaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 35028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 18831697 - 18831743
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  18831697 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 18831743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 24411406 - 24411356
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtcta 79  Q
    |||||||||||| || | ||||||| |||||||||||||||||||||||||    
T  24411406 caatttttaaactacccctaattgctaggatgaaatacatatttaagtcta 24411356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 44967117 - 44967063
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||||| ||||    
T  44967117 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagtcttaaat 44967063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 46661294 - 46661340
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  46661294 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 46661340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 50419017 - 50419071
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| |||||||    
T  50419017 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaaat 50419071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 51692899 - 51692945
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  51692899 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 51692945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 53701862 - 53701812
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtc 77  Q
    |||||||||||||| || | ||||||||||||||||||| |||||||||||    
T  53701862 atcaatttttaaacgacccctaattgcaaggatgaaatagatatttaagtc 53701812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 54435468 - 54435530
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||| |||||||||||||| || | |||||||||| | |||||||||||||||| ||||||    
T  54435468 tacatggatcaatttttaaacgacacctaattgcaagcacgaaatacatatttaagcctaaaa 54435530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 43155577 - 43155532
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||    
T  43155577 caatttttaaacgacccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 54086743 - 54086698
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  54086743 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 54086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 7451882 - 7451830
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| |||||    
T  7451882 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaa 7451830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 10781854 - 10781910
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | ||||||||||||| |||||||||||||||    
T  10781854 atacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 10781910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 13058085 - 13058033
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| |||||    
T  13058085 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaa 13058033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 17356302 - 17356350
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtc 77  Q
    |||||||||||| || | |||||| ||||||||||||||||||||||||    
T  17356302 caatttttaaacgacccgtaattggaaggatgaaatacatatttaagtc 17356350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 23613656 - 23613704
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| || | ||||||||||||| |||||||||||||||    
T  23613656 atcaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 23613704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 24711460 - 24711512
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| |||||    
T  24711460 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaa 24711512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 34765426 - 34765382
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||| || ||||||||||||||| |||||||||||||||    
T  34765426 atttttaaacgacccttaattgcaaggataaaatacatatttaag 34765382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 51692603 - 51692555
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| ||   |||||||||||||||||||||||||||||    
T  51692603 atcaatttttaaacgacctctaattgcaaggatgaaatacatatttaag 51692555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 53129884 - 53129932
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| || | | |||||||||||||||||||||||||||    
T  53129884 atcaatttttaaacgacccctgattgcaaggatgaaatacatatttaag 53129932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 54087075 - 54087127
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||| ||| |||||||||||||||||||||||||    
T  54087075 caatttttaaacgacccctaattacaatgatgaaatacatatttaagtctaaa 54087127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 7452183 - 7452238
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatt 84  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| | ||||||    
T  7452183 caatttttaaacgacccctaattgcaaggatcaaatacatatttaagccaaaaatt 7452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 11108218 - 11108265
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||    
T  11108218 atcaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 11108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 23613366 - 23613311
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| | |||||||||||| || | ||||||||||||| |||||||||||||||    
T  23613366 tacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaag 23613311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 148135 - 148181
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||    
T  148135 caatttttaaacgacccctaattgcagggatgaaatacatatttaag 148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 10780761 - 10780715
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  10780761 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 10780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 10974370 - 10974324
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  10974370 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 10974324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 24349722 - 24349676
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  24349722 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 24349676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 24350812 - 24350858
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  24350812 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 24350858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 24711159 - 24711113
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  24711159 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 24711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 35028378 - 35028424
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||  || | |||||||||||||||||||||||||||||    
T  35028378 caatttttaaaatacccctaattgcaaggatgaaatacatatttaag 35028424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 48528533 - 48528487
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  48528533 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 48528487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 49879255 - 49879209
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  49879255 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 49879209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 50418716 - 50418670
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  50418716 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 50418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 53702178 - 53702224
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||   ||||||||| |||||||||||||||||||    
T  53702178 caatttttaaacaacctctaattgcaaagatgaaatacatatttaag 53702224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 37248585 - 37248630
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||    
T  37248585 caatttttaaacgacccctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 37976531 - 37976584
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||||||||||| || | ||||||| | ||||||||||||||||||| ||||    
T  37976531 atcaatttttaaacgacccctaattgccatgatgaaatacatatttaagcctaa 37976584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 1179170 - 1179226
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | ||||||||| ||| |||||||||||||||    
T  1179170 atacatggaccaatttttaaacgacccctaattgcaaagataaaatacatatttaag 1179226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 16006173 - 16006221
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtc 77  Q
    |||||||||||| || | |||||||||| || |||||||||||||||||    
T  16006173 caatttttaaacgacccctaattgcaagaatcaaatacatatttaagtc 16006221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 37248284 - 37248236
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtc 77  Q
    |||||||||||| || | ||||||||||| | |||||||||||||||||    
T  37248284 caatttttaaacgacccctaattgcaaggttcaaatacatatttaagtc 37248236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 52909651 - 52909679
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  52909651 taattgcaaggatgaaatacatatttaag 52909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 54713646 - 54713618
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  54713646 taattgcaaggatgaaatacatatttaag 54713618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 36480098 - 36480147
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  36480098 caatttttaaacgacccttaattgcaaggatgaaatacatatttaagtct 36480147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 10713103 - 10713149
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  10713103 caatttttaaacgacccttaattgcaaggatgaaatacatatttaag 10713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 36382507 - 36382553
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  36382507 caatttttaaacgacccttaattgcaaggatgaaatacatatttaag 36382553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 37895395 - 37895349
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  37895395 caatttttaaacgacccttaattgcaaggatgaaatacatatttaag 37895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 2318880 - 2318936
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||| |||||||||||| || | |||||| ||||||||||||||||||||||    
T  2318880 atacatgaaccaatttttaaacgacccctaattggaaggatgaaatacatatttaag 2318936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 39423893 - 39423941
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||    
T  39423893 atcaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 39423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 6588741 - 6588686
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||| | |||||||||||| || | ||||||||||||||||||||||||||||    
T  6588741 atacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 6588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 3555298 - 3555252
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  3555298 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 3555252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 7152082 - 7152144
Alignment:
Q  126 attttttaacgtgggttaactcacgttgccacttttaatattggttcaattattttttaaacc 188  Q
    |||||| | |||| |||||||||||||  |||||||||||| |||||||||| ||||||||||    
T  7152082 atttttcagcgtgagttaactcacgttaacacttttaatatcggttcaattactttttaaacc 7152144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 34448175 - 34448221
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||    
T  34448175 caatttttaaacaacccctaattgcaaggatgaaatacatgtttaag 34448221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 36755468 - 36755514
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  36755468 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 36755514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 15848458 - 15848519
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    |||||| || |||||||||||| || | |||||||||||||||||||| |||||||| ||||    
T  15848458 atacataaaccaatttttaaacgacccctaattgcaaggatgaaatacttatttaagcctaa 15848519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 10712771 - 10712719
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| |  | ||||||||||||||||||||||| |||||||||||    
T  10712771 caatttttaaacgaaccctaattgcaaggatgaaatacatacttaagtctaaa 10712719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 21370572 - 21370628
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| |||||||||||||| ||   ||||| |||||||||||||||||||||||    
T  21370572 atacatggatcaatttttaaacgacctataattacaaggatgaaatacatatttaag 21370628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 44713843 - 44713799
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatattta 73  Q
    |||||||||||| || ||||||| |||||||||||||||||||||    
T  44713843 caatttttaaacgacccttaattacaaggatgaaatacatattta 44713799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 36479775 - 36479716
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaa-ggatgaaatacatatttaagtct 78  Q
    |||||| | |||||||||||| || | ||||||||| |||||||||||||||||||||||    
T  36479775 tacatggaccaatttttaaacgacccctaattgcaaaggatgaaatacatatttaagtct 36479716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 39498649 - 39498712
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||| | |||||||||||| |  | ||||||||||||| ||||||||||||||| ||||||    
T  39498649 atacatggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagcctaaaa 39498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 2318206 - 2318161
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || || ||||||||||||||||||||||||||||    
T  2318206 caatttttaaactaccct-aattgcaaggatgaaatacatatttaag 2318161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 11163403 - 11163449
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  11163403 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 11163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 15848136 - 15848090
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||| ||||    
T  15848136 caatttttaaacgacccctaattgcaaggatgaaatacatatataag 15848090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 16099404 - 16099450
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  16099404 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 16099450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 30481636 - 30481758
Alignment:
Q  87 tcattctcttaactcaacggcagtgtactcttattcaacattttttaacgtgggttaactcacgttgccacttttaatattggttcaattattttttaaa 186  Q
    |||||||||||| ||| ||  |||  |||| | ||| |||||||||| |||| ||||||||||  || ||||||||| ||  ||||||| |||||||||     
T  30481636 tcattctcttaattcatcgcgagttaactcatgttcgacattttttagcgtgagttaactcacactggcacttttaagatcagttcaataattttttaag 30481735  T
Q  187 ccaatttaactgattttaaaagt 209  Q
    |||||| |||  || ||||||||    
T  30481736 ccaattcaacctatcttaaaagt 30481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 30729669 - 30729623
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  30729669 caatttttaaacgacgtctaattgcaaggatgaaatacatatttaag 30729623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 37895730 - 37895772
Alignment:
Q  32 tttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||| || | ||||||||||||||||||||||||||||    
T  37895730 tttttaaacgacccataattgcaaggatgaaatacatatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 22051374 - 22051419
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||   |||||||||| ||||||||||||||||||    
T  22051374 aatttttaaacaacctctaattgcaagaatgaaatacatatttaag 22051419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 44045382 - 44045435
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | |||||||| |||| ||||||||||||||| ||||||    
T  44045382 caatttttaaacgacccctaattgcagggatcaaatacatatttaagcctaaaa 44045435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 25231218 - 25231274
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | |||||||| |||| |||||||||||||||    
T  25231218 atacatggaccaatttttaaacgacccctaattgcagggattaaatacatatttaag 25231274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 44714142 - 44714193
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||||||| || | ||||||||||||||||| ||||||||||| ||||||    
T  44714142 aatttttaaacgacccctaattgcaaggatgaaa-acatatttaagcctaaaa 44714193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 19017680 - 19017631
Alignment:
Q  26 aatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  19017680 aatcaatttttaaacaacccctaattgcaaggatgaaatacatatttaag 19017631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 34464820 - 34464881
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||| | ||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  34464820 tacatggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcctaaa 34464881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 30711377 - 30711329
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  30711377 atcaatttttaaacaacccctaattgcaaggatgaaatacatatttaag 30711329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 6367942 - 6367988
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  6367942 caatttttaaacgacccttaattgcaaggatgaaatacatatttaag 6367988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 23209707 - 23209761
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||||    
T  23209707 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaat 23209761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 36694628 - 36694674
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  36694628 caatttttaaacaacacctaattgcaaggatgaaatacatatttaag 36694674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 36710729 - 36710775
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  36710729 caatttttaaacaacacctaattgcaaggatgaaatacatatttaag 36710775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 30711707 - 30711760
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| ||||||    
T  30711707 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaaa 30711760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 5735081 - 5735137
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||| |||||||||||| | || |||||||| ||||||||||||||||||||    
T  5735081 atacatgaaccaatttttaaacgattcctaattgcagggatgaaatacatatttaag 5735137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 34464506 - 34464442
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatt 84  Q
    |||||| | |||||||||||| || | ||||||||||||||||||||||||||||| | ||||||    
T  34464506 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccaaaaatt 34464442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 13914438 - 13914493
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| | |||||||||||||||   |||||||||||||||||||||||||||||    
T  13914438 tacatggaccaatttttaaacaacctctaattgcaaggatgaaatacatatttaag 13914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 40439566 - 40439617
Alignment:
Q  27 atcaatttttaaacaactc-ttaattgcaaggatgaaatacatatttaagtc 77  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||    
T  40439566 atcaatttttaaacgacccattaattgcaaggatgaaatacatatttaagtc 40439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 6367610 - 6367564
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  6367610 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 6367564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 17661900 - 17661854
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  17661900 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 17661854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 19515867 - 19515821
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  19515867 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 19515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 24009623 - 24009577
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  24009623 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 24009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 32917640 - 32917686
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||    
T  32917640 caatttttaaacgacccttaattgcaagaatgaaatacatatttaag 32917686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 35473679 - 35473625
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaat 83  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||| |||||||    
T  35473679 caatttttaaacgacccctaattgcaaggattaaatacatatttaagcctaaaat 35473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 36694330 - 36694284
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  36694330 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 36694284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 36710431 - 36710385
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  36710431 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 36710385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 40772555 - 40772509
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  40772555 caatttttaaacgacccataattgcaaggatgaaatacatatttaag 40772509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 43759204 - 43759254
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||| || | ||||||||||||||||||||||||||||| |||||    
T  43759204 atttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaa 43759254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 35152391 - 35152338
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| ||   ||||||||||||||||||||||||||||| ||||||    
T  35152391 caatttttaaacgacctctaattgcaaggatgaaatacatatttaagcctaaaa 35152338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 35152711 - 35152756
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| || | |||||||||||||||||||||||||||||    
T  35152711 aatttttaaacgacccctaattgcaaggatgaaatacatatttaag 35152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 37578240 - 37578195
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  37578240 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 37578195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 40435393 - 40435348
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  40435393 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 40435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 42248521 - 42248472
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    |||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  42248521 caatttttaaacgaccactaattgcaaggatgaaatacatatttaagtct 42248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 48779500 - 48779545
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||    
T  48779500 aatttttaagcgactcctaattgcaaggatgaaatacatatttaag 48779545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 1841507 - 1841455
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| ||||||||||||||  ||||||||||| |||||| |||||    
T  1841507 caatttttaaacgactcttaattgcaaatatgaaatacatgtttaagcctaaa 1841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 7231627 - 7231675
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| |||| ||||| ||||||| |||||||||||||||    
T  7231627 atcaatttttaaacgactcctaattacaaggataaaatacatatttaag 7231675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 13914115 - 13914063
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||||||| || | ||||||||||||||||||||| ||||||| ||||||    
T  13914115 aatttttaaacgacccctaattgcaaggatgaaatacacatttaagcctaaaa 13914063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 42533071 - 42533027
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||| || | ||||||||||||||||||||||||||||    
T  42533071 aatttttaaacgacccctaattgcaaggatgaaatacatatttaa 42533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 46899119 - 46899063
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| || | |||||||| ||||||||||||||||||||    
T  46899119 atacatggaccaatttttaaacgacccctaattgcatggatgaaatacatatttaag 46899063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 17692567 - 17692610
Alignment:
Q  31 atttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||| || | ||||||||||||||||||||||||||||    
T  17692567 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 17692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 49723096 - 49723147
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatat 70  Q
    ||||||| | |||||||||||| || | ||||||||||||||||||||||||    
T  49723096 atacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 1103841 - 1103887
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||    
T  1103841 caatttttaaacgacctttaattgcaaggatgaaatatatatttaag 1103887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 4960588 - 4960542
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||| |||||||||||||||||||    
T  4960588 caatttttaaacgacccctaattgcaatgatgaaatacatatttaag 4960542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 5734058 - 5734012
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||| ||||||||||||||||    
T  5734058 caatttttaaacgacccctaattgcaaggacgaaatacatatttaag 5734012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 13300284 - 13300330
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||| |||||||||||||||||||    
T  13300284 caatttttaaacgacgcctaattgcaatgatgaaatacatatttaag 13300330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 17662230 - 17662276
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |  ||||||||||||||||||||||||||||    
T  17662230 caatttttaaacgaccccaaattgcaaggatgaaatacatatttaag 17662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 25647932 - 25647886
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  25647932 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 25647886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 26024772 - 26024818
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  26024772 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 26024818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 34850445 - 34850491
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  34850445 caatttttaaacgacccctaattgcaaggattaaatacatatttaag 34850491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 37578572 - 37578618
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || |  ||||||||||||||||||||||||||||    
T  37578572 caatttttaaacgacccccaattgcaaggatgaaatacatatttaag 37578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 41098781 - 41098735
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||| ||||||||||||||||||    
T  41098781 caatttttaaacgacccctaattgcaagaatgaaatacatatttaag 41098735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 46899980 - 46900026
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||  || |||||||||| ||||||||||||||||||||    
T  46899980 caatttttaaatgacccttaattgcatggatgaaatacatatttaag 46900026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 6518177 - 6518222
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| || | ||||||||||||||||||| |||||||||    
T  6518177 aatttttaaacgacccctaattgcaaggatgaaatatatatttaag 6518222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19017999 - 19018060
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaa 80  Q
    ||||||| | |||||||||||| ||   ||||||||||||| ||||||||||||||| ||||    
T  19017999 atacatggaccaatttttaaacgacctgtaattgcaaggataaaatacatatttaagcctaa 19018060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 40210750 - 40210799
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtct 78  Q
    ||||||||||||  | | ||||||||| ||||||||||||||||||||||    
T  40210750 caatttttaaacggcccctaattgcaatgatgaaatacatatttaagtct 40210799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 7820984 - 7820956
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  7820984 taattgcaaggatgaaatacatatttaag 7820956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 14879028 - 14878980
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacat 68  Q
    |||||||| |||||||||||| || | ||||||||||||| ||||||||    
T  14879028 tacatgaaccaatttttaaacgacccctaattgcaaggataaaatacat 14878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 19322950 - 19322894
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||  ||||||||||| || | |||||  ||||||||||||||||||||||    
T  19322950 atacatgaacgaatttttaaacgacccgtaattataaggatgaaatacatatttaag 19322894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 23209408 - 23209365
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||| || || |||||||||||||||||||||||||||    
T  23209408 aatttttaaacgaccct-aattgcaaggatgaaatacatatttaa 23209365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 40772857 - 40772885
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  40772857 taattgcaaggatgaaatacatatttaag 40772885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 2796467 - 2796523
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  2796467 atacatggaccaatttttaaacaactcctaattgcaaggatgaagtacatatttaag 2796523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 26463682 - 26463635
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  26463682 atcaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 26463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 42343101 - 42343156
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||    
T  42343101 atacatggatcaatttttaaacgacccttaattacaaggatgaaatacatatttaa 42343156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 53756801 - 53756747
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||||||||    
T  53756801 tacatgaatcaatttttaaacgacccctaattgcaaagatgaaatacatatttaa 53756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 33689750 - 33689811
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||| |||||||||||| || | ||||||||| ||||||||||||||||||| |||||    
T  33689750 tacatgaaccaatttttaaacgacccctaattgcaaagatgaaatacatatttaagcctaaa 33689811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 23458359 - 23458411
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||||    
T  23458359 caatttttaaacgacccataattgcaaggatgaaatacatatttaagcctaaa 23458411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 33689430 - 33689375
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatt 84  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| || |||||    
T  33689430 caatttttaaacgacccctaattgcaaggatgaaatacatatttaagccttaaatt 33689375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 40758204 - 40758149
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||| | |||||||||||| || | |||||||||||||||||||||||||||||    
T  40758204 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaag 40758149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 9292291 - 9292241
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtcta 79  Q
    |||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  9292291 caatttttaaacgatccctaattgcaaggatgaaatacatatttaagtcta 9292241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 9294338 - 9294384
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  9294338 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 9294384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 40033836 - 40033882
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  40033836 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 40033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 36150575 - 36150530
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||||||||||||||||||    
T  36150575 caatttttaaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 41558056 - 41558003
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    |||||||||||| || | |||||||||| |||||||||||||||||| ||||||    
T  41558056 caatttttaaacgacccataattgcaagaatgaaatacatatttaagcctaaaa 41558003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 43384664 - 43384709
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||||||| | || |||||||||||||||||||||||||||||    
T  43384664 aatttttaaacgattcctaattgcaaggatgaaatacatatttaag 43384709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 36418058 - 36418114
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||| ||| |||||||||||| || | ||||| |||||||||||||||||||||||    
T  36418058 atacaggaaccaatttttaaacgacccctaattacaaggatgaaatacatatttaag 36418114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 40758490 - 40758542
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaa 81  Q
    |||||||||||  || | ||||||||||||||||||||||||||||| |||||    
T  40758490 caatttttaaatgacccctaattgcaaggatgaaatacatatttaagcctaaa 40758542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 42342848 - 42342784
Alignment:
Q  20 tacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaatt 84  Q
    |||||| | |||||||||||| || | |||||| |||||||||||||||||||||| ||| ||||    
T  42342848 tacatggaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcctataatt 42342784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 53757093 - 53757149
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    ||||||| | |||||||||||| |||  |||||||||| ||||||||||||||||||    
T  53757093 atacatggaccaatttttaaacgacttctaattgcaagaatgaaatacatatttaag 53757149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 23458027 - 23457988
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacat 68  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  23458027 caatttttaaacgacccttaattgcaaggatgaaatacat 23457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 40033577 - 40033526
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatat 70  Q
    ||||||| |||||||||||||| |  ||||||||||||||||||||| ||||    
T  40033577 atacatggatcaatttttaaacgatccttaattgcaaggatgaaatatatat 40033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 46475158 - 46475205
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||||| || | |||||| |||||||||||||||||||||    
T  46475158 atcaatttttaaacgacccctaattgtaaggatgaaatacatatttaa 46475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 3850507 - 3850553
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||    
T  3850507 caatttttaaacgacccctaattgcagggatgaaatacatatttaag 3850553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 19741272 - 19741318
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  19741272 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 19741318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 34142598 - 34142644
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  34142598 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 34142644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41558252 - 41558306
Alignment:
Q  19 atacatgaatcaatttttaaacaactcttaattgcaaggatgaaatacatattta 73  Q
    ||||||| || ||||||||||| || | |||||||| ||||||||||||||||||    
T  41558252 atacatggattaatttttaaacgacccctaattgcagggatgaaatacatattta 41558306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 46474863 - 46474818
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||| ||||||||||||||||||    
T  46474863 caatttttaaacgacccctaattgcaaagatgaaatacatatttaa 46474818  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 21783443 - 21783403
Alignment:
Q  34 tttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||| || ||||||| ||||||||||||||||||||||    
T  21783443 tttaaacgacccttaattacaaggatgaaatacatatttaa 21783403  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 26463984 - 26464012
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  26463984 taattgcaaggatgaaatacatatttaag 26464012  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 35712074 - 35712046
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  35712074 taattgcaaggatgaaatacatatttaag 35712046  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 36150610 - 36150642
Alignment:
Q  47 taattgcaaggatgaaatacatatttaagtcta 79  Q
    |||||||||| ||||||||||||||||||||||    
T  36150610 taattgcaagaatgaaatacatatttaagtcta 36150642  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 41989584 - 41989612
Alignment:
Q  47 taattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||||||||||||||||||    
T  41989584 taattgcaaggatgaaatacatatttaag 41989612  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 37943 - 37989
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  37943 caatttttaaacgactcctaattgcaaggatgaaatacatatttaag 37989  T

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Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 14476 - 14424
Alignment:
Q  30 aatttttaaacaactcttaattgcaaggatgaaatacatatttaagtctaaaa 82  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||    
T  14476 aatttttaaacgactcctaattgcaatgatgaaatacatatttaagcctaaaa 14424  T

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Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 14770 - 14816
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||| ||||||||||    
T  14770 caatttttaaacgacccctaattgcaaggatgaaattcatatttaag 14816  T

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Target: scaffold0707 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 6459 - 6505
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  6459 caatttttaaacgacccctaattgcaaggatgaaatacatatttaag 6505  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 140021 - 140066
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||    
T  140021 caatttttaaacaacccctaattgcaaggatcaaatacatatttaa 140066  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 139720 - 139675
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||    
T  139720 caatttttaaacgacccctaattgcaaggatcaaatacatatttaa 139675  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 69013 - 68967
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||  || | |||||||||||||||||||||||||||||    
T  69013 caatttttaaatgacccctaattgcaaggatgaaatacatatttaag 68967  T

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Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 69345 - 69391
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||    
T  69345 caatttttaaacgacatctaattgcaaggatgaaatacatatttaag 69391  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 2121 - 2167
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  2121 caatttttaaacgacccctaattgcaaggatcaaatacatatttaag 2167  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 19905 - 19860
Alignment:
Q  29 caatttttaaacaactcttaattgcaaggatgaaatacatatttaa 74  Q
    |||||||||||| || | |||||||||||| |||||||||||||||    
T  19905 caatttttaaacgacccataattgcaaggacgaaatacatatttaa 19860  T

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Target: scaffold0775 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 5012 - 4964
Alignment:
Q  27 atcaatttttaaacaactcttaattgcaaggatgaaatacatatttaag 75  Q
    |||||||||||||| || | |||||| | ||||||||||||||||||||    
T  5012 atcaatttttaaacgacccctaattgtagggatgaaatacatatttaag 4964  T

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