View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5268_low_27 (Length: 238)
Name: NF5268_low_27
Description: NF5268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5268_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37581349 - 37581564
Alignment:
| Q |
1 |
ctaaattaaagaaattatgaaatgtgttgaaaatcaattaaagaggtgattgaaatattatacaaatatatctatcaagtcattcctnnnnnnnnnnnnn |
100 |
Q |
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| T |
37581349 |
ctaaattaaagaaattatgaaatgtgttgaaaatcaattaaagaggtgattgaaatattatacaactatatctatcaagtcattccttatatatatata- |
37581447 |
T |
|
| Q |
101 |
nnnnngatttagccttccaaaatcttcctttacccttaaatccatccattagttaagacaaatatacaattttatagatcattttgaatattgatgacat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37581448 |
-----gatttagccttccaaaatcttcctttacccttaaatccatccattagttaagacaaatatacaattttatagatcattttgaatattgataacat |
37581542 |
T |
|
| Q |
201 |
ggtggggtgactaacctggatg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
37581543 |
ggtggggtgactaacctggatg |
37581564 |
T |
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