View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5268_low_6 (Length: 428)
Name: NF5268_low_6
Description: NF5268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5268_low_6 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 410; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 1 - 418
Target Start/End: Complemental strand, 1857117 - 1856700
Alignment:
| Q |
1 |
aaaatctgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatat |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1857117 |
aaaatccgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatat |
1857018 |
T |
 |
| Q |
101 |
gacagagcctcagctacctctgcggctatcttaagacgagtcttccaagttggatcattcgtcttaccttttgtgtgaataaattcagaaagagtaccat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1857017 |
gacagagcctcagctacctctgcggctatcttaagacgagtcttccaagttggatcattcgtcttaccttttgtgtgaataaattcagaaagagtaccat |
1856918 |
T |
 |
| Q |
201 |
tgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatccac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1856917 |
tgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacatttctgtgatttatttgagagacaacatccac |
1856818 |
T |
 |
| Q |
301 |
ctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgtacca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1856817 |
ctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgtacca |
1856718 |
T |
 |
| Q |
401 |
aaacctcctttacctatg |
418 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
1856717 |
aaacctcctttacctatg |
1856700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 1815927 - 1816344
Alignment:
| Q |
1 |
aaaatctgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatat |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||| |||||| |
|
|
| T |
1815927 |
aaaatctgacactttagcggtgttggttccatctaagagaatgttagcactcttgacatctctatggataatgggtattgaggcagctgaatgcagatat |
1816026 |
T |
 |
| Q |
101 |
gacagagcctcagctacctctgcggctatcttaagacgagtcttccaagttggatcattcgtcttaccttttgtgtgaataaattcagaaagagtaccat |
200 |
Q |
| |
|
|||||||| |||||||||| | |||||| |||||||||| |||||||| |||| ||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
1816027 |
gacagagctccagctacctcaacagctatcctaagacgagttttccaagtaagatcgttcgtcttaccttgtgtgcgaagaaattcagaaagagtaccat |
1816126 |
T |
 |
| Q |
201 |
tgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatccac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1816127 |
tgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccccaagagtttgaccacattcctgtgatttatttgagagacaacatccac |
1816226 |
T |
 |
| Q |
301 |
ctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgtacca |
400 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1816227 |
ctcgttaatgaattgttcaatttggctttcgtctattgttttggactttttgatagccacaattctattatcatcaagttcccctttgaaaactgtacca |
1816326 |
T |
 |
| Q |
401 |
aaacctcctttacctatg |
418 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
1816327 |
aaacctcctctacctatg |
1816344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 411
Target Start/End: Complemental strand, 1868715 - 1868302
Alignment:
| Q |
1 |
aaaatctgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatat |
100 |
Q |
| |
|
|||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1868715 |
aaaatccgatactttggcggtgttggttctatctaagagaatgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtagatat |
1868616 |
T |
 |
| Q |
101 |
gacagagcctcagctacctctgcggctatcttaagacgagtcttccaagttggatcatt---cgtcttaccttttgtgtgaataaattcagaaagagtac |
197 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||| ||||| ||| || ||| | | |||| || |||||| ||||| ||||||| || | |
|
|
| T |
1868615 |
gacaaagcttcagctacctctgcggctatcttaagacgagttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgc |
1868516 |
T |
 |
| Q |
198 |
cattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatc |
297 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||| |||||||||||||||| |||| | |
|
|
| T |
1868515 |
cattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgagagagaacaac |
1868416 |
T |
 |
| Q |
298 |
cacctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgta |
397 |
Q |
| |
|
|||||||||||||||||| || ||||||||| | |||||| |||| || |||||||||||||| ||||| |||||||| || |||||| |||| ||| |
|
|
| T |
1868415 |
cacctcattaatgaattgatcgatttggcttctatctattatttttgattttttgatagcaacgattcttttatcatctagaagtcctttgaaaacggta |
1868316 |
T |
 |
| Q |
398 |
ccaaaacctccttt |
411 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
1868315 |
ccaaaaccaccttt |
1868302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 411
Target Start/End: Complemental strand, 1843106 - 1842693
Alignment:
| Q |
1 |
aaaatctgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatat |
100 |
Q |
| |
|
||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |
|
|
| T |
1843106 |
aaaatctgatactttggctgtgttggttctatctaagagaatgttatcactcttgacatctctatggattattggtattgaggcatatgaatgtagatat |
1843007 |
T |
 |
| Q |
101 |
gacagagcctcagctacctctgcggctatcttaagacgagtcttccaagttggatcatt---cgtcttaccttttgtgtgaataaattcagaaagagtac |
197 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||||| ||||| ||| || ||| | | |||| || |||||| ||||| ||||||| || | |
|
|
| T |
1843006 |
gacaaagtttcagctacctctgcggctatcttaagacgagttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgc |
1842907 |
T |
 |
| Q |
198 |
cattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatc |
297 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||||| |||||||||||||||| || | |
|
|
| T |
1842906 |
cattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgagagagaataat |
1842807 |
T |
 |
| Q |
298 |
cacctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgta |
397 |
Q |
| |
|
||||||||||||||||| | ||||||||| | |||||| |||| || |||||||||||||| ||||| |||||||| || ||||||||||| ||| |
|
|
| T |
1842806 |
tacctcattaatgaattgattgatttggcttctatctattatttttgattttttgatagcaacgattcttttatcatctagaaatcctttgtaaacagta |
1842707 |
T |
 |
| Q |
398 |
ccaaaacctccttt |
411 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
1842706 |
ccaaaaccaccttt |
1842693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 30 - 324
Target Start/End: Original strand, 9170604 - 9170901
Alignment:
| Q |
30 |
catctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatatgacagagcctcagctacctctgcggctat |
129 |
Q |
| |
|
|||| ||||||||||| |||||| |||||||||||||| || || |||| ||| ||||||||||||| || | ||| ||||| |||||| ||||| |
|
|
| T |
9170604 |
catccaagagaatgttggtactcttaacatctctatggataattggaattgatgcagatgaatgtagatacgataaagctccagctgtctctgctgctat |
9170703 |
T |
 |
| Q |
130 |
c-ttaagacgagtcttccaagttggatcattcgtcttaccttttgtg---tgaataaattcagaaagagtaccattgctaacaaactcataaaccaacaa |
225 |
Q |
| |
|
| ||||| || || ||||| ||||||| ||| || ||| |||| ||| || || || || |||| ||||| ||||||||||| || || ||||| | |
|
|
| T |
9170704 |
ccttaag-cgggttttccatgttggattatttgttttatctttagtgctttgtatgaaatcgaaaagtgtaccgttgctaacaaattcgtacaccaatga |
9170802 |
T |
 |
| Q |
226 |
aggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttg |
324 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| | | |||| | ||||||||||||||||| |||||||| |
|
|
| T |
9170803 |
aggaacttctgtctctagacaacaccctaggagtttgacaacattcctatgatttatttgggtcagaacaactacctcattaatgaattgctcaatttg |
9170901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 414
Target Start/End: Original strand, 9200333 - 9200558
Alignment:
| Q |
189 |
aaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgaga |
288 |
Q |
| |
|
|||| ||||| ||||||||||| || || || || ||||||||||||| ||||||||||| |||| ||||||||| |||||||| ||||||||||| | |
|
|
| T |
9200333 |
aaagtgtaccgttgctaacaaattcgtacactaatgaaggaacttctgtctctagacaacagcctaggagtttgacaacattcctatgatttatttgggt |
9200432 |
T |
 |
| Q |
289 |
gacaacatccacctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttg |
388 |
Q |
| |
|
| |||| | ||||||||||||||||| |||||||| || ||| ||| |||| || ||||| | ||| |||||| | |||||| | | |||||| |
|
|
| T |
9200433 |
cagaacaactacctcattaatgaattgctcaatttgatttgcgtcaattattttggatttttttacagcgacaattttgttatcaggtaaaactcctttg |
9200532 |
T |
 |
| Q |
389 |
taaactgtaccaaaacctcctttacc |
414 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
9200533 |
taaactgtaccaaaacctcctctacc |
9200558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 309
Target Start/End: Original strand, 9155866 - 9156148
Alignment:
| Q |
30 |
catctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatatgacagagcctcagctacctctgcggctat |
129 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||||||| || ||| |||| ||| ||||||||||||| || | ||| | ||| |||||| ||||| |
|
|
| T |
9155866 |
catccaagagaatgttggtacttttgacatctctatggataatcggtattgatgcagatgaatgtagatacgataaagctccggctgtctctgctgctat |
9155965 |
T |
 |
| Q |
130 |
cttaagacgagtcttccaagttggatcattcgtcttaccttttgtg---tgaataaattcagaaagagtaccattgctaacaaactcataaaccaacaaa |
226 |
Q |
| |
|
||| | ||| || ||||| ||||||| || || ||| |||| || || || || ||| |||| |||||||||||||| || ||||||||||| || |
|
|
| T |
9155966 |
ctttaaacgggttttccatgttggattgtttgttttatctttagtactatgtatgaaatcaaaaagtgtaccattgctaacgaattcataaaccaaggaa |
9156065 |
T |
 |
| Q |
227 |
ggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatccacctcattaat |
309 |
Q |
| |
|
||||||||||| |||| |||||| || ||||||||||| ||||| |||||||||||||| || | ||| | ||||||||||| |
|
|
| T |
9156066 |
ggaacttctgtctctaaacaacatcccaagagtttgacaacatttctgtgatttatttgggataggacaactacctcattaat |
9156148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 364
Target Start/End: Original strand, 9218860 - 9219024
Alignment:
| Q |
200 |
ttgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgagagacaacatcca |
299 |
Q |
| |
|
||||||||||| ||||| |||||| ||||||||||||| || | |||||||||||| |||||||| || ||||| ||||||||||| || | |||| | | |
|
|
| T |
9218860 |
ttgctaacaaattcatacaccaacgaaggaacttctgtctccaaacaacaccctaaaagtttgacaacgttcctatgatttatttgggacagaacaacta |
9218959 |
T |
 |
| Q |
300 |
cctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaatt |
364 |
Q |
| |
|
|||||||||||||||| || || || || ||||||| |||| |||||||||| ||| |||||| |
|
|
| T |
9218960 |
cctcattaatgaattgctcgatctgatttgcgtctattattttggactttttgacagcgacaatt |
9219024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 372
Target Start/End: Complemental strand, 9118512 - 9118329
Alignment:
| Q |
189 |
aaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgaga |
288 |
Q |
| |
|
|||| ||||| | |||||| || ||||| ||||| ||||||||||||| |||| |||||||||||| |||||||| |||||||| ||||||||||| || |
|
|
| T |
9118512 |
aaagtgtaccgtggctaacgaattcatagaccaaggaaggaacttctgtctctaaacaacaccctaaaagtttgacaacattcctatgatttatttggga |
9118413 |
T |
 |
| Q |
289 |
gacaacatccacctcattaatgaattgttcaatttggcttttgtctattgttttagactttttgatagcaacaattctattatc |
372 |
Q |
| |
|
| || | | ||||||||||||||||| || ||||| || ||||||| || | |||||||||| ||| || ||||| ||||| |
|
|
| T |
9118412 |
cagaataactacctcattaatgaattgctcgatttgatttgcgtctattattctggactttttgacagccacgattctgttatc |
9118329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 9161940 - 9162075
Alignment:
| Q |
189 |
aaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgaga |
288 |
Q |
| |
|
|||| |||||||||||||| || ||||| |||||| ||||||||||||| |||| |||||| || ||||||||||| ||||| || ||||||||||| || |
|
|
| T |
9161940 |
aaagtgtaccattgctaacgaattcatacaccaacgaaggaacttctgtctctaaacaacatcccaagagtttgacaacatttctatgatttatttggga |
9162039 |
T |
 |
| Q |
289 |
gacaacatccacctcattaatgaattgttcaatttg |
324 |
Q |
| |
|
| |||| | ||||| |||||||| || |||||||| |
|
|
| T |
9162040 |
cagaacaactacctcgttaatgaactgctcaatttg |
9162075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 315
Target Start/End: Original strand, 9229734 - 9229860
Alignment:
| Q |
189 |
aaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcctgtgatttatttgaga |
288 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||| | |||||||||| ||| || | |||||| || ||||||||||| ||||| || ||||||||||| || |
|
|
| T |
9229734 |
aaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttggga |
9229833 |
T |
 |
| Q |
289 |
gacaacatccacctcattaatgaattg |
315 |
Q |
| |
|
| |||| |||||||||| |||||||| |
|
|
| T |
9229834 |
caaaacaaccacctcatttatgaattg |
9229860 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 9161778 - 9161843
Alignment:
| Q |
30 |
catctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgta |
95 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||| || ||| |||| ||| ||||||||| |
|
|
| T |
9161778 |
catctaagagaatgttggtactcttaacatctctatggataataggtattgatgcagatgaatgta |
9161843 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 9229572 - 9229644
Alignment:
| Q |
30 |
catctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatatga |
102 |
Q |
| |
|
|||| ||||||||||| |||| ||||||||||||||||| || ||| || ||| |||||||||||||||| |
|
|
| T |
9229572 |
catccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcagatgaatgtagatatga |
9229644 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 116; Significance: 7e-59; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 251 - 418
Target Start/End: Complemental strand, 37567809 - 37567642
Alignment:
| Q |
251 |
cctaagagtttgaccacattcctgtgatttatttgagagacaacatccacctcattaatgaattgttcaatttggcttttgtctattgttttagactttt |
350 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| || |||| |
|
|
| T |
37567809 |
cctaagagtttgaccacattcctatgatttatttgagagacaatgtccacctcattaatgaattgttcattttggctttcatctattgttttggattttt |
37567710 |
T |
 |
| Q |
351 |
tgatagcaacaattctattatcatcaagttcccctttgtaaactgtaccaaaacctcctttacctatg |
418 |
Q |
| |
|
||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
37567709 |
tgatagcaacagttctattatcatctagtttccctttgaaaactgtaccaaaacctcctctacctatg |
37567642 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 37572246 - 37572119
Alignment:
| Q |
129 |
tcttaagacgagtcttccaagttggatcattcgtcttaccttttgtgtgaataaattcagaaagagtaccattgctaacaaactcataaaccaacaaagg |
228 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37572246 |
tcttaagacgagttttctaagttggatcattcatcttaccttgtgtgtgtataaattcagaaagagtaccattgctaacaaactcataaaccaaccgagg |
37572147 |
T |
 |
| Q |
229 |
aacttctgtttctagacaacaccctaag |
256 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
37572146 |
aacttctgtttctagacaacaccctaag |
37572119 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 30105936 - 30105892
Alignment:
| Q |
232 |
ttctgtttctagacaacaccctaagagtttgaccacattcctgtg |
276 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| | ||||||||| |
|
|
| T |
30105936 |
ttctgtttcaagacaacagcctaagagtttgacaatattcctgtg |
30105892 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 40597866 - 40597787
Alignment:
| Q |
194 |
gtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccctaagagtttgaccacattcct |
273 |
Q |
| |
|
||||||||| || ||| |||||||| | ||| |||||||||||||||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
40597866 |
gtaccattgggaataaattcataaacaagcaatggaacttctgtttctaaacaacaacctacaagttttaccacattcct |
40597787 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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