View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5270-Insertion-11 (Length: 332)
Name: NF5270-Insertion-11
Description: NF5270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5270-Insertion-11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 332
Target Start/End: Complemental strand, 39670271 - 39669961
Alignment:
| Q |
8 |
taaagtagtaaaagcatagaaatagaatagaagagaagagaggtgggtaagtgagtgtatataatatgtgtcttgactgagtctgtatttttctgtttca |
107 |
Q |
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| T |
39670271 |
taaagtagtaaaagcatagaaatagaatagaagagaagagaggtgggtaagtgagtgtatataatatgtgtcttgactgagtctgtatttttctgtttca |
39670172 |
T |
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| Q |
108 |
tttgttcgagtggtccacgtcaactcaaataagagtagtaaatgccgctgcatgctgtgtcttttgtacagttgttggtgttgttgtaaatacttatgaa |
207 |
Q |
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| T |
39670171 |
tttgttcgagtggtccacgtcaactcaaataagagtagtaaatgccgctgcatgctgtgtcttttgtacagtt------gttgttgtaaatacttatgaa |
39670078 |
T |
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| Q |
208 |
tgaatgatagtgttatgatgaataataatactcctactaggctaccactacttggttttggtctttgttgtgttcctcgttactcgggctgttcctcatc |
307 |
Q |
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| T |
39670077 |
tgaatgatagtgttatgatgaataataatactcctact--------actacttggttttggtctttgttgtgttcctcgttactcgggctgttcctcatc |
39669986 |
T |
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| Q |
308 |
ctacgctcccgctgactccgacatg |
332 |
Q |
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| T |
39669985 |
ctacgctcccgctgactccgacatg |
39669961 |
T |
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