View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5270_low_32 (Length: 266)
Name: NF5270_low_32
Description: NF5270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5270_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 29332197 - 29332390
Alignment:
| Q |
36 |
tttggttcagatttagattaaattcaattgattattcaaatcaatttgaactatttttt-ggtatnnnnnnntcgattcaaactaatttaattagtttgt |
134 |
Q |
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| T |
29332197 |
tttggttcagatttagagtaaattcaattgattattcaaatcaatttgaactatttttttggtataaaaaaatcaattcaaactaatttaattagtttgt |
29332296 |
T |
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| Q |
135 |
tttgaattaccataactttatcatgttagtttgcatatcggctatccgtcctttaatgcgaaaacaaaccattacaggccccttcaatggatat |
228 |
Q |
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| T |
29332297 |
tttgaattactataactttatcatgttagtttgcatatctgctatcgatccattaatgcgaaaacaaactattataggccccttcaatgaatat |
29332390 |
T |
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