View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5272_low_2 (Length: 595)

Name: NF5272_low_2
Description: NF5272
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5272_low_2
NF5272_low_2
[»] chr7 (21 HSPs)
chr7 (17-584)||(511524-512083)
chr7 (156-231)||(6667790-6667865)
chr7 (156-231)||(17508855-17508930)
chr7 (156-231)||(17544284-17544359)
chr7 (156-231)||(21991057-21991132)
chr7 (156-231)||(36253325-36253400)
chr7 (156-231)||(43847368-43847443)
chr7 (156-231)||(46025706-46025781)
chr7 (156-230)||(37593478-37593552)
chr7 (156-230)||(39707663-39707737)
chr7 (154-227)||(10574758-10574831)
chr7 (156-228)||(24319877-24319949)
chr7 (156-228)||(31254785-31254857)
chr7 (167-230)||(21603864-21603927)
chr7 (156-231)||(41288351-41288426)
chr7 (156-218)||(36719224-36719286)
chr7 (156-230)||(39532627-39532701)
chr7 (156-230)||(39989841-39989915)
chr7 (156-229)||(25112882-25112955)
chr7 (156-228)||(11833413-11833485)
chr7 (156-184)||(43398742-43398770)
[»] chr5 (18 HSPs)
chr5 (156-227)||(6012716-6012787)
chr5 (170-231)||(34866820-34866881)
chr5 (156-231)||(11734496-11734571)
chr5 (156-231)||(42781396-42781471)
chr5 (156-228)||(177758-177830)
chr5 (156-231)||(17095892-17095967)
chr5 (156-231)||(17331723-17331798)
chr5 (156-231)||(39179496-39179571)
chr5 (164-230)||(13161748-13161814)
chr5 (156-230)||(34431459-34431533)
chr5 (156-189)||(11647579-11647612)
chr5 (169-230)||(42505065-42505126)
chr5 (156-231)||(17732038-17732113)
chr5 (156-231)||(23881767-23881842)
chr5 (156-231)||(26294005-26294080)
chr5 (156-230)||(7771473-7771547)
chr5 (156-228)||(6281439-6281511)
chr5 (169-229)||(15710931-15710991)
[»] chr3 (26 HSPs)
chr3 (156-231)||(14585857-14585932)
chr3 (156-230)||(53155090-53155164)
chr3 (156-231)||(13701661-13701736)
chr3 (156-231)||(19645585-19645660)
chr3 (156-231)||(30155949-30156024)
chr3 (156-228)||(2192473-2192545)
chr3 (156-231)||(33637789-33637864)
chr3 (156-231)||(45047892-45047967)
chr3 (156-231)||(48652108-48652183)
chr3 (156-231)||(55455257-55455332)
chr3 (165-227)||(41598139-41598201)
chr3 (156-230)||(41867993-41868067)
chr3 (156-230)||(55090359-55090433)
chr3 (170-231)||(4019986-4020047)
chr3 (156-228)||(3457317-3457389)
chr3 (155-231)||(11819478-11819554)
chr3 (156-228)||(50981128-50981200)
chr3 (156-228)||(51084262-51084334)
chr3 (156-231)||(24483355-24483430)
chr3 (156-231)||(31270704-31270779)
chr3 (156-227)||(32080426-32080497)
chr3 (156-230)||(49627764-49627838)
chr3 (156-184)||(550575-550603)
chr3 (156-184)||(2522785-2522813)
chr3 (156-231)||(19148370-19148446)
chr3 (156-228)||(31462417-31462489)
[»] chr1 (20 HSPs)
chr1 (156-230)||(32879088-32879162)
chr1 (156-228)||(25032757-25032829)
chr1 (155-231)||(4882028-4882104)
chr1 (156-231)||(15790927-15791002)
chr1 (169-230)||(22031768-22031829)
chr1 (156-228)||(13488190-13488262)
chr1 (169-228)||(26771493-26771552)
chr1 (156-231)||(28677790-28677865)
chr1 (156-231)||(29205663-29205738)
chr1 (156-231)||(32784474-32784549)
chr1 (156-231)||(44517543-44517618)
chr1 (157-231)||(1141074-1141148)
chr1 (155-185)||(8737911-8737941)
chr1 (156-230)||(10188542-10188616)
chr1 (156-230)||(37822015-37822089)
chr1 (156-230)||(27535092-27535162)
chr1 (156-189)||(29938595-29938628)
chr1 (156-231)||(7995230-7995303)
chr1 (156-228)||(12537914-12537986)
chr1 (156-184)||(25689551-25689579)
[»] chr6 (16 HSPs)
chr6 (156-231)||(30813452-30813527)
chr6 (156-231)||(31705560-31705635)
chr6 (155-229)||(5527301-5527375)
chr6 (156-231)||(6295900-6295975)
chr6 (156-231)||(6302710-6302785)
chr6 (156-231)||(21507505-21507580)
chr6 (156-231)||(23654644-23654719)
chr6 (156-230)||(12653970-12654044)
chr6 (156-231)||(2304489-2304564)
chr6 (156-231)||(5146321-5146396)
chr6 (156-231)||(12481030-12481105)
chr6 (156-231)||(35219564-35219639)
chr6 (160-206)||(16328766-16328812)
chr6 (156-230)||(19402504-19402578)
chr6 (157-226)||(14731001-14731070)
chr6 (167-231)||(21942092-21942156)
[»] chr4 (31 HSPs)
chr4 (156-231)||(6912075-6912150)
chr4 (156-231)||(18502493-18502568)
chr4 (157-203)||(31444766-31444812)
chr4 (156-230)||(56062369-56062443)
chr4 (156-231)||(20887408-20887483)
chr4 (156-231)||(24100528-24100603)
chr4 (156-231)||(27395211-27395286)
chr4 (156-231)||(42197948-42198023)
chr4 (156-231)||(56236482-56236557)
chr4 (156-230)||(36124009-36124083)
chr4 (156-230)||(41837709-41837783)
chr4 (156-230)||(45350722-45350796)
chr4 (156-230)||(45360201-45360275)
chr4 (156-228)||(626213-626285)
chr4 (156-228)||(28837450-28837522)
chr4 (156-231)||(3159357-3159432)
chr4 (156-231)||(6882339-6882414)
chr4 (156-231)||(13965938-13966013)
chr4 (156-231)||(38943808-38943883)
chr4 (156-231)||(43244032-43244107)
chr4 (156-230)||(393926-394000)
chr4 (156-230)||(8517111-8517185)
chr4 (156-230)||(11209965-11210039)
chr4 (156-230)||(37431551-37431625)
chr4 (172-230)||(55600198-55600256)
chr4 (266-304)||(56062405-56062443)
chr4 (170-231)||(7242451-7242512)
chr4 (166-227)||(22121837-22121898)
chr4 (178-231)||(30416292-30416345)
chr4 (156-228)||(7060709-7060781)
chr4 (156-228)||(50801597-50801669)
[»] chr2 (27 HSPs)
chr2 (156-231)||(11798189-11798264)
chr2 (156-230)||(18089064-18089138)
chr2 (155-231)||(19904883-19904959)
chr2 (156-228)||(34962649-34962721)
chr2 (156-231)||(9689636-9689711)
chr2 (156-231)||(25068236-25068311)
chr2 (156-231)||(27096084-27096159)
chr2 (156-231)||(38384117-38384192)
chr2 (156-231)||(43696263-43696338)
chr2 (156-230)||(13548571-13548645)
chr2 (169-231)||(15920261-15920323)
chr2 (156-230)||(20560785-20560859)
chr2 (156-230)||(29543188-29543262)
chr2 (156-230)||(33012443-33012517)
chr2 (170-231)||(11550331-11550392)
chr2 (151-231)||(7581758-7581838)
chr2 (156-228)||(12705081-12705153)
chr2 (156-231)||(4703526-4703601)
chr2 (156-231)||(4739724-4739799)
chr2 (156-231)||(11937517-11937592)
chr2 (156-231)||(12890768-12890843)
chr2 (156-231)||(13878660-13878735)
chr2 (156-231)||(14018785-14018860)
chr2 (156-230)||(13740306-13740380)
chr2 (156-230)||(28230749-28230823)
chr2 (156-230)||(35333900-35333974)
chr2 (156-189)||(20607147-20607180)
[»] scaffold0007 (1 HSPs)
scaffold0007 (163-228)||(201731-201796)
[»] chr8 (21 HSPs)
chr8 (155-231)||(24790829-24790905)
chr8 (156-231)||(2234129-2234204)
chr8 (156-227)||(28296778-28296849)
chr8 (156-228)||(2968910-2968982)
chr8 (156-228)||(13575871-13575943)
chr8 (156-231)||(9501963-9502038)
chr8 (156-231)||(11162281-11162356)
chr8 (169-228)||(13977797-13977856)
chr8 (156-230)||(15286692-15286767)
chr8 (156-230)||(15467061-15467136)
chr8 (156-231)||(31202843-31202918)
chr8 (156-231)||(39067349-39067424)
chr8 (169-228)||(41362141-41362200)
chr8 (156-230)||(37613031-37613105)
chr8 (269-298)||(14918354-14918383)
chr8 (170-231)||(41996931-41996992)
chr8 (170-230)||(5990001-5990061)
chr8 (172-228)||(9799679-9799735)
chr8 (156-228)||(9802051-9802123)
chr8 (171-231)||(13570426-13570486)
chr8 (156-212)||(31407429-31407485)
[»] scaffold0056 (1 HSPs)
scaffold0056 (156-231)||(74559-74634)
[»] scaffold0321 (1 HSPs)
scaffold0321 (156-231)||(6780-6856)
[»] scaffold0536 (1 HSPs)
scaffold0536 (156-231)||(3290-3365)
[»] scaffold0155 (1 HSPs)
scaffold0155 (156-231)||(35470-35545)
[»] scaffold0090 (1 HSPs)
scaffold0090 (156-230)||(11220-11294)
[»] scaffold0001 (1 HSPs)
scaffold0001 (156-230)||(403900-403974)


Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 17 - 584
Target Start/End: Original strand, 511524 - 512083
Alignment:
Q  17 acatgttttgtcatgtctacatgtttcatgtgttaacatgtctttagatattctcaatagtcatatttgtaannnnnnnnnnnntttctgttttacgcag 116  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||             |||||||||||||||    
T  511524 acatgctttgtcatgtctacatgtttcatgtgttaacctgtctttagatattctcaatagtcatatttgtaaatatatatata--ttctgttttacgcag 511621  T
Q  117 ttaaaaagaatgttgtgagtttgtttctaagctaatcattttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagta 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  511622 ttaaaaagaatgttgtgagtttgtttctaagctaatcattttttagcgactttgaatttgtattgtattgatgaactatatcaatttaaacgaatgagta 511721  T
Q  217 tcatttatttttgtcnnnnnnnntgtctttaaatattctcatgtgcttcctatatcaatttaaacgaatgaatattatttatctttgtnnnnnnnnnn-- 314  Q
    |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||                
T  511722 tcatttatttttgtcaaaaaaaatgtctttaaatattctcatgtgcttcctatatcaatttaaaggaatgaatatcatttatctttgttaaaaagaaaat 511821  T
Q  315 gtctttgaatactctatcatgtgcttcctacttgcctcacatgttaatttcctaagatccaagtgccaacgcgtgttctaagatgcttctaaaatctgat 414  Q
    ||||||||||||||| |||||||||||||||||||||      ||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||||    
T  511822 gtctttgaatactctctcatgtgcttcctacttgcct------ttaatttcctacgatccaagtgccaacg--tgtactaagatgcttctaaaatctgat 511913  T
Q  415 attaggattagtcgatagtatgtaattatgcatcaacatgtctgtaacggttcatgtcatcaatgtttcacatgtatatcacgataaacatgtttatcca 514  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  511914 attagcattagtcgatagtatgtaattatgcatcaacatgtctgtaacggttcatgtcatcaatgtttcacatgtatatcacgataaacatgtttatcca 512013  T
Q  515 ttactattgatctatgaacatgtttatctaatttggcagggatttctaaattatctcacacaatattcat 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  512014 ttactattgatctatgaacatgtttatctaatttggcagggatttctaaattatctcacacaatattcat 512083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 6667790 - 6667865
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| ||||  ||  |||||||| || |||||| |||| ||||||||||||    
T  6667790 tttttagcgaatttgaatttgtattgtatcgatgtgctctatcaatttgaatgaatgaatatcgtttatttttgtc 6667865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 17508930 - 17508855
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||  ||||||||||||| |||| |||  ||||||||||| |||||| ||||||||| |||||||    
T  17508930 tttttagcgaatttagatttgtattgtatcgatgtactctatcaatttaaaagaatgaatatcatttacttttgtc 17508855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 17544284 - 17544359
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||  ||||||||||||| |||| |||  ||||||||||| |||||| ||||||||| |||||||    
T  17544284 tttttagcgaatttagatttgtattgtatcgatgtactctatcaatttaaaagaatgaatatcatttacttttgtc 17544359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 21991057 - 21991132
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  21991057 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 21991132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 36253325 - 36253400
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||| ||||||||||||| |||| |||  |||||||| || ||||||||||| ||||||||||||    
T  36253325 tttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgtc 36253400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 43847368 - 43847443
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||  |||  |||||||| || |||||| |||||||||||||||||    
T  43847368 tttttagcgaatttggatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcatttatttttgtc 43847443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 46025781 - 46025706
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  46025781 tttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtc 46025706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 37593478 - 37593552
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||  ||||||||||||| |||| ||| ||||||||| || |||||| |||| |||||||||||    
T  37593478 tttttagcgaatttagatttgtattgtatcgatgtactccatcaatttgaatgaatgaatatcgtttatttttgt 37593552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 39707663 - 39707737
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||  || |||||||||||||| ||||  |||||||| || |||||| |||| |||||||||||    
T  39707663 tttttagcgactttcgatatgtattgtattgatccactctatcaatttgaatgaatgaatatcgtttatttttgt 39707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 10574758 - 10574831
Alignment:
Q  154 attttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    |||||||||||| |||  |||| ||||||||||||| |||  |||||||| || |||||| |||||||||||||    
T  10574758 attttttagcgaatttagatttatattgtattgatgtactctatcaatttgaatgaatgaatatcatttatttt 10574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 24319949 - 24319877
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||  ||||||||||||| |||| |||  ||||||||||| |||||| |||| |||||||||    
T  24319949 tttttagcgaatttagatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttattttt 24319877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 31254857 - 31254785
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||| |||||||||||||||||||| |||| | |  |||||||| || |||||| |||| |||||||||    
T  31254857 tttttagcaactttgaatttgtattgtatcgatgtaatctatcaatttgaatgaatgaatatcctttattttt 31254785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 21603864 - 21603927
Alignment:
Q  167 tttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||||||||||| |||  |||||||| || |||||| |||| || ||||||||    
T  21603864 tttgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgttaatttttgt 21603927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 41288351 - 41288426
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| || |||||||||||||||||| |||| |||  |||||||| || ||| || |||| ||||||||||||    
T  41288351 tttttagtgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatcgtttatttttgtc 41288426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 36719286 - 36719224
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatc 218  Q
    |||||||||| |||| ||||||||||||| ||||||||  |||||||| || |||||| ||||    
T  36719286 tttttagcgaatttggatttgtattgtatcgatgcactctatcaatttgaatgaatgaatatc 36719224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 39532701 - 39532627
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||||||||||||||||| | || |||  |||||||| || |||| | |||| |||||||||||    
T  39532701 tttttagcgaatttgaatttgtattgtatcggtgtactctatcaatttgaatgaattaatatcgtttatttttgt 39532627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 39989915 - 39989841
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||| ||||| ||||| ||||||||||| | |||  |||||||| || | |||| ||||||||||||||||    
T  39989915 tttttagcaactttaaatttatattgtattgacgtactctatcaatttgaatgcatgaatatcatttatttttgt 39989841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 25112882 - 25112955
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttg 229  Q
    |||||||||||||||| ||| |||||||| |||| |||  |||| ||| || |||||| |||| ||||||||||    
T  25112882 tttttagcgactttgattttatattgtatcgatgtactctatcattttgaatgaatgactatcgtttatttttg 25112955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 11833413 - 11833485
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |  ||||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||    
T  11833413 tttttagcgaatgcgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 11833485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 43398742 - 43398770
Alignment:
Q  156 tttttagcgactttgaatttgtattgtat 184  Q
    |||||||||||||||||||||||||||||    
T  43398742 tttttagcgactttgaatttgtattgtat 43398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 6012787 - 6012716
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    |||||||||||||||||||||||||||||| ||| |||  |||||||||||  ||||| |||||||||||||    
T  6012787 tttttagcgactttgaatttgtattgtattaatgtactctatcaatttaaattaatgattatcatttatttt 6012716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 34866820 - 34866881
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  34866820 gaatttgcattgtattgatgcactatatcaatttgaatgaatgaatatcatttatttttgtc 34866881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 11734571 - 11734496
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  11734571 tttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtc 11734496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 42781396 - 42781471
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||| ||  ||| | |||| ||||||||||||    
T  42781396 tttttagcgactttgaatttgtattgtatcgatgcactctatcaatttgaataaataaatatcgtttatttttgtc 42781471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 177830 - 177758
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| ||||||||||||| |||| ||| ||||||||| || |||||| |||||||| |||||    
T  177830 tttttagcgaatttggatttgtattgtatcgatgtactccatcaatttgaatgaatgaatatcattttttttt 177758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 17095967 - 17095892
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||| | || ||||||||||||    
T  17095967 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatgtcgtttatttttgtc 17095892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 17331723 - 17331798
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  17331723 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 17331798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 39179571 - 39179496
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  39179571 tttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtc 39179496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 13161748 - 13161814
Alignment:
Q  164 gactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||||||||||||||||||| |||  |||||||| |  ||||||  |||||||||||||||    
T  13161748 gactttgaatttgtattgtattgatgtactctatcaattttagtgaatgaaaatcatttatttttgt 13161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 34431459 - 34431533
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  34431459 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 34431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 11647579 - 11647612
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatg 189  Q
    ||||||||||||||||||||||||||||||||||    
T  11647579 tttttagcgactttgaatttgtattgtattgatg 11647612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 42505126 - 42505065
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||||||||| |||  |||||||| || |||||| |||| |||||||||||    
T  42505126 tgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 42505065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 17732113 - 17732038
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| || |||| ||||||||||||| |||| |||  |||||||| || || ||| |||||||||||||||||    
T  17732113 tttttagtgaatttggatttgtattgtatcgatgtactctatcaatttgaatgagtgaatatcatttatttttgtc 17732038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 23881842 - 23881767
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||| |||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  23881842 ttttttgcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 23881767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 26294005 - 26294080
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| || | |||  ||| |||| || |||||| |||| ||||||||||||    
T  26294005 tttttagcgaatttgaatttgtattgtatcgacgtactctatctatttgaatgaatgaatatcgtttatttttgtc 26294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 7771547 - 7771473
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||  ||||||||||||| |||| |||| |||||||| || |||| | |||| |||||||||||    
T  7771547 tttttagcgaatttagatttgtattgtatcgatgtactatatcaatttgaatgaataaatatcgtttatttttgt 7771473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 6281439 - 6281511
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||||||||||||||||| |||  |||  |||||||| || |||||| |||| |||| ||||    
T  6281439 tttttagcgaatttgaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttactttt 6281511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 15710931 - 15710991
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttg 229  Q
    |||||||| |||||||||||| | |  |||||||| || |||||| |||||||||||||||    
T  15710931 tgaatttgcattgtattgatgtattctatcaatttgaatgaatgaatatcatttatttttg 15710991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 9e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 14585857 - 14585932
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||||||||||||||||||||||| |||  |||||||| || |||||| |||| ||||||||||||    
T  14585857 tttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 14585932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 53155164 - 53155090
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||||||||||||||||| |||| |||  ||||||||||| |||||| |||| |||||||||||    
T  53155164 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 53155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 13701736 - 13701661
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  13701736 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 13701661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 19645585 - 19645660
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||| |||||||||||| |||  |||||||| || |||||| |||| ||||||||||||    
T  19645585 tttttagcgaatttgaatttgaattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 19645660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 30156024 - 30155949
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || ||||||||||| ||||||||||||    
T  30156024 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgtc 30155949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 2192473 - 2192545
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||    
T  2192473 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 33637789 - 33637864
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  33637789 tttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtc 33637864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 45047892 - 45047967
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||  |||  |||||||| || |||||| |||||||||||||||||    
T  45047892 tttttagcgaatttggatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcatttatttttgtc 45047967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 48652183 - 48652108
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| | ||||||||||| |||| |||  |||||||| || |||||| |||||||||||||||||    
T  48652183 tttttagcgaatttggagttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcatttatttttgtc 48652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 55455257 - 55455332
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||||||||||||||||||  ||| |||  |||||||| || |||||| |||| ||||||||||||    
T  55455257 tttttagcgaatttgaatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 55455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 41598201 - 41598139
Alignment:
Q  165 actttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    ||||||||||||||| ||||||||| |||| |||||||||||  ||||| |||| ||||||||    
T  41598201 actttgaatttgtatcgtattgatgtactatatcaatttaaataaatgaatatcgtttatttt 41598139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 41868067 - 41867993
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||  |||| |||||||||||    
T  41868067 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgcatatcgtttatttttgt 41867993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 55090433 - 55090359
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  55090433 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 55090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 4019986 - 4020047
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||||||| ||||||||  |||||||| || |||||| |||||||||||||||||    
T  4019986 gaatttgcattgtatcgatgcactctatcaatttgaatgaatgaatatcatttatttttgtc 4020047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 3457317 - 3457389
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| |||||||||||||  ||| |||  ||||||||||| |||||| |||| |||||||||    
T  3457317 tttttagcgaatttggatttgtattgtatcaatgtactctatcaatttaaatgaatgaatatcgtttattttt 3457389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 11819478 - 11819554
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||| |||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  11819478 ttttatagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 11819554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 50981200 - 50981128
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||||||| |||||||| | |||||||| |||  |||||||| || |||||| |||| |||||||||    
T  50981200 tttttagcgactttaaatttgtactatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 51084334 - 51084262
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||||||| |||||||| | |||||||| |||  |||||||| || |||||| |||| |||||||||    
T  51084334 tttttagcgactttaaatttgtactatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 24483430 - 24483355
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||| ||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  24483430 tttttagcgaatttggatttgtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 24483355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 31270704 - 31270779
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||||||||||||||||||||||| |||  ||| |||| || |||| | |||| | ||||||||||    
T  31270704 tttttagcgaatttgaatttgtattgtattgatgtactctatccatttgaatgaataaatatcgtatatttttgtc 31270779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 32080497 - 32080426
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || ||| || |||| ||||||||    
T  32080497 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaaagaatatcgtttatttt 32080426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 49627838 - 49627764
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| |||| |||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  49627838 tttttagcgaatttggatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 49627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 550575 - 550603
Alignment:
Q  156 tttttagcgactttgaatttgtattgtat 184  Q
    |||||||||||||||||||||||||||||    
T  550575 tttttagcgactttgaatttgtattgtat 550603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 2522813 - 2522785
Alignment:
Q  156 tttttagcgactttgaatttgtattgtat 184  Q
    |||||||||||||||||||||||||||||    
T  2522813 tttttagcgactttgaatttgtattgtat 2522785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 19148370 - 19148446
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatg-agtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| ||   |||||||| || ||||| | |||| ||||||||||||    
T  19148370 tttttagcgaatttgaatttgtattgtatcgatgtacactatcaatttgaatgaatgaaatatcgtttatttttgtc 19148446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 31462489 - 31462417
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| ||| |||||||||||||| |||| |||  |||||||| || |||||| |||| |||| ||||    
T  31462489 tttttagcgaatttaaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttactttt 31462417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 32879088 - 32879162
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||| ||||||||||||| |||| |||| |||||||| || |||||| |||| |||||||||||    
T  32879088 tttttagcgactttggatttgtattgtatcgatgtactaaatcaatttgaatgaatgattatcgtttatttttgt 32879162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 25032829 - 25032757
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||||||||||||||||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||    
T  25032829 tttttagcgactttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 25032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 4882104 - 4882028
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  4882104 ttttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 4882028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 15791002 - 15790927
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| ||  ||||| |||| ||||||||||||    
T  15791002 tttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaataaatgaatatcttttatttttgtc 15790927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 22031829 - 22031768
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||||||||| |||  |||||||| || |||||| ||||| ||||||||||    
T  22031829 tgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcaattatttttgt 22031768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 13488262 - 13488190
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| ||||| ||||||||    
T  13488262 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcaattattttt 13488190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 26771493 - 26771552
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||||||||| |||| |||  |||||||| || |||||| ||||||||||||||    
T  26771493 tgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttattttt 26771552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 28677865 - 28677790
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| ||  ||||| |||| ||||||||||||    
T  28677865 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaataaatgaatatcgtttatttttgtc 28677790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 29205663 - 29205738
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| |||| |||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  29205663 tttttagcgaatttggatttttattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 29205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 32784474 - 32784549
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| ||  ||||| |||  ||||||||||||    
T  32784474 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaattaatgaatatagtttatttttgtc 32784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 44517543 - 44517618
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| || |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  44517543 tttttagtgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 44517618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 1141074 - 1141148
Alignment:
Q  157 ttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||||||||||| |||| |||||||| | |  ||| ||||||| |||||| |||| ||||||||||||    
T  1141074 ttttagcaactttgaatttatattatattgatgtattctatcgatttaaaagaatgaatatcgtttatttttgtc 1141148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 8737911 - 8737941
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtatt 185  Q
    |||||||||||||||||||||||||||||||    
T  8737911 ttttttagcgactttgaatttgtattgtatt 8737941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 10188616 - 10188542
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||||||||||||||||   ||| |||  || ||||| || |||||| ||| ||||||||||||    
T  10188616 tttttagcgactttgaatttgtattgtaccaatgtactctattaatttgaatgaatgaatattatttatttttgt 10188542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 37822089 - 37822015
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| |  |||||| |||| |||||||||||    
T  37822089 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgagtgaatgaatatcgtttatttttgt 37822015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 27535092 - 27535162
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||||||||||||||||| |||| |||  ||||||||    |||||| |||| |||||||||||    
T  27535092 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaattt----gaatgaatatcgtttatttttgt 27535162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 29938595 - 29938628
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatg 189  Q
    ||||||||||||||||||||||||||||| ||||    
T  29938595 tttttagcgactttgaatttgtattgtatcgatg 29938628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 7995303 - 7995230
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||  |||| ||||  |||||||||| |||||| ||  |||||||||||||    
T  7995303 tttttagcgaatttggatttgtattgtaccgatgtacta--tcaatttaaatgaatgaatacaatttatttttgtc 7995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 12537914 - 12537986
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||| |||||| |||| ||||||||||||| |||  |||||||| ||  ||| | ||||||||||||||    
T  12537914 tttttagcaactttgcatttatattgtattgatgtactctatcaatttgaataaattaatatcatttattttt 12537986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 25689579 - 25689551
Alignment:
Q  156 tttttagcgactttgaatttgtattgtat 184  Q
    |||||||||||||||||||||||||||||    
T  25689579 tttttagcgactttgaatttgtattgtat 25689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 30813452 - 30813527
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  30813452 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 30813527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 31705560 - 31705635
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||||||||||||||||| |||| |||  ||||||||||| |||||| |||| ||||||||||||    
T  31705560 tttttagccaatttgaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtc 31705635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 5527375 - 5527301
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttg 229  Q
    ||||||| ||||||||||||| ||||||||||||| |||  |||||||  || |||||| |||||||||||||||    
T  5527375 ttttttaacgactttgaatttatattgtattgatgtactctatcaattcgaatgaatgaatatcatttatttttg 5527301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 6295975 - 6295900
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||||||||||||||||| |||| |||  |||||||| || |||||| ||| |||||||||||||    
T  6295975 tttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatttatttttgtc 6295900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 6302785 - 6302710
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||||||||||||||||| |||| |||  |||||||| || |||||| ||| |||||||||||||    
T  6302785 tttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatttatttttgtc 6302710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 21507580 - 21507505
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| |||||||||||||||||| |||  |||| ||| || |||||| |||| ||||||||||||    
T  21507580 tttttagcgaatttggatttgtattgtattgatgtactctatcagtttgaatgaatgaatatcgtttatttttgtc 21507505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 23654644 - 23654719
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  23654644 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 23654719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 12654044 - 12653970
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||||| | ||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  12654044 tttttagcgactttggaattgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 12653970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 2304564 - 2304489
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||| ||||||||||| || |||| |||  ||||||||||| |||||| |||| |||| |||||||    
T  2304564 tttttagcgaatttaaatttgtattgcatcgatgtactctatcaatttaaatgaatgaatatcgtttacttttgtc 2304489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 5146321 - 5146396
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||| ||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  5146321 tttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 5146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 12481105 - 12481030
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  12481105 tttttagcaaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtc 12481030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 35219639 - 35219564
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  | |||||| || |||||| |||| ||||||||||||    
T  35219639 tttttagcgaatttggatttgtattgtatcgatgtactctaccaatttgaatgaatgaatatcgtttatttttgtc 35219564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 16328812 - 16328766
Alignment:
Q  160 tagcgactttgaatttgtattgtattgatgcactacatcaatttaaa 206  Q
    ||||||||||||||||||||||||| |||| |||  |||||||||||    
T  16328812 tagcgactttgaatttgtattgtatggatgtactctatcaatttaaa 16328766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 19402578 - 19402504
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||| ||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  19402578 tttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 19402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 14731001 - 14731070
Alignment:
Q  157 ttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattt 226  Q
    ||||||||||||||||| |||||||||| |||| |    |||||||| || |||||| ||||||||||||    
T  14731001 ttttagcgactttgaatatgtattgtatcgatgtatgttatcaatttgaatgaatgaatatcatttattt 14731070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 21942156 - 21942092
Alignment:
Q  167 tttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||| |||| ||| ||||  |||||||||||| || |||| | |||||||||||||||||    
T  21942156 tttgaatttttattatatcgatgtgctacatcaatttgaatgaattaatatcatttatttttgtc 21942092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 6912075 - 6912150
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||||||||||||||||||||||| |||  |||||||| || |||||| || | ||||||||||||    
T  6912075 tttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaatgaatgaataacgtttatttttgtc 6912150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 18502568 - 18502493
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  ||||||||||| |||||| |||| ||||||||||||    
T  18502568 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtc 18502493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 31444812 - 31444766
Alignment:
Q  157 ttttagcgactttgaatttgtattgtattgatgcactacatcaattt 203  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  31444812 ttttagtgactttgaatttgtattgtattgatgcactatatcaattt 31444766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 56062369 - 56062443
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||| || |||||| ||| |||||| |||||    
T  56062369 tttttagcgactttgaatttgtattgtatgaatgtactatatcaattttaatgaatgaatattatttatctttgt 56062443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 20887483 - 20887408
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| |||| |||||||| |||| |||  ||||||||||| |||||| |||| ||||||||||||    
T  20887483 tttttagcgaatttggatttatattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtc 20887408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 24100528 - 24100603
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||  ||| ||||||||||||| |||| |||  |||||||| || |||||| |||||||||||||||||    
T  24100528 tttttagcgaaattggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgtc 24100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 27395211 - 27395286
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| || |||||| ||| |||||||||||||    
T  27395211 tttttagcgaatttgaatttgtattatatcgatgaactctatcaatttgaatgaatgaatattatttatttttgtc 27395286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 42197948 - 42198023
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||||||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  42197948 tttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 42198023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 56236557 - 56236482
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| || |||||||||| |||| |||  |||||||| || |||||| |||||||||||||||||    
T  56236557 tttttagcgattttggatatgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgtc 56236482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 36124083 - 36124009
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  36124083 tttttagcgaatttggatttgtattgtatcgatggactctatcaatttgaaagaatgaatatcgtttatttttgt 36124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 41837709 - 41837783
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||| |||||||||||||||| |||||||||| |||  |||||||| || |||| | |||| |||||||||||    
T  41837709 tttttaacgactttgaatttgtagtgtattgatgtactctatcaatttgaatgaataattatcgtttatttttgt 41837783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 45350796 - 45350722
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  45350796 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 45350722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 45360275 - 45360201
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  45360275 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 45360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 626285 - 626213
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||| | |||||||||||||||||| |||| |||  |||||||| || |||||| | ||||||||||||    
T  626285 tttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatttcatttattttt 626213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 28837450 - 28837522
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| ||||| ||||||||    
T  28837450 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcagttattttt 28837522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 3159357 - 3159432
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||||||||||||||||||||| |||| |||  |||||||| || |||||| |||  |||| |||||||    
T  3159357 tttttagtgactttgaatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatagtttaattttgtc 3159432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 6882339 - 6882414
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||| |||||||    
T  6882339 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgtc 6882414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 13965938 - 13966013
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| || |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  13965938 tttttagggaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 13966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 38943883 - 38943808
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||  |||| ||||||||||||| |||| |||  |||||||| || |||||| |||||||||||| ||||    
T  38943883 tttttagcggatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttgtgtc 38943808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 43244107 - 43244032
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| | || |||  |||||||| || |||||| |||| ||||||||||||    
T  43244107 tttttagcgaatttggatttgtattgtatcggtgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 43244032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 394000 - 393926
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||| ||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  394000 tttttaacgaatttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 393926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 8517185 - 8517111
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| |||||||||||||  ||| |||  |||||||| || |||||| |||| |||||||||||    
T  8517185 tttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 11210039 - 11209965
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||| || |||| ||||| |||||||||||| |||  |||||||| || |||||| |||| |||||||||||    
T  11210039 tttttagtgaatttggatttgcattgtattgatgtactctatcaatttgaatgaatgaatatcttttatttttgt 11209965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 37431551 - 37431625
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||| | |||||||||||||||||| |||  |||  ||||||||||| ||| || |||| |||||||||||    
T  37431551 tttttagcaattttgaatttgtattgtatcgatatactctatcaatttaaaagaaagaatatcgtttatttttgt 37431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 55600256 - 55600198
Alignment:
Q  172 atttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||||||||| ||||||||  |||||||| || |||||| |||| |||||||||||    
T  55600256 atttgtattgtatcgatgcactctatcaatttgaatgaatgaatatcgtttatttttgt 55600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 56062405 - 56062443
Alignment:
Q  266 ctatatcaatttaaacgaatgaatattatttatctttgt 304  Q
    |||||||||||| || |||||||||||||||||||||||    
T  56062405 ctatatcaattttaatgaatgaatattatttatctttgt 56062443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 7242512 - 7242451
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||||||| |||| |||  |||||||||||  ||||| |||||||||||||||||    
T  7242512 gaatttgcattgtatcgatgtactctatcaatttaaataaatgaatatcatttatttttgtc 7242451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 22121837 - 22121898
Alignment:
Q  166 ctttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    |||||||||||||||||||||||| |||  ||||| ||||| || ||| |||| ||||||||    
T  22121837 ctttgaatttgtattgtattgatgtactctatcaaattaaatgattgaatatcgtttatttt 22121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 30416345 - 30416292
Alignment:
Q  178 attgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| |||| |||  ||||||||||| |||||| |||||||||||||||||    
T  30416345 attgtatcgatgtactctatcaatttaaatgaatgaatatcatttatttttgtc 30416292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 7060709 - 7060781
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| |||||||||||||  ||| |||  |||||||| || |||||| |||| |||||||||    
T  7060709 tttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttattttt 7060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 50801597 - 50801669
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| ||||||||| ||||||||||||  |||||||| ||  ||||| |||| |||| ||||    
T  50801597 tttttagcgaatttggatttgtattttattgatgcactctatcaatttgaataaatgaatatcgtttactttt 50801669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 11798264 - 11798189
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||||||||||||| ||||||| |||| |||  ||||||||||| |||||| |||| |||||| |||||    
T  11798264 tttttagcgactttgaatttgaattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttattgttgtc 11798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 18089138 - 18089064
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||| |||||||| || |||||| |||| |||||||||||    
T  18089138 tttttagcgaatttggatttgtattgtatcgatgtactatatcaatttgaatgaatgaatatcgtttatttttgt 18089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 19904883 - 19904959
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||| | |||||||||||||| ||| |||| |||| ||||||||||| |||||| ||| | |||||||||||    
T  19904883 ttttttagcaattttgaatttgtattatatcgatgtactatatcaatttaaatgaatgaatattaattatttttgtc 19904959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 34962721 - 34962649
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| |||||||||||||| ||| |||  |||||||| || |||||| ||||||||||||||    
T  34962721 tttttagcgaatttggatttgtattgtatttatgtactctatcaatttgaatgaatgaatatcatttattttt 34962649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 9689711 - 9689636
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||| ||| |||| |||  ||||||||||| |||||  |||| ||||||||||||    
T  9689711 tttttagcgaatttgaatttgtattatatcgatgtactctatcaatttaaatgaatgtatatcgtttatttttgtc 9689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 25068236 - 25068311
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  25068236 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 25068311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 27096084 - 27096159
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| || ||||||||||||||||||  ||| ||| ||||||||| || |||||| |||| ||||||||||||    
T  27096084 tttttagtgaatttgaatttgtattgtatctatgtactccatcaatttgaatgaatgaatatcgtttatttttgtc 27096159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 38384192 - 38384117
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| ||||  ||  |||||||| || |||||| |||| ||||||||||||    
T  38384192 tttttagcgaatttgaatttgtattgtatcgatgtgctttatcaatttgaatgaatgaatatcgtttatttttgtc 38384117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 43696263 - 43696338
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||  |||||||||||||||||| |||  |||||||| || |||||| |||| ||||||||||||    
T  43696263 tttttagcgaatttagatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 43696338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 13548645 - 13548571
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||| | ||| |||| ||||||||| |||| |||| ||||||||||| |||||| |||| |||||||||||    
T  13548645 tttttagcaattttaaattcgtattgtatcgatgtactatatcaatttaaatgaatgaatatcgtttatttttgt 13548571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 15920261 - 15920323
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||||||||| |||| |||  |||||||| || |||||| |||||||||||||||||    
T  15920261 tgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgtc 15920323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 20560859 - 20560785
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  20560859 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 20560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 29543188 - 29543262
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||| | |||||||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  29543188 tttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 29543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 33012443 - 33012517
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| ||| |||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  33012443 tttttagcgaatttaaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 33012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 11550392 - 11550331
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| |||||||||||| |||  |||||||| || |||||| |||||||||||||||||    
T  11550392 gaatttgcattgtattgatgtactctatcaatttgaatgaatgaatatcatttatttttgtc 11550331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 7581838 - 7581758
Alignment:
Q  151 atcattttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||||| |||||| ||||||| |||||| |||  |||  |||||||| || |||| | |||||||||||||||||    
T  7581838 atcattttttagagacttttaatttgttttgtatcgatatactttatcaatttgaatgaataaatatcatttatttttgtc 7581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 12705081 - 12705153
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||    
T  12705081 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcctttattttt 12705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 4703526 - 4703601
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||| ||||||||||||||||||||||| |||| |||   |||||||  | |||||| |||| ||||||||||||    
T  4703526 tttttggcgactttgaatttgtattgtatcgatgtactctgtcaatttggatgaatgaatatcgtttatttttgtc 4703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 4739724 - 4739799
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||| |||||||    
T  4739724 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgtc 4739799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 11937592 - 11937517
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||  ||||||||||||||||| |||| |||  ||||||||  |  ||||| |||||||||||||||||    
T  11937592 tttttagcgaaattgaatttgtattgtatcgatgtactctatcaatttggataaatgaatatcatttatttttgtc 11937517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 12890843 - 12890768
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| ||  ||||| |||| ||||||||||||    
T  12890843 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaattaatgaatatcgtttatttttgtc 12890768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 13878735 - 13878660
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||  ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  13878735 tttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 13878660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 14018860 - 14018785
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||  ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  14018860 tttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 14018785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 13740380 - 13740306
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| |||||||||||||||||| |||  |||||||| || ||| || |||| ||| |||||||    
T  13740380 tttttagcgaatttggatttgtattgtattgatgtactttatcaatttgaatgaaagaatatcgtttgtttttgt 13740306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 28230823 - 28230749
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||||||||||||||||| |||| |||  | |||||| || ||| || |||| |||||||||||    
T  28230823 tttttagcgaatttgaatttgtattgtatcgatgtactctaacaatttgaatgaacgaatatcgtttatttttgt 28230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 35333900 - 35333974
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||| ||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| |||||||||||    
T  35333900 tttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 35333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 20607180 - 20607147
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatg 189  Q
    ||||||||||||||||||||||||||||| ||||    
T  20607180 tttttagcgactttgaatttgtattgtatcgatg 20607147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 201796 - 201731
Alignment:
Q  163 cgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||||||||||||||||||||||||  |||  ||||||||||| |||||  ||||||||||||||    
T  201796 cgactttgaatttgtattgtattgatttactctatcaatttaaatgaatgtatatcatttattttt 201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 24790905 - 24790829
Alignment:
Q  155 ttttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  24790905 ttttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 24790829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 2234204 - 2234129
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  2234204 tttttagcgaatttgaatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 2234129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 28296849 - 28296778
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttt 227  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||| || |||||| |||||||||||||    
T  28296849 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttt 28296778  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 2968910 - 2968982
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||| ||||||||||| |||||||||| |||| |||  |||||||| || |||||| |||| |||||||||    
T  2968910 tttttaacgactttgaatatgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 13575943 - 13575871
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||||||||||||| || |||||||||| |||| |||  ||||||||||| |||||| |||| | |||||||    
T  13575943 tttttagcgactttggatatgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtctattttt 13575871  T

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Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 9501963 - 9502038
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||||||  ||||||||||||||||| |||| |||  |||||||| || |||||| |||| |||| |||||||    
T  9501963 tttttagcgaacttgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgtc 9502038  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 11162281 - 11162356
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| ||| ||||||||| || |||||| |||| | || |||||||    
T  11162281 tttttagcgaatttggatttgtattgtatcgatgtactccatcaatttgaatgaatgaatatcgtatacttttgtc 11162356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 13977797 - 13977856
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    |||||||| ||||||| |||| |||  |||||||| ||||||||| ||||||||||||||    
T  13977797 tgaatttgcattgtatcgatgtactctatcaatttgaacgaatgaatatcatttattttt 13977856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 15286767 - 15286692
Alignment:
Q  156 tttttagcgactttgaattt-gtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| |||| |||||||||  ||| |||  ||||||||||| |||||| ||||||||||||||||    
T  15286767 tttttagcgaatttggattttgtattgtataaatgtactctatcaatttaaatgaatgaatatcatttatttttgt 15286692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 15467136 - 15467061
Alignment:
Q  156 tttttagcgactttgaattt-gtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| |||| |||| |||||||||  ||| |||  ||||||||||| |||||| ||||||||||||||||    
T  15467136 tttttagcgaatttggattttgtattgtataaatgtactctatcaatttaaatgaatgaatatcatttatttttgt 15467061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 31202843 - 31202918
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||| ||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  31202843 tttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 31202918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 39067424 - 39067349
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||| ||||||||| |||| |||  |||  ||||||||||| |||||| |||| ||||||||||||    
T  39067424 tttttagcgaatttaaatttgtatagtatcgatatactctatcaatttaaaagaatgaatatcgtttatttttgtc 39067349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 41362141 - 41362200
Alignment:
Q  169 tgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||||||||||||||||||| |||  |||||||| || |||||| |||| |||||||||    
T  41362141 tgaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 41362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 37613031 - 37613105
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||| ||| |||||||||||||||||| |||  |||  |||||||| || |||||| |||| |||||||||||    
T  37613031 tttttaacgaatttgaatttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttatttttgt 37613105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 298
Target Start/End: Complemental strand, 14918383 - 14918354
Alignment:
Q  269 tatcaatttaaacgaatgaatattatttat 298  Q
    ||||||||||||||||||||||||||||||    
T  14918383 tatcaatttaaacgaatgaatattatttat 14918354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 41996931 - 41996992
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    ||||||| ||| ||| |||| |||  ||||||||||| |||||| |||||||||||||||||    
T  41996931 gaatttgcattatatcgatgtactcgatcaatttaaatgaatgaatatcatttatttttgtc 41996992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 5990001 - 5990061
Alignment:
Q  170 gaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    ||||||| ||| |||||||| |||| || |||||||| |||||| | ||||||||||||||    
T  5990001 gaatttgcattctattgatgtactatattaatttaaatgaatgaatgtcatttatttttgt 5990061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9799735 - 9799679
Alignment:
Q  172 atttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||| |||||||||||| |||  |||||||| || |||||| ||||||||||||||    
T  9799735 atttgcattgtattgatgtactctatcaatttgaatgaatgaatatcatttattttt 9799679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 9802051 - 9802123
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttattttt 228  Q
    ||||||| ||||||||||||||||||||| |||| ||   | |||||| ||||||| | ||||||| ||||||    
T  9802051 tttttagtgactttgaatttgtattgtatcgatgtaccctaccaatttgaacgaataaatatcattcattttt 9802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 13570486 - 13570426
Alignment:
Q  171 aatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||||||| |||  |||  ||||||||||| |||||| |||| ||||||||||||    
T  13570486 aatttgtattgtatcgatatactctatcaatttaaatgaatgaatatcgtttatttttgtc 13570426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 31407485 - 31407429
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatg 212  Q
    |||||||||| ||||||||||||||||||  ||| |||| |||||||| || |||||    
T  31407485 tttttagcgaatttgaatttgtattgtatcaatgtactatatcaatttgaatgaatg 31407429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 74559 - 74634
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||| ||||||||||||| |||| |||  |||||||||||  ||||| |||| ||||||||||||    
T  74559 tttttagcgaatttggatttgtattgtatcgatgtactctatcaatttaaataaatgaatatcgtttatttttgtc 74634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 6856 - 6780
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaattt-aaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| |||||||||||||||||| |||| |||  |||||||| ||| |||||| |||| ||||| ||||||    
T  6856 tttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaaatgaatgaatatcgtttatatttgtc 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 3290 - 3365
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||||| ||| ||||| |||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  3290 tttttagcgaatttaaatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 3365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 35470 - 35545
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgtc 231  Q
    |||||||| | |||| ||||||||||||| |||| |||  |||||||| || |||||| |||| ||||||||||||    
T  35470 tttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtc 35545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 11294 - 11220
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||||||||| ||| ||||| |||||||| |||  |||  ||||||||||| |||| | ||||||||||||||||    
T  11294 tttttagcgattttaaatttttattgtatcgatatactctatcaatttaaatgaattaatatcatttatttttgt 11220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 403974 - 403900
Alignment:
Q  156 tttttagcgactttgaatttgtattgtattgatgcactacatcaatttaaacgaatgagtatcatttatttttgt 230  Q
    |||| ||||| |||||||||||||||||| |||| |||  || ||||| || |||||| |||| |||||||||||    
T  403974 ttttcagcgaatttgaatttgtattgtatcgatgtactctattaatttgaatgaatgaatatcgtttatttttgt 403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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