View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5273-Insertion-3 (Length: 133)
Name: NF5273-Insertion-3
Description: NF5273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5273-Insertion-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 119; Significance: 3e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 3e-61
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 36595221 - 36595095
Alignment:
| Q |
7 |
agggaagaccaaagtgctgtattttgagtcaattgcaaatccaagcttgaatgtggccaatactcctgagctagctaggattgcacacaaaaagggagtg |
106 |
Q |
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| T |
36595221 |
agggaagaccaaagtgctgtattttgagtcaattgcaaatccaagcttgaatgtggccaatactcctgagcttgctaggattgcacacaaaaagggagta |
36595122 |
T |
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| Q |
107 |
actgtggtggttgataacacctttgct |
133 |
Q |
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| T |
36595121 |
actgtggtggttgataacacctttgct |
36595095 |
T |
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