View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5274_high_7 (Length: 284)
Name: NF5274_high_7
Description: NF5274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5274_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 9 - 264
Target Start/End: Original strand, 5257232 - 5257487
Alignment:
| Q |
9 |
gcaagagaatatgtacacttatttcctttcctcaaggtgtgtaagaaggacaattaccaattgtaaccaaggaatctataaatagcatctactgttggag |
108 |
Q |
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| T |
5257232 |
gcaagagaatatgtacacttatttcctttcctcaaggtgtgtaagaaggacaattgccaattgtaaccaaggaatctataaatagcatctactgttggag |
5257331 |
T |
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| Q |
109 |
cacacatgtgagttggaactactcctatagtaactatatcaactgccattaaggaaccactaaataacatacgtgtaacctgttgcccaagttaactata |
208 |
Q |
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| T |
5257332 |
cacacatgtgagttggaactactcctatagtaactatatcaactgccattaaggaaccactaaataacatacgtgtaacctgttgcccaagttaactata |
5257431 |
T |
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| Q |
209 |
gaaaccatatctacgaatagcatctaccgctgaatatggccaataattcagcattc |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5257432 |
gaaaccatatctacgaatagcatctaccgctgaatatggccaataattcagcattc |
5257487 |
T |
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