View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5277-Insertion-8 (Length: 287)

Name: NF5277-Insertion-8
Description: NF5277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5277-Insertion-8
NF5277-Insertion-8
[»] chr5 (1 HSPs)
chr5 (8-287)||(8124669-8124948)


Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 287
Target Start/End: Original strand, 8124669 - 8124948
Alignment:
Q  8 taaagttcagaccttttttgatgatatattcataaacttgttcaattatgtatgtaaagtgcagatatgagagcttgcacttaaataggataaatggtat 107  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8124669 taaagttcagaccttttttgatgaaatattcataaacttgttcaattatgtatgtaaagtgcagatatgagagcttgcacttaaataggataaatggtat 8124768  T
Q  108 ggccaaggttcttggagtacttgcttctgttggaggagcttcaatcattaccctttacaagggacctaccatttatgctccacatttagcactacatcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8124769 ggccaaggttcttggagtacttgcttctgttggaggagcttcaatcattaccctttacaagggacctaccatttatgctccacatttagcactacatcaa 8124868  T
Q  208 ggacaaattttcttgtctgcatttgaggatgccaatgggaaaaacttgaacttgggtggcatccttctctttggtcattg 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8124869 ggacaaattttcttgtctgcatttgaggatgccaatgggaaaaacttgaacttgggtggcatccttctctttggtcattg 8124948  T

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