View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5283-Insertion-4 (Length: 285)
Name: NF5283-Insertion-4
Description: NF5283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5283-Insertion-4 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 27016035 - 27016280
Alignment:
| Q |
8 |
ctaagagatgaatgaacgcaccaactgatcagtatcattctttagtaacatgtttgatgttgttaaatcgccatgaacaagaccaccatcatgtaacttc |
107 |
Q |
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| T |
27016035 |
ctaagagacgaatgaactcaccaactgatcagtatcattctttagtaacatgtttgatgttgttaaatcgccatgaacaagaccaccatcatgtaacttc |
27016134 |
T |
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| Q |
108 |
gcaattacatcaccaatttgggatgcaatctttcccaggcgctcttcattgacaccgcatgatccgaattcaagaaatacatctttgaccgaaggtccgt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| | |
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| T |
27016135 |
gcaattacatcaccaatttgggatgcaatctttcccaagcgctcttcattgacaccacatgatccgaattcgagaaatacatctttgactgaaggtcctt |
27016234 |
T |
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| Q |
208 |
caacgaattcaaatgttaatgtgtgcaacacaggatcaacagcata |
253 |
Q |
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|||| |||||||||||||| ||||| | |||||||| |||||||| |
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| T |
27016235 |
caacaaattcaaatgttaaagtgtgtgatacaggatccacagcata |
27016280 |
T |
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