View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5284_high_23 (Length: 268)
Name: NF5284_high_23
Description: NF5284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5284_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 30289322 - 30289071
Alignment:
| Q |
1 |
agataaaattacattaaattagatagacgaaagtaacacatgcggtagagacttgtcataatctattcaagacttaacggataaaaaagtgattctaatt |
100 |
Q |
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| T |
30289322 |
agataaaattacattaaattagatagacgaaagtaacacatgcggtagagacttgtcataatctattcaagacttaacggataaaaaagtgattctaatt |
30289223 |
T |
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| Q |
101 |
caaactcttgttcagcaaacatgtctttttatatattggtgttagtctcgagtagtttatatttataatagtaatacaaaaatgtttatcagatgccaac |
200 |
Q |
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| T |
30289222 |
caaactcttgttcagcaaacatgtctttttatatatccgtgttagtctcgagtagtttatatttataatagtaatacaaaaatgtttatcagatgccaac |
30289123 |
T |
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| Q |
201 |
ataggtcggtcatatttataataggcattttgatcattaaatctcaacaaag |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30289122 |
ataggtcggtcatatttataataggcattttgatcattaaatctcaacaaag |
30289071 |
T |
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