View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5284_low_33 (Length: 227)
Name: NF5284_low_33
Description: NF5284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5284_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 62 - 214
Target Start/End: Original strand, 32905678 - 32905830
Alignment:
| Q |
62 |
tccccctcgcgctcctctctttcaaattcaaacacattcaatggctgatagctccaacgaagttcagacaaacatctaccgccaccttcaacctatcatc |
161 |
Q |
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| T |
32905678 |
tccccctcgcgctcctctctttcaaattcaaacacattcaatggctgatagctccaacgaagttcagacaaacatctaccgccaccttcaacctatcatc |
32905777 |
T |
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| Q |
162 |
tccgaacgtcttctaacaccggaacaggccgacactatcgtcaagttcatctc |
214 |
Q |
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||||||||||||||||||||||||||||| || |||||||||||||||||||| |
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| T |
32905778 |
tccgaacgtcttctaacaccggaacaggctgatactatcgtcaagttcatctc |
32905830 |
T |
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