View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5288_low_1 (Length: 440)

Name: NF5288_low_1
Description: NF5288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5288_low_1
NF5288_low_1
[»] chr8 (67 HSPs)
chr8 (1-413)||(3240102-3240515)
chr8 (180-397)||(18890669-18890889)
chr8 (180-356)||(24099266-24099446)
chr8 (186-402)||(1239362-1239581)
chr8 (180-402)||(8443476-8443704)
chr8 (180-376)||(41896416-41896615)
chr8 (185-402)||(5333337-5333553)
chr8 (219-413)||(39657391-39657589)
chr8 (186-402)||(15344217-15344432)
chr8 (186-402)||(15433282-15433497)
chr8 (186-402)||(15524586-15524801)
chr8 (239-402)||(1236662-1236824)
chr8 (262-397)||(29617244-29617379)
chr8 (180-294)||(14585605-14585718)
chr8 (285-402)||(8981170-8981287)
chr8 (239-402)||(14916152-14916315)
chr8 (180-412)||(23230550-23230777)
chr8 (180-412)||(7883196-7883423)
chr8 (181-378)||(8826116-8826311)
chr8 (286-402)||(21237798-21237914)
chr8 (181-402)||(45445776-45445994)
chr8 (197-413)||(471120-471333)
chr8 (166-367)||(20227281-20227483)
chr8 (262-342)||(36532906-36532986)
chr8 (239-401)||(37971247-37971406)
chr8 (174-378)||(27498354-27498553)
chr8 (200-341)||(24419202-24419342)
chr8 (266-343)||(28239846-28239923)
chr8 (210-412)||(10377625-10377823)
chr8 (180-402)||(20553206-20553429)
chr8 (180-402)||(40211267-40211488)
chr8 (181-231)||(21237702-21237752)
chr8 (180-402)||(20559709-20559929)
chr8 (180-402)||(20571271-20571491)
chr8 (187-297)||(34492973-34493084)
chr8 (266-343)||(44099928-44100005)
chr8 (183-283)||(40619154-40619253)
chr8 (239-412)||(16247178-16247348)
chr8 (322-413)||(42046265-42046356)
chr8 (168-320)||(36948484-36948633)
chr8 (180-402)||(14544868-14545085)
chr8 (166-236)||(24186786-24186858)
chr8 (264-337)||(33342448-33342521)
chr8 (266-342)||(9619352-9619428)
chr8 (266-342)||(43192341-43192417)
chr8 (266-337)||(19876224-19876295)
chr8 (180-301)||(43834063-43834183)
chr8 (180-342)||(3673350-3673505)
chr8 (239-357)||(34609794-34609911)
chr8 (289-367)||(39450552-39450630)
chr8 (266-342)||(2655883-2655959)
chr8 (266-342)||(4808977-4809053)
chr8 (266-342)||(11464184-11464260)
chr8 (261-355)||(25191079-25191170)
chr8 (255-343)||(26469232-26469320)
chr8 (264-340)||(33298866-33298942)
chr8 (234-281)||(5917714-5917761)
chr8 (266-337)||(11196902-11196973)
chr8 (264-343)||(27747107-27747186)
chr8 (214-264)||(8981126-8981176)
chr8 (259-341)||(18734026-18734107)
chr8 (292-402)||(33214636-33214746)
chr8 (322-411)||(14585721-14585810)
chr8 (266-343)||(16794305-16794382)
chr8 (239-402)||(17693579-17693739)
chr8 (181-222)||(26469338-26469379)
chr8 (263-327)||(39646227-39646291)
[»] chr1 (75 HSPs)
chr1 (167-402)||(47132793-47133028)
chr1 (183-377)||(12635076-12635270)
chr1 (180-395)||(49626816-49627031)
chr1 (166-402)||(44543163-44543397)
chr1 (181-378)||(16161739-16161939)
chr1 (180-398)||(1742187-1742402)
chr1 (143-397)||(36775682-36775938)
chr1 (239-402)||(24582913-24583075)
chr1 (180-359)||(40163507-40163685)
chr1 (189-390)||(41994337-41994540)
chr1 (180-402)||(21947585-21947803)
chr1 (181-402)||(16262768-16262986)
chr1 (180-412)||(7337620-7337848)
chr1 (180-305)||(32679159-32679285)
chr1 (180-381)||(9341630-9341830)
chr1 (166-357)||(15492184-15492379)
chr1 (144-402)||(19060772-19061034)
chr1 (180-413)||(34413048-34413276)
chr1 (180-402)||(23291609-23291828)
chr1 (168-412)||(8211868-8212107)
chr1 (242-376)||(34528695-34528829)
chr1 (180-402)||(45415466-45415683)
chr1 (180-396)||(13144785-13144997)
chr1 (180-412)||(35484348-35484576)
chr1 (234-397)||(48750138-48750305)
chr1 (180-412)||(5983744-5983971)
chr1 (186-379)||(6217817-6218007)
chr1 (180-299)||(13075703-13075821)
chr1 (233-404)||(31692432-31692602)
chr1 (180-266)||(1602022-1602106)
chr1 (180-412)||(14872547-14872774)
chr1 (264-342)||(39927549-39927627)
chr1 (293-402)||(44915655-44915764)
chr1 (266-342)||(34519142-34519218)
chr1 (180-244)||(37720243-37720306)
chr1 (261-402)||(34878245-34878383)
chr1 (180-283)||(35462120-35462222)
chr1 (180-412)||(32394905-32395133)
chr1 (189-402)||(43412285-43412499)
chr1 (180-291)||(15434950-15435058)
chr1 (183-283)||(15836102-15836201)
chr1 (165-395)||(30506146-30506376)
chr1 (233-343)||(5855879-5855989)
chr1 (183-252)||(31918899-31918966)
chr1 (268-342)||(39987401-39987475)
chr1 (180-342)||(11462475-11462632)
chr1 (266-338)||(5701269-5701341)
chr1 (266-342)||(9687199-9687275)
chr1 (266-342)||(9919399-9919475)
chr1 (266-342)||(19715890-19715966)
chr1 (266-342)||(28035149-28035225)
chr1 (266-342)||(35584613-35584689)
chr1 (294-402)||(45789558-45789666)
chr1 (239-320)||(21686838-21686916)
chr1 (182-378)||(27580119-27580310)
chr1 (180-231)||(29738770-29738821)
chr1 (288-397)||(37720121-37720234)
chr1 (264-343)||(44637429-44637508)
chr1 (175-291)||(10776536-10776648)
chr1 (264-342)||(18569305-18569383)
chr1 (239-281)||(27469680-27469722)
chr1 (180-272)||(31984087-31984176)
chr1 (84-130)||(32679334-32679380)
chr1 (292-354)||(40163444-40163506)
chr1 (293-402)||(18939336-18939444)
chr1 (180-281)||(39888099-39888199)
chr1 (266-338)||(7997799-7997871)
chr1 (266-342)||(9172500-9172576)
chr1 (266-342)||(9180482-9180558)
chr1 (361-413)||(24597280-24597332)
chr1 (266-338)||(31836817-31836889)
chr1 (286-342)||(40646700-40646756)
chr1 (266-334)||(40881015-40881083)
chr1 (266-338)||(50272139-50272211)
chr1 (266-342)||(51868640-51868716)
[»] chr7 (67 HSPs)
chr7 (180-401)||(41553402-41553623)
chr7 (180-399)||(41553749-41553968)
chr7 (180-399)||(41554094-41554313)
chr7 (180-413)||(28476126-28476362)
chr7 (146-413)||(24350795-24351063)
chr7 (187-402)||(38880545-38880761)
chr7 (180-402)||(24069361-24069584)
chr7 (81-402)||(22742745-22743068)
chr7 (180-412)||(9450094-9450322)
chr7 (180-402)||(30756786-30757004)
chr7 (209-402)||(3224378-3224575)
chr7 (180-398)||(3394377-3394596)
chr7 (180-402)||(37837425-37837644)
chr7 (183-412)||(42978518-42978744)
chr7 (180-398)||(11343703-11343930)
chr7 (180-412)||(34899564-34899792)
chr7 (180-412)||(48316769-48316997)
chr7 (166-376)||(1749140-1749343)
chr7 (234-397)||(35132899-35133066)
chr7 (244-367)||(5775172-5775294)
chr7 (166-374)||(26623784-26623989)
chr7 (181-412)||(12141265-12141491)
chr7 (146-398)||(39328761-39329012)
chr7 (210-412)||(19296806-19297004)
chr7 (180-291)||(47590217-47590327)
chr7 (233-303)||(48930724-48930794)
chr7 (239-401)||(8001514-8001673)
chr7 (166-367)||(44311794-44311996)
chr7 (264-343)||(32521921-32522000)
chr7 (180-283)||(38051150-38051253)
chr7 (180-390)||(35665114-35665317)
chr7 (262-343)||(29617726-29617807)
chr7 (189-343)||(969473-969630)
chr7 (185-366)||(39228926-39229102)
chr7 (180-283)||(40993088-40993190)
chr7 (192-377)||(32675380-32675565)
chr7 (180-412)||(39171547-39171776)
chr7 (180-273)||(13797025-13797117)
chr7 (180-342)||(48061329-48061486)
chr7 (239-343)||(6002000-6002104)
chr7 (146-282)||(11653751-11653886)
chr7 (168-402)||(19404724-19404952)
chr7 (239-367)||(22087281-22087406)
chr7 (180-341)||(25067990-25068147)
chr7 (239-378)||(5348583-5348719)
chr7 (266-343)||(31235786-31235863)
chr7 (266-342)||(1448825-1448901)
chr7 (266-342)||(23786581-23786657)
chr7 (241-402)||(38798747-38798905)
chr7 (197-318)||(4121734-4121856)
chr7 (266-342)||(14627874-14627950)
chr7 (269-341)||(19560007-19560079)
chr7 (266-342)||(20116588-20116664)
chr7 (266-338)||(32684674-32684746)
chr7 (266-342)||(35496170-35496246)
chr7 (266-342)||(35667227-35667303)
chr7 (181-248)||(5078513-5078579)
chr7 (266-301)||(26583720-26583755)
chr7 (266-337)||(42067061-42067132)
chr7 (266-338)||(1100763-1100838)
chr7 (239-366)||(9977209-9977333)
chr7 (266-342)||(22927865-22927941)
chr7 (181-213)||(26583644-26583676)
chr7 (266-342)||(34773717-34773793)
chr7 (266-342)||(46339060-46339136)
chr7 (278-342)||(46818411-46818475)
chr7 (266-342)||(46822021-46822097)
[»] chr2 (77 HSPs)
chr2 (88-402)||(29574596-29574910)
chr2 (81-319)||(12647971-12648208)
chr2 (181-402)||(24461351-24461575)
chr2 (180-402)||(32448587-32448808)
chr2 (180-367)||(6358874-6359063)
chr2 (181-413)||(3308853-3309088)
chr2 (233-402)||(10929627-10929797)
chr2 (81-402)||(37994090-37994416)
chr2 (234-413)||(10237173-10237356)
chr2 (166-342)||(43397147-43397320)
chr2 (181-378)||(4904137-4904330)
chr2 (180-402)||(38445080-38445298)
chr2 (180-349)||(14955436-14955608)
chr2 (242-397)||(17249120-17249274)
chr2 (330-402)||(12647077-12647149)
chr2 (180-376)||(4264386-4264578)
chr2 (192-396)||(31210581-31210781)
chr2 (180-278)||(36691788-36691885)
chr2 (239-402)||(1415529-1415689)
chr2 (180-342)||(4099017-4099175)
chr2 (180-402)||(7448161-7448379)
chr2 (180-291)||(4041670-4041780)
chr2 (180-412)||(9169216-9169443)
chr2 (180-390)||(14423236-14423445)
chr2 (174-398)||(31788364-31788584)
chr2 (181-381)||(23933608-23933806)
chr2 (180-412)||(1421589-1421818)
chr2 (180-412)||(4778667-4778895)
chr2 (180-320)||(7646387-7646523)
chr2 (180-340)||(11985260-11985416)
chr2 (186-402)||(27097374-27097585)
chr2 (168-398)||(30400007-30400235)
chr2 (241-342)||(34128712-34128813)
chr2 (180-389)||(6436521-6436726)
chr2 (180-412)||(7677831-7678057)
chr2 (180-342)||(5427896-5428052)
chr2 (180-281)||(29173805-29173905)
chr2 (180-402)||(33923615-33923837)
chr2 (180-342)||(36943149-36943309)
chr2 (185-343)||(35220245-35220398)
chr2 (266-378)||(41694618-41694729)
chr2 (264-342)||(459269-459347)
chr2 (146-288)||(19062431-19062572)
chr2 (263-381)||(28533943-28534061)
chr2 (180-270)||(29279667-29279756)
chr2 (180-402)||(18763381-18763600)
chr2 (168-229)||(19596013-19596073)
chr2 (292-381)||(36175485-36175574)
chr2 (262-379)||(37416702-37416819)
chr2 (264-341)||(37614121-37614198)
chr2 (266-342)||(3725190-3725266)
chr2 (266-342)||(8805876-8805952)
chr2 (266-342)||(27249146-27249222)
chr2 (268-343)||(27949438-27949513)
chr2 (268-342)||(36234020-36234094)
chr2 (266-342)||(9986337-9986413)
chr2 (180-283)||(31128864-31128965)
chr2 (266-342)||(31580584-31580660)
chr2 (266-342)||(34598997-34599073)
chr2 (288-367)||(11812701-11812780)
chr2 (235-338)||(24587687-24587790)
chr2 (234-281)||(25237298-25237345)
chr2 (266-341)||(30420688-30420763)
chr2 (292-402)||(17151445-17151555)
chr2 (80-118)||(18107983-18108021)
chr2 (292-366)||(28871792-28871866)
chr2 (170-231)||(16261268-16261328)
chr2 (189-280)||(16375872-16375960)
chr2 (239-344)||(23903376-23903480)
chr2 (266-342)||(2808467-2808543)
chr2 (266-338)||(7015710-7015782)
chr2 (234-352)||(7443465-7443585)
chr2 (266-368)||(18107749-18107848)
chr2 (268-344)||(18113881-18113957)
chr2 (220-300)||(20145797-20145876)
chr2 (266-342)||(26025405-26025481)
chr2 (180-264)||(28871864-28871948)
[»] chr3 (88 HSPs)
chr3 (180-397)||(29921956-29922173)
chr3 (180-397)||(29971109-29971326)
chr3 (182-398)||(35175304-35175521)
chr3 (182-385)||(12947258-12947464)
chr3 (186-398)||(29239247-29239460)
chr3 (180-381)||(53508124-53508326)
chr3 (180-378)||(51487004-51487207)
chr3 (186-412)||(14859396-14859621)
chr3 (181-385)||(4821713-4821911)
chr3 (180-402)||(36461398-36461616)
chr3 (166-413)||(16235307-16235558)
chr3 (180-376)||(21289807-21290006)
chr3 (81-259)||(50194390-50194567)
chr3 (180-301)||(42460650-42460766)
chr3 (189-376)||(27706219-27706409)
chr3 (186-390)||(53807837-53808045)
chr3 (180-402)||(43488557-43488775)
chr3 (180-412)||(6954653-6954881)
chr3 (234-413)||(51923676-51923859)
chr3 (180-396)||(4396307-4396517)
chr3 (226-365)||(7546555-7546699)
chr3 (190-402)||(8914618-8914833)
chr3 (187-380)||(44804934-44805129)
chr3 (233-357)||(41818164-41818287)
chr3 (180-402)||(47042015-47042237)
chr3 (180-320)||(10108140-10108275)
chr3 (180-320)||(10232974-10233109)
chr3 (227-378)||(32246393-32246544)
chr3 (261-378)||(7805475-7805592)
chr3 (180-342)||(9998371-9998528)
chr3 (234-413)||(51303599-51303782)
chr3 (181-395)||(20464944-20465154)
chr3 (184-342)||(21533836-21533990)
chr3 (180-402)||(47896055-47896273)
chr3 (263-365)||(29249215-29249317)
chr3 (180-412)||(52923074-52923302)
chr3 (180-337)||(22290841-22290998)
chr3 (210-412)||(32701426-32701622)
chr3 (180-381)||(10229380-10229576)
chr3 (180-342)||(40487228-40487387)
chr3 (323-402)||(628890-628969)
chr3 (180-381)||(35864920-35865119)
chr3 (180-396)||(48650707-48650919)
chr3 (181-320)||(9319961-9320096)
chr3 (174-291)||(21431522-21431638)
chr3 (249-366)||(26739360-26739477)
chr3 (180-342)||(38860147-38860304)
chr3 (180-310)||(45568504-45568629)
chr3 (239-319)||(25842634-25842714)
chr3 (168-236)||(33579759-33579827)
chr3 (330-402)||(50194302-50194374)
chr3 (243-342)||(3606738-3606837)
chr3 (288-359)||(52496934-52497005)
chr3 (180-412)||(9797491-9797714)
chr3 (189-291)||(40556624-40556725)
chr3 (180-342)||(54148892-54149053)
chr3 (266-343)||(22803025-22803102)
chr3 (266-343)||(36906125-36906202)
chr3 (180-311)||(36910699-36910826)
chr3 (239-398)||(38545760-38545916)
chr3 (189-281)||(52116093-52116187)
chr3 (180-342)||(1649323-1649480)
chr3 (180-252)||(20987913-20987984)
chr3 (266-338)||(21488094-21488166)
chr3 (266-342)||(35499193-35499269)
chr3 (266-342)||(46934645-46934721)
chr3 (266-342)||(49552219-49552295)
chr3 (264-342)||(36734687-36734765)
chr3 (239-295)||(4019695-4019752)
chr3 (167-310)||(12149843-12149982)
chr3 (81-122)||(29921857-29921898)
chr3 (81-122)||(29971010-29971051)
chr3 (183-288)||(31271885-31271989)
chr3 (292-381)||(48199788-48199877)
chr3 (266-342)||(4178568-4178644)
chr3 (180-291)||(12050723-12050832)
chr3 (266-342)||(12116101-12116177)
chr3 (266-342)||(25162439-25162515)
chr3 (266-342)||(42719520-42719596)
chr3 (266-341)||(32607472-32607547)
chr3 (174-291)||(37040669-37040782)
chr3 (241-320)||(43564758-43564837)
chr3 (189-342)||(44959979-44960128)
chr3 (291-378)||(7887434-7887523)
chr3 (264-342)||(31794072-31794150)
chr3 (180-212)||(7887562-7887594)
chr3 (180-291)||(18010922-18011033)
chr3 (266-342)||(25631521-25631597)
[»] chr6 (53 HSPs)
chr6 (166-412)||(30493420-30493665)
chr6 (180-397)||(8102624-8102844)
chr6 (181-390)||(32191709-32191916)
chr6 (181-401)||(1933660-1933882)
chr6 (143-379)||(26588462-26588689)
chr6 (191-413)||(7976143-7976355)
chr6 (166-412)||(28981067-28981310)
chr6 (180-300)||(30776570-30776689)
chr6 (180-413)||(545928-546165)
chr6 (255-402)||(31296796-31296943)
chr6 (180-412)||(33053125-33053353)
chr6 (174-412)||(23128517-23128751)
chr6 (146-412)||(3913531-3913794)
chr6 (180-413)||(1523310-1523542)
chr6 (190-402)||(14801735-14801950)
chr6 (262-366)||(22571457-22571562)
chr6 (180-402)||(32327184-32327402)
chr6 (175-367)||(11321471-11321659)
chr6 (239-402)||(31852160-31852315)
chr6 (174-283)||(34018459-34018567)
chr6 (180-401)||(606109-606326)
chr6 (167-377)||(678996-679207)
chr6 (180-320)||(68050-68186)
chr6 (226-404)||(528315-528493)
chr6 (188-402)||(127583-127792)
chr6 (225-377)||(19164657-19164809)
chr6 (266-342)||(25064242-25064318)
chr6 (184-320)||(7515251-7515382)
chr6 (266-341)||(28635117-28635192)
chr6 (275-357)||(34222793-34222876)
chr6 (210-402)||(29319845-29320034)
chr6 (166-291)||(32059798-32059924)
chr6 (239-349)||(34185713-34185823)
chr6 (144-229)||(22571358-22571442)
chr6 (264-337)||(34489254-34489327)
chr6 (266-342)||(23947313-23947389)
chr6 (264-342)||(25337574-25337652)
chr6 (266-342)||(4984562-4984638)
chr6 (266-342)||(8496973-8497049)
chr6 (292-412)||(12170481-12170601)
chr6 (266-342)||(12652950-12653026)
chr6 (266-342)||(33110617-33110693)
chr6 (233-402)||(3355074-3355240)
chr6 (266-301)||(4088466-4088501)
chr6 (266-341)||(10228685-10228760)
chr6 (241-349)||(13546683-13546788)
chr6 (239-295)||(5417155-5417212)
chr6 (239-312)||(31575564-31575637)
chr6 (266-343)||(35001596-35001673)
chr6 (180-252)||(12170400-12170471)
chr6 (143-227)||(14801074-14801158)
chr6 (266-338)||(16419164-16419236)
chr6 (264-300)||(33543657-33543693)
[»] chr5 (57 HSPs)
chr5 (180-402)||(10332515-10332737)
chr5 (180-412)||(28540863-28541098)
chr5 (180-413)||(2979262-2979498)
chr5 (166-397)||(8088184-8088412)
chr5 (180-412)||(38597700-38597928)
chr5 (234-413)||(14211176-14211359)
chr5 (180-399)||(24229754-24229970)
chr5 (174-412)||(13007126-13007360)
chr5 (180-402)||(19103434-19103659)
chr5 (180-303)||(39567198-39567320)
chr5 (180-412)||(6012095-6012323)
chr5 (233-402)||(35920963-35921132)
chr5 (180-402)||(14726428-14726647)
chr5 (174-402)||(9113692-9113916)
chr5 (180-402)||(11976902-11977122)
chr5 (166-402)||(38007245-38007479)
chr5 (167-236)||(8985062-8985132)
chr5 (180-273)||(8096590-8096683)
chr5 (180-288)||(6216802-6216909)
chr5 (307-367)||(31315934-31315994)
chr5 (183-402)||(31391720-31391938)
chr5 (180-320)||(26825334-26825469)
chr5 (239-366)||(35850760-35850884)
chr5 (275-368)||(31364469-31364558)
chr5 (266-341)||(36344487-36344562)
chr5 (180-412)||(11073857-11074085)
chr5 (255-364)||(19120887-19120995)
chr5 (266-343)||(34881726-34881803)
chr5 (266-342)||(41184435-41184511)
chr5 (235-342)||(7613053-7613160)
chr5 (339-402)||(8984922-8984985)
chr5 (262-395)||(13421917-13422047)
chr5 (262-377)||(16758521-16758636)
chr5 (293-412)||(34945405-34945524)
chr5 (239-313)||(1582147-1582221)
chr5 (239-313)||(1602594-1602668)
chr5 (264-342)||(42886484-42886562)
chr5 (168-291)||(14082448-14082567)
chr5 (180-269)||(15571389-15571477)
chr5 (181-412)||(25980062-25980289)
chr5 (266-342)||(2057833-2057909)
chr5 (289-357)||(41214646-41214714)
chr5 (266-337)||(30298216-30298287)
chr5 (180-230)||(7036131-7036181)
chr5 (180-252)||(26878195-26878264)
chr5 (255-343)||(37986139-37986224)
chr5 (81-122)||(8985180-8985221)
chr5 (180-252)||(34945325-34945395)
chr5 (262-343)||(38110974-38111055)
chr5 (332-381)||(39567321-39567370)
chr5 (233-297)||(9591034-9591098)
chr5 (266-342)||(19259807-19259882)
chr5 (266-342)||(26578260-26578336)
chr5 (266-342)||(27266854-27266930)
chr5 (266-342)||(27576345-27576421)
chr5 (166-250)||(41749211-41749295)
chr5 (266-338)||(43261818-43261890)
[»] chr4 (92 HSPs)
chr4 (180-398)||(22300768-22300987)
chr4 (143-413)||(52944198-52944464)
chr4 (195-402)||(28857339-28857544)
chr4 (186-376)||(51888204-51888396)
chr4 (180-413)||(9643304-9643541)
chr4 (146-402)||(36204346-36204601)
chr4 (205-397)||(33332541-33332735)
chr4 (146-398)||(36161603-36161849)
chr4 (166-402)||(22038769-22039000)
chr4 (182-381)||(48351174-48351367)
chr4 (180-402)||(9713831-9714054)
chr4 (234-377)||(36194679-36194826)
chr4 (180-402)||(22611107-22611325)
chr4 (223-402)||(6155193-6155370)
chr4 (180-401)||(13634039-13634256)
chr4 (180-402)||(26633638-26633856)
chr4 (180-401)||(32766438-32766655)
chr4 (180-397)||(4142724-4142939)
chr4 (180-396)||(18048809-18049019)
chr4 (180-402)||(21686209-21686426)
chr4 (182-412)||(2520703-2520931)
chr4 (180-342)||(35348229-35348389)
chr4 (234-378)||(27651914-27652062)
chr4 (199-312)||(42032578-42032691)
chr4 (241-381)||(52933931-52934072)
chr4 (239-402)||(53444100-53444260)
chr4 (255-339)||(43853437-43853521)
chr4 (219-366)||(31891290-31891441)
chr4 (180-402)||(53810952-53811170)
chr4 (168-400)||(38166199-38166430)
chr4 (264-341)||(2624512-2624589)
chr4 (184-402)||(19853479-19853693)
chr4 (168-236)||(47158139-47158207)
chr4 (255-378)||(1621495-1621619)
chr4 (180-401)||(24099035-24099255)
chr4 (168-367)||(31359749-31359950)
chr4 (266-343)||(868180-868257)
chr4 (181-319)||(29120413-29120547)
chr4 (189-273)||(33920984-33921067)
chr4 (182-349)||(4937757-4937922)
chr4 (181-288)||(29961002-29961109)
chr4 (248-319)||(37683878-37683949)
chr4 (180-291)||(44596588-44596698)
chr4 (186-300)||(47320460-47320581)
chr4 (180-298)||(35395741-35395861)
chr4 (181-412)||(17949281-17949508)
chr4 (181-412)||(17953133-17953360)
chr4 (277-342)||(44947441-44947506)
chr4 (266-343)||(53616644-53616721)
chr4 (180-398)||(54021785-54021998)
chr4 (266-342)||(4643876-4643952)
chr4 (180-283)||(22558548-22558649)
chr4 (266-342)||(25273901-25273977)
chr4 (180-380)||(37030187-37030381)
chr4 (266-342)||(47417680-47417756)
chr4 (181-273)||(52978749-52978839)
chr4 (180-291)||(5119263-5119373)
chr4 (266-337)||(21090170-21090241)
chr4 (266-341)||(29965653-29965728)
chr4 (266-341)||(51318003-51318078)
chr4 (239-367)||(12199695-12199820)
chr4 (264-342)||(35964970-35965048)
chr4 (207-343)||(7393217-7393354)
chr4 (266-343)||(12265473-12265549)
chr4 (259-378)||(18935777-18935900)
chr4 (242-283)||(49072811-49072852)
chr4 (266-342)||(9528872-9528948)
chr4 (266-342)||(10359542-10359618)
chr4 (266-338)||(10389753-10389825)
chr4 (207-283)||(11300074-11300150)
chr4 (288-380)||(37465511-37465603)
chr4 (266-342)||(43154009-43154085)
chr4 (180-320)||(43510123-43510257)
chr4 (266-342)||(49410241-49410317)
chr4 (180-291)||(56040721-56040829)
chr4 (288-367)||(2069582-2069661)
chr4 (180-227)||(9634598-9634645)
chr4 (150-205)||(28857272-28857327)
chr4 (275-342)||(50766507-50766574)
chr4 (264-342)||(18138908-18138986)
chr4 (264-342)||(49126121-49126199)
chr4 (186-300)||(14121784-14121900)
chr4 (239-344)||(21365089-21365193)
chr4 (181-226)||(37188694-37188739)
chr4 (180-281)||(40066140-40066240)
chr4 (266-342)||(9283929-9284005)
chr4 (264-300)||(9645586-9645622)
chr4 (306-394)||(22806588-22806676)
chr4 (180-212)||(33332756-33332788)
chr4 (266-342)||(38706705-38706781)
chr4 (266-342)||(43444411-43444487)
chr4 (266-342)||(56194619-56194695)
[»] scaffold0009 (1 HSPs)
scaffold0009 (81-402)||(58055-58363)
[»] scaffold0347 (1 HSPs)
scaffold0347 (239-402)||(5989-6152)
[»] scaffold0039 (1 HSPs)
scaffold0039 (180-413)||(93003-93240)
[»] scaffold0042 (1 HSPs)
scaffold0042 (201-413)||(92452-92664)
[»] scaffold0017 (1 HSPs)
scaffold0017 (180-402)||(32714-32933)
[»] scaffold0888 (1 HSPs)
scaffold0888 (234-378)||(1669-1817)
[»] scaffold0445 (1 HSPs)
scaffold0445 (180-364)||(1247-1428)
[»] scaffold0127 (1 HSPs)
scaffold0127 (180-402)||(15395-15614)
[»] scaffold0136 (2 HSPs)
scaffold0136 (168-342)||(10069-10238)
scaffold0136 (180-272)||(37950-38040)
[»] scaffold0026 (1 HSPs)
scaffold0026 (180-402)||(71831-72049)
[»] scaffold0088 (1 HSPs)
scaffold0088 (180-272)||(50690-50781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (262-341)||(36683-36762)
[»] scaffold0426 (1 HSPs)
scaffold0426 (266-342)||(6311-6387)
[»] scaffold0603 (1 HSPs)
scaffold0603 (180-283)||(7619-7722)
[»] scaffold0095 (1 HSPs)
scaffold0095 (289-367)||(9396-9474)
[»] scaffold0884 (1 HSPs)
scaffold0884 (180-342)||(2000-2156)
[»] scaffold0634 (1 HSPs)
scaffold0634 (167-310)||(8403-8542)
[»] scaffold0495 (1 HSPs)
scaffold0495 (266-341)||(5404-5479)
[»] scaffold0014 (1 HSPs)
scaffold0014 (266-337)||(201372-201443)
[»] scaffold0262 (1 HSPs)
scaffold0262 (180-253)||(1932-2003)
[»] scaffold0002 (1 HSPs)
scaffold0002 (264-342)||(453936-454014)
[»] scaffold0372 (1 HSPs)
scaffold0372 (239-344)||(9613-9717)
[»] scaffold0015 (1 HSPs)
scaffold0015 (288-349)||(4072-4133)
[»] scaffold0064 (1 HSPs)
scaffold0064 (322-390)||(19053-19121)


Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 3240102 - 3240515
Alignment:
Q  1 aacaactgaaaaaatgcatttgcatttaaaatttgaacgtaagcattcatcacagctctctacaattctttaccaacaatttctctctaagttttctttc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3240102 aacaactgaaaaaatgcatttgcatttaaaatttgaacgtaagcaatcaacacagctctctacaattctttaccaagaatttttctctaagttttctttc 3240201  T
Q  101 tctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtat-tcttttttcatttcctttcaatctaaataagtga 199  Q
    |||| | |||||||||||||||   |||||| |||        ||||||||||||||||| | || | ||||||||||||||||||||||||||||||||    
T  3240202 tcttccggtcgttgaggaggggtgattttaggtcattttttttatctagaatcacccatctgcatcttttttttcatttcctttcaatctaaataagtga 3240301  T
Q  200 tttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatt 299  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |  | ||||||||||| |||||||||||| ||||||||||||    
T  3240302 tttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgtgtacatcattgtgttgttcgtcgtcttgtacgacgttgtttgatt 3240401  T
Q  300 tcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccgg 399  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |    
T  3240402 tcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatattcaatcgatgatttggacgccaatgttgcagatccag 3240501  T
Q  400 aagtaggggtattc 413  Q
    ||||| ||||||||    
T  3240502 aagtatgggtattc 3240515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 180 - 397
Target Start/End: Complemental strand, 18890889 - 18890669
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||  ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  18890889 ctttcaatctaaataagtgattttcacatgcatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 18890791  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgt----tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| || |||||||||||||||| |||| |    |||||||||  |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||    
T  18890790 ttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatt 18890691  T
Q  376 tggacgccaatgttgtagatcc 397  Q
    ||| || ||| |||| ||||||    
T  18890690 tgggcgtcaacgttgcagatcc 18890669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 180 - 356
Target Start/End: Complemental strand, 24099446 - 24099266
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt----ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcat 275  Q
    ||||| || ||||||||||||||||| ||| ||||||||||||||||| ||| ||    ||| ||||||||||||||| ||||||||||||||||||| |    
T  24099446 ctttcgatttaaataagtgatttccacatagatcaagtgttttcttttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgt 24099347  T
Q  276 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatc 356  Q
    |||| ||||| ||||||||||||||||| | |||||| |||||| |||||||| ||||||||| |||||||||| ||||||    
T  24099346 cgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtcaatc 24099266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 186 - 402
Target Start/End: Complemental strand, 1239581 - 1239362
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat----gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    ||||||||||||||||| || | |||||| |||||||||||||||| ||||  |    |||||||||||||  ||||||| |||||||||||||||||||    
T  1239581 atctaaataagtgattttcacaaatatcaggtgttttcttttgtgtttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtctt 1239482  T
Q  282 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    || |||||||||||||||| || | |||||| |||| ||  |||||| |||||||||||||| ||||| |||||||||||||||||  ||||| ||||||    
T  1239481 gtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacg 1239383  T
Q  382 ccaatgttgtagatccggaag 402  Q
     ||| |||| |||||| ||||    
T  1239382 tcaacgttgcagatccagaag 1239362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 8443704 - 8443476
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc-------atgatttcgtcgtctgtgtgcgacgttgtgttgtt 272  Q
    ||||| |||||||||||||||||||| ||||||| || |||||||||||||| ||||        |||||||||||||||  |||||  |||||||||||    
T  8443704 ctttcgatctaaataagtgatttccacatatatccag-gttttcttttgtgttttttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgtt 8443606  T
Q  273 catcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatg 372  Q
    | ||||||||| ||||||||||||||| ||||| ||||||  |||||  ||||||| |  ||||||||||| ||||| |||||||||||||||||  |||    
T  8443605 cgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatcacatattcaatcaatg 8443506  T
Q  373 atttggacgccaatgttgtagatccggaag 402  Q
    ||||||||  ||| |||| |||||||||||    
T  8443505 atttggacatcaacgttgcagatccggaag 8443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 376
Target Start/End: Original strand, 41896416 - 41896615
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||  ||||||| |||||||| |||| ||||| ||||||| ||||||  || |||||||||||||||  |||||    
T  41896416 ctttcaatctaaataagtgattttcacatccatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtacgacgttgtgttgttggtcgtc 41896514  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| ||||||||||||||||| |   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| |||||||| ||||||    
T  41896515 ttgtgcggcgttgtttgatttcacatattttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatt 41896614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 185 - 402
Target Start/End: Original strand, 5333337 - 5333553
Alignment:
Q  185 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    |||| ||| |||||||||  | ||||||||||| || | |||||| | |||||| ||||||||| |||| |||||  |||||||||||| |||||||||     
T  5333337 aatcaaaacaagtgatttatacatatatcaagttttat-ttttgtattttttcaagatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtg 5333435  T
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 384  Q
    ||| |||||||||||| |||| |||||  ||||||  |||||||  ||||||||||||| ||||| |||||||||||||||||  || |||||| || ||    
T  5333436 cggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtca 5333535  T
Q  385 atgttgtagatccggaag 402  Q
    | ||||||||||| ||||    
T  5333536 acgttgtagatccagaag 5333553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 413
Target Start/End: Original strand, 39657391 - 39657589
Alignment:
Q  219 ttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--g 314  Q
    |||||||| |||| ||||| ||||||||||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||   |||||||||  |    
T  39657391 ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcg 39657490  T
Q  315 gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||||  |||||||  ||||||||||| |||||||  |||||| | |||||||  |||||||||||| ||| |||| |||||| |||| | ||||||||    
T  39657491 gtgttcgtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattc 39657589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 402
Target Start/End: Original strand, 15344217 - 15344432
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15344217 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15344316  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15344317 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15344415  T
Q  386 tgttgtagatccggaag 402  Q
     |||| |||||| ||||    
T  15344416 cgttgcagatccagaag 15344432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 402
Target Start/End: Original strand, 15433282 - 15433497
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15433282 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15433381  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15433382 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15433480  T
Q  386 tgttgtagatccggaag 402  Q
     |||| |||||| ||||    
T  15433481 cgttgcagatccagaag 15433497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 402
Target Start/End: Original strand, 15524586 - 15524801
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    ||||||||||||||||| || | |||||||| |||||||||||||  ||||  | |||| |||||||  |||| || ||||||||||| ||||||||| |    
T  15524586 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttttgtaattttgtcgtctaagtgcaaccttgtgttgttcgtcgtcttgtgc 15524685  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    ||||| |||||||||  | | |||||| |||| ||  |||||| ||||||||||||||  |||| ||||||||| |||||||  |||||||||||| |||    
T  15524686 ggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaa 15524784  T
Q  386 tgttgtagatccggaag 402  Q
     |||| |||||| ||||    
T  15524785 cgttgcagatccagaag 15524801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 402
Target Start/End: Complemental strand, 1236824 - 1236662
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  ||||||| ||||||||||| | ||||||| |||||||||||||||| || | |||||| |||| ||  |||||| |||||||||    
T  1236824 tgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaa 1236726  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||| ||||| |||||||||||||||||  ||||| |||||| ||| |||| |||||| ||||    
T  1236725 gatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaag 1236662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 262 - 397
Target Start/End: Complemental strand, 29617379 - 29617244
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 361  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||| ||||||  |||||||  |||||||||| || ||||| ||||||||| |    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacaga 29617280  T
Q  362 ttcaattgatgatttggacgccaatgttgtagatcc 397  Q
    ||||||  |||||||||||| ||| |||| ||||||    
T  29617279 ttcaatcaatgatttggacgtcaacgttgcagatcc 29617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 14585605 - 14585718
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  | ||||||||||||||||| |||||    
T  14585605 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcttgatttcgtcgtcttagcgcgacgttgtgttgttcgtcgtc 14585703  T
Q  280 ttgtacggcgttgtt 294  Q
    |||| ||||||||||    
T  14585704 ttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 285 - 402
Target Start/End: Original strand, 8981170 - 8981287
Alignment:
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 384  Q
    ||||||| ||||||||||||| |||||| ||||||  |||| || |||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||    
T  8981170 cggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttggacgtca 8981269  T
Q  385 atgttgtagatccggaag 402  Q
    | |||  |||||||||||    
T  8981270 acgttacagatccggaag 8981287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 402
Target Start/End: Complemental strand, 14916315 - 14916152
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||| ||||| ||||| ||||| | || | |||| ||||  |||||||||||  || |||||| ||||||  ||||||| |||||||||    
T  14916315 tgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaa 14916216  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    || || ||||||||||||| | |||||||  |||||||||||| | |||||| |||||||||||    
T  14916215 gaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaag 14916152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 23230550 - 23230777
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||||| |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| || | |||||||| |||||    
T  23230550 ctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtc 23230647  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||| | ||||||| ||| |||  ||||| ||||||  | ||| ||||| ||| ||||||   |||| ||||     
T  23230648 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgacttggg 23230744  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  23230745 cgtcaacgttgcagatccggaagcatgggtatt 23230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 7883423 - 7883196
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  |||||||||| |||  ||||| ||||||||||||| |||||    
T  7883423 ctttcaatctaaataagtggttttcacatctatcaagt-ttttcttttgtgttttttg-tgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtc 7883326  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||| ||| |||| | ||||||| ||  ||| |||||||||||||  | | ||||||| ||| ||||||   || |||||||    
T  7883325 ttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatcaattacaaattcaagcaataatttgga 7883229  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||  |||| ||||||||||| | |||||||    
T  7883228 cgtcagcgttgcagatccggaagcatgggtatt 7883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 378
Target Start/End: Original strand, 8826116 - 8826311
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||| |||||||||||||||||  | | ||||||||| ||||||||||| | ||||| ||||||||||||||| ||||  |||| |||||||| ||||||    
T  8826116 tttcgatctaaataagtgatttttacacatatcaagttttttcttttgttt-ttttcgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtct 8826214  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||  |||||||| ||| |||| || |||||| |||| || |||| || ||||||||| |||| ||||||| |||||   |||||||  |||||||||    
T  8826215 tgtgtggcgttgtgtgaattcgtgtcttgttgcggtg-ttctttgattcatattgaaatatcaacttcaatgaatcatcgattcaatcaatgatttgg 8826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 21237798 - 21237914
Alignment:
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    |||||||||||| ||||||| ||||||  |||||  ||||||| ||||||||||| ||| ||||||||||| ||||||||||  |||||||||||| |||    
T  21237798 ggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaa 21237897  T
Q  386 tgttgtagatccggaag 402  Q
    ||||| |||||| ||||    
T  21237898 tgttgcagatccagaag 21237914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 402
Target Start/End: Complemental strand, 45445994 - 45445776
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||| ||| |||||| ||| || | ||||||||| ||||||||| | | ||||  ||||||||||||||  || ||||||||| |||||| ||||||    
T  45445994 tttcaatttaattaagtggttttcacacatatcaagttttttcttttttttgtttttttgatttcgtcgtctaagtacgacgttgtattgttcgtcgtct 45445895  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||   |||||||||||| |||||| | ||||||| |||  ||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |    
T  45445894 tgtgcggc---gtttgatttcgcattttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggc 45445798  T
Q  381 gccaatgttgtagatccggaag 402  Q
    | ||| |||| | |||||||||    
T  45445797 gtcaacgttgaaaatccggaag 45445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 413
Target Start/End: Complemental strand, 471333 - 471120
Alignment:
Q  197 tgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttg 296  Q
    ||||||||  || |||||||| ||||||||| ||| |||||||||||| ||||||   ||||| || |||||||||| |||||| || || ||||   ||    
T  471333 tgatttcctcatgtatcaagttttttcttttatgttttttcatgattttgtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgcgacgtt---tg 471237  T
Q  297 atttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatc 396  Q
    |||| | || |||||| |||| |  |||||||  ||||||||||||| ||||| ||||||| | |||||||  ||||||||  || ||| |||| |||||    
T  471236 attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatc 471137  T
Q  397 cggaagtaggggtattc 413  Q
    |||||| | ||||||||    
T  471136 cggaagcatgggtattc 471120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 367
Target Start/End: Complemental strand, 20227483 - 20227281
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattt--tcatgatttcgtcgtctgtgtgcgacgt 263  Q
    |||||||||  || ||||||||||||||||||| |||||| ||||| |||   ||||| | ||| | |||  || ||||||| ||||||| ||||| |||    
T  20227483 tcttttttctctttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgt 20227384  T
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 363  Q
    ||| |||||| ||||||| | || |||||||||||||| | ||||||||| || ||| |||||||  |||| ||||||| |||| | ||||| ||| |||    
T  20227383 tgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaaagatcggcttaagtcaattacaaatt 20227285  T
Q  364 caat 367  Q
    ||||    
T  20227284 caat 20227281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 36532906 - 36532986
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||| ||||||||| ||| ||||||||||||| | ||||||| ||||||||||||||||  ||||||||||||    
T  36532906 gttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 401
Target Start/End: Original strand, 37971247 - 37971406
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  ||||| |||| |||||||| ||||||||| |||||||   ||||||||| |||| | ||||||||| ||  |||  ||||||||    
T  37971247 tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttttcgtggtgtttgttcagttcctattgaaa 37971343  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaa 401  Q
    ||||  | ||||||||| ||| ||||||   |||||||||||| ||| |||| ||||||||||    
T  37971344 gatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaa 37971406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 378
Target Start/End: Complemental strand, 27498553 - 27498354
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| |||||||| ||||||||||||||  | ||||||||||| ||| ||||| ||||||||  | ||||||||||||  ||| | | |||||||||||    
T  27498553 cattttctttcaatttaaataagtgatttttacatatatcaagtttttccttttatgtatttt-gtaatttcgtcgtctaagtgtgccattgtgttgttc 27498455  T
Q  274 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 373  Q
     |||||||||   |||   ||||||||||||| |||| |||||||| ||||  ||  ||||||||||||| ||||| | | | ||| |||||||| ||||    
T  27498454 gtcgtcttgt---gcgacatttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagttagt-acaaattcaattaatga 27498359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 341
Target Start/End: Complemental strand, 24419342 - 24419202
Alignment:
Q  200 tttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatt 299  Q
    |||||| ||||||||| | |||||||||||||  |||  | ||||| ||||||| ||||| ||||||||| ||| |||| ||||  | | ||||||||||    
T  24419342 tttccacatatatcaaattttttcttttgtgttgtttg-taatttcttcgtctgagtgcggcgttgtgtttttcgtcgtattgtgagacattgtttgatt 24419244  T
Q  300 tcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    ||| |||| |||||| |||| |||||||| ||||||||||||    
T  24419243 tcgtgtttggttgtgatgttcatttggttcatattgaaagat 24419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 28239846 - 28239923
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||| | ||| |||||| |||||| ||||| |||||||||||||||||    
T  28239846 tgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatca 28239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 412
Target Start/End: Original strand, 10377625 - 10377823
Alignment:
Q  210 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 309  Q
    |||||||| ||| | ||||||| ||||  ||||||||| ||||  ||||| |||||||||||||  |||||||| |||||||   |||||||||||||||    
T  10377625 tatcaagtttttccctttgtgttttttg-tgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtt---tgatttcgcgttttg 10377720  T
Q  310 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggt 409  Q
    | ||||||||| ||  |||  ||||||||||||  | ||| ||||| | | ||||||   |||||||||||  ||| |||| ||||||||||| | ||||    
T  10377721 tcgtggtgtttgttcagttcctattgaaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggt 10377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 20553429 - 20553206
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat----gatttcgtcgtctgtgtgcgacgttgtgttgttcat 275  Q
    ||||||||||||||||||||||| || || ||| |||| ||| ||||||||| ||||  |    |||||||||||||  ||||| |||| |||||||| |    
T  20553429 ctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtgtttttttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgt 20553330  T
Q  276 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||||| | ||||   ||||||||| | || |||| | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   ||||||    
T  20553329 cgtcttatgcggc---gtttgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatt 20553233  T
Q  376 tggacgccaatgttgtagatccggaag 402  Q
    |||||| ||| |||| |||||||||||    
T  20553232 tggacgtcaacgttgcagatccggaag 20553206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 40211488 - 40211267
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg--tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 277  Q
    ||||||||||||||||| | ||| || || |||||||| ||||||||||||  | ||||  ||||||||||||||   || | ||||||||||||| |||    
T  40211488 ctttcaatctaaataagcggttttcacatctatcaagtattttcttttgtgtttttttttgtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcg 40211389  T
Q  278 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    |||| |   ||  ||||||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||| || || ||| |||| |   ||||||||    
T  40211388 tcttat---gcagtgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaattccaccaatgatttg 40211292  T
Q  378 gacgccaatgttgtagatccggaag 402  Q
    | || ||| ||||||||||||||||    
T  40211291 ggcgtcaacgttgtagatccggaag 40211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 21237702 - 21237752
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 231  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  21237702 tttcaatctaaataagtgatttccaaatatatcaagtgttttcctttgtgt 21237752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 20559929 - 20559709
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||  | ||||  ||||||||||||||  ||||  |||| |||||||| ||||    
T  20559929 ctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgt 20559830  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| ||||    |||||||| | || |||  | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   |||||||||    
T  20559829 cttgtgcggc---ctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttgg 20559733  T
Q  379 acgccaatgttgtagatccggaag 402  Q
    ||| ||| |||| |||||||||||    
T  20559732 acgtcaacgttgcagatccggaag 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 20571491 - 20571271
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||||||| || || |||||||| ||| |||||||  | ||||  ||||||||||||||  ||||  |||| |||||||| ||||    
T  20571491 ctttcaatctaaataagtgattttcacatctatcaagtttttccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgt 20571392  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| ||||    |||||||| | || |||  | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   |||||||||    
T  20571391 cttgtgcggc---ctttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttgg 20571295  T
Q  379 acgccaatgttgtagatccggaag 402  Q
    ||| ||| |||| |||||||||||    
T  20571294 acgtcaacgttgcagatccggaag 20571271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 297
Target Start/End: Original strand, 34492973 - 34493084
Alignment:
Q  187 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc--gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    ||||||||||||||||| | || |||||||| |||||| |||| | |||||||||||||  |||||| | ||||||||||||||||||| | ||| |||     
T  34492973 tctaaataagtgatttctacat-tatcaagttttttctattgtattttttcatgatttctggtcgtcagagtgcgacgttgtgttgttcgttgtcatgtg 34493071  T
Q  285 cggcgttgtttga 297  Q
    ||| |||||||||    
T  34493072 cggtgttgtttga 34493084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 44100005 - 44099928
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||||| ||| || ||| |||||| ||||| || ||||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 40619253 - 40619154
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 282  Q
    |||||||||||||||||||| || ||||||||||| |||  |||||||| ||||  ||||||| ||||||  ||||| ||||||||||||  ||||||||    
T  40619253 tcaatctaaataagtgattttcacatatatcaagtttttctttttgtgt-tttttgtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttg 40619155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 16247348 - 16247178
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||| ||||||  ||||| |||||||||||||||||||||||   |||  |||||||||| ||| |||| | ||||||  ||| |||  ||| ||||    
T  16247348 tgatttcttcgtctaagtgcggcgttgtgttgttcatcgtcttgt---gcgacgtttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaa 16247252  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||||  | ||||| ||| ||| |||||||  ||||||||| |  |||||||| ||||||||||| | |||||||    
T  16247251 gatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatt 16247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 413
Target Start/End: Original strand, 42046265 - 42046356
Alignment:
Q  322 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||||| || |||||||| |||||| |||| | ||||||||    
T  42046265 tttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattc 42046356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 36948633 - 36948484
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 267  Q
    |||| |||||| ||||||||||||||||||| ||| |||||||||||| | ||| ||||||||| ||||  |  |||| ||||||  |||   |||||||    
T  36948633 ttttctcattttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtgttttttttttgtttcatcgtctaagtgttgcgttgtg 36948534  T
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||||  ||||| ||| ||||   |||||||||||||| |||| | |||||||    
T  36948533 ttgtttgtcgtcctgtgcggc---gtttgatttcgcgtcttgtcgcggtgttt 36948484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 14545085 - 14544868
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || |||||||||   ||| ||||  ||||||||  ||||||||||||||   |||| |||||| |||||  |||||    
T  14545085 ctttcaatctaaataagtggttttcacatatatcaaaattttccttt--tgtatttttgtgatttcgtcgtctaattgcggcgttgttttgttagtcgtc 14544988  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  |||   |||||||||| ||| |||| | |||||| |||| |||  ||||||||||||  | ||||||||| |||  || |||  || ||||||     
T  14544987 ttgtgtggc---gtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatcaatcaattacaagttaaatcaattatttggg 14544891  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  14544890 cgtcaacgttgcagatccggaag 14544868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 24186858 - 24186786
Alignment:
Q  166 tcttttttcat--ttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 236  Q
    |||||||||||  || |||| |||||||||||||||||| |||||||||||||| ||| ||||||||| ||||    
T  24186858 tcttttttcatcttttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtgtgtttt 24186786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 33342448 - 33342521
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||||| ||||||| | ||||||| ||||||||| ||| |||||| |||||||||||| || ||||||||    
T  33342448 tgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttgattcatattgaa 33342521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 43192417 - 43192341
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || |||||||||| ||||| || || ||||||||||    
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 19876224 - 19876295
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| ||||||||| ||||||||||||||| | ||| || |||||||||| ||||| || ||||||||    
T  19876224 tgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttgattcatattgaa 19876295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 43834183 - 43834063
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||||| |||| ||||||||||||  | |||||||| | ||||| | ||||| ||||||  ||||  |||||||||||||  |||    
T  43834183 ctttcaatctaaataagtgatatccacatatatcaagtg--tccttttgtgtttttttcgtaatttcatcgtctaagtgccgcgttgtgttgttccccgt 43834086  T
Q  279 cttgtacggcgttgtttgatttc 301  Q
    |||||  ||| || |||||||||    
T  43834085 cttgtgtggcattttttgatttc 43834063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 3673350 - 3673505
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||  || |||||   ||||||| ||||||| | ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  3673350 ctttcaatctaaataagtggttatcacatata---agtgtttccttttgt-tctttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 3673445  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    || |   ||| |||||||||||| || |||||| ||||||  ||| |||  ||||||||||||    
T  3673446 ttat---gcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatc 3673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 357
Target Start/End: Original strand, 34609794 - 34609911
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  ||||| ||||| ||||||| ||||||||| || |||| |||||||| | || |||||| ||||||  ||| |||   |||||||    
T  34609794 tgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgttt-gtttccattgaaa 34609892  T
Q  339 gatcagcttcaatcaatca 357  Q
    ||||| ||||| |||||||    
T  34609893 gatcaacttcagtcaatca 34609911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 39450552 - 39450630
Alignment:
Q  289 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    ||||||||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| | ||||| |||||||||||    
T  39450552 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaat 39450630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 2655883 - 2655959
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  2655883 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||||||||  || ||  || |||||| ||||| || |||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 25191170 - 25191079
Alignment:
Q  261 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaat 355  Q
    ||||||||||||| ||||||||| |||||||   ||||||||| |||||| | ||||||| |||  ||  ||||||||||||||| ||| |||||    
T  25191170 cgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaat 25191079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 26469320 - 26469232
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||| |||||||||||||||||| |  |||||||||| |||  || ||||||  |||||  |||||||  |||||||||||||    
T  26469320 gtgcgacgttatgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcctattgaaagatca 26469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 33298866 - 33298942
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 340  Q
    ||||||||||||||||||||  || ||||||||||||| ||| ||| || |||||| ||||| || |||| ||||||    
T  33298866 tgtgttgttcatcgtcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaaga 33298942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 5917761 - 5917714
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    |||| ||||||||||||||  ||||||||||||||||||| |||||||    
T  5917761 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 5917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || ||||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 27747186 - 27747107
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||| || |||||| || |  |||||||||||  ||||||||| |||||| ||||| || ||||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatca 27747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 8981126 - 8981176
Alignment:
Q  214 aagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||| ||||    
T  8981126 aagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtgcggcgtt 8981176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 18734026 - 18734107
Alignment:
Q  259 gacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||| ||||||||||  |||||||| ||||| ||||  ||||| | | ||||||||||||||||||| || ||||||||||||    
T  18734026 gacgatgtgttgttcgccgtcttgtgcggcgatgtta-atttctcttcttgttgtggtgtttatttgttttatattgaaagat 18734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 33214746 - 33214636
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 391  Q
    |||||||||||||| |||| ||||||||  ||| |||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |  ||| ||||     
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  392 agatccggaag 402  Q
    |||||||||||    
T  33214646 agatccggaag 33214636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 14585721 - 14585810
Alignment:
Q  322 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtat 411  Q
    |||||||  |||||||| ||||||||||  |||||||| |||||||   ||||||||||| ||| |||| |||||| |||| | ||||||    
T  14585721 tttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtat 14585810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 16794305 - 16794382
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| |  ||| |||||||||| ||| |||||  |||||| ||||| || ||||||||||||||    
T  16794305 tgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatca 16794382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 402
Target Start/End: Complemental strand, 17693739 - 17693579
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  |||||  ||||| |||||| || |||||| |||||||   |||||| ||||||||| | ||||||| ||| |||  |||| |||    
T  17693739 tgatttcgtcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgtttagttcctattaaaa 17693643  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||  | ||| ||||| ||| ||||||   ||||||||| || |||  ||| |||||||||||    
T  17693642 gatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaag 17693579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 26469379 - 26469338
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgtttt 222  Q
    |||||||||||||||||||||| || ||||||||||| ||||    
T  26469379 tttcaatctaaataagtgattttcacatatatcaagtttttt 26469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 39646291 - 39646227
Alignment:
Q  263 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggt 327  Q
    |||||||||||   ||||||| |||||||||||||||| ||  |||||||| |||||| ||||||    
T  39646291 ttgtgttgttcgcggtcttgtgcggcgttgtttgattttgcaatttgttgtagtgtttgtttggt 39646227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 167 - 402
Target Start/End: Original strand, 47132793 - 47133028
Alignment:
Q  167 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 266  Q
    |||||| | ||| |||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| ||||||||||||||| ||| | ||||||    
T  47132793 ctttttcccttttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtggggcgttgt 47132892  T
Q  267 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 366  Q
    ||||||| |||| |||| ||||||||||| ||||||||| |||||| ||||||  |||| || |||||||||||||||||||| ||||||||| ||||||    
T  47132893 gttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtcaatcacagattcaa 47132992  T
Q  367 ttgatgatttggacgccaatgttgtagatccggaag 402  Q
    | ||||||||||||| |||  ||| |||||||||||    
T  47132993 tcgatgatttggacgtcaacattgcagatccggaag 47133028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 183 - 377
Target Start/End: Original strand, 12635076 - 12635270
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| || ||| || ||| | |||||||||||| ||||||||||||| |||||||    
T  12635076 tcaatctaaataagtgattttcacatatatcaagtgttttcttttgtgtcttgttcgtgtttt-gacgtctgtgtgcggcgttgtgttgttcgtcgtctt 12635174  T
Q  282 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    || ||||||||||||||||  |||||||| |||||||| |||||||| |||||||||||||| ||| | | ||||||| |||||||  ||||||||    
T  12635175 gtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaatcacaaattcaatcaatgatttg 12635270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 180 - 395
Target Start/End: Original strand, 49626816 - 49627031
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||| ||||||||||||||||| || | |||||||| |||||||||||||| ||||   |||||||||||||| |||||||| ||||||||||| ||||    
T  49626816 ctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttgtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgt 49626915  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| ||||||||||||||||  | | |||||| |||| ||  |||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  49626916 cttgtgcggcgttgtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgg 49627014  T
Q  379 acgccaatgttgtagat 395  Q
    ||| ||| |||| ||||    
T  49627015 acgtcaacgttgcagat 49627031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 166 - 402
Target Start/End: Original strand, 44543163 - 44543397
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||||||  || ||||| ||||||||||||||||| || | ||||||||||||||||||||||| ||||  ||||||||||||||  ||||||| |||    
T  44543163 tcttttttccctttctttcgatctaaataagtgattttcacaaatatcaagtgttttcttttgtgttttttg-tgatttcgtcgtctaagtgcgactttg 44543261  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||| |||| || | |||||||||||||||| || | || ||| ||||||  || |||| |||||||||||||||||| | ||||||||| |||||    
T  44543262 tgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgtt-ggttcatattgaaagatcagctttagtcaatcacagattca 44543360  T
Q  366 attgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||  |||||||||||| ||| |||| |||||| ||||    
T  44543361 atcaatgatttggacgtcaacgttgcagatccagaag 44543397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 181 - 378
Target Start/End: Original strand, 16161739 - 16161939
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| ||||||    
T  16161739 tttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtct 16161837  T
Q  281 tgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    ||| ||||||||||||||||| |   |||||||||  ||||||  |||||||  ||||||||||||||||| |  |||||||| ||||| |  |||||||    
T  16161838 tgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttaagacaatcacaaattcattcaatgattt 16161937  T
Q  377 gg 378  Q
    ||    
T  16161938 gg 16161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 398
Target Start/End: Original strand, 1742187 - 1742402
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||| | ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  1742187 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 1742286  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   |||  |||||||||||||| |||| ||||||||  |||  ||  |||||||||||| || ||||||||| ||| ||||||   |||||||||     
T  1742287 ttgt---gcgacgtttgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatcaatcaattacaaattcaaccaatgatttggg 1742383  T
Q  380 cgccaatgttgtagatccg 398  Q
    || ||| |||| |||||||    
T  1742384 cgtcaacgttgaagatccg 1742402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 143 - 397
Target Start/End: Complemental strand, 36775938 - 36775682
Alignment:
Q  143 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 242  Q
    ||||||||||||||| || | || ||||||||  || |||||||||||||||| |||||| || ||| ||||||| |||||||| |||| ||||| ||||    
T  36775938 gatctagaatcacccctctgcat-cttttttccctttctttcaatctaaataaatgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 36775841  T
Q  243 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaa 338  Q
    ||| || | |  ||||||||||||||||||| ||||||||| | | |||||||||||||||   |||||||||  ||| ||  |||||||  ||||||||    
T  36775840 ttcttcattttagtgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgatttcgcatcttttgttgtgcggtattcgtttggttcgtattgaaa 36775741  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 397  Q
    |||| ||||||  |||||||| |||||||  ||||||||| || ||| |||| ||||||    
T  36775740 gatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 36775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 402
Target Start/End: Original strand, 24582913 - 24583075
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||| |||||||  ||| ||| ||||||||||||||| ||||| |||||||||||||||| || | |||||| ||||||  || |||| |||||||||    
T  24582913 tgattttgtcgtctaagtgtgaccttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaa 24583011  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||||||| ||||||||| |||||||  |||||||||||| ||| |||| |||||| ||||    
T  24583012 gatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaag 24583075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 359
Target Start/End: Complemental strand, 40163685 - 40163507
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| || ||||||||||||||||| ||||||||| | |||| | | |||| ||||||||||||||||||||  ||| ||||||||||| ||| |||||    
T  40163685 ctttctatataaataagtgatttccacatatatcaaattttttatct-gtgttttttcatgatttcgtcgtctcagtgtgacgttgtgttcttcgtcgtc 40163587  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcaca 359  Q
    |||| |  | || |||||||  ||||||||||| ||||||| |||||||  ||||| ||||||||||||| |||||||||    
T  40163586 ttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaatcaca 40163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 390
Target Start/End: Original strand, 41994337 - 41994540
Alignment:
Q  189 taaataagtgatttc-catatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacg 286  Q
    ||||||||||||||  || ||||||||||| ||||||| ||| | ||||   |||||||  ||||||  |||| ||||||||||||||||||||||| |     
T  41994337 taaataagtgatttttcacatatatcaagttttttcttgtgttttttttttgtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgca 41994436  T
Q  287 gcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaat 386  Q
    ||||||||||||||||  | |||||||||||||  ||| ||| ||||||||||||||| |||| ||||||| ||||| |||  |||||||||||| |||     
T  41994437 gcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaatcaaatatttaatcaatgatttggacgtcaac 41994536  T
Q  387 gttg 390  Q
    ||||    
T  41994537 gttg 41994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 21947803 - 21947585
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||  || |||||||||| |||||    
T  21947803 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttttg-tgatttcgtcgtctaagtgcagcgctgtgttgttcgtcgtc 21947705  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    | | ||||||||   ||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  21947704 tcggacggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 21947608  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  21947607 cgtcaacgttgcagatccggaag 21947585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 402
Target Start/End: Original strand, 16262768 - 16262986
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||||||| || ||||| |   | |||| |||||||| ||||  |||||| |||||||| ||| | || || ||||||  | || |    
T  16262768 tttcaatctaaataagtgattttcagatataac---tttttttttttgtgtttttttgtgattttgtcgtctgagtgtggcgatgcgttgttggttgttt 16262864  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||| |||| || || |||||||||||||||||  ||||||||  |    
T  16262865 tgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgc 16262964  T
Q  381 gccaatgttgtagatccggaag 402  Q
      ||| |||| |||||||||||    
T  16262965 atcaacgttgcagatccggaag 16262986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 7337848 - 7337620
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  7337848 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtc 7337750  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   ||   |||||||||||||| |||| | ||||||| ||  ||| |||||||||||||  | ||||||||| ||| ||||||   |||||||| |    
T  7337749 ttgt---gcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctacatcaatcaattacaaattcaagcaatgatttgca 7337653  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  7337652 cgtcaacgttgcagatccggaagcatgggtatt 7337620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 32679285 - 32679159
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttg-tgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||||||| ||||||||||||||||| ||||||||| |||||| ||||| | | ||||| ||||||| ||||||| ||||| ||||||||||||| || |    
T  32679285 ctttcaatttaaataagtgatttccacatatatcaattgttttattttggttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcat 32679186  T
Q  279 cttgtacggcgttgtttgatttcgcgt 305  Q
    ||||| |||||| ||||||||||||||    
T  32679185 cttgtgcggcgtagtttgatttcgcgt 32679159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 381
Target Start/End: Original strand, 9341630 - 9341830
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| ||||||||  |||| || ||||||||||||||||||||||||| ||| | ||||||||||||||| |||    ||| |||||||| |||||    
T  9341630 ctttcaatataaataagaaattttcacatatatcaagtgttttcttttgtgtttttacgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtc 9341729  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| | |||||||||||||  | || |||||| ||||||| |||| || ||||| ||  ||||  ||||||||||||||||||| ||  ||| ||||||    
T  9341730 ttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatattaaactatca-attcaatcaatcacatattccatcaatgttttgga 9341828  T
Q  380 cg 381  Q
    ||    
T  9341829 cg 9341830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 166 - 357
Target Start/End: Original strand, 15492184 - 15492379
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc-----atgatttcgtcgtctgtgtgcga 260  Q
    ||||||| |||||| ||||||||||||||| |||||| || ||||||||||| ||||||||||||| |||||      ||||||| ||||||| ||||||    
T  15492184 tctttttccatttc-tttcaatctaaataaatgattttcacatatatcaagttttttcttttgtgttttttctttgtgtgatttcatcgtctgagtgcga 15492282  T
Q  261 cgttgtgttgttcatcgtcttg-tacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 357  Q
    ||||||||||||| |  | ||| | |  | |||||||||||||||| |||||| || |||| ||||||| ||||||||| |||| |||||||||||||    
T  15492283 cgttgtgttgttcgttattttgatgcaacattgtttgatttcgcgtcttgttggggagtttgtttggttcatattgaaa-atcaacttcaatcaatca 15492379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 402
Target Start/End: Original strand, 19060772 - 19061034
Alignment:
Q  144 atctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat---- 239  Q
    ||||| ||||||||||| | ||  |||||||  || ||||| || |||||||| ||||| || | |||||||| |||||||||| ||| ||||  |        
T  19060772 atctaaaatcacccatctgcatctttttttccctttctttcgatttaaataagcgattttcacaaatatcaagcgttttcttttatgttttttttttttg 19060871  T
Q  240 -gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
     |||||||||||||  ||||||| ||||||||||| |||||||||  |||||||||||||||  | | ||||||  ||| ||  |||||| |||||||||    
T  19060872 tgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtg-ttcgttggttcatattgaaa 19060970  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||| ||||||| |||||||||  ||||||  || ||||||||  ||||||||||||||| ||||    
T  19060971 gattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaag 19061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 413
Target Start/End: Complemental strand, 34413276 - 34413048
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||       ||||||| |||| ||||| |||||| |||||||  ||||||| ||||||||||| |||||    
T  34413276 ctttcaatctaaataagtgattttcacatacat-------tttctttcgtgttttttcgtgattttgtcgtcttagtgcgacattgtgttgttcgtcgtc 34413184  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| |||||||||||||||||||   |||||||||  ||||||  |||| ||  |||||||||||||||| ||  |||||||| |||||||  || |      
T  34413183 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcacaaattcaatcaataa-- 34413086  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||||| ||| ||||||||||| |||| | ||||||||    
T  34413085 tggacgtcaacgttgtagatccagaagcatgggtattc 34413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 23291828 - 23291609
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  || || |||||||||||||||  ||    
T  23291828 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcattatc 23291729  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   |||  |||||||||||| | |||| | ||||||  |||  ||  |||||||||||| || ||| ||||| ||| ||||||   |||||||||     
T  23291728 ttgt---gcgacgtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttggg 23291632  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    |  ||| |||| |||||||||||    
T  23291631 catcaacgttgaagatccggaag 23291609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 412
Target Start/End: Complemental strand, 8212107 - 8211868
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 267  Q
    ||||||| ||| |||| |||||||||||||| ||| || ||||||||||| ||  ||||||||| ||||  ||||||||||||||   |||| |||||||    
T  8212107 ttttttccttttctttaaatctaaataagtggttttcacatatatcaagttttcccttttgtgttttttg-tgatttcgtcgtctaaatgcggcgttgtg 8212009  T
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    |||||||||||||||| ||||   |||||||| | ||| |||| | | |||| |||| |||| ||||||||||||  | ||| ||||  ||| ||||||     
T  8212008 ttgttcatcgtcttgtgcggc---gtttgattccacgtcttgtcgcgatgttcatttagttactattgaaagatctacatcagtcaaatacaaattcaac 8211912  T
Q  368 tgatgatttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
      ||||| ||| || |||||||| ||||||||||| | |||||||    
T  8211911 caatgatctgg-cgtcaatgttgcagatccggaagcatgggtatt 8211868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 376
Target Start/End: Original strand, 34528695 - 34528829
Alignment:
Q  242 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||| ||||||  ||||| | ||||||||||| ||||||||  ||| ||||||||||||||| | |||||  ||||||| ||||||| ||||||||||||    
T  34528695 tttcatcgtctaagtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagat 34528794  T
Q  342 cagcttcaatcaatcacatattcaattgatgattt 376  Q
    || ||||| ||||||||| |||||||  |||||||    
T  34528795 caacttcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 45415466 - 45415683
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||||| |||||||  |||| ||||  ||||||||||||||  ||||| |||| |||||||| |||||    
T  45415466 ctttcaatttaaataagtggttttcacatctatcaagttttttctt--gtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 45415563  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   || | |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| | ||||   ||||||||||    
T  45415564 ttgt---gcatcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaactcaagcaatgatttgga 45415660  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  45415661 cgtcaacgttgcagatccggaag 45415683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 396
Target Start/End: Complemental strand, 13144997 - 13144785
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| |||||||||||| | ||| ||||||||| ||||  ||||||||||||||   |||| |||||||||||   | |||    
T  13144997 ctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgt-tttttttgatttcgtcgtctaaatgcggcgttgtgttgtctgttgtc 13144899  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   ||    ||||||||||||| |||| || ||||| ||||| || ||||||||||| |  ||| ||||||| ||| |||||||  ||||||||||    
T  13144898 ttgt---gcaacatttgatttcgcgtcttgtcgtagtgttcatttgattcatattgaaagaccgactttaatcaattacaaattcaatcaatgatttgga 13144802  T
Q  380 cgccaatgttgtagatc 396  Q
    || |||| ||| |||||    
T  13144801 cgtcaattttgcagatc 13144785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 35484576 - 35484348
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| |||||  |||||| ||||  || |||||||||||  ||||| ||||||||||||| |||||    
T  35484576 ctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgttttttg-tggtttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 35484478  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   ||||  |||| |||||||| |||| | ||||||| ||   ||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  35484477 ttgt---gcgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 35484381  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||| ||| | |||||||    
T  35484380 cgtcaacgttgcagatccgaaagcatgggtatt 35484348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 397
Target Start/End: Original strand, 48750138 - 48750305
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggtta 329  Q
    |||| ||||||||  ||||  ||||||||||||||||||| ||||||||| || ||||||||||||||||   |||||||||  ||||||  |||| ||     
T  48750138 tttcgtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattc 48750237  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 397  Q
     |||||||||||||||||||  |||||||| ||| |||  ||||||||| || ||| |||| ||||||    
T  48750238 gtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatcc 48750305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 5983744 - 5983971
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| |||||||||| || ||| || || |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| |||| |||||||| |||||    
T  5983744 ctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 5983841  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||| || |||| | ||||||| ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  5983842 ttgtgcggc---gtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggg 5983938  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| | || ||||||||||| | |||||||    
T  5983939 cgtcaacgctgcagatccggaagcatgggtatt 5983971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 379
Target Start/End: Complemental strand, 6218007 - 6217817
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    |||||| || |||||||||| | ||||||| | ||||||| |||   ||||| ||||||||||||| | | | | | |||| || ||| | ||||||| |    
T  6218007 atctaattacgtgatttccacacatatcaaattttttcttgtgt---ttttcttgatttcgtcgtcggcgcgtggcattgtattattcgttgtcttgtgc 6217911  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    | ||||||||||||| |||| ||||| || ||||  ||||||  |||||||||||||| ||||| ||||||||| |||||||  ||||||||||    
T  6217910 gacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaatgatttgga 6217817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 13075821 - 13075703
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||  ||||||| | |||| ||||||||||||| ||||| ||||||| ||||||| |||||   || |||||||| | |||    
T  13075821 ctttcaatctaaataagtgattcacatatatct-aagtattttcttttgtgttttttcgtgatttcatcgtctgagtgcgtatttatgttgttcgttgtc 13075723  T
Q  280 ttgtacggcgttgtttgatt 299  Q
    |||| | |||||||||||||    
T  13075722 ttgtgcagcgttgtttgatt 13075703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 404
Target Start/End: Complemental strand, 31692602 - 31692432
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 332  Q
    ||||| |||||| |||||||| ||| ||| ||| ||||||  ||||||||| ||| |||||||||||| || | |||||| |||| ||  |||||| |||    
T  31692602 ttttcgtgattttgtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtg-ttcgttggttcata 31692504  T
Q  333 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagta 404  Q
    ||||||||| ||||| | ||||| ||| ||| |||  ||||||| || | |||||||||||||||| |||||    
T  31692503 ttgaaagattagctttagtcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaagta 31692432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 1602022 - 1602106
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 266  Q
    ||||| ||||||||||||| |||| ||||||||||||| || ||||| |||| |||||||||||||||||||| | |||||||||||    
T  1602022 ctttcgatctaaataagtggtttctatatatatcaagt-ttatctttcgtgtcttttcatgatttcgtcgtct-tctgcgacgttgt 1602106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 14872547 - 14872774
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| |||  | | ||||||||| ||| | ||||||| ||||  |||||| ||||||   ||||| | ||||||||||| |||||    
T  14872547 ctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtgttttttg-tgattttgtcgtccaagtgcggcattgtgttgttcgtcgtc 14872645  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   ||||||||||| |||| | |||||| |||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  14872646 ttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggg 14872741  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  14872742 cgtcaacgttgcagatccggaagcatgggtatt 14872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| |||||||||  |||||||||||||||| ||| |||||| |||||| ||||| || |||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 44915655 - 44915764
Alignment:
Q  293 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 392  Q
    |||||||| ||||||||| | ||||||  ||| ||| |||||||||||||| | ||| ||||| ||| |||||||  ||||||||| || |||||||| |    
T  44915655 tttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgca 44915754  T
Q  393 gatccggaag 402  Q
    ||||||||||    
T  44915755 gatccggaag 44915764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 34519142 - 34519218
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||| |||| ||||||||||||||||| ||| || |||||||||| ||||| || |||||||||||||    
T  34519142 tgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatc 34519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 37720306 - 37720243
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgattt 244  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||||    
T  37720306 ctttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgattt 37720243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 402
Target Start/End: Complemental strand, 34878383 - 34878245
Alignment:
Q  261 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 360  Q
    ||||||||||||| ||||||||| |||   |||||||||||||||||||| | ||||||| ||   ||  |||||||||||| || ||| ||||| |||     
T  34878383 cgttgtgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtcaattacaa 34878287  T
Q  361 attcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||   ||||||||| || ||| |||| |||||||||||    
T  34878286 attcaaccaatgatttgggcgtcaacgttgaagatccggaag 34878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 35462222 - 35462120
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||||||||| |  ||||| ||||||||||||| |||||    
T  35462222 ctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtgtaagtgcggcgttgtgttgttcgtcgtc 35462124  T
Q  280 ttgt 283  Q
    ||||    
T  35462123 ttgt 35462120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 32394905 - 32395133
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||| |||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||    ||||| |||||||||| ||||||||    
T  32394905 ctttcaatctaaatgagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtc 32395003  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   ||   |||||||||| |||||| | | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  32395004 ttgt---gcaacgtttgatttcccgttttatcgcggtgtttgttcagttcctattgaaagatctacatcattcaattacaaattcaaccaatgatttgga 32395100  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| |||| || ||| | |||||||    
T  32395101 cgtcaacgttgcagattcgaaagcatgggtatt 32395133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 402
Target Start/End: Original strand, 43412285 - 43412499
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg 287  Q
    |||||||||||||| ||| ||||||||  |  ||||||||||| |||| | |||||| |||||||| |||    | |||||||||||||||||| | ||     
T  43412285 taaataagtgattttcatttatatcaaaagaattcttttgtgtttttttcgtgattttgtcgtctgagtgatgtgctgtgttgttcatcgtcttttgcga 43412384  T
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatg 387  Q
    |||| ||||| |||| || |  |||  |||||| |||| || ||||||||| |||   ||||||||||| ||||||||||  |||||||| | | ||| |    
T  43412385 cgttatttgagttcgtgtctaattgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacg 43412484  T
Q  388 ttgtagatccggaag 402  Q
    ||| |||||| ||||    
T  43412485 ttgcagatccagaag 43412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 15435058 - 15434950
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||| ||||||| ||| |||||||   ||||  ||||||||||||||  ||||| |||| |||||||| | |||    
T  15435058 ctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt---ttttagtgatttcgtcgtctaagtgcggcgttctgttgttcgttgtc 15434962  T
Q  280 ttgtacggcgtt 291  Q
    |||| |||||||    
T  15434961 ttgtgcggcgtt 15434950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 15836102 - 15836201
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 282  Q
    ||||| |||||||||| ||| || ||| |||||||||||  |||||||| ||||| |||||| |||||||  ||| ||| ||||||||||| ||||||||    
T  15836102 tcaatttaaataagtggttttcacatacatcaagtgtttcgttttgtgt-ttttcgtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtcttg 15836200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 395
Target Start/End: Complemental strand, 30506376 - 30506146
Alignment:
Q  165 ttcttttttcatttcctttcaat-ctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgt 263  Q
    ||||||||||  || |||||||| ||||||| ||||||| || ||||||||||| ||||| | ||| | || || | ||||| ||||||| ||| ||| |    
T  30506376 ttcttttttctctttctttcaattctaaataggtgattttcacatatatcaagttttttcctatgttttttctcgtaatttcatcgtctgagtgtgactt 30506277  T
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 363  Q
    |||||||||  |||||||||    | ||| ||||||| ||| |  |||| ||||||  |||| ||  |||||||||||| |||| |||||||  || |||    
T  30506276 tgtgttgttagtcgtcttgtgtaacattgattgattttgcg-tccgttgcggtgttcgtttgcttcctattgaaagatcggcttgaatcaattgcagatt 30506178  T
Q  364 caattgatgatttggacgccaatgttgtagat 395  Q
    ||||  ||||| | ||||||||||||| ||||    
T  30506177 caatcaatgatgtagacgccaatgttgcagat 30506146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 5855879 - 5855989
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 332  Q
    |||| ||||||| |||||||  || ||||||||||||| |  || |||||| || | |||||||||||  ||| |||||||||||||||||| |||  ||    
T  5855879 ttttaatgattttgtcgtctaagtacgacgttgtgttgcttgtcatcttgtgcgacattgtttgattttacgtcttgttgtggtgtttattttgttttta 5855978  T
Q  333 ttgaaagatca 343  Q
    || ||||||||    
T  5855979 ttaaaagatca 5855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 31918899 - 31918966
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 252  Q
    |||||||||||||||| ||| || ||||||||||| ||||||||  ||||||||  ||||||||||||||    
T  31918899 tcaatctaaataagtggttttcacatatatcaagttttttcttt--tgtatttttgtgatttcgtcgtct 31918966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||| ||||||||| ||||||||||||||||  ||| ||| || |||||| ||||| || |||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 11462632 - 11462475
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||  || || || |||||||| ||||||||||||  ||||  |||||||||| |||  || || | || |||||||| |||||    
T  11462632 ctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcatctaagtccggcattttgttgttcgtcgtc 11462535  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||   |||||||||| ||| |||| | ||||||| ||| |||  ||||| ||||||    
T  11462534 ttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgtttagttcctattggaagatc 11462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 5701269 - 5701341
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  5701269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 5701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 9687275 - 9687199
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| || |||||| ||||||||||||||||| | | || ||| |||||| ||||| || |||||||||||||    
T  9687275 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatc 9687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 9919399 - 9919475
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||||||||||||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9919399 tgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9919475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 19715966 - 19715890
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  19715966 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 19715890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 28035149 - 28035225
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  |  |||||| ||||| || |||||||||||||    
T  28035149 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatc 28035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 45789558 - 45789666
Alignment:
Q  294 ttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtag 393  Q
    |||||||  ||| |||||| | ||||| |||||||  |||||||| |||| ||| ||||||| ||| |||||||  ||||||||| || | | |||||||    
T  45789558 ttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtag 45789657  T
Q  394 atccggaag 402  Q
    |||||||||    
T  45789658 atccggaag 45789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 21686838 - 21686916
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    ||||||||||||||  || || ||||||||||||| ||||||||| ||||   ||||||||| ||||||||| | |||||||    
T  21686838 tgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcggtgttt 21686916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 378
Target Start/End: Complemental strand, 27580310 - 27580119
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    ||||||||| ||||||| ||| || ||||||||||| ||| ||||  ||||||||  |||||||||||| |   |||| ||||||||||||| |||| |     
T  27580310 ttcaatctatataagtggttttcacatatatcaagtttttccttt--tgtatttttgtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgtatc 27580213  T
Q  282 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||  |||    |||||||| |||| |||| | |||||| |||| |||  ||||||||||||  ||||| | ||| ||| |||||||  |||||||||    
T  27580212 gtgtggc---atttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaattcaataaatgatttgg 27580119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 29738821 - 29738770
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 231  Q
    ||||||||||||||||||| ||| || || |||||||| |||||||||||||    
T  29738821 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt 29738770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 37720234 - 37720121
Alignment:
Q  288 cgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 383  Q
    |||||||||||||||| |  |||||||||  |||||  |||||||  ||||||||||||| |||||  |||||||| ||||| || ||||||||| || |    
T  37720234 cgttgtttgatttcgcatcttttgttgtgtggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtc 37720135  T
Q  384 aatgttgtagatcc 397  Q
    || |||| ||||||    
T  37720134 aacgttgcagatcc 37720121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 44637429 - 44637508
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||| | ||||||| || ||||||||| |||| ||| |||||  |||||| ||||| || ||||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 10776648 - 10776536
Alignment:
Q  175 atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttca 274  Q
    |||| ||||||||||||||||||| |||  | |||||   ||||||| ||||||||  ||||  |||||| |||||||  ||||| |||||||||||||     
T  10776648 attttctttcaatctaaataagtggtttttacatata---agtgtttccttttgtgctttttg-tgatttagtcgtctaagtgcggcgttgtgttgttcg 10776553  T
Q  275 tcgtcttgtacggcgtt 291  Q
    ||||||| | |||||||    
T  10776552 tcgtcttatgcggcgtt 10776536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 18569383 - 18569305
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| || |||||| ||| |||||| |||||| ||| |||||| |||||| ||||  || |||||||||||||    
T  18569383 tgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaaagatc 18569305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 27469722 - 27469680
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    ||||||||||||||  |||||||||||| ||||||||||||||    
T  27469722 tgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctt 27469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 31984087 - 31984176
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 272  Q
    ||||| ||||||||||||| ||| || ||||||||||| ||| ||| |||   ||||  ||||||||||||||  ||||| ||||||||||||    
T  31984087 ctttcgatctaaataagtggttttcacatatatcaagtttttccttgtgt---tttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 32679380 - 32679334
Alignment:
Q  84 tctctaagttttctttctctttcagtcgttgaggaggggcagtttta 130  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||    
T  32679380 tctctaagttttctttctctttcactcgtcgaggaggggtggtttta 32679334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 40163506 - 40163444
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 354  Q
    |||||||||||| | || ||||||||||| |||||||  ||||| ||||||||||||| ||||    
T  40163506 gtttgatttcgcctcttattgtggtgtttgtttggtttctattgcaagatcagcttcagtcaa 40163444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 18939336 - 18939444
Alignment:
Q  293 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 392  Q
    ||||||||| |||  ||||| |||||| ||||||||  ||||||||||||| ||||| ||||| ||| ||| |||  |||||||||||| | | |||| |    
T  18939336 tttgatttcacgtcctgttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgca 18939434  T
Q  393 gatccggaag 402  Q
    |||| |||||    
T  18939435 gatctggaag 18939444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 39888099 - 39888199
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| ||||| |||||||| ||| || ||||||| ||| ||||||||| ||| ||||  | ||||||||||||  ||||| ||||||| ||||| |||||    
T  39888099 ctttaaatcttaataagtggttttcacatatatctagttttttcttttatgttttttgtt-atttcgtcgtctaagtgcggcgttgtggtgttcttcgtc 39888197  T
Q  280 tt 281  Q
    ||    
T  39888198 tt 39888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 7997799 - 7997871
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  ||  ||||| ||||| || |||||||||    
T  7997799 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaa 7997871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 9172500 - 9172576
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9172500 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 9180482 - 9180558
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  9180482 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 9180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 24597332 - 24597280
Alignment:
Q  361 attcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||||||  |||||||||||| ||| |||||||||||||||| | ||||||||    
T  24597332 attcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtattc 24597280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 31836817 - 31836889
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  31836817 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 31836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 40646700 - 40646756
Alignment:
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||||||| ||| ||  || |||||||||||| || |||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatc 40646756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 40881083 - 40881015
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 334  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||    
T  40881083 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt 40881015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 50272211 - 50272139
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| |||| |||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  50272211 tgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 50272139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 51868716 - 51868640
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatc 51868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 180 - 401
Target Start/End: Complemental strand, 41553623 - 41553402
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41553623 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41553524  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||  |||| ||||||||||||||| || ||||||||||    
T  41553523 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttgga 41553424  T
Q  380 cgccaatgttgtagatccggaa 401  Q
    || ||| |||| ||||||||||    
T  41553423 cgtcaacgttgcagatccggaa 41553402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 180 - 399
Target Start/End: Complemental strand, 41553968 - 41553749
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41553968 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41553869  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||  |||| ||||||||||||||| || ||||||||||    
T  41553868 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttgga 41553769  T
Q  380 cgccaatgttgtagatccgg 399  Q
    || ||| |||| ||||||||    
T  41553768 cgtcaacgttgcagatccgg 41553749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 180 - 399
Target Start/End: Complemental strand, 41554313 - 41554094
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||| |||||    
T  41554313 ctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtc 41554214  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  | |||| ||||||||||||| ||||| |||||||  ||||||| ||||||||| ||||  |||| ||||||||||||||| || ||||||||||    
T  41554213 ttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcacatattcagttaatgatttgga 41554114  T
Q  380 cgccaatgttgtagatccgg 399  Q
    || ||| |||| | ||||||    
T  41554113 cgtcaacgttgcatatccgg 41554094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 180 - 413
Target Start/End: Original strand, 28476126 - 28476362
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  28476126 ctttcaatctaaataagtgattttcacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 28476224  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| |||||||||||||||||||   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| ||||| |  ||||||    
T  28476225 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatt 28476324  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    ||| || ||| |||| |||||| |||||| ||||||||    
T  28476325 tgggcgtcaacgttgcagatccagaagtatgggtattc 28476362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 146 - 413
Target Start/End: Complemental strand, 24351063 - 24350795
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 245  Q
    |||||||||||| |  | || ||||||||  || ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||  |||||||    
T  24351063 ctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttagtgatttc 24350965  T
Q  246 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggttaatattgaaagat 341  Q
    |||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |   ||||||||||  |||||  |||||||  |||||||||||    
T  24350964 gtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtattgaaagat 24350865  T
Q  342 cagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    ||||||||  |||||||| |||||||  ||||||||| || ||| |||| |||||| |||| | ||||||||    
T  24350864 cagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattc 24350795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 187 - 402
Target Start/End: Complemental strand, 38880761 - 38880545
Alignment:
Q  187 tctaaataagtgatttccatatatatcaagtgttttc-ttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    ||||||||||||| || ||  |||||||||| ||||| |||||||| || || |||||||||||| || ||||||||||||||||||   ||||||||||    
T  38880761 tctaaataagtgaatttcaggtatatcaagttttttccttttgtgttttctcgtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtac 38880662  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    | || |||||||||| || | |||||| ||||||  |||||||  ||||||||||||||||||| ||||||||| |||||||  |||||||||  |||||    
T  38880661 gacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaa 38880562  T
Q  386 tgttgtagatccggaag 402  Q
     |||| ||||| |||||    
T  38880561 cgttgcagatctggaag 38880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 24069584 - 24069361
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||| ||||| |||||||||||||| |  ||| |||| ||||||||||||| |||| | ||||||| ||||||| ||||| ||||||||||||| | ||    
T  24069584 ctttcgatctatataagtgatttccacacgtataaagttttttcttttgtgtctttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgt 24069485  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| ||||||| |||||||| |||| |||||| ||||||  |||| || ||||||||| ||||||||| ||||||||||  ||||||  ||||||||     
T  24069484 cttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttga 24069385  T
Q  379 acgccaatgttgtagatccggaag 402  Q
    ||| ||| |||| ||| |||||||    
T  24069384 acgtcaacgttgcagacccggaag 24069361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 81 - 402
Target Start/End: Original strand, 22742745 - 22743068
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 180  Q
    |||||||||||||||||| |||||||| || | |||||||||   |||||| |||        |||||||||||||| || | ||  ||||| |  || |    
T  22742745 ttctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaattttta-atctagaatcacccctctgcatcttttttcccctttc 22742843  T
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| || | ||||| ||||||||||||||  || |||||||||||||||| ||||||    
T  22742844 tttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtct 22742942  T
Q  281 tgtacggcgttgtttgatttcgcgtttt--gttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    ||| ||||||||||||||||| | ||||  |||||  || |||  |||||||  |||||||||||||||||||  |||||||| |||||||  |||||||    
T  22742943 tgtgcggcgttgtttgatttcacatttttagttgtgcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgattt 22743042  T
Q  377 ggacgccaatgttgtagatccggaag 402  Q
    |  || ||| |||| |||||| ||||    
T  22743043 gagcgtcaacgttgcagatccagaag 22743068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 9450322 - 9450094
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || || |||| ||| | | ||||||||| ||||  ||||||||||||||  ||| | ||||||||||||| |||||    
T  9450322 ctttcaatctaaataagtgattttcacatctatctagtttctccttttgtgttttttg-tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtc 9450224  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   ||||||||| |||||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  9450223 ttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 9450127  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  9450126 cgtcaacgttgcagatccggaagcatgggtatt 9450094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 30757004 - 30756786
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || || ||||| || ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  30757004 ctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 30756906  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   || |||||||    
T  30756905 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctacatcagtcaattacaaattcaaccaataatttgga 30756809  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    |  ||| |||| |||||||||||    
T  30756808 catcaacgttgcagatccggaag 30756786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 402
Target Start/End: Complemental strand, 3224575 - 3224378
Alignment:
Q  209 atatcaagtgttttcttttgtgtatt-----ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc 303  Q
    |||||||||||||| |||||||| ||     ||||||||||||||||||| | ||   |||||||||||| | ||||||| || | || ||||||||| |    
T  3224575 atatcaagtgttttgttttgtgtttttcttcttcatgatttcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcac 3224476  T
Q  304 gttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||||| | ||||  ||||||| |||||||| ||||| ||||| ||||||||  |||||||| ||||||| |||| ||| ||||||||||||||||    
T  3224475 gttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggattcaattaatgattttgacgtcaa-gttgtagatccggaag 3224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 398
Target Start/End: Original strand, 3394377 - 3394596
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||||||| ||  ||||| |||| ||||||| ||| | | ||| ||||||| ||||||| |||||  |||||||||||| |||||    
T  3394377 ctttcgatctaaataagtgattttcacgtatatgaagttttttcttgtgttt-tcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtc 3394475  T
Q  280 ttgtacggcgttgtttgatttcgcgttt--tgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    ||||  || |||||||||||||| || |  | ||| ||||||| ||| | | |||||||| ||||| ||||| |||||||||||||||||  |||||||     
T  3394476 ttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtcaatcacatattcaatcaatgatttc 3394575  T
Q  378 gacgccaatgttgtagatccg 398  Q
     ||| | ||||||||||||||    
T  3394576 tacgtcgatgttgtagatccg 3394596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 37837644 - 37837425
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || |||||| |||| ||||||||||||| ||||  ||||||| || |||  ||||| ||||||||||||| |||||    
T  37837644 ctttcaatctaaataagtggtttacacatatattaagttttttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtc 37837545  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||| |||| |||| | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||     
T  37837544 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggg 37837448  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  37837447 cgtcaacgttgcagatccggaag 37837425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 412
Target Start/End: Original strand, 42978518 - 42978744
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 282  Q
    |||||||||||||||| ||| || |||||| |||| ||| |||||||||  |||  ||||||||||||||  ||||| ||||||||||||| ||||||||    
T  42978518 tcaatctaaataagtggttttcacatatataaagtttttccttttgtgttcttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttg 42978617  T
Q  283 tacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgc 382  Q
    | ||||   |||||||||| |||||| | | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||| ||     
T  42978618 tgcggc---gtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacatcagtcaataacaaattcaaccaatgatttgggcgt 42978714  T
Q  383 caatgttgtagatccggaagtaggggtatt 412  Q
    ||| |||| ||||||||||| | |||||||    
T  42978715 caacgttgcagatccggaaggatgggtatt 42978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 398
Target Start/End: Original strand, 11343703 - 11343930
Alignment:
Q  180 ctttcaatctaaataagtgatttccat-atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcat--- 275  Q
    |||||||||||||||||||||||  |  || |||||| | ||||||||||||| ||||| ||||||||| ||||| ||||| ||||||||||||| |       
T  11343703 ctttcaatctaaataagtgatttttaacatctatcaaatattttcttttgtgttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcga 11343802  T
Q  276 -----cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattga 370  Q
         |||||||| ||  |||||| ||  |||||| |||||| ||||||| ||||||| |||||||||||| |  |||| ||||| ||| ||| |||| |    
T  11343803 atcgccgtcttgttcgatgttgttcgagctcgcgtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaa 11343902  T
Q  371 tgatttggacgccaatgttgtagatccg 398  Q
    ||||||||||| ||| |||| |||||||    
T  11343903 tgatttggacgtcaacgttgcagatccg 11343930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 34899792 - 34899564
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  34899792 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 34899694  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||| |||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  34899693 ttgtgcggc---gtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 34899597  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| | || |||||| | |||||||    
T  34899596 cgtcaacgttgcaaattcggaagcatgggtatt 34899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 48316997 - 48316769
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||| | ||||||||||||| ||||  ||||||||||||||  || || ||||||||||||| |||||    
T  48316997 ctttcaatttaaataagtggttttcacatctatcaaattttttcttttgtgttttttg-tgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtc 48316899  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| | |||||   ||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  48316898 ttgtgcagcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 48316802  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| | || ||||||||||| | |||||||    
T  48316801 cgtcaacgctgcagatccggaagcatgggtatt 48316769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 166 - 376
Target Start/End: Complemental strand, 1749343 - 1749140
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||||||  || ||||||||||||||||||||||| || ||| ||||||| |||||||| |||          ||||||||||||  |||||||||||    
T  1749343 tcttttttccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtg----------atttcgtcgtcttagtgcgacgttg 1749255  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 361  Q
    |||||||| ||||||||| |||| |||||||||||||| |  ||||||||  | ||||  |||||||  |||||||||||||||||||  |||||||| |    
T  1749254 tgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaa 1749155  T
Q  362 ttcaattgatgattt 376  Q
    ||||||  |||||||    
T  1749154 ttcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 397
Target Start/End: Original strand, 35132899 - 35133066
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgt--tgtggtgtttatttggtta 329  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| | |  ||| |  |||||||||  |||||||     
T  35132899 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgatttcacatcctttattgtgtggtgttcgtttggttc 35132998  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 397  Q
     ||||||||||||| |||||  |||||||| |||||||  ||||||||| || ||| |||| ||||||    
T  35132999 gtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 35133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 367
Target Start/End: Original strand, 5775172 - 5775294
Alignment:
Q  244 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||| ||||| ||||||||||||||||||||| | |||| || ||||||||||||| ||||||  ||| || ||||||| |||| |||||||||    
T  5775172 tcgtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtg-ttgtttggttcatatcgaaagatca 5775270  T
Q  344 gcttcaatcaatcacatattcaat 367  Q
    | |||| ||||||||||| |||||    
T  5775271 gattcagtcaatcacataatcaat 5775294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 166 - 374
Target Start/End: Complemental strand, 26623989 - 26623784
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||||||  || |||||||| |||||||||  ||| || | ||||||||| |||  |||| ||| ||||  ||||||| ||||||| ||||| |||||    
T  26623989 tcttttttccctttctttcaatttaaataagttgtttacacacatatcaagtttttcattttatgttttttg-tgatttcatcgtctgagtgcggcgttg 26623891  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca-atcaatcacatattc 364  Q
    |||||||| ||||||||||||||   ||||||||| || | |||||| ||||||| |||||||  ||||||||||||| |||||  |||||  |||||||    
T  26623890 tgttgttcgtcgtcttgtacggc---gtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttcaggtcaattgcatattc 26623794  T
Q  365 aattgatgat 374  Q
    |||| |||||    
T  26623793 aattaatgat 26623784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 412
Target Start/End: Complemental strand, 12141491 - 12141265
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| |||| |||||||  ||||||    
T  12141491 tttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtct 12141394  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||    ||||||||||||| ||||   ||||||| ||| |||  ||||| ||||||  | ||| ||||| ||| ||||||   |||||||||||    
T  12141393 tgtgcggc---atttgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgatttggac 12141297  T
Q  381 gccaatgttgtagatccggaagtaggggtatt 412  Q
    | ||| |||| ||||||||||| | |||||||    
T  12141296 gtcaacgttgcagatccggaagcatgggtatt 12141265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 146 - 398
Target Start/End: Complemental strand, 39329012 - 39328761
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--att 243  Q
    ||||||| ||||||| | ||  ||||| | ||| |||||||| |||||||||| ||| || | ||||||||| ||||||||| | | ||||  ||  |||    
T  39329012 ctagaattacccatctgcatcttttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttcttttttttctttttttgtgatt 39328913  T
Q  244 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||  || || ||||||||||||| ||||||||| |||||||   |||||||||||||||| | ||||||| |||  ||  ||||||||||||     
T  39328912 tcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcg 39328816  T
Q  344 gcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 398  Q
    || ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||    
T  39328815 gcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccg 39328761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 412
Target Start/End: Original strand, 19296806 - 19297004
Alignment:
Q  210 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 309  Q
    |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| ||||||||| ||||   |||||||||||| |||||    
T  19296806 tatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcattttg 19296901  T
Q  310 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggt 409  Q
    | | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||||||| ||| |||| ||||||||||| | ||||    
T  19296902 tcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggt 19297001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 47590217 - 47590327
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||| ||||  ||||| ||||||||||||| |||||    
T  47590217 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtc 47590315  T
Q  280 ttgtacggcgtt 291  Q
    |||| |||||||    
T  47590316 ttgtgcggcgtt 47590327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 48930724 - 48930794
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc 303  Q
    ||||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  48930724 ttttcatgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttcgc 48930794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 401
Target Start/End: Complemental strand, 8001673 - 8001514
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  ||||| |||| |||||||| ||||||||| |||||||   ||||||||||| |||| ||||||||| ||  |||  ||||||||    
T  8001673 tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaa 8001577  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaa 401  Q
    ||||  | ||||||||| ||| ||||||   |||||||||||| ||| |||| |||| |||||    
T  8001576 gatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaa 8001514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 166 - 367
Target Start/End: Complemental strand, 44311996 - 44311794
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattt--tcatgatttcgtcgtctgtgtgcgacgt 263  Q
    |||||||||  || ||||||||||||||||||| |||||| ||||| |||   ||||| | ||| | |||  || ||||||| ||||||| ||||| |||    
T  44311996 tcttttttctctttctttcaatctaaataagtggtttccacatataccaaactttttcctgtgtttttttcttcgtgatttcatcgtctgagtgcgtcgt 44311897  T
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 363  Q
    ||| |||||| ||||||| | || |||||||||||||| | ||||||||| || ||| |||||||  |||| ||||||| |||| | ||||| ||| |||    
T  44311896 tgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgt-gtatttgtttggtttctattaaaagatcggcttaagtcaattacaaatt 44311798  T
Q  364 caat 367  Q
    ||||    
T  44311797 caat 44311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||| || |||||| ||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 38051253 - 38051150
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| |||||||||| ||| |||| ||||||||||||| |||| ||||||||  ||||||||||||||| | ||  ||||| |||||||||||| |||||    
T  38051253 cttttaatctaaatatgtggtttcaatatatatcaagtttttttttttgtgttatttcatgatttcgtcatttgaatgcgatgttgtgttgttcgtcgtc 38051154  T
Q  280 ttgt 283  Q
    ||||    
T  38051153 ttgt 38051150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 390
Target Start/End: Complemental strand, 35665317 - 35665114
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||||||||        |||||| ||||  || |||||  |||||||| ||| ||||     
T  35665317 ctttcgatctaaataagtgatttcgaaatatatcaaatgttttcttttgtg--------tgattttgtcgggtgagtgcgttgttgtgttattcgtcgtt 35665226  T
Q  280 ttgtacggcgttgtttgatttcgcgt-tttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||| || ||||||||||||| |||| ||||||| ||| ||  |||| || |||| ||||||||| ||||| || |||| | |||||||  ||||||||     
T  35665225 ttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttga 35665126  T
Q  379 acgccaatgttg 390  Q
    ||| ||||||||    
T  35665125 acgtcaatgttg 35665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 29617807 - 29617726
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| ||||||| |||||| |||| ||  |||||||||||||    
T  29617807 gttgtgtagttcatcgtcaggtacggcgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatca 29617726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 969630 - 969473
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat---gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    |||||||||||||| || |||||  |||| ||||||| ||| | ||||| |   |||||| |||| ||  || | ||||||||||||| ||||||| | |    
T  969630 taaataagtgattttcacatataataagttttttcttgtgttttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgc 969531  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    ||||||||||||||| |||| || ||| ||||||| ||||||| ||||||||| ||||    
T  969530 ggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatca 969473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 366
Target Start/End: Original strand, 39228926 - 39229102
Alignment:
Q  185 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    |||||||||||||| ||| || | ||||||||  |||  |||||||| ||||  ||||||||| ||||| |||||  |||||||||||| |||||||||     
T  39228926 aatctaaataagtggttttcacacatatcaagactttcattttgtgttttttg-tgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtg 39229024  T
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 366  Q
    ||||   ||| |||||||||| |||||||| || |  |||||||  ||||||||||||| ||||| ||||| ||| ||||||    
T  39229025 cggc---gttagatttcgcgtcttgttgtgatg-tcgtttggtttctattgaaagatcaacttcagtcaattacagattcaa 39229102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 40993088 - 40993190
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| || ||    
T  40993088 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatc 40993186  T
Q  280 ttgt 283  Q
    ||||    
T  40993187 ttgt 40993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 377
Target Start/End: Complemental strand, 32675565 - 32675380
Alignment:
Q  192 ataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgt 290  Q
    ||||||||||| ||||||| ||| || ||||||||||| | |||| |||||||  ||||| || ||||||||||||||||||| || | ||||  ||       
T  32675565 ataagtgattttcatatatttcatgttttttcttttgtatttttttcatgattctgtcgtttgagtgcgacgttgtgttgttcgtcattttgtgtggtac 32675466  T
Q  291 tgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    | |||||||||  ||||||||||||| ||  |||||||  |||||||| ||  | |||||||||| |||||||| ||| ||||||||    
T  32675465 tatttgatttcttgttttgttgtggtattcgtttggtttctattgaaatat-ggtttcaatcaattacatattcgattaatgatttg 32675380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 39171776 - 39171547
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||| ||| ||||| |||||||| ||| ||||||||| ||||  |||||||||| |||  ||||  |||| |||||||| |||||    
T  39171776 ctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtgtttttttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtc 39171677  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| | ||   |||||||||  ||| ||||   | ||||| ||  |||   |||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  39171676 ttgtgcagc---gtttgattttacgtcttgtcacgatgtttgttcagttccaattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 39171580  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  39171579 cgtcaacgttgcagatccggaagcatgggtatt 39171547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 13797117 - 13797025
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    |||||||| ||||||||||||||  | || |||||||| ||| ||||||||| |||| |||||||||||||||  ||||| |||||||||||||    
T  13797117 ctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgtttttt-atgatttcgtcgtctaagtgcggcgttgtgttgttc 13797025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 48061329 - 48061486
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||||||||||  ||||| | || |||||||| |||||    
T  48061329 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtc 48061426  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    || |   |||  ||||||||| |||| |||| | ||||||| ||| |||  ||||||||||||    
T  48061427 ttat---gcgacgtttgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 48061486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 343
Target Start/End: Original strand, 6002000 - 6002104
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||||| |||| ||| | || | |||||||| ||||||||| ||||||||||||||||| ||| | || | |||||| ||||| || |||||||||    
T  6002000 tgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaa 6002099  T
Q  339 gatca 343  Q
    |||||    
T  6002100 gatca 6002104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 282
Target Start/End: Original strand, 11653751 - 11653886
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttt-tcttttgtgtattttcatgattt 244  Q
    ||||||||| ||||| | ||| |||||| ||||  ||  |||||||||||||||||| || |||||  |||| ||| | |||||||  ||||| ||||||    
T  11653751 ctagaatcatccatctgcattttttttttatttttttaaaatctaaataagtgattttcacatata--aagtttttattttttgtgctttttcgtgattt 11653848  T
Q  245 cgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 282  Q
    ||||||||| ||  ||||||||||||||| ||||||||    
T  11653849 cgtcgtctgagtatgacgttgtgttgttcgtcgtcttg 11653886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 402
Target Start/End: Complemental strand, 19404952 - 19404724
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 267  Q
    ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||| ||| ||||||   |||||  ||||||||||||||  ||||| |||| |     
T  19404952 ttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg---attttagtgatttcgtcgtctaagtgcggcgttcta 19404856  T
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    |||||| |||||||||   || | ||||||||| || | |||| | ||||||  ||| |||  | |||||||||   | ||  ||||| ||| |||||||    
T  19404855 ttgttcgtcgtcttgt---gcatcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgacatctgtcaattacaaattcaat 19404759  T
Q  368 tgatgatttggacgccaatgttgtagatccggaag 402  Q
      ||||||||| || |||||||| |||||||||||    
T  19404758 caatgatttgggcgtcaatgttgcagatccggaag 19404724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 367
Target Start/End: Original strand, 22087281 - 22087406
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||| ||||||| ||||||||||||||||| | | ||||||||   || |||||||||||| || ||||||  |||||| |||| |   ||||||||    
T  22087281 tgatttcatcgtctgggtgcgacgttgtgttgtccgttgtcttgta---cgatgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaa 22087377  T
Q  339 gatcagcttcaatcaatcacatattcaat 367  Q
    ||||| ||||| ||||| ||| |||||||    
T  22087378 gatcaacttcagtcaattacaaattcaat 22087406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 25067990 - 25068147
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| |||||  ||||  |||||||||||  ||||  ||||||| || |||| ||||| ||||||||||||| ||| |    
T  25067990 ctttcaatctaaataagtgatttccacatata--aagt-ctttcttttgtgcttttttgtgatttcatcatctgagtgcggcgttgtgttgttcgtcg-c 25068085  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||| ||| ||| ||| |||| || | |||||| ||||||  ||| |||  |||||||||||    
T  25068086 ttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 5348719 - 5348583
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||| |||| || ||||||||||| | || |||| |||   ||||||||||  ||| || ||| ||||||  |||||||  ||||||||    
T  5348719 tgatttcgtcgtctgagtgcaacattgtgttgttcgttgttttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaa 5348623  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||||  |||||||||| ||| |||||||  |||||||||    
T  5348622 gatcaatttcaatcaattacagattcaatcaatgatttgg 5348583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 31235863 - 31235786
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| | ||||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||||    
T  31235863 tgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 31235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||| |||| ||||||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||| | ||||||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 402
Target Start/End: Original strand, 38798747 - 38798905
Alignment:
Q  241 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 340  Q
    |||| |||||||  || |||||||||||||||| ||||||||| ||||   ||||||||| ||||||||| |  |||||| |||  ||  ||||||||||    
T  38798747 attttgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaaga 38798843  T
Q  341 tcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    || || ||| ||||| ||| ||||||   ||||||||| || |||  ||| |||||||||||    
T  38798844 tcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaag 38798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 4121856 - 4121734
Alignment:
Q  197 tgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgttt 295  Q
    ||||||||| ||||||||||  ||||||||| | | |||| | |||||||||||||||  |||| | ||||||||||||  || |||| || | ||||||    
T  4121856 tgatttccacatatatcaagctttttcttttatatttttttcgtgatttcgtcgtctggatgcggcattgtgttgttcactgtattgtgcgacattgttt 4121757  T
Q  296 gatttcgcgttttgttgtggtgt 318  Q
    |||||||| | |||||| |||||    
T  4121756 gatttcgcatcttgttgcggtgt 4121734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 14627950 - 14627874
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||| |||| ||||||||||||||||| ||| ||  |  |||||||||||| || |||||||||||||    
T  14627950 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatc 14627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 19560007 - 19560079
Alignment:
Q  269 tgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    ||||| ||||||||| ||||||||||||||||| | |||| |||  ||||| ||||| || ||||||||||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagat 19560079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| || |||||||||||||  ||| || ||| |||||| ||||| || |||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 32684674 - 32684746
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaa 32684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 35496246 - 35496170
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||||||||| ||||||||||| ||||| |||  |  || |||||| ||||| || |||||||||||||    
T  35496246 tgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatc 35496170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||| ||||||||  ||| || ||| |||||| ||||| || |||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 5078579 - 5078513
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtc 248  Q
    |||| |||||||||||||||||  | ||||||||||| ||||||||||||| ||||| | ||||||||    
T  5078579 tttcgatctaaataagtgatttttacatatatcaagt-ttttcttttgtgttttttcgtaatttcgtc 5078513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 301
Target Start/End: Original strand, 26583720 - 26583755
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttc 301  Q
    |||||||||||||||||| |||||||||||||||||    
T  26583720 tgttgttcatcgtcttgtgcggcgttgtttgatttc 26583755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 42067132 - 42067061
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| ||||||||| ||||| ||||||||||| ||| || ||| |||||| ||||| || ||||||||    
T  42067132 tgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 42067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 1100838 - 1100763
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgc---gttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||||||||||||| ||| ||||||||||||| |    ||||||||| ||||| ||||| || |||||||||    
T  1100838 tgttgttcatcgtcttgtgcggtgttgtttgatttcccttttttttgttgttgtgttcatttgttttatattgaaa 1100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 9977333 - 9977209
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  ||||  |||||| |||||| |||||||||  ||||||   ||||||||||| |||| | |||| | |||| |||  ||||||||    
T  9977333 tgatttcgtcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtt---tgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaa 9977237  T
Q  339 gatcagcttcaatcaatcacatattcaa 366  Q
    ||||  ||||| ||||| ||| ||||||    
T  9977236 gatcgacttcagtcaattacaaattcaa 9977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 22927941 - 22927865
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  22927941 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 22927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 26583644 - 26583676
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatc 213  Q
    |||||||||||||||||||||| ||||||||||    
T  26583644 tttcaatctaaataagtgattttcatatatatc 26583676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 34773717 - 34773793
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||| ||||||| | |||||||||||||||||  || || ||| |||||| ||||| || |||||||||||||    
T  34773717 tgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatc 34773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  |  |||||| ||||| || |||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 46818475 - 46818411
Alignment:
Q  278 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||| ||||||||||||||||| ||| |||||| |||||| ||||  || ||||| |||||||    
T  46818475 tcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatc 46818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 46822021 - 46822097
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| || |||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||| |||||||    
T  46822021 tgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatc 46822097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 8e-62; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 88 - 402
Target Start/End: Complemental strand, 29574910 - 29574596
Alignment:
Q  88 taagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttc-atttcctttcaa 186  Q
    |||||||| ||||||||||| |||| |||||||||  |||||||||||       || |||||||||||| |  | || |||||||| |||| |||||||    
T  29574910 taagttttatttctctttcactcgtcgaggaggggtggttttagatcatttttt-gacctagaatcaccc-tgtgcatccttttttccattttctttcaa 29574813  T
Q  187 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt--ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| ||  ||| ||||||||||||| | ||||| ||||||||||||| |||||||||     
T  29574812 tctaaataagtgatttccacatatatcaagtgtttt-ttttgtgttttgtttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtg 29574714  T
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 384  Q
    |||| |||||||||||| | ||||||||  |||||| |||| || |||||||||||| ||||||| ||||||||| |||||||  |||||||||||||||    
T  29574713 cggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagcttcagtcaatcacagattcaatcaatgatttggacgcca 29574614  T
Q  385 atgttgtagatccggaag 402  Q
    | |||| |||||||||||    
T  29574613 acgttgcagatccggaag 29574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 81 - 319
Target Start/End: Complemental strand, 12648208 - 12647971
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttca-tttc 179  Q
    |||||| |||||||||||||||||| | ||||||||||||||  ||||||| |||       || |||||||||||| |||  || ||||||||  |||     
T  12648208 ttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcatttttt-gacctagaatcacccctccacat-cttttttctctttt 12648111  T
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||  |||||  |||||||||||| |||||    
T  12648110 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtattttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtc 12648011  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 319  Q
    |||| ||||||||||||||||| ||| |||||| ||||||    
T  12648010 ttgtgcggcgttgtttgatttctcgtcttgttgcggtgtt 12647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 181 - 402
Target Start/End: Original strand, 24461351 - 24461575
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| | ||||| ||||||| | |||   ||||||||||||| | || |    
T  24461351 tttcaatctaaataagtgatttccacatatatcaagtgtttttttttgtgtttttacgtgattccgtcgtccgagtgttgcgttgtgttgttcgttgttt 24461450  T
Q  281 tgtacggcgttgtttgatt---tcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    ||| |||||||||||||||   | |||  |||||| ||||||  ||||||| |||||||||||||| ||||| |||| |||| ||||||| |||||||||    
T  24461451 tgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttg 24461550  T
Q  378 gacgccaatgttgtagatccggaag 402  Q
    |||||||| |||| |||||||||||    
T  24461551 gacgccaacgttgcagatccggaag 24461575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 32448808 - 32448587
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||||||| ||   |||||||| ||||| |||||||| ||||  ||||||||||||||  ||||||| ||||||||||| |||||    
T  32448808 ctttcgatctaaataagtgattttcaccaatatcaagcgttttattttgtgtttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtc 32448709  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| || ||||||||||||| || | |||||| |||| ||  |||||| |||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  32448708 ttgtgcgccgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttgga 32448610  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||| ||||    
T  32448609 cgtcaacgttgcagatccagaag 32448587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 180 - 367
Target Start/End: Complemental strand, 6359063 - 6358874
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| |||| | ||||||||||| ||||| ||||||| ||||| |||||| |||||||| ||| | ||||||||||||| |||||    
T  6359063 ctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtc 6358964  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    |||| | ||||||||||||||||| | |||||||  ||||||| |||||||  ||||||||||||| |||||  || ||||| |||||||    
T  6358963 ttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcacaaattcaat 6358874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 413
Target Start/End: Original strand, 3308853 - 3309088
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  ||||||||||||||| ||  ||||||    
T  3308853 tttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtct 3308951  T
Q  281 tgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    ||| |||||||||||||||| || |  ||||||||  ||||||  |||||||  |||||||| |||| |||||  |||||||| |||||||  |||||||    
T  3308952 tgtgcggcgttgtttgatttagcatcctttgttgtgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgattt 3309051  T
Q  377 ggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    || ||  || |||| |||||| |||| | ||||||||    
T  3309052 gggcgttaacgttgcagatccagaagcatgggtattc 3309088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 402
Target Start/End: Original strand, 10929627 - 10929797
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgttt-gatttcgcgttttgttgtggtgtttatttggttaat 331  Q
    ||||| ||||||||||||||| |||||  |||||||||||| |||||||||||| |||||||| ||||| |||| |||||| ||||||  ||||||| ||    
T  10929627 ttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcat 10929726  T
Q  332 attgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
     |||||| |||||||||| ||||||||| |||||||  |||||||||||  ||| |||| |||||||||||    
T  10929727 gttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaag 10929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 81 - 402
Target Start/End: Original strand, 37994090 - 37994416
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 180  Q
    ||||||||| ||||||||||||||||| || | ||||| |||  ||||||| |||       || |||||||||||| || | ||| | ||| |  || |    
T  37994090 ttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtcattttt--gacctagaatcacccctctgcattttgtttcccctttc 37994187  T
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt--attttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||| || |||||||||||||| || ||| ||||||||||||||| ||| |  || ||| ||||||||| ||||| ||||| ||||||||||||| || |    
T  37994188 tttcgatttaaataagtgattttcacatagatcaagtgttttcttgtgtttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtctt 37994287  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat-----attcaattgatga 373  Q
    | |||||||| ||||||||||| || | ||||||  ||||| ||||| || ||||||||| |||||||||| ||||||||||     |||||||  ||||    
T  37994288 cctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtcaatcacatcacaaattcaatgaatga 37994387  T
Q  374 tttggacgccaatgttgtagatccggaag 402  Q
    |||||||| ||  |||| |||||||||||    
T  37994388 tttggacgtcagcgttgcagatccggaag 37994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 234 - 413
Target Start/End: Complemental strand, 10237356 - 10237173
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggtta 329  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||||||| | ||||| |||||||||||   ||||||||||  |||||  |||||||     
T  10237356 tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttcgcatcttttgttgtgcagtgttcgtttggttc 10237257  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
     |||||||||||||||||||  |||||||| |||||||  |||||||||||| ||| |||| |||||| |||| | ||||||||    
T  10237256 gtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattc 10237173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 342
Target Start/End: Complemental strand, 43397320 - 43397147
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    ||||||| | ||| ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||| ||||||||||||||  ||| | |||||    
T  43397320 tctttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgtggcgttg 43397221  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||||||||  |||   |||||||||||||| |||| | ||||||  |||  || |||||||||||||    
T  43397220 tgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatc 43397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 378
Target Start/End: Complemental strand, 4904330 - 4904137
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  |||||||||||||   ||| | ||||||||||||| ||||||    
T  4904330 tttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtct 4904232  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||   |||  ||||||||| | || |||||| ||||||  ||||||| |||||||||||||  | ||| ||||| ||| |||||| |||||||||||    
T  4904231 tgt---gcgacgtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgacatcagtcaattacaaattcaactgatgatttgg 4904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 38445080 - 38445298
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||  ||||||||||||| |||||    
T  38445080 ctttcaatataaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtc 38445178  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||| | | ||||||| ||  |||  ||||||||||||  | ||| | ||| ||| ||||||   ||||||||||    
T  38445179 ttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctacatcagtaaattacaaattcaaccaatgatttgga 38445275  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  38445276 cgtcaacgttgcagatccggaag 38445298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 349
Target Start/End: Original strand, 14955436 - 14955608
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||||  | | ||||  |||||| |||||||   ||||||||||||||||||||| |     
T  14955436 ctttcaatctaaataagtgatttccacatacatcaagttttttctttcttattttttg-tgattttgtcgtcttaatgcgacgttgtgttgttcatcatt 14955534  T
Q  280 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttca 349  Q
    |||| ||||||||||||||||||| |  ||||||||  ||||||  ||||||| ||||||||| |||| |||||    
T  14955535 ttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcatattgaaatatcatcttca 14955608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 397
Target Start/End: Complemental strand, 17249274 - 17249120
Alignment:
Q  242 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||| ||||  ||||||| ||||||||||| ||||||||| |||||| |||| |||| || | |||||| ||||||| || |||| ||||||||||||    
T  17249274 tttcgttgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgtt-ggttcatattgaaagat 17249176  T
Q  342 cagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 397  Q
    ||| |||| ||||||||| |||||||  |||||||||||| ||| |||| ||||||    
T  17249175 cagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 17249120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 12647149 - 12647077
Alignment:
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    |||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  12647149 atattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaag 12647077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 376
Target Start/End: Original strand, 4264386 - 4264578
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| ||| |||||||||| ||| || ||||||||||| |||  |||||||| ||||  ||||||||||||| | ||| || |||| ||||||| |||||    
T  4264386 cttttaatttaaataagtggttttcacatatatcaagtttttcattttgtgttttttg-tgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtc 4264484  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    |||| |||   ||||||||||||||| || ||| |||||| ||||||||  ||||||||||||| ||||| ||||| ||| ||| |||  |||||||    
T  4264485 ttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaatcaatgattt 4264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 396
Target Start/End: Complemental strand, 31210781 - 31210581
Alignment:
Q  192 ataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgtt 291  Q
    ||||||| ||| || || |||||||| ||||||||||||| |||| |||||||||||||||  ||||| ||||||||||||  | ||||||| |||||||    
T  31210781 ataagtggttttcacatctatcaagttttttcttttgtgtttttt-atgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtt 31210683  T
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 391  Q
       ||||||||||| || | ||||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||||| ||| ||||     
T  31210682 ---tgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgc 31210586  T
Q  392 agatc 396  Q
    |||||    
T  31210585 agatc 31210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 36691788 - 36691885
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| |||| | ||||||||||| ||||||||||||| ||||| ||||||||||||||  ||||| |||| |||||||||||||    
T  36691788 ctttcaatctaaataagtggtttc-acatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgcggcgttttgttgttcatcgt 36691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 402
Target Start/End: Original strand, 1415529 - 1415689
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| |||||||   |||||||||||||||| | ||||||| |||  ||  ||||||||    
T  1415529 tgatttcgtcgtctaagtacgacgttgtgttgttcttcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaa 1415625  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    |||| || ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||||||    
T  1415626 gatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaag 1415689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 4099017 - 4099175
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  | ||||||||||||  ||||| ||||||||||||| | |||    
T  4099017 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtaatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 4099115  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||   ||||||||| ||||||||| ||||||||| ||  |||  ||||||||||||    
T  4099116 ttgtgcggc---gtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 4099175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 7448161 - 7448379
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||| || ||| || || |||||||| ||| ||||||||| ||||  ||||||||| ||||  ||||| ||||||||||||| |||||    
T  7448161 ctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtc 7448259  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | | ||||| ||  ||   | ||||||||||  | ||| ||||| ||||||||||   || |||||||    
T  7448260 ttgtgcggc---gtttgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtcaattacatattcaaccaataatttgga 7448356  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  7448357 cgtcaacgttgcagatccggaag 7448379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 4041780 - 4041670
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||||||| |||  ||||| ||||||||||||| |||||    
T  4041780 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcttctaagtgcgtcgttgtgttgttcgtcgtc 4041682  T
Q  280 ttgtacggcgtt 291  Q
    ||||||||||||    
T  4041681 ttgtacggcgtt 4041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 9169443 - 9169216
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| ||||||||||||| | |||    
T  9169443 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg--tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 9169346  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   |||| |||||||||| |||||||  | | ||||| || ||||  | ||||||||||  | ||| | ||| ||| ||||||   ||||||||||    
T  9169345 ttgt---gcgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaaagatctacatcagtgaattacaaattcaacgaatgatttgga 9169249  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  9169248 cgtcaacgttgcagatccggaagcatgggtatt 9169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 390
Target Start/End: Original strand, 14423236 - 14423445
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||| ||| | ||||| |||||||||| |||   || |||  | |||| ||| |||||    
T  14423236 ctttcaatctaaataagtgggttccacatatatcaagt-ttttcttgtgttttttttcttgatttcgtcatcttaatgtgacaatatgttattcgtcgtc 14423334  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |  |||||||||||||| | |||| ||| ||||||| |||||||  ||||||||||||  ||| | ||||| ||| ||| |||  ||||||||||    
T  14423335 ttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttgga 14423434  T
Q  380 cgccaatgttg 390  Q
    || ||| ||||    
T  14423435 cgtcaacgttg 14423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 398
Target Start/End: Original strand, 31788364 - 31788584
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| ||||||||||||||||||||||| || || ||||||||  || ||||||||| ||||  | ||||||||||||  |||||||||| ||||||||    
T  31788364 cattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtgtttttttgtaatttcgtcgtctaagtgcgacgttttgttgttc 31788463  T
Q  274 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 373  Q
     | ||||||| ||||   ||||||||| || | |||| | ||||||| ||  |||  ||||||||||||    ||||||||| ||| ||||||   ||||    
T  31788464 gttgtcttgtgcggc---gtttgattt-gcatcttgtcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatga 31788559  T
Q  374 tttggacgccaatgttgtagatccg 398  Q
    |||||||| ||| |||| |||||||    
T  31788560 tttggacgtcaacgttgcagatccg 31788584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 381
Target Start/End: Complemental strand, 23933806 - 23933608
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||||||||||| || || ||||||||| | |||||  |||||| ||||| ||||||  |||| || | ||||| |||||||| |  | ||||    
T  23933806 tttcaatctaaataagtgactttcacatatatcaatttttttc--ttgtgttttttcgtgattttttcgtttgagcgcgacattgtgttggttgttgtct 23933709  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||| ||||||||| || || | |||||| ||||||  |||||||  ||||||||| ||| ||||| ||||||||| |||||||  || ||||||||    
T  23933708 tgtgcggtgttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggac 23933609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 1421589 - 1421818
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgt-tttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| ||| || || |||||| | | ||| |||||||| ||||  ||||||||||||||  |||||  ||| |||||||| ||||    
T  1421589 ctttcaatctaaataagtggttttcacatctatcaattttattttttttgtgttttttg-tgatttcgtcgtctaagtgcggtgttatgttgttcgtcgt 1421687  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| | |||||   ||||||||||| |||| | ||||||| |   |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||    
T  1421688 cttgtgcagcgtt---tgatttcgcgtcttgtcgcggtgtttgtccagtttctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgg 1421784  T
Q  379 acgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||| ||| |||| ||||||||||| | |||||||    
T  1421785 acgtcaacgttgcagatccggaagcatgggtatt 1421818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 4778667 - 4778895
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||||| ||| | ||||||| ||||  |||||||||||| |  ||||| ||||||||| ||| |||||    
T  4778667 ctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtgttttttt-tgatttcgtcgtttaagtgcggcgttgtgttattcgtcgtc 4778765  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| | |||||   |||||||||||||| | | ||||||||||   ||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  4778766 ttgtgcagcgtt---tgatttcgcgttttctcgcggtgtttattcaattcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 4778862  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  4778863 cgtcaacgttgcagatccggaagcatgggtatt 4778895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 7646387 - 7646523
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||| ||| || || || ||||| ||| ||||||||| || |  ||||||||||||||  ||||| |||| |||||||| |||||    
T  7646387 ctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtgttttctg-tgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtc 7646485  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| ||||   ||||||||||||||||||| |||||||||    
T  7646486 ttgtgcggc---gtttgatttcgcgttttgtcgtggtgttt 7646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 11985416 - 11985260
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  ||||| | ||||||||||  | |||    
T  11985416 ctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgtgtttt-gtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtc 11985318  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 340  Q
    |||| ||||   ||||||||| |||| |||| | |||||| |||| |||  ||||||||||    
T  11985317 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaaga 11985260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 402
Target Start/End: Complemental strand, 27097585 - 27097374
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtac 285  Q
    |||||||||||||||||| | |  |||||||| ||| ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||| ||||||||| |    
T  27097585 atctaaataagtgatttc-acaactatcaagtttttccttttgtgttttttc-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgc 27097488  T
Q  286 ggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
    |||    ||||||||| | |||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||||||| |||    
T  27097487 ggc---atttgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaa 27097391  T
Q  386 tgttgtagatccggaag 402  Q
     |||| ||||| |||||    
T  27097390 cgttgcagatctggaag 27097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 398
Target Start/End: Complemental strand, 30400235 - 30400007
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg-atttcgtcgtctgtgtgcgacgttgt 266  Q
    ||||||| ||| |||| |||||||||||||| ||| || |||||||||   ||||||| ||||| ||||  |  ||||||||||||  ||||||| ||||    
T  30400235 ttttttctttttcttttaatctaaataagtgtttttcacatatatcaaaatttttcttctgtgtttttttttttatttcgtcgtctaagtgcgacattgt 30400136  T
Q  267 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 366  Q
    ||||||| ||||||||| ||||    |||||||| || |  ||| | ||||||  ||| |||  ||||||||||||| ||||| ||||| ||| ||||||    
T  30400135 gttgttcttcgtcttgtgcggc---atttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaa 30400039  T
Q  367 ttgatgatttggacgccaatgttgtagatccg 398  Q
    |  ||||||||| || ||| |||| |||||||    
T  30400038 tcaatgatttgggcgtcaacgttgcagatccg 30400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 34128813 - 34128712
Alignment:
Q  241 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 340  Q
    ||||||||||||| |||||  ||| |||||||| ||||||||| || ||||||||||||  |||| |||||||||||||| |||||||  |||| |||||    
T  34128813 atttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaaga 34128714  T
Q  341 tc 342  Q
    ||    
T  34128713 tc 34128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 389
Target Start/End: Original strand, 6436521 - 6436726
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||||||| || | |||| |||| |||||||||     ||||| ||||||| | ||||| ||| |  ||||||| |||| |||||    
T  6436521 ctttcgatctaaataagtgattttcacacatataaagttttttctttttatctttttcgtgatttcatggtctgagtgtggtgttgtgt-gttcgtcgtc 6436619  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| || ||||   |||||| || | |||||  ||||||  | ||||| ||| |||||||||||||||| ||||||| |||||||||  ||||||||||    
T  6436620 ttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaatcaatgatttgga 6436716  T
Q  380 cgccaatgtt 389  Q
    || |||||||    
T  6436717 cgtcaatgtt 6436726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 7678057 - 7677831
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||  ||| ||| |||||| || ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  7678057 ctttcaatctaaataagtggttttcacatctat--agtttttccttttgagttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 7677961  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| || |   ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  7677960 ttgtgcggc---gtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 7677864  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    |  ||| |||| ||||||| ||| | |||||||    
T  7677863 catcaacgttgcagatccgaaagcatgggtatt 7677831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 5428052 - 5427896
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||  |||| | || |||||||| ||||||||||||| |||   |||||||||||||   ||||| |||| |||||||| |||||    
T  5428052 ctttcaatctaaataagttttttc-acatctatcaagttttttcttttgtgtttttg--tgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtc 5427956  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||  ||||||   ||||||||||| |||| | ||||||| ||| ||| |||||| ||||||    
T  5427955 ttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatc 5427896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 29173905 - 29173805
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||| ||||||||| ||| || |||| ||| || ||| ||||||||| ||||  ||||||||||||||  ||||| |||||||||||||||||||    
T  29173905 ctttcaatccaaataagtggttttcacatatttcaggtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcatcgtc 29173807  T
Q  280 tt 281  Q
    ||    
T  29173806 tt 29173805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 33923615 - 33923837
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttctttt---gtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatc 276  Q
    |||||||| |||||||||| ||| || | |||| |||| |||||||||   || | ||||  ||||||||| ||||  || ||| ||| |||||||| ||    
T  33923615 ctttcaatttaaataagtggttttcacacatattaagttttttctttttttgtttttttttgtgatttcgttgtctaagtacgatgttctgttgttcgtc 33923714  T
Q  277 gtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    ||||||| |||||||   |||||||||||||| | ||||||||| |||  ||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||    
T  33923715 gtcttgtgcggcgtt---tgatttcgcgttttatcgtggtgtttgtttatttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgattt 33923811  T
Q  377 ggacgccaatgttgtagatccggaag 402  Q
    || || ||| |||| |||||||||||    
T  33923812 gggcgtcaacgttgaagatccggaag 33923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 36943309 - 36943149
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttt-tgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||  ||| || || |||||||| |||| ||| | | | ||||  ||||||||||||||  ||||| ||||||||||||| ||||    
T  36943309 ctttcaatctaaataagtagttttcacatctatcaagttttttttttgtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgt 36943210  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||| ||||   |||||||||||||| |||| | ||||||| ||| |||   |||||||||||    
T  36943209 cttgtgcggc---gtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatc 36943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 343
Target Start/End: Original strand, 35220245 - 35220398
Alignment:
Q  185 aatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    |||||||||||||| ||| || ||| ||||||| |||| | |||||| ||||  ||||||||||||||  ||||| | || ||||||||||||||||||     
T  35220245 aatctaaataagtggttttcacataaatcaagtttttt-tcttgtgttttttg-tgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtg 35220342  T
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    ||||   ||||||||| |||||||||   |||||| |||| |||  |||||||||||||    
T  35220343 cggc---gtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatca 35220398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 41694618 - 41694729
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||  ||||||||||||| ||||||| ||||||| | |||||| |||||||  ||||||  | |||||||||||||||||  |||| |||||||||    
T  41694618 tgttgtttgtcgtcttgtacggtgttgtttaatttcgcctcttgttgcggtgttt-cttggttcctgttgaaagatcagcttcagccaattacatattca 41694716  T
Q  366 attgatgatttgg 378  Q
    ||  |||||||||    
T  41694717 atcaatgatttgg 41694729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 459347 - 459269
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||| |||||||||||| |||||||||||||  ||| |||||| |||||| ||||| || |||||||||||||    
T  459347 tgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 288
Target Start/End: Complemental strand, 19062572 - 19062431
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 245  Q
    |||||||||||| ||   || |||||| | ||| ||||||||||||||||||| ||| || || |||||||| ||| ||||| ||| ||||  |||| ||    
T  19062572 ctagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttatgt-tttttgtgatatc 19062474  T
Q  246 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 288  Q
    |||||||  ||||  ||||||||||||| ||||||||| ||||    
T  19062473 gtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggc 19062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 28534061 - 28533943
Alignment:
Q  263 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatat 362  Q
    |||||||||||  |||||||| || ||||||||||||||   | |||||| ||||||  |||| ||  ||||||||||  ||||||| ||||||||| ||    
T  28534061 ttgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagat 28533962  T
Q  363 tcaattgatgatttggacg 381  Q
    |||||  ||||||||||||    
T  28533961 tcaataaatgatttggacg 28533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 270
Target Start/End: Complemental strand, 29279756 - 29279667
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttg 270  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||   |||| ||||||||||    
T  29279756 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaattgcggcgttgtgttg 29279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 18763381 - 18763600
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| ||| || ||  ||||||| || |||||||||| ||||   ||||||| ||||||  |||||  |||||||||||| ||||    
T  18763381 ctttcaatctaaataagtggttttcacatg-atcaagttttctcttttgtgttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgt 18763479  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| |||||||   ||||||||||| || |   ||||||  ||| |||  |||||||||||| || ||||||||| ||| ||||||   || ||||||    
T  18763480 cttgtgcggcgtt---tgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggcatcaatcaattacaaattcaaccaatcatttgg 18763576  T
Q  379 acgccaatgttgtagatccggaag 402  Q
     || ||| |||  |||||||||||    
T  18763577 gcgtcaacgttacagatccggaag 18763600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 19596073 - 19596013
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt 229  Q
    |||||||||||| ||||||| |||||||||||||| || |||||||||||||||| ||||||    
T  19596073 ttttttcatttc-tttcaatgtaaataagtgattttcacatatatcaagtgttttattttgt 19596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 381
Target Start/End: Complemental strand, 36175574 - 36175485
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    |||||||| ||||| |||||| ||||||  |||||||  ||||||||||||| | |||| |||| |||||||||||  ||||||||||||    
T  36175574 gtttgattccgcgtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacg 36175485  T

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Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 37416702 - 37416819
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 361  Q
    |||||||||||| ||||||||| || |||||||||||||| | | |||||||  ||||   |||||| ||||||||| |||| ||  | ||||||||| |    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatcacaga 37416801  T
Q  362 ttcaattgatgatttgga 379  Q
    ||||||  ||||||||||    
T  37416802 ttcaatcaatgatttgga 37416819  T

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Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||||| ||||||||| || |||||||||||||  ||| |||||| |||||| ||||| || ||||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

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Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 3725190 - 3725266
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| | ||||||||||||||||||||||||| ||| ||  |||||||||  |||| || |||||||||||||    
T  3725190 tgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatc 3725266  T

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Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 8805876 - 8805952
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| || |||||||||||||| ||| ||  ||||||||| ||||| || |||||||||||||    
T  8805876 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

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Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

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Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 343
Target Start/End: Original strand, 27949438 - 27949513
Alignment:
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||| | |||| ||||| || |||| |||||||||    
T  27949438 ttgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatca 27949513  T

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Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 36234020 - 36234094
Alignment:
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  36234020 ttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 36234094  T

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Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 9986413 - 9986337
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

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Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 31128965 - 31128864
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||  ||||  |||||||||| | |   |||| ||||||||||||  |||||    
T  31128965 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcatttaattgcggcgttgtgttgttagtcgtc 31128868  T
Q  280 ttgt 283  Q
    ||||    
T  31128867 ttgt 31128864  T

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Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 31580660 - 31580584
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  31580660 tgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaagatc 31580584  T

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Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 34598997 - 34599073
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||||||||| ||||||||||||||||  | | ||  || |||||| ||||| || |||||||||||||    
T  34598997 tgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 34599073  T

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Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 11812701 - 11812780
Alignment:
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    ||||||||||||| | || |||||| |||||||||||| ||  ||| ||||||||||||||| || || ||| |||||||    
T  11812701 cgttgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaat 11812780  T

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Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 338
Target Start/End: Original strand, 24587687 - 24587790
Alignment:
Q  235 ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 334  Q
    ||||||||||||| ||||| ||||| |  |||| | ||| |||||||||   |||||| |||||||| ||| |||||| |||||| |||| ||| |||||    
T  24587687 ttcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagttcatatt 24587786  T
Q  335 gaaa 338  Q
    ||||    
T  24587787 gaaa 24587790  T

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Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 25237345 - 25237298
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    |||||||||||||||||||  |||||||||||| |||||| |||||||    
T  25237345 tttcatgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctt 25237298  T

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Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || ||||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

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Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 402
Target Start/End: Original strand, 17151445 - 17151555
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 391  Q
    |||||||||||| | |||||  ||||||  |||| ||  |||||||||||||  |||| ||||| ||| |||||||  ||||||||| || | | |||||    
T  17151445 gtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgt 17151544  T
Q  392 agatccggaag 402  Q
    |||||||||||    
T  17151545 agatccggaag 17151555  T

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Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 18108021 - 18107983
Alignment:
Q  80 tttctctctaagttttctttctctttcagtcgttgagga 118  Q
    |||||||||||||||||||||||||||| || |||||||    
T  18108021 tttctctctaagttttctttctctttcattcattgagga 18107983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 366
Target Start/End: Complemental strand, 28871866 - 28871792
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 366  Q
    |||||||||||||| |||| | ||||||  |||||||  ||||||||||||| ||||| ||||| ||| ||||||    
T  28871866 gtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaa 28871792  T

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Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 16261268 - 16261328
Alignment:
Q  170 ttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgt 231  Q
    |||||||||| |||||||||||||||||| |||||| |||| | |||| | |||||||||||    
T  16261268 ttttcatttc-tttcaatctaaataagtggtttccacatatttaaagtttattcttttgtgt 16261328  T

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Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 280
Target Start/End: Original strand, 16375872 - 16375960
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||| |||||| || ||||||||||| ||||||| |||   ||||  ||||||| |||||||  |||| | ||||||||||||||||||    
T  16375872 taaataaatgattttcacatatatcaagttttttcttgtgt---tttttgtgatttcatcgtctgaatgcggcattgtgttgttcatcgtct 16375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Original strand, 23903376 - 23903480
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  23903376 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 23903474  T
Q  339 gatcag 344  Q
    ||||||    
T  23903475 gatcag 23903480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 2808543 - 2808467
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| | |||| || || || |||||||||||||    
T  2808543 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatc 2808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 352
Target Start/End: Complemental strand, 7443585 - 7443465
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgtttg-atttcgcgttttgttgtggtgtttatttggttaat 331  Q
    |||| |||||||| |||||  |||||||||||| |||||| ||||| |||| || |||||||||  ||||  ||||||||  ||| ||| || |||| |     
T  7443585 tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcag 7443486  T
Q  332 attgaaagatcagcttcaatc 352  Q
    |||| ||||||||||||||||    
T  7443485 attgtaagatcagcttcaatc 7443465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 18107848 - 18107749
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||| ||||||||| |||||||   |||||||||||  || || ||||||  ||||||| ||||||| |||| | | ||| ||||||||| |||||    
T  18107848 tgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattca 18107752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 18113881 - 18113957
Alignment:
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcag 344  Q
    ||||| || ||||||| ||||||||||||||||  ||| || ||| |||||| || ||||| ||||||||| |||||    
T  18113881 ttgtttatggtcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcag 18113957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 20145876 - 20145797
Alignment:
Q  220 tttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgattt 300  Q
    |||||||| ||| ||||||||||||  ||||||| ||| | ||||||||||||  | ||||||| ||||||||||| ||||    
T  20145876 tttctttt-tgttttttcatgattttatcgtctgagtgtggcgttgtgttgttggttgtcttgtgcggcgttgtttaattt 20145797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 26025481 - 26025405
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||| || ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || || ||||||||||    
T  26025481 tgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 28871948 - 28871864
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    |||||||| |||||||||||||| || | ||||||||| |||  |||||||| |||   ||||||||| ||||| ||||| ||||    
T  28871948 ctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgtttttatgtgatttcgttgtctgagtgcggcgtt 28871864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 29921956 - 29922173
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||   ||||    
T  29921956 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtc 29922055  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  | ||| |||||||||||||| |||||| ||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  29922056 ttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttgga 29922155  T
Q  380 cgccaatgttgtagatcc 397  Q
    || ||| |||| ||||||    
T  29922156 cgtcaacgttgcagatcc 29922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 29971109 - 29971326
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||   ||||    
T  29971109 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtc 29971208  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  | ||| |||||||||||||| |||||| ||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  29971209 ttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttgga 29971308  T
Q  380 cgccaatgttgtagatcc 397  Q
    || ||| |||| ||||||    
T  29971309 cgtcaacgttgcagatcc 29971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 182 - 398
Target Start/End: Original strand, 35175304 - 35175521
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| | | ||||||||||||| || |||| ||||||||||||||||||    
T  35175304 ttcaatctaaacaagtgatttccacatatatcaagtgttttcttttgtgtttttttcgtaatttcgtcgtctgagtacgacattgtgttgttcatcgtct 35175403  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| | |||||||||||||||  || |||||| ||||||  ||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  35175404 tgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaatcaatgatttggac 35175503  T
Q  381 gccaatgttgtagatccg 398  Q
      ||| |||| |||||||    
T  35175504 atcaacgttgcagatccg 35175521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 182 - 385
Target Start/End: Complemental strand, 12947464 - 12947258
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt---catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||   | |||||||||||| || ||||| | ||||||||||| ||||    
T  12947464 ttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgt 12947365  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| ||||||||||||||||||| | |||||||||||||  ||||||| ||||||||| |||| ||||| ||||||| | ||||||| ||||||||||    
T  12947364 cttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtcaatcatagattcaatcgatgatttgg 12947265  T
Q  379 acgccaa 385  Q
    |||||||    
T  12947264 acgccaa 12947258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 186 - 398
Target Start/End: Original strand, 29239247 - 29239460
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgta 284  Q
    |||||||||| |||||| || ||||||   |||||||||||||||| |||| | ||||||| ||||||| ||||| ||||||||||||| |||||||||     
T  29239247 atctaaataaatgattttcacatatattcggtgttttcttttgtgtttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtg 29239346  T
Q  285 cggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcca 384  Q
    ||||| ||||||||||| ||| |||||||||||||  |||||||  ||||| ||||||||||||| ||||||||| ||| |||  |||||||||||| |     
T  29239347 cggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtcaatcacagatttaatcaatgatttggacgtcg 29239446  T
Q  385 atgttgtagatccg 398  Q
    | ||||||||||||    
T  29239447 acgttgtagatccg 29239460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 180 - 381
Target Start/End: Original strand, 53508124 - 53508326
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||||||| || ||||||||||| ||||||| ||||| ||||| |||||||||||||||  |||| ||||||||||||| |||||    
T  53508124 ctttcaatataaataagtgattttcacatatatcaagttttttcttctgtgttttttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtc 53508223  T
Q  280 ttgtacggcgttgtttgattt-cgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||||||  |||||||||||| | ||||||||||  |||||  |||||||  |||||||||||||  | || | ||||||| |||||||  |||||||||    
T  53508224 ttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatcaaatccagttaatcacagattcaatcaatgatttgg 53508323  T
Q  379 acg 381  Q
    |||    
T  53508324 acg 53508326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 180 - 378
Target Start/End: Original strand, 51487004 - 51487207
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||||||||||||||||||||||  ||||| ||||| || |||||||  |||| ||||| |||||||||| |||  ||| ||||||||||||||| ||||    
T  51487004 ctttcaatctaaataagtgatttttatatacatcaaagttttttcttgcgtgttttttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgt 51487103  T
Q  279 cttgtacggcgttgtttgatttcg--cgttttgt--tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgat 374  Q
    ||||| ||||||||||||||||||    ||||||  |||||||||| ||||||| |||||||||||||| ||||   |||||||| |||||||| |||||    
T  51487104 cttgtgcggcgttgtttgatttcgtatcttttgttgtgtggtgtttttttggttcatattgaaagatcaacttcggacaatcacagattcaattaatgat 51487203  T
Q  375 ttgg 378  Q
    ||||    
T  51487204 ttgg 51487207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 412
Target Start/End: Original strand, 14859396 - 14859621
Alignment:
Q  186 atctaaataagtgatt-tc-catatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    |||||||||||||||| || || ||||||||||| ||||||||||||  ||||  |||||||| |||||| |||||  |||||||||||| || ||||||    
T  14859396 atctaaataagtgattatcacacatatatcaagttttttcttttgtgactttttgtgatttcgccgtctgagtgcggtgttgtgttgttcgtcatcttgt 14859495  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 383  Q
      | | ||   | |||| || | |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  14859496 gtgacatt---taattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtc 14859592  T
Q  384 aatgttgtagatccggaagtaggggtatt 412  Q
    || |||| |||||| |||| | |||||||    
T  14859593 aacgttgcagatccagaagcatgggtatt 14859621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 385
Target Start/End: Original strand, 4821713 - 4821911
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||| || ||||||| ||     |||||||||||||||||| || |||||||||| ||||||  |||||  ||||| |||||| ||||||    
T  4821713 tttcaatctaaataggttatttccacat-----aagtgttttcttttgtgttttctcatgatttcatcgtctaagtgcggtgttgtattgttcgtcgtct 4821807  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    |||  | | ||||||||||| |||| |||||| ||||||  ||||||| |||||||||||||||||| | |||||||||||||||||  |||||||||||    
T  4821808 tgt-tgacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggac 4821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 36461616 - 36461398
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  36461616 ctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 36461518  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  36461517 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 36461421  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||  ||||| |||||    
T  36461420 cgtcaacgttacagatctggaag 36461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 413
Target Start/End: Original strand, 16235307 - 16235558
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttc-catatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    ||||||||| |||  ||||||||||||||||||||||  || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||    
T  16235307 tcttttttccttttttttcaatctaaataagtgatttttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgtt 16235405  T
Q  265 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt----tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 360  Q
    |||||||||  |||||||| ||||||||||||||||||| |||| |    ||||||| |  |||||||  ||||||||||| || || |  ||||||||     
T  16235406 gtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagttttagacaatcacaa 16235505  T
Q  361 attcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||||||  ||||||||| || ||| |||| |||||  |||| | ||||||||    
T  16235506 attcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattc 16235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 376
Target Start/End: Complemental strand, 21290006 - 21289807
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||| |||||||||||||  | ||| ||||||| |||||||| |||| ||||  ||||||||||||||  ||||||||||||| ||||| | |||    
T  21290006 ctttcaatccaaataagtgattttaacatacatcaagt-ttttctttcgtgtttttttgtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtc 21289908  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| |||||||||||||||| ||   |||||||||  ||||||  |||||||  |||||||||||||||||||  |||||||| |||||||  ||||||    
T  21289907 ttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatt 21289808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 259
Target Start/End: Complemental strand, 50194567 - 50194390
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 180  Q
    |||||||||||||||| |||||||||| |||| ||| ||| |  |||||||||||       || ||| |||||||  || | || |||||| | ||  |    
T  50194567 ttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcatttttt-gacctaaaatcacctctctgcatcctttttcccttctc 50194469  T
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcg 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  50194468 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgcg 50194390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 42460650 - 42460766
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||| |||| ||||| ||||||||||||||  |||||   |||||||||||||||||    
T  42460650 ctttcaatctaaataagtgatttccacatacatcaagt-ttttctttcgtgt-ttttcgtgatttcgtcgtcttagtgcg---ttgtgttgttcatcgtc 42460744  T
Q  280 ttgtacggcgttgtttgatttc 301  Q
    |||| |||||||||||||||||    
T  42460745 ttgtgcggcgttgtttgatttc 42460766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 376
Target Start/End: Complemental strand, 27706409 - 27706219
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 288  Q
    |||||||||||||| || ||| ||||  | |||||||| |||| ||||| ||||||||||||||  ||| ||||||||||||||| ||||||||| ||||    
T  27706409 taaataagtgattttcacatacatcagat-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggc 27706311  T
Q  289 gttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    ||||||| |||||||   |||||||||  ||||||  |||||||  |||||||||||||||||  | |||||||| |||||||  |||||||    
T  27706310 gttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcacaaattcaatcaatgattt 27706219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 390
Target Start/End: Complemental strand, 53808045 - 53807837
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat-----gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||||||||| || | |||||| | |||||||||||||| ||||  |     |||||||||||||  ||||||| ||||||||||| ||||||    
T  53808045 atctaaataagtgattttcacaaatatcaggcgttttcttttgtgttttttttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtct 53807946  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    | | |||| ||||||||||| || | ||||||  |||||  || |||| |||||||||||||| ||||| ||||||||| |||||||  |||||||||||    
T  53807945 tctgcggcattgtttgatttggcatcttgttgctgtgttcgtt-ggttcatattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggac 53807847  T
Q  381 gccaatgttg 390  Q
    | ||| ||||    
T  53807846 gtcaacgttg 53807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 43488775 - 43488557
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||| ||||||| ||||  ||||||||||||||  ||| | ||||||||||||| |||||    
T  43488775 ctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgttttttg-tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtc 43488677  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||||| ||||||| ||  |||  |||||||| ||| || | ||||||| | | ||||||   |||||||| |    
T  43488676 ttgtgcggc---gtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcattaatcaattataaattcaagcaatgatttgaa 43488580  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  43488579 cgtcaacgttgcagatccggaag 43488557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 6954881 - 6954653
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||  || || || |||||||| |||  |||||||| ||||  ||||||||||||||  ||||| |||||| |||||| |||||    
T  6954881 ctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtc 6954783  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||||||||   ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  6954782 ttgtgcggc---gtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 6954686  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||||| || ||||||||||| | |||||||    
T  6954685 cgtcaatgctgcagatccggaagcatgggtatt 6954653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 413
Target Start/End: Original strand, 51923676 - 51923859
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggtta 329  Q
    |||| ||||||||||||||  ||| ||||||||||||||| || |||||| ||||||| |||||||| || |  |||||||||  |||||  |||||||     
T  51923676 tttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttc 51923775  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
     |||||||||||||||||||  ||||| || |||||||  |||||||||||| ||| |||| |||||| |||| | ||||||||    
T  51923776 gtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattc 51923859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 396
Target Start/End: Complemental strand, 4396517 - 4396307
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| ||||||||||||||||| ||     |||||||||||||||||  |||| | ||||||||| || |  ||||  |||||||||||  |||||    
T  4396517 ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgctttttga-gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtc 4396424  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  ||||||||||||||| |||  |||||| ||||||  |||| || |||||||||||| ||||||| ||||||| | ||||||| ||| |||| ||    
T  4396423 ttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatcgataattttga 4396324  T
Q  380 cgccaatgttgtagatc 396  Q
    |  |||||||| |||||    
T  4396323 catcaatgttgcagatc 4396307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 7546555 - 7546699
Alignment:
Q  226 ttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc---gttttgttgt--ggtgttt 320  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||     ||||||||  ||||||     
T  7546555 ttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttc 7546654  T
Q  321 atttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
     |||||||  |||||||||||||| ||||  |||||||| |||||    
T  7546655 gtttggttcgtattgaaagatcagtttcagacaatcacaaattca 7546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 402
Target Start/End: Original strand, 8914618 - 8914833
Alignment:
Q  190 aaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 289  Q
    ||||||| ||||| || ||| ||||||| |||||||| |||  ||||| ||||||||||||||  ||||||| ||||||||||| ||||||||| |||||    
T  8914618 aaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 8914716  T
Q  290 ttgtttgatttcg--cgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
     |||||||||| |    |||| |||||  |||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||||| || |||    
T  8914717 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaa 8914816  T
Q  386 tgttgtagatccggaag 402  Q
     |||| |||||| ||||    
T  8914817 cgttgcagatccagaag 8914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 380
Target Start/End: Original strand, 44804934 - 44805129
Alignment:
Q  187 tctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt---catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||   | |||||| |||||||  ||| | |||||||| ||| |  || ||||    
T  44804934 tctaaataagtgatttccacatatatcaagtgttttcttctgtgtttttttttcgtgattttgtcgtctaggtgtggcgttgtgt-gtttactgttttgt 44805032  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
     ||||||||||| ||||| ||| |||||| ||||||  ||||||  ||||||||| |||| | ||| |||||||||||| ||||  || ||||||||    
T  44805033 gcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac 44805129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 357
Target Start/End: Original strand, 41818164 - 41818287
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 332  Q
    ||||| ||||||| |||| || ||||||| ||||||||||| ||||||||| |||  |||||||||||||||| |||||||| ||||  ||| |||  ||    
T  41818164 ttttcgtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgttt-gttccta 41818262  T
Q  333 ttgaaagatcagcttcaatcaatca 357  Q
    ||||||||||| |||||||||||||    
T  41818263 ttgaaagatcaacttcaatcaatca 41818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 47042237 - 47042015
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatcg 277  Q
    |||||||| |||||||||||||| || |||||||| || ||||||||| | | ||||  ||  ||||||||||||  || |||||||||||||||| |||    
T  47042237 ctttcaatttaaataagtgattttcacatatatcatgttttttcttttttctttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcg 47042138  T
Q  278 tcttgtacggcgttgtttgatttcgcg-ttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
    |||||| ||||   ||||||||||||| |||||| | |||||| ||||  ||  ||||||||||||||| ||| ||| | ||| ||||||   ||| |||    
T  47042137 tcttgtgcggc---gtttgatttcgcgtttttgtagcggtgttcatttatttcctattgaaagatcagcatcagtcagttacaaattcaaccaatggttt 47042041  T
Q  377 ggacgccaatgttgtagatccggaag 402  Q
    || || ||| |||| |||||||||||    
T  47042040 gggcgtcaacgttgaagatccggaag 47042015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 10108140 - 10108275
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  10108140 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 10108237  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  10108238 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 10108275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 10232974 - 10233109
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  10232974 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 10233071  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  10233072 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 10233109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 378
Target Start/End: Original strand, 32246393 - 32246544
Alignment:
Q  227 tgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttgg 326  Q
    ||||| ||||| ||||||| ||||||| ||||||  || |||||||  |||| |||| || |||||||||||| ||||| |||||| | |||| | ||||    
T  32246393 tgtgttttttcgtgatttcatcgtctgagtgcgaaattatgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttgg 32246492  T
Q  327 ttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||  ||||||||||||| ||||| | |||||||||||||||  |||||||||    
T  32246493 ttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttgg 32246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 378
Target Start/End: Complemental strand, 7805592 - 7805475
Alignment:
Q  261 cgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacat 360  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||| | ||  ||||||||||||||||||  || | |||||||||||||| ||| |||||     
T  7805592 cgttgtgttgttcgtcgtcttatacggcattgtttgttttcgcatgttaatgtggtgtttatttggttcctactaaaagatcagcttcagtcattcacaa 7805493  T
Q  361 attcaattgatgatttgg 378  Q
    ||||||| | ||||||||    
T  7805492 attcaatcggtgatttgg 7805475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 9998371 - 9998528
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| |||  |||||||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  9998371 ctttcaatctaaataagtggttttcacgtctatcaagtttttcattttgtgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 9998468  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||| |||  | ||||||||||    
T  9998469 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatc 9998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 413
Target Start/End: Complemental strand, 51303782 - 51303599
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggtta 329  Q
    |||| |||||||||||| |  ||||||||||||||||||  ||||||| |  || ||||||||||||||| |  |||||||||  |||||  |||||||     
T  51303782 tttcgtgatttcgtcgttttagtgcgacgttgtgttgtttgtcgtcttatgaggtgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttt 51303683  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
     ||||||||||||||||||   |||||||| |||||||  ||||||||| || ||| |||| |||||| |||| | ||||||||    
T  51303682 gtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattc 51303599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 395
Target Start/End: Complemental strand, 20465154 - 20464944
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||| ||||||||||||||  | ||||||||||| ||| ||||||||| ||||  ||||||| ||||||  ||| |  |||||||||||| ||||||    
T  20465154 tttcaatataaataagtgattttaacatatatcaagtttttccttttgtgt-tttttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtct 20465056  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||||||||   ||||||||| |||| |||| | |||||| ||||   |  ||||||||||||   |||| ||||| ||| |||||||  ||||||||| |    
T  20465055 tgtacggc---gtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttcagtcaattacaaattcaataaatgatttgggc 20464959  T
Q  381 gccaatgttgtagat 395  Q
    | |||||||| ||||    
T  20464958 gtcaatgttgcagat 20464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 21533990 - 21533836
Alignment:
Q  184 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||||||| ||| || || |||||||| ||||||| | | | ||||  ||||||||| |||| |||||| ||||||||||||| |||||||||    
T  21533990 caatctaaataagtggttttcacatctatcaagttttttcttgtattttttttg-tgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgt 21533892  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||   ||||| |||||||| |||| | ||||||| ||| |||  ||||||||||||    
T  21533891 acggc---gtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 21533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 47896055 - 47896273
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| ||||  |||||||||||||   ||| | ||||||||||||| | |||    
T  47896055 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtc 47896153  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||| ||| |||| | ||| ||| ||| |||  |||||||||||   | ||| ||||| ||| ||||||   |||||||||     
T  47896154 ttgtgcggc---gtttgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagatttacatcagtcaattacaaattcaaccaatgatttggg 47896250  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    ||  ||||||| | |||||||||    
T  47896251 cgtaaatgttgcatatccggaag 47896273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 29249215 - 29249317
Alignment:
Q  263 ttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatat 362  Q
    |||||||||||||||| |||| | ||||| ||||||||||  | || |||||||||| ||||| || || ||||||||||||||||| |||||| |||||    
T  29249215 ttgtgttgttcatcgttttgtgcagcgttctttgatttcgaatcttattgtggtgttcatttgattcatcttgaaagatcagcttcagtcaatcgcatat 29249314  T
Q  363 tca 365  Q
    |||    
T  29249315 tca 29249317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 52923302 - 52923074
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||   ||||| |||||||  ||| | || |||||||||| |||||    
T  52923302 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtctttt-gggattttgtcgtctaagtgtggcgctgtgttgttcgtcgtc 52923204  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||    | | ||||| ||| ||||||   ||||||||||    
T  52923203 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctatattagtcaattacaaattcaaccaatgatttgga 52923107  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  52923106 cgtcaacgttgcagatccggaagcatgggtatt 52923074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 22290841 - 22290998
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| |||||||||||||||||| || |||||| || | ||| ||||||||| ||||||||||||||| ||| | |||   |||||||||||||| ||||    
T  22290841 cttttaatctaaataagtgattttcacatatattaaatttttccttttgtgttttttcatgatttcgtagtccgagtgtatcgttgtgttgttcaccgtc 22290940  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    ||||     |||||||||||| || | |||||| ||||||  |||||||  |||||||    
T  22290941 ttgtgtcatgttgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 412
Target Start/End: Original strand, 32701426 - 32701622
Alignment:
Q  210 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 309  Q
    |||||||| ||| ||||||||| ||||  || |||||||||||  ||||| |||||| ||||   ||||||||| |||||||   |||||||||||||||    
T  32701426 tatcaagtttttccttttgtgttttttg-tgctttcgtcgtctaagtgcggcgttgtattgtg--tcgtcttgtgcggcgtt---tgatttcgcgttttg 32701519  T
Q  310 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggt 409  Q
    ||| | ||||| ||  |||  ||||||||||||  | |||| |||| ||| |||||||  ||||||||| || ||| |||||||||||||||| | ||||    
T  32701520 ttgcgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagcatgggt 32701619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 381
Target Start/End: Original strand, 10229380 - 10229576
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   |||||||||| |||  ||||| ||||||||||||| || ||    
T  10229380 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcttctaagtgcggcgttgtgttgttcgtcatc 10229477  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  10229478 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 10229574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 40487228 - 40487387
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| ||| ||  | | |||||| ||||||||| ||||||||   ||||||||||||||  ||||| ||||||||||||| ||||    
T  40487228 ctttcaatctaaataagtggttttcacttctttcaagt-ttttctttt-tgtattttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgt 40487325  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||| ||||||  ||||||||||||| |||| | ||||||| ||  |||  ||||||||||||    
T  40487326 cttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 40487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 628969 - 628890
Alignment:
Q  323 ttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||||  ||| ||||||||||| ||||    
T  628969 ttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaag 628890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 381
Target Start/End: Complemental strand, 35865119 - 35864920
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt--ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 277  Q
    ||||||||||||||||||  ||| || ||||||||||| ||||||||||||| ||  ||  ||||||||||||||   |||| ||||||||||||  |||    
T  35865119 ctttcaatctaaataagtagttttcacatatatcaagt-ttttcttttgtgttttaatttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcg 35865021  T
Q  278 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    ||||||  ||||||   |||||| |||| || | | ||||||  ||| |||  ||||||||||||  | ||||||||| ||| |||||||  ||||||||    
T  35865020 tcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatcaatcaattacaaattcaatcaatgatttg 35864924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 396
Target Start/End: Complemental strand, 48650919 - 48650707
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||  ||||||| ||| || || |||||||| ||| ||||||||| ||||  |||||| |||||||  ||||| | ||||||||||| | |||    
T  48650919 ctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgattttgtcgtctaagtgcggcattgtgttgttcgttgtc 48650821  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||| ||   ||||||||||| |||| | ||||||| ||  |||  |||||||||||| || ||||||||| ||| ||||||   || |||||||    
T  48650820 ttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgcatcaatcaattacaaattcaaccaataatttgga 48650724  T
Q  380 cgccaatgttgtagatc 396  Q
    || ||| |||| |||||    
T  48650723 cgtcaacgttgcagatc 48650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 9319961 - 9320096
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||| ||||||||| ||| || || |||||||| ||| ||||||||| |||| |||||||||| ||||   |||| | ||||||||||| ||||||    
T  9319961 tttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtgtttttt-atgatttcgttgtctaaatgcggcattgtgttgttcgtcgtct 9320059  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    ||| || ||||   |||||| |||||||||||| ||||||    
T  9320060 tgtgcgacgtt---tgattttgcgttttgttgtcgtgttt 9320096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 21431522 - 21431638
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| ||||||||||||||||||| ||| || || |||||||| |||  |||||||| ||||  |||||||| |||||  ||||| | |||||||||||    
T  21431522 cattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtgt-tttttgtgatttcgccgtctaagtgcggcattgtgttgttc 21431620  T
Q  274 atcgtcttgtacggcgtt 291  Q
     ||||||||| |||||||    
T  21431621 gtcgtcttgtgcggcgtt 21431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 366
Target Start/End: Complemental strand, 26739477 - 26739360
Alignment:
Q  249 gtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttc 348  Q
    ||||| |||| ||| |||||||||||| ||||||| |||||| ||||||||| || | |||||||| ||| | |||||||  ||||||||||| | ||||    
T  26739477 gtctgagtgcaacgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagattaacttc 26739378  T
Q  349 aatcaatcacatattcaa 366  Q
     |||||||| | ||||||    
T  26739377 gatcaatcatagattcaa 26739360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 38860304 - 38860147
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||  ||||||||| ||| || || |||||||| ||||| ||||||| |||   ||||||||||||||  |||||||||| |||||||| |||||    
T  38860304 ctttcaattcaaataagtggttttcacatctatcaagttttttcctttgtgtttttg--tgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtc 38860207  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||   | |||||||||||| |||| | ||||||| ||| |||  ||||| ||||||    
T  38860206 ttgtgcggc---gattgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatc 38860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 45568629 - 45568504
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||  ||| || || |||||||| ||||||||| ||| |||   ||||||||||||||  ||||| ||||||||||||| |||||    
T  45568629 ctttcaatctaaataagttgttttcacatctatcaagttttttcttttctgtttttg--tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 45568532  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgt 310  Q
    ||||  |||   |||||||||||||| ||||    
T  45568531 ttgtgtggc---gtttgatttcgcgtcttgt 45568504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 25842634 - 25842714
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 319  Q
    |||||| ||||| || |||||||||||||||||||||| |||| | |||  |||||||||||| ||| |||||||||||||    
T  25842634 tgattttgtcgtttgagtgcgacgttgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgtggtgtt 25842714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 33579759 - 33579827
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 236  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||| ||| ||||||||||||| ||||    
T  33579759 tttttccattttctttcaatctaaataagtgattttcacatatatctagttttttcttttgtgtttttt 33579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 50194374 - 50194302
Alignment:
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||||||| |||||||| ||||||||| ||||||| |||||||||||||  || |||| |||||||||||    
T  50194374 atattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaag 50194302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 3606738 - 3606837
Alignment:
Q  243 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||||||||| ||||| | ||||||||||| |||||||||  |||||||| |||| || ||| |||||||||||||  ||||||   ||||||||||||    
T  3606738 ttcgtcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttggtatctattgaaagatc 3606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 52496934 - 52497005
Alignment:
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcaca 359  Q
    |||||||||||||| ||| |||||| ||||||  |||| ||  |||||||||||||||||||||||||||||    
T  52496934 cgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatcagcttcaatcaatcaca 52497005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 9797714 - 9797491
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| | | ||||||||| ||||  ||||||||||||||  |||||     | ||||||| |||||    
T  9797714 ctttcaatctaaataagtggttttcacatctatcaagtttctacttttgtgt-tttttgtgatttcgtcgtctaagtgcg-----gcgttgttcgtcgtc 9797621  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||| |||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||| |    
T  9797620 ttgtgcggc---gtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaa 9797524  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||  || |||| ||||||||||| | |||||||    
T  9797523 cgttaacgttgcagatccggaagcatgggtatt 9797491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 40556624 - 40556725
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 288  Q
    |||||||||| ||| ||||| |||||||| ||  ||||||||| || |  ||||||||||||||  ||||| ||||||||||||| ||||||||| ||||    
T  40556624 taaataagtggttttcatatctatcaagttttcccttttgtgttttatg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggc 40556722  T
Q  289 gtt 291  Q
    |||    
T  40556723 gtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 54148892 - 54149053
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| ||| || || |||||||| |||||||||||  | ||||  ||||||||||||||  ||||| | ||||||||||| ||||    
T  54148892 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtattttttttgtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgt 54148991  T
Q  279 ct-tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||  || ||||    ||||||||||||| |||| | ||||||| ||| |||  ||||||||||||    
T  54148992 ctaagtgcggc---atttgatttcgcgtattgtcgcggtgtttgtttagttcctattgaaagatc 54149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 22803025 - 22803102
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||| | ||||||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||||    
T  22803025 tgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 22803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 36906125 - 36906202
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  ||| ||||| ||||| || ||||||||||||||    
T  36906125 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatca 36906202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 36910826 - 36910699
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||| ||||| ||||  |||||||| | |||  ||||| |||| |||||||| |||||    
T  36910826 ctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtgtttttttgtgatttcg-cctctaagtgcggcgttttgttgttcgtcgtc 36910728  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgtt 311  Q
    |||| ||||   |||||||||||||| |||||    
T  36910727 ttgtgcggc---gtttgatttcgcgtcttgtt 36910699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 398
Target Start/End: Original strand, 38545760 - 38545916
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| ||||   |||||||||||||| |||| | ||||||| |||  ||   |||||||    
T  38545760 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaa 38545856  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 398  Q
    ||||  | ||| ||||| ||| ||||||   ||||||||| || ||| |||| |||||||    
T  38545857 gatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccg 38545916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 281
Target Start/End: Complemental strand, 52116187 - 52116093
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtg---tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    |||||||||||||| || ||||||||||| ||||||||||||   | |||||||||||||||||||| | ||||  | |||||||||| |||||||    
T  52116187 taaataagtgattttcacatatatcaagttttttcttttgtgtttttttttcatgatttcgtcgtct-tatgcggtgctgtgttgttcgtcgtctt 52116093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 1649323 - 1649480
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||  ||||||| | |   ||||  ||||||||||||||| ||| | |||||| ||||||  ||||    
T  1649323 ctttcaatctaaataagtggttttcacatatatcaaga-ttttcttgttt---tttttgtgatttcgtcgtctgagtgtggcgttgtattgttctccgtc 1649418  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||| |||| |||||||||||| ||||||  |||||  ||| |||  ||||||||||||    
T  1649419 ttgtgcggtgttg-ttgatttcgcgtcttgttgatgtgttcttttagttcctattgaaagatc 1649480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 20987984 - 20987913
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 252  Q
    |||||||| |||||||||||||| || ||||||| ||| ||||||||||||| ||||  ||||||||||||||    
T  20987984 ctttcaatttaaataagtgattttcaaatatatcgagttttttcttttgtgt-tttttgtgatttcgtcgtct 20987913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 21488094 - 21488166
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||  ||||||||| ||||||||||||||||| ||| || ||| |||||||||||| || |||||||||    
T  21488094 tgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaa 21488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 49552295 - 49552219
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| ||| |||||| ||||  || | |||||||||||    
T  49552295 tgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatc 49552219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || ||| |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 4019695 - 4019752
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgttt 295  Q
    ||||||||||||||  ||||||||||||||||||| ||||| |||| |||||||||||    
T  4019695 tgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 310
Target Start/End: Complemental strand, 12149982 - 12149843
Alignment:
Q  167 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 266  Q
    |||||||  ||| |||| || ||||||||||| |||  | ||||||| ||| ||| |||||||| |||||  |||||||||| |||  ||||| ||||||    
T  12149982 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtg-atttttgtgatttcgtcatctaagtgcggcgttgt 12149884  T
Q  267 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt 310  Q
     |||||||||||||||| | ||   |||||||||||||| ||||    
T  12149883 attgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgt 12149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 29921857 - 29921898
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggagggg 122  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  29921857 ttctctctaagttttctttctctttcattcgtcgaggagggg 29921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 29971010 - 29971051
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggagggg 122  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  29971010 ttctctctaagttttctttctctttcattcgtcgaggagggg 29971051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 31271989 - 31271885
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttg 282  Q
    ||||||||||||| || ||| || || |||||||| ||||||||||||| ||||  ||||||| ||||||  |||||   ||||||||||| ||||||||    
T  31271989 tcaatctaaataaatggttttcacatttatcaagttttttcttttgtgt-tttttgtgatttcttcgtctaagtgcggttttgtgttgttcgtcgtcttg 31271891  T
Q  283 tacggc 288  Q
    | ||||    
T  31271890 tgcggc 31271885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 48199788 - 48199877
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    |||||||||||  | |||||||||||||  |||||||  ||||||||||||| ||||||||||| | | ||| |||  ||||||||||||    
T  48199788 gtttgatttcgtatcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacg 48199877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 4178568 - 4178644
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||| ||||||||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4178568 tgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatc 4178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 12050832 - 12050723
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| |||||| ||||||| ||| || || |||||||| || |||||||||| |||   ||||||||||||||  | ||| |||| |||||||| |||||    
T  12050832 ctttaaatctagataagtggttttcacatctatcaagttttatcttttgtgtttttg--tgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtc 12050735  T
Q  280 ttgtacggcgtt 291  Q
    |||| |||||||    
T  12050734 ttgtgcggcgtt 12050723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12116101 - 12116177
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| | ||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  12116101 tgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 12116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 25162439 - 25162515
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| | | ||  || |||||| ||||| || |||||||||||||    
T  25162439 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatc 25162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| ||  || |||||| ||||| || |||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 32607472 - 32607547
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 37040669 - 37040782
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| ||||||||||||||||||| ||| || |||   ||||||||| ||||||||| ||||  |||||| |||||||  || | ||| ||||||| ||    
T  37040669 cattttctttcaatctaaataagtggttttcacata---caagtgtttccttttgtgt-tttttgtgattttgtcgtctaagtacaacgctgtgttggtc 37040764  T
Q  274 atcgtcttgtacggcgtt 291  Q
     ||||||||| |||||||    
T  37040765 gtcgtcttgtgcggcgtt 37040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 43564837 - 43564758
Alignment:
Q  241 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    ||||||||||||| || ||||  |||| |||||||||| |||| ||| |||| |||||||| ||| ||||||| ||||||    
T  43564837 atttcgtcgtctgagtacgacactgtgatgttcatcgttttgtgcggtgttgattgatttcacgtcttgttgtagtgttt 43564758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 342
Target Start/End: Complemental strand, 44960128 - 44959979
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc 288  Q
    |||||||||| ||| || || ||| |||| ||| ||||| ||| ||||  ||||||||||||||  |||||  ||||| || ||| ||||||||| ||||    
T  44960128 taaataagtggttttcacatctattaagtttttccttttatgttttttg-tgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggc 44960030  T
Q  289 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||   |||||| ||||||||| ||||||||| ||  |||  ||||||||||||    
T  44960029 gtt---tgattttgcgttttgtcgtggtgtttgttcagtttttattgaaagatc 44959979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 7887523 - 7887434
Alignment:
Q  291 tgtttgatttcgcgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||||||||||| | ||||||||  |||||  ||| |||  ||||||||||||| |||||  ||||||||||||| ||| |||||||||    
T  7887523 tgtttgatttcgcatcttgttgtgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgg 7887434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 31794072 - 31794150
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| |||| |||| ||||||||||||||||    | |||||| |||||| ||||| || |||||||||||||    
T  31794072 tgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 7887594 - 7887562
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatat 212  Q
    ||||||||||||||||||||||||||| |||||    
T  7887594 ctttcaatctaaataagtgatttccatgtatat 7887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 18010922 - 18011033
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||| ||||||| ||||| ||| || ||||||||| || ||| ||||||||| ||||  ||||| |||  |||  ||| |||||||||||||||||| |    
T  18010922 ctttcgatctaaaaaagtggttttcacatatatcaaagtttttccttttgtgttttttg-tgattccgttatctaagtgtgacgttgtgttgttcatcat 18011020  T
Q  279 cttgtacggcgtt 291  Q
    ||||| |||||||    
T  18011021 cttgtgcggcgtt 18011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 25631597 - 25631521
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||||||  |||||||| ||||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  25631597 tgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatc 25631521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 166 - 412
Target Start/End: Original strand, 30493420 - 30493665
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||||||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||  ||||    
T  30493420 tcttttttccctttctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtgt-ttttcgtgatttcctcgtctgagtgcggtgttg 30493518  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||| ||||||||| | ||||||||||||||||  | ||||| |||||||  ||||||| |||||||||||||| ||||| |||||| ||||||||    
T  30493519 tgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaacttcagtcaatctcatattca 30493618  T
Q  366 attgatgatttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||  |||||||||||| ||| |||| | ||||||||| | |||||||    
T  30493619 atcaatgatttggacgtcaacgttgcaaatccggaagcatgggtatt 30493665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 8102624 - 8102844
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || | | ||||||| ||||||||||||| ||||| ||||||||||||||  |||| |||||||||| ||| |||||    
T  8102624 ctttcaatctaaataagtgattttcacaaacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtc 8102722  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| |||||||||||||||||||   |||||||||  ||||||| |||||||  |||||||||||||||||||  |||||||| ||||| |  ||||||    
T  8102723 ttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatt 8102822  T
Q  376 tggacgccaatgttgtagatcc 397  Q
    ||| || ||| |||| ||||||    
T  8102823 tgggcgtcaacgttgcagatcc 8102844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 181 - 390
Target Start/End: Complemental strand, 32191916 - 32191709
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||| | ||||| |||||| |||||||  ||||| ||||||||||||| | | ||    
T  32191916 tttcgatctaaataagtgatttctacatatatcaagtgttttcttttgtattttttcgtgattttgtcgtctaagtgcggcgttgtgttgttcgttgact 32191817  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    |||  ||||||||||| |||||  | |||||  |||||| |||||||| || |||||| |  ||||||| |||||||||||||||||  |||||||||||    
T  32191816 tgtgtggcgttgtttggtttcgtatattgtttcggtgttcatttggttcatcttgaaaaa--agcttcagtcaatcacatattcaatcaatgatttggac 32191719  T
Q  381 gccaatgttg 390  Q
    ||||| ||||    
T  32191718 gccaacgttg 32191709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 181 - 401
Target Start/End: Complemental strand, 1933882 - 1933660
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcga-cgttgtgttgttcatcgt 278  Q
    |||| |||||||||||| |||| || ||||||||||| ||||||||||||| |||| | ||||||||||||||| | | |  |||||||||| |  ||||    
T  1933882 tttcgatctaaataagttattttcacatatatcaagttttttcttttgtgtttttttcgtgatttcgtcgtctgagagtgggcgttgtgttgctagtcgt 1933783  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| |||| ||||||||||| | || | |||| ||||||| ||||||| ||||  |||||||| ||||||||||||||| |||||||  |||||||||    
T  1933782 cttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcacagattcaatcaatgatttgg 1933683  T
Q  379 acgccaatgttgtagatccggaa 401  Q
    ||| ||| |||| ||||||||||    
T  1933682 acgtcaacgttgcagatccggaa 1933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 379
Target Start/End: Complemental strand, 26588689 - 26588462
Alignment:
Q  143 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 242  Q
    |||||| |||||||||||   ||| ||||| |||||| ||| |||||||||||||| |||||| ||||||||||| |||| ||||||||        ||     
T  26588689 gatctataatcacccatcttcattttttttccatttctttt-aatctaaataagtggtttccacatatatcaagtttttttttttgtgt--------gaa 26588599  T
Q  243 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||| |||| || |||||  ||||||||| |  ||||||||| ||||||||||||||||| ||| |||||| ||||||  ||||||| |||||||||||||    
T  26588598 ttcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T
Q  343 agcttcaatcaatcacatattcaattgatgatttgga 379  Q
    | ||||| ||||||||| |||||||| ||||||||||    
T  26588498 aacttcagtcaatcacacattcaattaatgatttgga 26588462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 191 - 413
Target Start/End: Complemental strand, 7976355 - 7976143
Alignment:
Q  191 aataagtgatttccatatatatcaagtgttttcttttgtgtatttt-catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 289  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||| | ||||||||||||||| |||||  |||||||||||| ||||||||| |||||    
T  7976355 aataagtgatttccacatatat-aagtgttttcttttgtgtttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcg 7976257  T
Q  290 ttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgtt 389  Q
    || ||| |||  |||| |||||||||||||  ||| ||| ||||| ||||          |||||||||| |||||||| || ||||||||| ||| |||    
T  7976256 ttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaag----------atcaatcacagattcaattaattatttggacgtcaacgtt 7976167  T
Q  390 gtagatccggaagtaggggtattc 413  Q
    ||||||||||||| | ||||||||    
T  7976166 gtagatccggaagcatgggtattc 7976143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 412
Target Start/End: Original strand, 28981067 - 28981310
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||||||  || |||||||||||||||||||||||||| |||||||||||||||| |||| |   ||||  ||||||  ||||||| || || |||||    
T  28981067 tcttttttccctttctttcaatctaaataagtgatttccacatatatcaagtgttttttttttt---tttttgtgattttatcgtctgagtacggcgttg 28981163  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||| ||||||| | ||| |||||||||||| |  | |||||||||||||  ||||||| ||||| |||||| || || | ||||||||| |||||    
T  28981164 tgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatcacagattca 28981263  T
Q  366 attgatgatttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||  ||||| | |||| |||  ||| ||||||| ||||| |||||||    
T  28981264 atcaatgatcttgacgtcaacattgcagatccgaaagtatgggtatt 28981310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 30776570 - 30776689
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||| || ||    
T  30776570 ctttcaatctaaataagtaatttccacatacatcaagt-ttttcttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatc 30776668  T
Q  280 ttgtacggcgttgtttgattt 300  Q
    |||| ||||||||||||||||    
T  30776669 ttgtgcggcgttgtttgattt 30776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 413
Target Start/End: Original strand, 545928 - 546165
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||  |||| || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||| ||||||| |||||    
T  545928 ctttcaatctaaataagcaattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtc 546026  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcac-atattcaattgatgat 374  Q
    |||| || |||||||||||||| |   |||||||||  ||||||  |||||||  |||||||||||||||||||  ||||||| | |||||||  |||||    
T  546027 ttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaaattcaatcaatgat 546126  T
Q  375 ttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    |||| || ||| |||| |||||| |||| | ||||||||    
T  546127 ttgggcgtcaacgttgcagatccagaagcatgggtattc 546165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 402
Target Start/End: Original strand, 31296796 - 31296943
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 354  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||| || | ||||||  ||||| ||||| || ||||||||| ||||| |||| ||||    
T  31296796 gtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagtcaa 31296895  T
Q  355 tcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||  |||||||||||||||||| |||| ||| |||| |||||||||||    
T  31296896 tccaatattcaattgatgatttagacgtcaacgttgcagatccggaag 31296943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 33053353 - 33053125
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  33053353 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 33053255  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   |||||||| |    
T  33053254 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgaa 33053158  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  33053157 cgtcaacgttgcagatccggaagcatgggtatt 33053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 23128517 - 23128751
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| |||||| |||||||||||| ||| || || |||||||| ||| ||||||| | ||||  ||||||| ||||||  ||||| |||||||||||||    
T  23128517 cattttctttcattctaaataagtggttttcacatctatcaagtttttccttttgtattttttg-tgatttcatcgtctaagtgcggcgttgtgttgttc 23128615  T
Q  274 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 373  Q
     |||||||||  ||||||   |||||||||||||||| |  |||||| ||  |||  ||||||||||||| | ||| ||||| ||| |||||||  ||||    
T  23128616 gtcgtcttgtgtggcgtt---tgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaacatcagtcaattacaaattcaatcaatga 23128712  T
Q  374 tttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    |||||| | ||| |||||||||||||||| | |||||||    
T  23128713 tttggatgtcaacgttgtagatccggaagcatgggtatt 23128751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 412
Target Start/End: Complemental strand, 3913794 - 3913531
Alignment:
Q  146 ctagaatcacccatccgtattcttttttc--atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatt 243  Q
    |||||||||||| |||| || ||||||||  |||  ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  | |||    
T  3913794 ctagaatcacccctccgcat-cttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgttatt 3913697  T
Q  244 tcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||  ||||| ||||||||||||| |||||||||   ||   |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||     
T  3913696 tcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgt---gcaacgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatct 3913600  T
Q  344 gcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
     | ||||||||| ||| ||||||   ||||||| |||| ||| |||| |||||| |||| | |||||||    
T  3913599 acatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatt 3913531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 413
Target Start/End: Original strand, 1523310 - 1523542
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||    || ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  1523310 ctttcaatctaaataagtgatttccacatacatcaagt-ttttctt----gttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 1523404  T
Q  280 ttgtacggcgttgtttgatttcgc--gttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| || | |||||||||||| |   |||| ||||  ||||||  |||||||  |||||||| |||||||| |  ||||| ||  ||||||  ||||||    
T  1523405 ttgtgcgacattgtttgatttcacatattttattgtgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatctcaacttcaatcaatgatt 1523504  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    || ||| ||| |||| |||||| |||| | ||||||||    
T  1523505 tgaacgtcaacgttgcagatccagaagcatgggtattc 1523542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 402
Target Start/End: Original strand, 14801735 - 14801950
Alignment:
Q  190 aaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcg 289  Q
    ||||||| ||||| || ||| ||||||| |||||||| |||  ||||| ||||||||||||||  ||||||| ||||||||||| ||||||||| |||||    
T  14801735 aaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcg 14801833  T
Q  290 ttgtttgatttcg--cgttttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaa 385  Q
     |||||||||| |    |||| |||||  |||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||||| || |||    
T  14801834 ctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaa 14801933  T
Q  386 tgttgtagatccggaag 402  Q
     |||| |||||| ||||    
T  14801934 cgttgcagatccagaag 14801950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 366
Target Start/End: Original strand, 22571457 - 22571562
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattg-aaagatcagcttcaatcaatcacat 360  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||  |||||||||||||| ||| |||||||||| || || |||     
T  22571457 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaaaaatcagcttcagtcgattacaa 22571556  T
Q  361 attcaa 366  Q
    ||||||    
T  22571557 attcaa 22571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 32327402 - 32327184
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||| | ||||  ||||| ||||||||||||| |||||    
T  32327402 ctttcaatataaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcatagtctaagtgcggcgttgtgttgttcgtcgtc 32327304  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||| | ||||||||||   ||  ||||||||||||  | ||||||||| ||| ||||||   ||||||| ||    
T  32327303 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatcaattacaaattcaagcaatgattttga 32327207  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    ||  || |||| |||||||||||    
T  32327206 cgttaacgttgcagatccggaag 32327184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 367
Target Start/End: Complemental strand, 11321659 - 11321471
Alignment:
Q  175 atttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttca 274  Q
    |||| ||||||||||||||||||| ||| || |||||| |||| |||||||||||||| ||| |||||||||||||||  |||||  ||||||||||||     
T  11321659 attttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtgtaattt-atgatttcgtcgtcttagtgcggtgttgtgttgttcg 11321561  T
Q  275 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    | ||| || | | |   |||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  | ||| ||||| ||| |||||||    
T  11321560 tggtcctgcatgac---gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaat 11321471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 402
Target Start/End: Complemental strand, 31852315 - 31852160
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||  |||||||| ||| ||||| ||||| |||        ||||| |||||||||    
T  31852315 tgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgaacaacgttgttttattccgcgtcttgttctgg--------tggtttatattgaaa 31852224  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||| ||||| |||| |||| ||| |||  |||||||| ||| ||| |||| |||||||||||    
T  31852223 gatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaag 31852160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 34018459 - 34018567
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| |||||||| |||||||||| ||| || ||||||||||| ||||||||||||| ||||  ||||||||||||||  ||| | |||||||||||||    
T  34018459 cattttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgtggcgttgtgttgttc 34018557  T
Q  274 atcgtcttgt 283  Q
     |||||||||    
T  34018558 gtcgtcttgt 34018567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 401
Target Start/End: Original strand, 606109 - 606326
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||| | ||| |||||||||  |||  ||||||||||||||  ||||| ||||||||||||| || ||    
T  606109 ctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtgttatttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatc 606207  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||| |||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| | | ||||||   ||||||||||    
T  606208 ttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattataaattcaaccaatgatttgga 606304  T
Q  380 cgccaatgttgtagatccggaa 401  Q
    |  ||| |||| ||||||||||    
T  606305 catcaacgttgcagatccggaa 606326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 377
Target Start/End: Original strand, 678996 - 679207
Alignment:
Q  167 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgttg 265  Q
    |||||| || || ||||||||||||||||  ||||| || ||||||||||| ||||||| | | | || ||| ||||||||||||  | ||||  | | |    
T  678996 ctttttccactttctttcaatctaaataaccgattttcacatatatcaagttttttcttgttttttttcttcgtgatttcgtcgttcgagtgcagcatag 679095  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||||||| || |||| | |||||| ||||  ||| |||| |||||||||| ||  |||||||  ||||||||| |||| |||| |||||||||||||||    
T  679096 tgttgttcgtcatcttatgcggcgtagtttagttttgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattca 679195  T
Q  366 attgatgatttg 377  Q
    ||  ||||||||    
T  679196 atcaatgatttg 679207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 68186 - 68050
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| |||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||| |  |||||||| |||| ||||    
T  68186 cttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgtggtgttgtgttattcaccgtc 68088  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| |||||||   |||||||||||||||| |||||||||    
T  68087 ttgtgcggcgtt---tgatttcgcgttttgtcgtggtgttt 68050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 404
Target Start/End: Complemental strand, 528493 - 528315
Alignment:
Q  226 ttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttg 325  Q
    |||||| ||||| |||||||||||||   ||||||||||||||| ||  || |||||| |||||||||||||||| | || ||||||  |||||| |||     
T  528493 ttgtgttttttcgtgatttcgtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttc 528394  T
Q  326 gttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagta 404  Q
    |||  ||| ||||||||||||||| | ||| ||||||| |||  || |||||| || ||| |||| |||| | ||||||    
T  528393 gttcttatcgaaagatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagattctgaagta 528315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 402
Target Start/End: Original strand, 127583 - 127792
Alignment:
Q  188 ctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg 287  Q
    ||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||  ||||||||||||| |||||||||   |    
T  127583 ctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgt---g 127678  T
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatg 387  Q
     |   |||||||||||| ||||| | |||||| |||| |||  ||||||||||||  | ||| ||||| ||| |||| ||  ||||||||| || ||| |    
T  127679 tgacatttgatttcgcg-tttgtcgcggtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacg 127777  T
Q  388 ttgtagatccggaag 402  Q
    ||| |||| ||||||    
T  127778 ttgcagattcggaag 127792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 377
Target Start/End: Original strand, 19164657 - 19164809
Alignment:
Q  225 tttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttattt 324  Q
    ||||||| ||||| |||||| |||||||||||||| ||||||||||||  ||||||||| ||   ||||||||||| | ||  |||||||||| |  |||    
T  19164657 tttgtgttttttcctgattttgtcgtctgtgtgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgtggtgatcgttt 19164756  T
Q  325 ggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    | |  ||||||||||| | ||||||  || | |||||||||||  ||||||||    
T  19164757 gctctatattgaaagaccggcttcagccacttacatattcaatcaatgatttg 19164809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 25064242 - 25064318
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||  || |||||| ||||| || |||||||||||||    
T  25064242 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatc 25064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 7515382 - 7515251
Alignment:
Q  184 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||||||| ||| || || |||||||| | ||||||||||| |||   ||||||||||||||  ||||| |||| |||||||| ||||||||     
T  7515382 caatctaaataagtggttttcacatctatcaagtttcttcttttgtgtttttg--tgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttg- 7515286  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
      ||||  |||||||||||||| |||| | |||||||    
T  7515285 --ggcgacgtttgatttcgcgtcttgtcgcggtgttt 7515251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 341
Target Start/End: Complemental strand, 28635192 - 28635117
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||||||| ||||||||||||| ||| | |||| |||||| ||||| || ||||||||||||    
T  28635192 tgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagat 28635117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 34222793 - 34222876
Alignment:
Q  275 tcgtcttgtacggcgttg-tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 357  Q
    |||||||||||| ||||| |||||||||| || |||||||||| || |||||||| ||| |||||||||| ||||| |||||||    
T  34222793 tcgtcttgtacgacgttgttttgatttcgtgtcttgttgtggttttcatttggttcataatgaaagatcaacttcattcaatca 34222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 402
Target Start/End: Complemental strand, 29320034 - 29319845
Alignment:
Q  210 tatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttg 309  Q
    |||||||| ||| ||||||||| ||||  |||||| |||||||  ||||| ||||||||||||| || |||| | ||||   |||||||||||||| |||    
T  29320034 tatcaagtttttccttttgtgtttttttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggc---gtttgatttcgcgtcttg 29319938  T
Q  310 ttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    | | ||||||| ||   || |||||||||||||  | ||| ||||| ||| ||||||   |||||||| ||| ||| |||| | |||||||||    
T  29319937 tcgcggtgtttgttaacttcatattgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaag 29319845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 291
Target Start/End: Original strand, 32059798 - 32059924
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctt-ttgtgtattttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    ||||||| | ||| ||||||||||||||||||  ||| || || |||||||| |||| || || ||| ||||  ||||||| ||||||  ||| ||||||    
T  32059798 tctttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttttttcttctgtttttttgtgatttcttcgtctaagtgtgacgtt 32059897  T
Q  265 gtgttgttcatcgtcttgtacggcgtt 291  Q
    ||||||||| ||||||||| |||||||    
T  32059898 gtgttgttcgtcgtcttgtgcggcgtt 32059924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 349
Target Start/End: Complemental strand, 34185823 - 34185713
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||| |||| || ||||| | ||||| ||||  |||||||||  | ||||||||||||| |||| |||||||||||||  ||| ||| |||||||||    
T  34185823 tgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaa 34185724  T
Q  339 gatcagcttca 349  Q
    ||||| |||||    
T  34185723 gatcaacttca 34185713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 22571358 - 22571442
Alignment:
Q  144 atctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt 229  Q
    ||||||||||| ||||| | || |||||||| | | ||||  |||||||||||||||||||| ||||||||||| |||||||||||    
T  22571358 atctagaatcaaccatctgcat-cttttttcctcttcttttgatctaaataagtgatttccacatatatcaagttttttcttttgt 22571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 34489254 - 34489327
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||||| ||||||||| || |||||||||||||| | | ||||||||||||| ||||| || ||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| | | || ||| |||||| ||||| || |||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||  ||| ||||||||||||  ||| |||||| |||||| ||||| || |||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 4984638 - 4984562
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4984638 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatc 4984562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 8496973 - 8497049
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| || |||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  8496973 tgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatc 8497049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 12170481 - 12170601
Alignment:
Q  292 gtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgt 391  Q
    |||||||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   |||||||||| | ||| ||||     
T  12170481 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgc 12170580  T
Q  392 agatccggaagtaggggtatt 412  Q
    ||||||||||| | |||||||    
T  12170581 agatccggaagcatgggtatt 12170601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 12652950 - 12653026
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||||||||| ||||||||||||||||  | | ||  || |||||| ||||| || |||||||||||||    
T  12652950 tgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 12653026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 33110617 - 33110693
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||||||||||| ||| ||||||||||||| ||| ||  || |||||| ||||| || ||||| |||||||    
T  33110617 tgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatc 33110693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 402
Target Start/End: Original strand, 3355074 - 3355240
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 332  Q
    |||| |||||||| ||||||  |||||  |||||||||||| || ||||||   | |  |||||||||||||| |||||||||||||  ||| |||  ||    
T  3355074 tttttatgatttcatcgtctaagtgcggtgttgtgttgttcgtcctcttgt---gtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttccta 3355170  T
Q  333 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||| ||  | ||| ||||| | | |||||||  |||||||||||| |||  ||| |||||||||||    
T  3355171 ttgaaaggtcgacatcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaag 3355240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 301
Target Start/End: Original strand, 4088466 - 4088501
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttc 301  Q
    |||||||||||||||||| |||||||||||||||||    
T  4088466 tgttgttcatcgtcttgtgcggcgttgtttgatttc 4088501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 10228685 - 10228760
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || |||||||||| ||||  ||  |||||||||||    
T  10228685 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagat 10228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 13546788 - 13546683
Alignment:
Q  241 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaaga 340  Q
    |||||||||| || ||||| ||||||||||||| ||||||| | ||||   ||||||||| |||  ||||||| |||||  ||||| | || ||||||||    
T  13546788 atttcgtcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattttgcgccttgttgtagtgttcgtttggatcattttgaaaga 13546692  T
Q  341 tcagcttca 349  Q
    ||| |||||    
T  13546691 tcaacttca 13546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 5417212 - 5417155
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc-ttgtacggcgttgttt 295  Q
    |||||||||||||| ||||||||||||  |||||| ||||| |||| |||||||||||    
T  5417212 tgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgttt 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 31575637 - 31575564
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttg 312  Q
    |||||||||| ||||  ||||  ||| |||||||||||||| ||| || |||||||||||||| ||| ||||||    
T  31575637 tgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttg 31575564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 35001596 - 35001673
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  |||||||||||||    
T  35001596 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatca 35001673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 12170400 - 12170471
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 252  Q
    ||||||||||||||||||| ||| || || |||||||| |||  |||||||| ||||  ||||||||||||||    
T  12170400 ctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtgt-tttttgtgatttcgtcgtct 12170471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 14801074 - 14801158
Alignment:
Q  143 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctttt 227  Q
    ||||||||||||||| || ||||  ||||| |  || |||||||||||||||||| |||| || ||| ||||||| |||| ||||    
T  14801074 gatctagaatcacccctctgtatattttttcccctttctttcaatctaaataagtaattttcacatacatcaagttttttttttt 14801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 16419164 - 16419236
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  || |||||||||    
T  16419164 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaa 16419236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 33543693 - 33543657
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgattt 300  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 33543657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 10332737 - 10332515
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||  || || |||||||||||||||  |||||    
T  10332737 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgttttttcgtgattttgtcgcatgagtacgacgttgtgttgtttgtcgtc 10332638  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||| |||||||||||||||| ||||||  |||||| |||| || |||||||||||| ||  ||| |||||||||||||| || |||||||| ||    
T  10332637 ttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacatattcgatcgatgatttaga 10332538  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    | |||| |||| |||||||||||    
T  10332537 caccaacgttgcagatccggaag 10332515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 28541098 - 28540863
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||| ||||||  ||||||||||||||||||| |||||    
T  28541098 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtc 28541000  T
Q  280 ttgtacggcgttgtttgatttcgcgt--tttgt--tgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| ||||||||||||||||||| |  |||||  |||||||||  |||||||  ||||||||||| |||||||  |||||||| |||||||  ||||||    
T  28540999 ttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatt 28540900  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    ||| || ||| |||| |||||| |||| | |||||||    
T  28540899 tgggcgtcaacgttgcagatccagaagcatgggtatt 28540863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 413
Target Start/End: Complemental strand, 2979498 - 2979262
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  2979498 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc 2979400  T
Q  280 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| ||||||||||| ||| ||| |  ||| ||||  ||||||  |||||||  |||| |||||||| |||||  |||||||| |||||||  ||||||    
T  2979399 ttgtgcggcgttgtttcattccgcatccttttttgtgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatt 2979300  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    ||| || ||| |||| |||||| |||| | ||||||||    
T  2979299 tgggcgtcaacgttgcagatccagaagcacgggtattc 2979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 397
Target Start/End: Complemental strand, 8088412 - 8088184
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttca-tgatttcgtcgtctgtgtgcgacgtt 264  Q
    |||||||||  || ||||| ||||||||||||||||| || | |||||||  |||||||||||||| ||||   ||||||||||   |  ||||||| ||    
T  8088412 tcttttttctctttctttcgatctaaataagtgattttcacaaatatcaaacgttttcttttgtgttttttttgtgatttcgtc---taagtgcgacctt 8088316  T
Q  265 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 364  Q
    |||||||| |||||||||| |||||||||||||||| || | ||||||  |||||  || |||| |||||||||||||||||||| ||||||||| ||||    
T  8088315 gtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagattc 8088217  T
Q  365 aattgatgatttggacgccaatgttgtagatcc 397  Q
    |||  |||||||||||| ||| |||| ||||||    
T  8088216 aatcaatgatttggacgtcaacgttgcagatcc 8088184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 412
Target Start/End: Original strand, 38597700 - 38597928
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||||||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  38597700 ctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgctttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 38597798  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   ||||||||||| |||| ||||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  38597799 ttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 38597895  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  38597896 cgtcaacgttgcagatccggaagcatgggtatt 38597928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 234 - 413
Target Start/End: Original strand, 14211176 - 14211359
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 329  Q
    |||| ||||||||||||||  ||||||| ||||||||||| ||||||||| ||||||||||||||||||| |  ||||||||  ||||||  |||||||     
T  14211176 tttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 14211275  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
     |||||||||||||||||||  |||||||| || ||||  |||||||||||| ||| |||| |||||| |||| | ||||||||    
T  14211276 gtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattc 14211359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 399
Target Start/End: Complemental strand, 24229970 - 24229754
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || || ||||||||  |||||||||||| ||||  |||||||||| |||  ||||| |||| |||||||| |||||    
T  24229970 ctttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtc 24229871  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   | |  |||||||||||||| |||| | ||||||| ||| |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  24229870 ttgt---gtgacgtttgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 24229774  T
Q  380 cgccaatgttgtagatccgg 399  Q
    || |||||||| ||||||||    
T  24229773 cgtcaatgttgcagatccgg 24229754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 174 - 412
Target Start/End: Original strand, 13007126 - 13007360
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||||||||||||    
T  13007126 cattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttc 13007224  T
Q  274 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 373  Q
     ||||||||| ||||   ||||||||| | ||||||| | ||||||| ||| |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||    
T  13007225 gtcgtcttgtgcggc---gtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatga 13007321  T
Q  374 tttggacgccaatgttgtagatccggaagtaggggtatt 412  Q
    |||||||| ||| |||| ||||||||||| | |||||||    
T  13007322 tttggacgtcaacgttgcagatccggaagcatgggtatt 13007360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 19103659 - 19103434
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||| ||||||||||||||||| || ||| ||||||| ||||||||  ||| ||||| ||||||||||||||  ||||||||||||||||||  |||||    
T  19103659 ctttcgatctaaataagtgattttcacatacatcaagt-ttttctttcatgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtc 19103561  T
Q  280 ttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||| ||||||||||||||||| | |  ||||||||  ||||||  |||| ||  ||| ||||||| |||||||  |||||||| |||||||  ||||||    
T  19103560 ttgtgcggcgttgtttgatttcacatcatttgttgtgcggtgttcgtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatt 19103461  T
Q  376 tggacgccaatgttgtagatccggaag 402  Q
    ||| || |||| ||| |||||| ||||    
T  19103460 tgggcgtcaatattgcagatccagaag 19103434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 39567198 - 39567320
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||| |||| ||||| |||| |||||||||  ||||||||||||||||||| | |||    
T  39567198 ctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtc 39567296  T
Q  280 ttgtacggcgttgtttgatttcgc 303  Q
    |||| |||||||||||||||||||    
T  39567297 ttgtgcggcgttgtttgatttcgc 39567320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 6012323 - 6012095
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| ||||  ||||||| ||||||  |||||  |||||||||||| |||||    
T  6012323 ctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgttttttg-tgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtc 6012225  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   |||||||||||||||| | ||||||| ||  |||  |||| |||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  6012224 ttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattcaaccaatgatttgga 6012128  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || |||||||||||||||||||| | |||||||    
T  6012127 cgtcaatgttgtagatccggaagcatgggtatt 6012095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 233 - 402
Target Start/End: Complemental strand, 35921132 - 35920963
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaata 332  Q
    ||||| ||||||||||||||| ||||||| || | |||||| ||||||| |  | |||||||||||||||||| |||||| |||||| ||||| ||  ||    
T  35921132 ttttcgtgatttcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttccta 35921033  T
Q  333 ttgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    || ||||||||  |||||||||||||| |||||||  |||||||| ||| ||| |||| |||||||||||    
T  35921032 ttaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaag 35920963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 14726647 - 14726428
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||| |||||| ||| |||||||||||||| ||||||| ||||| ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  14726647 ctttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgtttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 14726548  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   ||| ||||||||||||||| ||||   ||||||  |||  ||  |||||||||||| || ||| ||||||||| ||||||   |||||||||     
T  14726547 ttgt---gcgatgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttggg 14726451  T
Q  380 cgccaatgttgtagatccggaag 402  Q
     | ||| |||| |||||||||||    
T  14726450 tgtcaacgttgaagatccggaag 14726428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 174 - 402
Target Start/End: Complemental strand, 9113916 - 9113692
Alignment:
Q  174 catttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||| |||| |||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||| ||||||||    
T  9113916 cattttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttctgttgttc 9113818  T
Q  274 atcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatga 373  Q
     ||||||||| ||||   |||||||||| |||||||| | ||||||| ||  |||  | ||||||||||  | ||| ||||| ||| ||||||   ||||    
T  9113817 gtcgtcttgtgcggc---gtttgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatga 9113721  T
Q  374 tttggacgccaatgttgtagatccggaag 402  Q
    |||||||| ||| |||| |||||||||||    
T  9113720 tttggacgtcaacgttgcagatccggaag 9113692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 11977122 - 11976902
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||||| ||| || ||||||||||| |||||||||||| | ||||  ||||||||||||||  ||| | |||||| |||||| ||||    
T  11977122 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttttgtgatttcgtcgtctaagtgtggcgttgtattgttcgtcgt 11977023  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    |||||||| |   |||||||||||||| |||| | ||||||| |||  ||  |||||| ||||| || ||| ||||| ||| ||||||   |||||||||    
T  11977022 cttgtacgac---gtttgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggcatcagtcaattacaaattcaaccaatgatttgg 11976926  T
Q  379 acgccaatgttgtagatccggaag 402  Q
    |||  || |||| ||||| |||||    
T  11976925 acgtgaacgttgaagatctggaag 11976902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 166 - 402
Target Start/End: Original strand, 38007245 - 38007479
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgt-gtattttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    ||||||| | ||| |||||||| |||||||||| ||| || | ||||||||| |||| |||| | || ||||  ||||||||||||||  || |||| ||    
T  38007245 tctttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttgtttttttgtttttttgtgatttcgtcgtctaagtacgacatt 38007344  T
Q  265 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 364  Q
    ||| ||||||||||||||| |||||||   |||||||| ||||||| | ||||||| |||  ||  |||||||||||| || ||| ||||| ||| |||     
T  38007345 gtgctgttcatcgtcttgtgcggcgtt---tgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattt 38007441  T
Q  365 aattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||   |||||||||||| ||| |||| |||||||||||    
T  38007442 aaccaatgatttggacgtcaacgttgaagatccggaag 38007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 8985132 - 8985062
Alignment:
Q  167 cttttttcatttcctttcaatctaaa-taagtgatttccatatatatcaagtgttttcttttgtgtatttt 236  Q
    |||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  8985132 ctttttccattttctttcaatctaaaataagtgatttccacatatatcaagtgttttcttttgtgtttttt 8985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 8096683 - 8096590
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||||| |||   ||||||| ||||||  ||||| |||||||||||||    
T  8096683 ctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttgtgtgatttcatcgtctaagtgcggcgttgtgttgttc 8096590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 6216802 - 6216909
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||||||||||||||   |||| |||| |||||||| |||||    
T  6216802 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtc 6216900  T
Q  280 ttgtacggc 288  Q
    |||| ||||    
T  6216901 ttgtgcggc 6216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 31315934 - 31315994
Alignment:
Q  307 ttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||    
T  31315934 ttgttgtggtgtttgtttgattcatattgaaagatcagcttcaatcaataacatattcaat 31315994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 402
Target Start/End: Complemental strand, 31391938 - 31391720
Alignment:
Q  183 tcaatctaaataagtgatttccatatatatcaagtgttttcttttg--tgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||| ||| || || |||||||| ||| ||| ||  | | ||||  ||||||||||||||  ||||||||||||||||||| ||||||    
T  31391938 tcaatctaaataagtggttttcacatttatcaagtttttccttatgtatttttttttgtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtct 31391839  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||    ||||||||||| | |||| |  |||||| ||| |||  |||||||||||| || ||| ||||| ||| ||||||   ||||||||| |    
T  31391838 tgtgcggc---atttgatttcgcatcttgtcgcagtgtttgtttagtttttattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggc 31391742  T
Q  381 gccaatgttgtagatccggaag 402  Q
    | ||| |||| |||||| ||||    
T  31391741 gtcaacgttgcagatccagaag 31391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 26825334 - 26825469
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||  | |||||||| ||| ||||||||| |||   |||||||||| |||  ||||| ||||||||||||| || ||    
T  26825334 ctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgtttttg--tgatttcgtcttctaagtgcggcgttgtgttgttcgtcttc 26825431  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| ||||   ||||||||||||||||||| | |||||||    
T  26825432 ttgtgcggc---gtttgatttcgcgttttgtcgcggtgttt 26825469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 35850760 - 35850884
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| ||||   ||||||||||||||||| | | ||||||| |||  ||  ||||||||    
T  35850760 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaaa 35850856  T
Q  339 gatcagcttcaatcaatcacatattcaa 366  Q
    |||| || ||| ||||| ||| ||||||    
T  35850857 gatcggcatcagtcaattacaaattcaa 35850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 368
Target Start/End: Original strand, 31364469 - 31364558
Alignment:
Q  275 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaatt 368  Q
    |||||||||  |||||||||| ||||||    |||||| ||||||| ||||||| |||||||| |||||||| || ||||||||||||||||||    
T  31364469 tcgtcttgtgaggcgttgttttatttcg----ttgttgcggtgtttgtttggttcatattgaatgatcagctccagtcaatcacatattcaatt 31364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 341
Target Start/End: Complemental strand, 36344562 - 36344487
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| ||||||||||||||||  |||||| ||| |||||| ||||| || ||||||||||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 412
Target Start/End: Complemental strand, 11074085 - 11073857
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||| ||||||||||||||  || || || |||||||| ||| ||||||| | ||||  ||||||||| ||||  ||||  |||||| |||||| |||||    
T  11074085 cttttaatctaaataagtggctttcacatctatcaagtttttccttttgtattttttg-tgatttcgttgtctaagtgcagcgttgttttgttcgtcgtc 11073987  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   ||||||||||| |||| | ||||||| ||  |||  |||||||| |||  | ||||||||| ||| ||||||   ||||||||||    
T  11073986 ttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatcaattacaaattcaagcaatgatttgga 11073890  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||  ||||||| ||| | |||||||    
T  11073889 cgtcaacgttacagatccgaaagcatgggtatt 11073857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 364
Target Start/End: Original strand, 19120887 - 19120995
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaa 354  Q
    ||||| ||||||||||||| ||||||| |  ||| |||||||||||||||| |||||| ||||||| |||| ||  | ||| ||||||||||||| ||||    
T  19120887 gtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtcaa 19120985  T
Q  355 tcacatattc 364  Q
    | ||| ||||    
T  19120986 ttacaaattc 19120995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 34881726 - 34881803
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 34881803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  |||||||||  |||| || |||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 342
Target Start/End: Complemental strand, 7613160 - 7613053
Alignment:
Q  235 ttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatatt 334  Q
    |||||||||| ||| |||| ||| |  | |||||||||| ||||||||| |   ||||||||||||| ||| |||||| |||||| ||||| || |||||    
T  7613160 ttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatatt 7613061  T
Q  335 gaaagatc 342  Q
    ||||||||    
T  7613060 gaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 8984985 - 8984922
Alignment:
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||||||| | |||||||||||| |||| ||||||||||||| ||| |||| |||||||||||    
T  8984985 gatcagctttagtcaatcacatatacaatcgatgatttggacgacaacgttgcagatccggaag 8984922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 395
Target Start/End: Original strand, 13421917 - 13422047
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 361  Q
    |||||||||||| ||||||||| |||   | ||||||||||||| |||| || ||||| |||| |||  ||||||||||||  | ||| ||||| ||| |    
T  13421917 gttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcgacatcagtcaattacaaa 13422013  T
Q  362 ttcaattgatgatttggacgccaatgttgtagat 395  Q
    ||||||  ||||||||| || |||||||| ||||    
T  13422014 ttcaatcaatgatttgggcgtcaatgttgcagat 13422047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 16758521 - 16758636
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacata 361  Q
    ||||||||||| |||||| ||| |||  || |||||||||||||||||||  ||||||  ||||||| ||||||||| ||| |  ||| ||||||| | |    
T  16758521 gttgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgttacggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcataga 16758620  T
Q  362 ttcaattgatgatttg 377  Q
    ||||||  ||||||||    
T  16758621 ttcaatcaatgatttg 16758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 34945405 - 34945524
Alignment:
Q  293 tttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgta 392  Q
    |||||||||||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||||| ||| |||| |    
T  34945405 tttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 34945504  T
Q  393 gatccggaagtaggggtatt 412  Q
    |||||||||| | |||||||    
T  34945505 gatccggaagcatgggtatt 34945524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 313
Target Start/End: Complemental strand, 1582221 - 1582147
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgt 313  Q
    ||||||| |||| || |||||||||||||| |||  ||||||||| ||||||||||||||||  ||| |||||||    
T  1582221 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1582147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 1602594 - 1602668
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgt 313  Q
    ||||||| |||| || |||||||||||||| |||  ||||||||| ||||||||||||||||  ||| |||||||    
T  1602594 tgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 42886484 - 42886562
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||  ||||| ||||| || ||||| |||||||    
T  42886484 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatc 42886562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 14082567 - 14082448
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 267  Q
    ||||||| |||  ||||||||||||||||||  || || ||||||||||| ||||||| | |   ||||  ||||||| ||||||  ||| | |||||||    
T  14082567 ttttttccttttatttcaatctaaataagtggctttcacatatatcaagt-ttttcttatat---tttttgtgatttcatcgtctaagtgtggcgttgtg 14082472  T
Q  268 ttgttcatcgtcttgtacggcgtt 291  Q
    |||||| |||||||||||||||||    
T  14082471 ttgttcgtcgtcttgtacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 15571389 - 15571477
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgtt 269  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| |||||||  |||||  ||||||||||||||  ||| | |||||||||    
T  15571389 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgt-aatttttgtgatttcgtcgtctaagtgtggcgttgtgtt 15571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 412
Target Start/End: Original strand, 25980062 - 25980289
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||| ||||||||||| |||  | || |||| ||| ||| ||||||||  ||||  || |||||||||||  |||||   ||||||||||| ||||||    
T  25980062 tttcaacctaaataagtggttttaacatctatcgagtttttccttttgtggtttttg-tggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtct 25980160  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| |||||||   | ||||||||| |||| | ||||||| ||| |||  ||||||||||||| | ||| ||||  ||| ||||||   ||||||||| |    
T  25980161 tgtgcggcgtt---taatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaaattcaaccaatgatttgggc 25980257  T
Q  381 gccaatgttgtagatccggaagtaggggtatt 412  Q
    | ||| |||| |||| |||||| | |||||||    
T  25980258 gtcaaagttgcagattcggaagcatgggtatt 25980289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 2057909 - 2057833
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||  ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  2057909 tgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 41214714 - 41214646
Alignment:
Q  289 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatca 357  Q
    ||||||||||||||||| || ||   |||||| |||| || |||||||||||||||||| |||||||||    
T  41214714 gttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatca 41214646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 30298216 - 30298287
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| ||||||||| ||||| ||||||||||  ||| || ||| |||||||||||| || ||||||||    
T  30298216 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 7036131 - 7036181
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg 230  Q
    ||||||||||||||||||| ||| || ||||||||| | ||||||||||||    
T  7036131 ctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtg 7036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 26878264 - 26878195
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 252  Q
    ||||||||||||||||||| ||| || ||| ||||||| |||||||||||   ||||  ||||||||||||||    
T  26878264 ctttcaatctaaataagtggttttcacataaatcaagttttttcttttgt---tttttgtgatttcgtcgtct 26878195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 37986224 - 37986139
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    ||||| ||||||||||||||||||||||| ||||   |||||||||||| | |||||| || |||  |||| ||  |||||||||||||    
T  37986224 gtgcggcgttgtgttgttcatcgtcttgtgcggc---gtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatca 37986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 8985221 - 8985180
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggagggg 122  Q
    |||||||||||||||| |||||||||| ||||| ||||||||    
T  8985221 ttctctctaagttttcgttctctttcactcgtttaggagggg 8985180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 34945325 - 34945395
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtct 252  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||  ||||  ||||||||||||||    
T  34945325 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg--tttttgtgatttcgtcgtct 34945395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 38111055 - 38110974
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||||||  | ||||||| |||||||||||||||| | || ||||||  |||||| |||||||  |||||||| ||||    
T  38111055 gttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatca 38110974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 39567321 - 39567370
Alignment:
Q  332 attgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    ||||||||||||||||||  |||||||| |||||||  ||||||||||||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacg 39567370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 9591098 - 9591034
Alignment:
Q  233 ttttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttga 297  Q
    |||||||| |||| ||||||| ||  |  |||||||||||||| ||||||| |||||||||||||    
T  9591098 ttttcatggtttcctcgtctgagtatggtgttgtgttgttcattgtcttgtgcggcgttgtttga 9591034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 19259882 - 19259807
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||| ||||||||| ||| ||| ||  || |||||||||||| || |||||||||||||    
T  19259882 tgttgttcgtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtttatttgattcatattgaaagatc 19259807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 26578260 - 26578336
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| || |||||||||||||| ||| ||  ||  ||||| ||||| || |||||||||||||    
T  26578260 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 27266930 - 27266854
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||  ||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  27266930 tgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27266854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 27576421 - 27576345
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||  ||||| || |||||||||||||| ||| |||||| |||||| ||||  || |||||||||||||    
T  27576421 tgttgttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatc 27576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 41749211 - 41749295
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgt 250  Q
    |||||||||  || |||| |||||||||||||  ||| || ||||||||||| |||| ||||| |  ||||||||||||| ||||    
T  41749211 tcttttttccatttcttttaatctaaataagttgttttcacatatatcaagttttttattttgcgctttttcatgatttcatcgt 41749295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 43261890 - 43261818
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||| | ||| ||||||||||||  ||| || ||| |||||||||||| || |||||||||    
T  43261890 tgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaa 43261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 180 - 398
Target Start/End: Original strand, 22300768 - 22300987
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtg-tattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||||||| |||||||||||||| ||  ||||||||||| ||||||||||  | ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22300768 ctttcaatttaaataagtgattttcacgtatatcaagtgctttcttttgtacttttttcgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgt 22300867  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    ||||| |||||||||||||||||||||  ||||| ||||||| ||| | | || ||||||||||||||| | ||||||||| ||||||| ||||||||||    
T  22300868 cttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaatcacagattcaatcgatgatttgg 22300967  T
Q  379 acgccaatgttgtagatccg 398  Q
    ||||| | |||| |||||||    
T  22300968 acgccgacgttgcagatccg 22300987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 143 - 413
Target Start/End: Original strand, 52944198 - 52944464
Alignment:
Q  143 gatctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgat 242  Q
    |||||| ||||| || || ||||  ||||| | ||| ||||||||||||||||||||||| || |||||    |||||||||||||||  ||||| ||||    
T  52944198 gatctaaaatcatccctctgtatcatttttcccttttctttcaatctaaataagtgattttcacatata----gtgttttcttttgtgctttttcgtgat 52944293  T
Q  243 ttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||| ||||| ||||| ||||||||||||| |||| |||| ||||||||||| |||| |||| |||||| ||||||  |||| || |||||||||||||    
T  52944294 ttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T
Q  343 agcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    ||||||| ||||||||| ||||||| ||||||||||||| ||| |||| ||||||||||| | ||||||||    
T  52944394 agcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattc 52944464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 195 - 402
Target Start/End: Original strand, 28857339 - 28857544
Alignment:
Q  195 agtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtt 294  Q
    |||||||| || |||||||||||||||||||  |||| ||||  ||||||| ||||||  ||||| ||||||||||||| | ||||||| ||||||||||    
T  28857339 agtgattttcacatatatcaagtgttttctt--gtgtttttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtt 28857436  T
Q  295 tgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtaga 394  Q
    ||||| ||||| | |||| ||||||  |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||    
T  28857437 tgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacatattcaattgatgatttggacgccaacgtttcaga 28857536  T
Q  395 tccggaag 402  Q
    ||||||||    
T  28857537 tccggaag 28857544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 186 - 376
Target Start/End: Complemental strand, 51888396 - 51888204
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt--catgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  | ||||||||| ||||| ||||| ||||||||||||||||||||| |    
T  51888396 atctaaacaagtgattttcacatatatcaagtgttttcttttgtgttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttat 51888297  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgattt 376  Q
     || |||||||||||||||| | |||||| ||||||  ||||||| |||||||||||||| ||||||||||||||| ||| |||  |||||||    
T  51888296 gcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatcaatcacaaatttaatcaatgattt 51888204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 180 - 413
Target Start/End: Original strand, 9643304 - 9643541
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt----catgatttcgtcgtctgtgtgcgacgttgtgttgttcat 275  Q
    ||||| ||||||||||||||||| || |||||||| |||||||||||||||| |||     | | ||||||||||| | ||||||||||||||||||| |    
T  9643304 ctttcgatctaaataagtgattttcacatatatcatgtgttttcttttgtgtttttgttcccgtaatttcgtcgtccgagtgcgacgttgtgttgttcgt 9643403  T
Q  276 cgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    |||||||  || |||||||||||||| | | ||||||  |||||  ||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  9643404 cgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatcacatattcaattaatgatt 9643503  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
    || ||  ||||||| |||||||||||||| | ||||||    
T  9643504 tgaacatcaatgttatagatccggaagtatgagtattc 9643541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 146 - 402
Target Start/End: Complemental strand, 36204601 - 36204346
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 245  Q
    |||||||||||| || | ||| | ||| | ||| ||||| || ||||||||||||||||| ||| |||||||||||| |||        ||| |||||||    
T  36204601 ctagaatcacccctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaagtgttttttttc-------ttcgtgatttc 36204509  T
Q  246 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacgg-cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcag 344  Q
    |||||||  ||||| ||||||||||||| ||||| ||||||| |||||||||||||||| | |||||| |||||| |||||||| ||||||||| |||||    
T  36204508 gtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattgaaaaatcag 36204409  T
Q  345 cttcaatcaatcacat-----attcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||||| ||||||||||     |||||||  |||||||||||| ||| |||| |||||||||||    
T  36204408 cttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaag 36204346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 205 - 397
Target Start/End: Complemental strand, 33332735 - 33332541
Alignment:
Q  205 atatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcg 304  Q
    |||||||| |||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||  ||| ||||| || ||||||||||||||||     
T  33332735 atatatataaagctttttcttttgtgttttttcgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgca 33332636  T
Q  305 ttttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatcc 397  Q
    | |||||||  ||||||  ||| |||  ||||||||||||| |||||  |||||||| |||||||  |||||||||||| ||| |||| ||||||    
T  33332635 tcttgttgtgcggtgttcgtttcgtttttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 33332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 398
Target Start/End: Original strand, 36161603 - 36161849
Alignment:
Q  146 ctagaatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttc 245  Q
    ||||||||||||||| | ||| ||||  |||||| ||||||||||||||||||||||  | |||||||||   |||| |||||||| ||||  |||||||    
T  36161603 ctagaatcacccatctgcatt-ttttcccatttc-tttcaatctaaataagtgatttttacatatatcaa---tttttttttgtgtttttttgtgatttc 36161697  T
Q  246 gtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagc 345  Q
     ||||||| |||||  ||||| |||||| | ||||||| || |||||||||||||  |||||||||| ||||||  ||| ||| |||| ||||||| ||     
T  36161698 ttcgtctgagtgcgg-gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagt 36161796  T
Q  346 ttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccg 398  Q
    |||| |||||||||||||||||  |||||||||||||||| |||  |||||||    
T  36161797 ttcagtcaatcacatattcaatcaatgatttggacgccaacgttacagatccg 36161849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 166 - 402
Target Start/End: Complemental strand, 22039000 - 22038769
Alignment:
Q  166 tcttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatt-ttcatgatttcgtcgtctgtgtgcgacgtt 264  Q
    |||||||||  || ||||| ||||||||||||||||| || || |||||||| ||||||||||||| || ||| |||||| ||||| || |||     ||    
T  22039000 tcttttttccctttctttctatctaaataagtgattttcacatctatcaagttttttcttttgtgttttattcgtgattttgtcgt-tgagtg-----tt 22038907  T
Q  265 gtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 364  Q
    ||||||||| || | ||||  |||||||||||||||||||| ||||||||||| |  ||||||| |||||||||||||  ||||| ||||||||||||||    
T  22038906 gtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattc 22038807  T
Q  365 aattgatgatttggacgccaatgttgtagatccggaag 402  Q
    |||  ||||||| |||  |||||||| |||||| ||||    
T  22038806 aataaatgattttgacatcaatgttgcagatccagaag 22038769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 381
Target Start/End: Complemental strand, 48351367 - 48351174
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    ||||||| |||||||||||||||||  ||  ||||| ||||||| ||| | ||||| ||||| ||||||||| |||||| ||||||||||| ||||||||    
T  48351367 ttcaatccaaataagtgatttccatgcat--caagttttttcttgtgttt-ttttcgtgatt-cgtcgtctgagtgcgatgttgtgttgtttatcgtctt 48351272  T
Q  282 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    ||  ||  |||||||||||||||| ||||   ||||||  ||||||| |||||||||||||||||||| ||||||||||||||||   ||||||||||||    
T  48351271 gt--gggcttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacg 48351174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 9713831 - 9714054
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttc-ttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| | ||||||||||||| ||  |   |||||||||||  |||    
T  9713831 ctttcaatctaaataagtgatttccacatatatcaagttttttctttttgtgttttttctttatttcgtcgtctgagtaaggttttgtgttgttcgccgt 9713930  T
Q  279 cttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
    | ||| || |||||||||||||| | | |||||| || |||  |||  || |||||| |||||||||||||| |||||||| |||||||  | |||||||    
T  9713931 catgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatcagcttcaaacaatcacaaattcaatcaacgatttgg 9714030  T
Q  379 acgccaatgttgtagatccggaag 402  Q
     || ||| |||| ||||| |||||    
T  9714031 gcgtcaacgttgcagatctggaag 9714054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 234 - 377
Target Start/End: Original strand, 36194679 - 36194826
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 329  Q
    |||| ||||||||| ||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||| |  ||||||||  ||||||  |||||||     
T  36194679 tttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 36194778  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
     |||||||||||||||||||| |||||||| |||||||  ||||||||    
T  36194779 gtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttg 36194826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 22611107 - 22611325
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| | | ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  22611107 ctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 22611205  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||| ||||||||| | ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  22611206 ttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 22611302  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  22611303 cgtcaacgttgcagatccggaag 22611325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 223 - 402
Target Start/End: Complemental strand, 6155370 - 6155193
Alignment:
Q  223 cttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttat 322  Q
    ||||||||| ||||| ||||||||||||||| |||||  |||||||||| | || |||||| || ||||||||||||||| ||||||| |  |||||  |    
T  6155370 cttttgtgt-ttttcgtgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgt 6155273  T
Q  323 ttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    ||| || ||||||||||||||| |||| |||||||||| |||||| |||||||| ||||  || |||| |||||||||||    
T  6155272 ttgattcatattgaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaag 6155193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 180 - 401
Target Start/End: Original strand, 13634039 - 13634256
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  13634039 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 13634137  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   |||  ||| |||||||||| |||| | ||||||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   | ||||||||    
T  13634138 ttgt---gcgaggttagatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaacgatttgga 13634234  T
Q  380 cgccaatgttgtagatccggaa 401  Q
    || ||| |||| ||||||||||    
T  13634235 cgtcaacgttgcagatccggaa 13634256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 26633856 - 26633638
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  26633856 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 26633758  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||| |||   || ||||||| |||| |  |||||| ||  |||  ||||||||||||  | ||| || || ||| ||||||   ||||||||||    
T  26633757 ttgtgcggcattg---gacttcgcgtcttgtcgcagtgtttgttcagttcctattgaaagatctacatcagtcgattacaaattcaaccaatgatttgga 26633661  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || |||||||| |||||||||||    
T  26633660 cgtcaatgttgcagatccggaag 26633638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 401
Target Start/End: Original strand, 32766438 - 32766655
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||| |||||| ||| || || |||||||| ||| |||||  || ||||  ||||||||||||||  |||||  |||||||||||| |||||    
T  32766438 ctttcaatctaagtaagtgtttttcacatctatcaagtttttcctttttggttttttg-tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtc 32766536  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||||   |||||||||||||||| | ||||||| ||  |||  |||| |||||||  | ||| ||||| ||| |||||||  ||||||||||    
T  32766537 ttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctacatcagtcaattacaaattcaatcaatgatttgga 32766633  T
Q  380 cgccaatgttgtagatccggaa 401  Q
    || |||||||| ||||||||||    
T  32766634 cgtcaatgttgcagatccggaa 32766655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 397
Target Start/End: Complemental strand, 4142939 - 4142724
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| |||| | || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||| |||||    
T  4142939 ctttcaatctaaataagtgttttc-acatctatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtc 4142842  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| |||||  ||||||||||| ||||||| | ||||||| ||   ||  | ||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  4142841 ttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 4142742  T
Q  380 cgccaatgttgtagatcc 397  Q
    || ||| |||| ||||||    
T  4142741 cgtcaacgttgcagatcc 4142724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 396
Target Start/End: Original strand, 18048809 - 18049019
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| ||||||||||||||||| ||     |||||||||||||||||  |||| | ||||||||| || |  ||||  |||||||||||  |||||    
T  18048809 ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgctttttga-gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtc 18048902  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||  ||||||||||||||| |||  |||||| ||||||  |||| || |||||||||||| ||||||| ||||||| | ||||||| ||| |||| ||    
T  18048903 ttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatcgataattttga 18049002  T
Q  380 cgccaatgttgtagatc 396  Q
    |  |||||||| |||||    
T  18049003 catcaatgttgcagatc 18049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 21686426 - 21686209
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| || |||||||||| |||||    
T  21686426 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-tttttgtgatttcgtcgtctaagtgcggcg-tgtgttgttcgtcgtc 21686329  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||  | ||||||| ||  |||  ||||||||||||  | ||||||| | ||| ||||||   ||||||||||    
T  21686328 ttgtgcggc---gtttgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctacatcaatcagttacaaattcaagcaatgatttgga 21686232  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  21686231 cgtcaacgttgcagatccggaag 21686209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 412
Target Start/End: Original strand, 2520703 - 2520931
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgt--tgtgttgttcatcgtc 279  Q
    ||||||||||||||||| ||| || || |||||||| ||||||||||||| ||||  ||||||||||||||  |||||  ||  |||||||||| |||||    
T  2520703 ttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgt-tttttgtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtc 2520801  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | | ||||| ||   ||  ||||||||||||  | ||||||||| ||| ||| ||   ||||||||||    
T  2520802 ttgtgcggc---gtttgatttcgcgttttgtcgcgatgtttgttcaattcctattgaaagatctacatcaatcaattacaaattaaagcaatgatttgga 2520898  T
Q  380 cgccaatgttgtagatccggaagtaggggtatt 412  Q
    || ||| |||| ||||||||||| | |||||||    
T  2520899 cgtcaacgttgcagatccggaagcatgggtatt 2520931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 35348229 - 35348389
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatcg 277  Q
    ||||||||||||||||||| ||| || | ||||||||| ||||||||||||| ||||  ||  ||||||||||||  ||||| ||||||||||||| |||    
T  35348229 ctttcaatctaaataagtggttttcacaaatatcaagt-ttttcttttgtgtttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcg 35348327  T
Q  278 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||| ||||   |||||||||||  | |||||||||||||  ||| |||| ||||||||||||    
T  35348328 tcttgtgcggc---gtttgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatc 35348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 378
Target Start/End: Original strand, 27651914 - 27652062
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggtta 329  Q
    |||| ||||||||||||||  |||| |||||||||||||| ||||||||| ||| ||||||||||||||| |  ||||||||  ||||||  |||||||     
T  27651914 tttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttc 27652013  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
     ||||||||||||||||| |  |||||||| |||||||  |||||||||    
T  27652014 gtattgaaagatcagctttagacaatcacaaattcaatcaatgatttgg 27652062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 199 - 312
Target Start/End: Complemental strand, 42032691 - 42032578
Alignment:
Q  199 atttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgat 298  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||  | ||||| |||| | ||||| |||||||||| ||  ||||||||||    
T  42032691 atttccatatatatcaagtcttttcttttgtgttttttcgtgatttcttcgttcgagtgcggcgttattttgttaatcgtcttgtgcgatgttgtttgat 42032592  T
Q  299 ttcgcgttttgttg 312  Q
    ||||||| ||||||    
T  42032591 ttcgcgtcttgttg 42032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 381
Target Start/End: Complemental strand, 52934072 - 52933931
Alignment:
Q  241 atttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgttta-tttggttaatattgaaag 339  Q
    ||||| ||||||| ||||| ||||||||||||| || | |||| | ||||||||||||||||| | |||||| |||| ||| |||| || ||||||||||    
T  52934072 atttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaag 52933973  T
Q  340 atcagcttcaatcaatcacatattcaattgatgatttggacg 381  Q
    ||||||||||||| |||| | |||||||  || |||||||||    
T  52933972 atcagcttcaatcgatcaaagattcaatcaataatttggacg 52933931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 402
Target Start/End: Original strand, 53444100 - 53444260
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||  || |||||||||||||||| ||||||||| |||   | |||||||||||||||||| | ||||||| |||  ||  ||||||||    
T  53444100 tgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaa 53444196  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
    |||| || ||| ||||| ||| ||||||   ||||||||| || |||||||| |||||||||||    
T  53444197 gatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaag 53444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 43853437 - 43853521
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaag 339  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||| |||| | |||||||| ||||||||||    
T  43853437 gtgcgacattgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 366
Target Start/End: Complemental strand, 31891441 - 31891290
Alignment:
Q  219 ttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--g 314  Q
    |||||||| |||| ||||| ||||||||||||||  ||||||||||||||||||| |||||||||   ||||||||||||||||| |   |||||||  |    
T  31891441 ttttctttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcg 31891342  T
Q  315 gtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaa 366  Q
    |||||  |||||||  |||||||| ||||| ||||  |||||||| ||||||    
T  31891341 gtgttcgtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaa 31891290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 53810952 - 53811170
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||||||| || || ||||||||  || ||||||||| ||||  | |||||||| |||   |||| |||| |||||||| |||||    
T  53810952 ctttcaatttaaataagtgattttcacatctatcaagttattccttttgtgt-tttttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtc 53811050  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||||||||||| | || |||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  53811051 ttgtgcggc---gtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 53811147  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| |||||||||||    
T  53811148 cgtcaacgttgcagatccggaag 53811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 400
Target Start/End: Complemental strand, 38166430 - 38166199
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttctt----ttgtgtattttcatgatttcgtcgtctgtgtgcgacgt 263  Q
    |||||||  |||||||| ||||||| ||||||||| || |||||||||||||| ||||    || | | ||||  ||||||||||||||| ||||| |||    
T  38166430 ttttttccattcctttcgatctaaacaagtgattttcacatatatcaagtgttgtcttctggttttttttttttgtgatttcgtcgtctgagtgcggcgt 38166331  T
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatatt 363  Q
    |||||||||| | |||||     ||| ||||||||||| | | || ||||||||||| |||| || |||||||||||||| ||| | | ||||| | |||    
T  38166330 tgtgttgttcgttgtctt----tgcgctgtttgatttcacatcttattgtggtgtttgtttgatttatattgaaagatcaactt-agttaatcatagatt 38166236  T
Q  364 caattgatgatttggacgccaatgttgtagatccgga 400  Q
    |||   |||||||||||  ||| |||| |||||||||    
T  38166235 caagcaatgatttggacatcaacgttgcagatccgga 38166199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||||| ||||||||| |||||| |||||||||| ||| |||||| |||||||||||| || ||||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 402
Target Start/End: Complemental strand, 19853693 - 19853479
Alignment:
Q  184 caatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||||||| ||| || || |||||||| ||||||||| ||| ||||  ||||||||||||||  ||||| ||||||||||||| ||||||| |    
T  19853693 caatctaaataagtggttttcacatctatcaagttttttcttttttgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttat 19853595  T
Q  284 acggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgcc 383  Q
      |||    |||||||| ||||||| |   ||||||| ||  |||  ||||||||||||  | ||| ||||| ||| ||||||   |||||||||||| |    
T  19853594 gtggc---atttgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctacatcactcaattacaaattcaaccaatgatttggacgtc 19853498  T
Q  384 aatgttgtagatccggaag 402  Q
    || |||| |||||||||||    
T  19853497 aacgttgcagatccggaag 19853479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 47158139 - 47158207
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtatttt 236  Q
    |||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  47158139 ttttttcactttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgtttttt 47158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 378
Target Start/End: Complemental strand, 1621619 - 1621495
Alignment:
Q  255 gtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgtg--gtgtttatttggttaatattgaaagatcagcttcaa 350  Q
    ||||||||||||||||| | |||||||||   ||||||||||||||||| |  |||||||||  |||||  |||||||  ||||||||||||||||||||    
T  1621619 gtgcgacgttgtgttgtccgtcgtcttgt---gcgttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcaa 1621523  T
Q  351 tcaatcacatattcaattgatgatttgg 378  Q
     |||||| | |||||||  |||||||||    
T  1621522 acaatcataaattcaatcaatgatttgg 1621495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 401
Target Start/End: Complemental strand, 24099255 - 24099035
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc--atgatttcgtcgtctgtgtgcgacgttgtgttgttcatcg 277  Q
    ||||||||||||||||||||||| || || ||||||||  |   |||||| | ||||   |||||||||||||||  ||||| | || |||||||| |||    
T  24099255 ctttcaatctaaataagtgattttcacatctatcaagttgtccattttgtatttttttgtatgatttcgtcgtctaagtgcggcattttgttgttcgtcg 24099156  T
Q  278 tcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttg 377  Q
    |||||| ||||| |   ||||||||||| |||| | || |||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||    
T  24099155 tcttgtgcggcgat---tgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttg 24099059  T
Q  378 gacgccaatgttgtagatccggaa 401  Q
    |||| ||| |||| ||||||||||    
T  24099058 gacgtcaacgttgcagatccggaa 24099035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 31359950 - 31359749
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttg 265  Q
    ||||| ||||| |||||||||||||||| | ||||||| || |||||||| ||||||| ||| | || ||  |  |||||||  |||| ||| |  ||||    
T  31359950 tttttccattttctttcaatctaaataaattatttccacatttatcaagttttttcttgtgttttttctctcgcaatttcgtaatctgagtgtggtgttg 31359851  T
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattca 365  Q
    |||| ||| ||||||||| || |||||| ||||||| ||| ||||||  ||||||  ||||||  |||| |||||||| ||| | ||||||||| |||||    
T  31359850 tgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaatcacagattca 31359751  T
Q  366 at 367  Q
    ||    
T  31359750 at 31359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 868180 - 868257
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||||| ||| || ||| |||||| ||||| || ||||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca 868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 29120547 - 29120413
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||| ||| || |||||||   | |||  |||||||| ||||  ||||||||||||||  ||||| || |||||||||||||||||    
T  29120547 tttcaatctaaataagtggttttcacatatatccgatttttctttttgtgttttttg-tgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtct 29120449  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtt 319  Q
    |||||| |   |||||||||||||| ||||  |||||||    
T  29120448 tgtacgac---gtttgatttcgcgtcttgtcatggtgtt 29120413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 33920984 - 33921067
Alignment:
Q  189 taaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    |||||||||||||| || ||||||||||| ||||||||||||  ||||  ||||||||||||||  ||||| |||||||||||||    
T  33920984 taaataagtgattttcacatatatcaagttttttcttttgtg-ctttttgtgatttcgtcgtctaagtgcggcgttgtgttgttc 33921067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 4937757 - 4937922
Alignment:
Q  182 ttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtctt 281  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||| ||| |||   ||||||| ||||||| || ||||||||| ||||   |||| |     
T  4937757 ttcaatctaaataagtgattttcatatatattaagttttttcttttttgt-tttgtgtgatttcttcgtctgagtacgacgttgtcttgtatgtcgt-ta 4937854  T
Q  282 gtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca 349  Q
    || ||||||||||||||||  | | |||||| || |||  |||| ||  ||||||||||||| |||||    
T  4937855 gtgcggcgttgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttca 4937922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 29961109 - 29961002
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||||||||||||||||| || || |||||||| ||| ||||||||| ||||  | ||||| ||||||  ||| |  |||||||||||| ||||||    
T  29961109 tttcaatctaaataagtgattttcacatctatcaagtttttccttttgtgttttttttttatttcatcgtctaagtgtggggttgtgttgttcgtcgtct 29961010  T
Q  281 tgtacggc 288  Q
    ||| ||||    
T  29961009 tgtgcggc 29961002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 37683878 - 37683949
Alignment:
Q  248 cgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtt 319  Q
    |||||| ||||| |||||||||||||||||||||||   | ||||||||||||||||| |||||| ||||||    
T  37683878 cgtctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgtt 37683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 44596588 - 44596698
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||  ||||| || ||||| ||||| |||| |||||||||||||  ||||||| ||||||  ||| |||||||| |||||| |||||    
T  44596588 ctttcaatttaaataaccgattttcacatataacaagttttttgttttgtgtatttt-gtgatttcctcgtctaagtgtgacgttgtattgttcgtcgtc 44596686  T
Q  280 ttgtacggcgtt 291  Q
    |||| |||||||    
T  44596687 ttgtgcggcgtt 44596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 47320581 - 47320460
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcat-------gatttcgtcgtctgtgtgcgacgttgtgttgttcatcgt 278  Q
    ||||||||||||||||| || | |||||||| |||||||||||||| ||||  |       |||||||||||||  ||  ||| ||||||||||| ||||    
T  47320581 atctaaataagtgattttcacaaatatcaagcgttttcttttgtgttttttttttttttgtgatttcgtcgtctaagtaagaccttgtgttgttcgtcgt 47320482  T
Q  279 cttgtacggcgttgtttgattt 300  Q
    ||||| ||||||||||||||||    
T  47320481 cttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 35395861 - 35395741
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaa-gtgttttcttttgtgtattttcatg--atttcgtcgtctgtgtgcgacgttgtgttgttcatc 276  Q
    |||| ||| |||||||||||||| ||| || ||||| ||||| |||| ||| ||||||  ||  ||||||||||||| ||||| ||||||||||||| ||    
T  35395861 cttttaatgtaaataagtgattttcatgtacatcaaagtgttctcttatgt-tattttgttgtaatttcgtcgtctgagtgcggcgttgtgttgttcgtc 35395763  T
Q  277 gtcttgtacggcgttgtttgat 298  Q
    ||||||| || |||||||||||    
T  35395762 gtcttgttcgacgttgtttgat 35395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 412
Target Start/End: Complemental strand, 17949508 - 17949281
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||  ||||||||| ||| || | ||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||  |||| |    
T  17949508 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgt 17949410  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||   ||||||||| ||||||||| | ||||||  |||  ||  ||||||||||||  | ||| ||||| ||| ||||||   |||||| |  |    
T  17949409 tgtgcggc---gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaattacaaattcaaccaatgattggagc 17949313  T
Q  381 gccaatgttgtagatccggaagtaggggtatt 412  Q
    | ||| |||| ||||||||||| | |||||||    
T  17949312 gtcaacgttgcagatccggaagaatgggtatt 17949281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 412
Target Start/End: Complemental strand, 17953360 - 17953133
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    |||||||  ||||||||| ||| || | ||||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| ||||||||||||  |||| |    
T  17953360 tttcaatagaaataagtggttttcacacatatcaagtttttccttttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgt 17953262  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    ||| ||||   ||||||||| ||||||||| | ||||||  |||  ||  ||||||||||||  | ||| ||||| ||| ||||||   |||||| |  |    
T  17953261 tgtgcggc---gtttgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctacatcagtcaattacaaattcaaccaatgattggagc 17953165  T
Q  381 gccaatgttgtagatccggaagtaggggtatt 412  Q
    | ||| |||| ||||||||||| | |||||||    
T  17953164 gtcaacgttgcagatccggaagaatgggtatt 17953133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 342
Target Start/End: Original strand, 44947441 - 44947506
Alignment:
Q  277 gtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||||| ||||| ||||||||||||||||    
T  44947441 gtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatc 44947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 53616721 - 53616644
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 398
Target Start/End: Original strand, 54021785 - 54021998
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||| ||| ||| ||||||||  ||||  ||||||||| ||||   |||| | ||||||||||  |||||    
T  54021785 ctttcaatctaaataagtggttttcacatatatccagtttttccttttgtg--tttttgtgatttcgttgtctaattgcggcattgtgttgttagtcgtc 54021882  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   ||||||||||| || |||| | ||||||  ||| |||  ||||||||||||  | ||| ||||| ||| ||| |||  ||||||||||    
T  54021883 ttgtgcggc---gtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattgaatcaatgatttgga 54021979  T
Q  380 cgccaatgttgtagatccg 398  Q
     | ||| |||| |||||||    
T  54021980 tgtcaacgttgcagatccg 54021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 22558649 - 22558548
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||  ||||||  ||||| | || ||||||||||||||    
T  22558649 ctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtg--tttttgtgattttatcgtctaagtgcggcattttgttgttcatcgtc 22558552  T
Q  280 ttgt 283  Q
    ||||    
T  22558551 ttgt 22558548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 380
Target Start/End: Original strand, 37030187 - 37030381
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| ||||||| |||||| || | ||||||||| |||    |||||| ||||  |||||||||| |||| || || ||||||||||||| |||||    
T  37030187 ctttcaatttaaataaatgattttcacacatatcaagttttta---ttgtgtctttttgtgatttcgtcatctgagtacggcgttgtgttgttcgtcgtc 37030283  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||| ||||||   |||||||  || |||| | |||||   |||||||  |||  |||||||| ||||||||||  ||| |||||||  ||||||||||    
T  37030284 ttgtatggcgtt---tgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaatacagattcaatcaatgatttgga 37030380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 52978749 - 52978839
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttc 273  Q
    |||||||||||||||||||||| || ||||||||||| ||||| |||| || ||||  |||||||| |||||  ||||| |||||||||||||    
T  52978749 tttcaatctaaataagtgattttcacatatatcaagt-ttttcctttgggt-tttttgtgatttcggcgtctaagtgcggcgttgtgttgttc 52978839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 5119263 - 5119373
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||||| |||   ||||||||||||||  |||||   ||||||||||| | |||    
T  5119263 ctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-tttgtgtgatttcgtcgtctaagtgcggtattgtgttgttcgttgtc 5119361  T
Q  280 ttgtacggcgtt 291  Q
    || | |||||||    
T  5119362 ttttgcggcgtt 5119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 21090170 - 21090241
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| |||||||||||| |||||||||||||  |||||| ||| |||||| ||||| || ||||||||    
T  21090170 tgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 29965653 - 29965728
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || ||||||||||||    
T  29965653 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 51318003 - 51318078
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| |||| |||||||||||| ||| || ||| |||||| ||||| || ||||||||||||    
T  51318003 tgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagat 51318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 367
Target Start/End: Complemental strand, 12199820 - 12199695
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||| ||| | |||||||||||||||||| |||| | ||    |||||||| |||| |||||| ||||||  ||| ||| |||||||||    
T  12199820 tgatttcgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagc---ttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaa 12199724  T
Q  339 gatcagcttcaatcaatcacatattcaat 367  Q
     |||| ||||| ||| | ||| |||||||    
T  12199723 tatcaacttcagtcagttacagattcaat 12199695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 35965048 - 35964970
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||| |||  |||||||||||||||| ||| || |||||||||| ||||| || ||||| |||||||    
T  35965048 tgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagatc 35964970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 343
Target Start/End: Original strand, 7393217 - 7393354
Alignment:
Q  207 atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggc-gttgtttgatttcgcgt 305  Q
    |||||||||||  |||||||| ||| ||||| ||||||||||||  | ||||   ||||||||| || ||||||||| || |  |||||||||||| | |    
T  7393217 atatatcaagttgtttcttttatgttttttcgtgatttcgtcgttcgagtgcagtgttgtgttgctcgtcgtcttgttcgacatttgtttgatttcacat 7393316  T
Q  306 tttgttgtggtgtttatttggttaatattgaaagatca 343  Q
     |||||||||||||  |||| ||  |||||||||||||    
T  7393317 cttgttgtggtgttcgtttgattcctattgaaagatca 7393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 12265473 - 12265549
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatca 343  Q
    |||||||| |||||| || ||||||||||||||||| ||| | ||||||||||| | ||| || ||||||||||||||    
T  12265473 tgttgttcgtcgtct-gtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatca 12265549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 378
Target Start/End: Original strand, 18935777 - 18935900
Alignment:
Q  259 gacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgt--tttgttgt--ggtgtttatttggttaatattgaaagatcagcttcaatcaa 354  Q
    ||||||||| ||||| ||||||||| | ||||||||||||||| | |  ||||||||  ||||||  |||||||  ||||||||||| | |||||  |||    
T  18935777 gacgttgtgctgttcgtcgtcttgtgcagcgttgtttgatttcacatcctttgttgtgcggtgttcgtttggttcgtattgaaagattaacttcagacaa 18935876  T
Q  355 tcacatattcaattgatgatttgg 378  Q
    ||| | |||||||| |||||||||    
T  18935877 tcaaaaattcaattaatgatttgg 18935900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 49072852 - 49072811
Alignment:
Q  242 tttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  49072852 tttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcttgt 49072811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 9528948 - 9528872
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||| ||| ||  || | |||| ||||| || |||||||||||||    
T  9528948 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatc 9528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 10359618 - 10359542
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||||||  |||||| | ||| ||||||||||||| ||| || |||||||||| ||||| || |||||||||||||    
T  10359618 tgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaaagatc 10359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    |||||||| ||||||||| ||||||||||||||||  ||| || ||| |||||| ||||| || |||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 11300150 - 11300074
Alignment:
Q  207 atatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||| ||||| ||||| | ||||  ||||||||||||||  |||||  |||||||||||| |||||||||    
T  11300150 atatatcaagttttttcgtttgtatgtttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgt 11300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 37465511 - 37465603
Alignment:
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
    |||||||||||||| ||| || || |||||||  ||||||| | |||||||||||| ||||  |||||| ||||||||||  || ||||||||    
T  37465511 cgttgtttgatttcacgtcttcttttggtgttcgtttggttcacattgaaagatcatcttcggtcaatcgcatattcaatcaataatttggac 37465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 43510123 - 43510257
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||||||||||||||  || || || |||||||| ||| |||| ||   ||||  ||||||||||||||  ||||| ||||||||| ||  |||||    
T  43510123 ctttcaatctaaataagtggctttcacatttatcaagtttttcctttcgt---tttttgtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtc 43510219  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgttt 320  Q
    |||| ||||   ||||||||||| ||||||| | |||||||    
T  43510220 ttgtgcggc---gtttgatttcgtgttttgtcgcggtgttt 43510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 49410241 - 49410317
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| | ||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  49410241 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 49410317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 56040829 - 56040721
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| |||| | |||||| |||   |||||||||||| |  ||||| |||| |||||||| |||||    
T  56040829 ctttcaatctaaataagtggttttcacatctatcaagtttttt-tcttgtgtttttg--tgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtc 56040733  T
Q  280 ttgtacggcgtt 291  Q
    |||| |||||||    
T  56040732 ttgtgcggcgtt 56040721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Complemental strand, 2069661 - 2069582
Alignment:
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    |||||||||||||||| | |||||| ||| || |||||||| ||||||||| ||||| || | ||||||| | |||||||    
T  2069661 cgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaat 2069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 9634598 - 9634645
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttctttt 227  Q
    ||||| ||||||||||||||||| || |||||||| ||||||||||||    
T  9634598 ctttcgatctaaataagtgattttcacatatatcatgtgttttctttt 9634645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 28857272 - 28857327
Alignment:
Q  150 aatcacccatccgtattcttttttcatttcctttcaatctaaataagtgatttcca 205  Q
    ||||||||||| |||| ||||||   ||||||||||||| ||||||||||||||||    
T  28857272 aatcacccatctgtatcctttttctctttcctttcaatccaaataagtgatttcca 28857327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 50766574 - 50766507
Alignment:
Q  275 tcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    ||||||||| ||||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  50766574 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 50766507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||| ||||||||||||||||  | | ||||||  ||||| ||||| ||  ||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||| ||||||||||||||||  | | ||||||  ||||| ||||| ||  ||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 14121784 - 14121900
Alignment:
Q  186 atctaaataagtgatttccatatatatcaagtgttttct--tttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgt 283  Q
    ||||||||||||||||| || ||||| ||||| ||||||  | ||| | ||||| |||||||||||||||   ||| | ||||  ||||| | |||||||    
T  14121784 atctaaataagtgattttcacatataacaagttttttcttctatgttttttttcttgatttcgtcgtctgacggcggcattgtaatgttcgtagtcttgt 14121883  T
Q  284 acggcgttgtttgattt 300  Q
    | | |||||||||||||    
T  14121884 atgacgttgtttgattt 14121900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 21365193 - 21365089
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  21365193 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 21365095  T
Q  339 gatcag 344  Q
    ||||||    
T  21365094 gatcag 21365089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 37188739 - 37188694
Alignment:
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttt 226  Q
    |||||||||||||||||||||| || ||||||| ||| ||||||||    
T  37188739 tttcaatctaaataagtgattttcacatatatctagttttttcttt 37188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 40066240 - 40066140
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || |||| | |||| ||| ||||||||| || |  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  40066240 ctttcaatataaataagtggttttcacatattttaagtttttccttttgtgttttatg-tgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtc 40066142  T
Q  280 tt 281  Q
    ||    
T  40066141 tt 40066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 9283929 - 9284005
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||  |||||||||  |||||||||||||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  9283929 tgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 9645622 - 9645586
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgattt 300  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  9645622 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 9645586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 394
Target Start/End: Original strand, 22806588 - 22806676
Alignment:
Q  306 tttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtaga 394  Q
    ||||||||||||||  |||||||  | |||||| ||| | |||||||||| | | |||||||  |||||||||||  ||||||||||||    
T  22806588 tttgttgtggtgttcttttggttccttttgaaatatcggattcaatcaattatagattcaatcaatgatttggacatcaatgttgtaga 22806676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 33332788 - 33332756
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatat 212  Q
    |||| ||||||||||||||||||||||||||||    
T  33332788 cttttaatctaaataagtgatttccatatatat 33332756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 38706781 - 38706705
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| | ||||||||| ||||| ||| ||  || |||||| ||||| || |||||||||||||    
T  38706781 tgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaaagatc 38706705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| ||||||||||||||||  ||| |   || |||||| ||||| || |||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 56194619 - 56194695
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || ||| |||||| ||||  ||  ||||||||||||    
T  56194619 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatc 56194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 81 - 402
Target Start/End: Complemental strand, 58363 - 58055
Alignment:
Q  81 ttctctctaagttttctttctctttcagtcgttgaggaggggcagttttagatcannnnnnngatctagaatcacccatccgtattcttttttcatttcc 180  Q
    |||||||||||||||| || ||||||| |||| |||||||||  ||||||| |||       || ||| |||||||| || | || |||||||| ||| |    
T  58363 ttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcatttttt-gacctaaaatcacccctctgcatccttttttccttttc 58265  T
Q  181 tttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtct 280  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||| ||||||| ||||| ||||||||||||            
T  58264 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgatttcatcgtctgagtgcggcgttgtgttgtt-------- 58173  T
Q  281 tgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggac 380  Q
        || |||| |||||||| |||| |||||| ||||||| |||| || ||| |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  58172 ----cgtcgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggac 58077  T
Q  381 gccaatgttgtagatccggaag 402  Q
    | |||  ||| |||||||||||    
T  58076 gtcaacattgcagatccggaag 58055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 239 - 402
Target Start/End: Original strand, 5989 - 6152
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||| |||| | | |||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||| |||||||| |||||||||    
T  5989 tgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T
Q  339 gatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccggaag 402  Q
      | | ||||| |||||||||||||||||  |||||||||| | |||||||| |||||||||||    
T  6089 tgttaacttcagtcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaag 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 180 - 413
Target Start/End: Original strand, 93003 - 93240
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttc---atgatttcgtcgtctgtgtgcgacgttgtgttgttcatc 276  Q
    ||||||||||||||||||||||| |   |||||||||| |||||||| || | |||||   |||||||||||||||| ||||  ||||||||||||  |     
T  93003 ctttcaatctaaataagtgatttacgcttatatcaagttttttctttcgttttttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgtt 93102  T
Q  277 gtcttgtacggcgttgtttgat-ttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatt 375  Q
    ||||||| |||||||||||||| |||| || |||||||||||||  ||||||| ||||||||||||| | |||| ||||||||||||| |||  ||||||    
T  93103 gtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatcggtttcactcaatcacatattgaatcaatgatt 93202  T
Q  376 tggacgccaatgttgtagatccggaagtaggggtattc 413  Q
     ||||| ||| |||| |||||| ||| || ||||||||    
T  93203 aggacgtcaacgttgcagatccagaaatatgggtattc 93240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 201 - 413
Target Start/End: Complemental strand, 92664 - 92452
Alignment:
Q  201 ttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgattt 300  Q
    ||||| |||||||| | ||||  |||| ||| ||||  ||||||||||||||| ||| |  ||||||||| ||| |||||||| ||  ||||||||||||    
T  92664 ttccacatatatcaggcgtttcattttatgtttttttgtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgattt 92565  T
Q  301 cgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttgtagatccgga 400  Q
    | ||| |||||||||||||  ||||||| ||||||||||||||  || | | ||||||| |||||||  |||||||||||| ||| ||||||||||| ||    
T  92564 cacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgtagatccaga 92465  T
Q  401 agtaggggtattc 413  Q
    || | ||||||||    
T  92464 agcatgggtattc 92452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 32933 - 32714
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||  ||||||||||||||  ||||| |||| |||||||| |||||    
T  32933 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtc 32834  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||   |||||||||||||| |||| | ||| ||| ||  |||  ||||||||||||  | ||||||||| ||| ||||||   ||||||||||    
T  32833 ttgtgcggc---gtttgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgga 32737  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || ||| |||| ||||| |||||    
T  32736 cgtcaacgttgcagatctggaag 32714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 234 - 378
Target Start/End: Complemental strand, 1817 - 1669
Alignment:
Q  234 tttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgc--gttttgttgtg--gtgtttatttggtta 329  Q
    |||| ||||||||||||||  |||||||||| |||||||| ||||||||| |||||||||||||||||||   ||||||||||  |||||  |||||||     
T  1817 tttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgatttcgcatcttttgttgtgtagtgttcgtttggttc 1718  T
Q  330 atattgaaagatcagcttcaatcaatcacatattcaattgatgatttgg 378  Q
     ||||||||||||| |||||  |||||||| |||||||  |||||||||    
T  1717 gtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgg 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 364
Target Start/End: Original strand, 1247 - 1428
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||| |||||||||||| ||| || ||||||||||| || |||||||||| ||||  ||||||| ||||||  ||||| ||||||||||||| |||||    
T  1247 ctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgtttttttgtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtc 1346  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattc 364  Q
    ||||  |||   |||||||||||||| |||||| ||||||  ||| |||  |||||||||||| || ||| ||||| ||| ||||    
T  1347 ttgtgtggc---gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtcaattacaaattc 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 15395 - 15614
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| ||||| | |||||| ||| ||||||||| ||||  |||||||||| |||  |||||  |||||||||||| |||||    
T  15395 ctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtgt-tttttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtc 15493  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    |||| ||||||  ||||||||||||| |||| | ||||||| ||   ||  ||||||||||||  | ||| ||||| ||| ||||||   ||||||||||    
T  15494 ttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttgga 15591  T
Q  380 cgccaatgttgtagatccggaag 402  Q
    || |||  ||| |||||||||||    
T  15592 cgtcaacattgcagatccggaag 15614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 10238 - 10069
Alignment:
Q  168 ttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtg 267  Q
    ||||||| ||| ||||| ||||||||||||| ||| || ||||||||||| ||| ||||||||  ||||  ||||||||||||||  ||||| | ||||     
T  10238 ttttttcgttttctttccatctaaataagtggttttcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcgtctaagtgcggctttgtt 10141  T
Q  268 ttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||| ||||||||| ||||   |||||||||||||| |||| | |||||| ||||  ||  ||||||||||||    
T  10140 ttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 37950 - 38040
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 272  Q
    ||||||||||||||||||| ||| || |||| |||||| ||| ||||||||| ||||  | |||||||| |||  ||||| | ||||||||||    
T  37950 ctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgtttttt--ttatttcgtcatctaagtgcggcattgtgttgtt 38040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 402
Target Start/End: Complemental strand, 72049 - 71831
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||| ||||||||| ||| || || |||||||| ||| | ||||||| ||||  ||||||||||||||  ||||| ||||||||||||| | |||    
T  72049 ctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtgttttttg-tgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtc 71951  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttgga 379  Q
    ||||   |||  |||||||||| |||||||| | ||||||| ||  |||  ||||||||||||  | | | ||||| ||| ||||||   ||||||||||    
T  71950 ttgt---gcggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctacattagtcaattacaaattcaaccaatgatttgga 71854  T
Q  380 cgccaatgttgtagatccggaag 402  Q
     | ||| ||||||||||||||||    
T  71853 tgtcaacgttgtagatccggaag 71831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 50690 - 50781
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgtt 272  Q
    ||||||||||||||||||| ||| || || |||||||| ||| ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  50690 ctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgt-ttttcgtgatttcgtcgtctaagtgcggcgttgtgttgtt 50781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 36762 - 36683
Alignment:
Q  262 gttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||||||| ||||||||| ||| |||||||||||||   | ||||||||||| |||||||||| ||||||||||||    
T  36762 gttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 6311 - 6387
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||| |||||||||||||| |||||||||||| ||| || ||| |||||| ||||| || |||||||||||||    
T  6311 tgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 7619 - 7722
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    |||||||| |||||||||| ||| || ||||||||||| ||| ||||||||| ||||  ||| || ||| |||| ||||| ||||||||||||  |||||    
T  7619 ctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtgtttttttgtgaatttgtcatctgagtgcggcgttgtgttgtttgtcgtc 7718  T
Q  280 ttgt 283  Q
    ||||    
T  7719 ttgt 7722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 9396 - 9474
Alignment:
Q  289 gttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttcaatcaatcacatattcaat 367  Q
    ||||||||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| | ||||| |||||||||||    
T  9396 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaat 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 2156 - 2000
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtc 279  Q
    ||||||||||||||||||| ||| || || |||||||| ||||||||||||  ||||  ||||||| ||||||  ||||| | || |||||||| |||||    
T  2156 ctttcaatctaaataagtggttt-cacatctatcaagttttttcttttgtg--tttttgtgatttcatcgtctaagtgcggcattttgttgttcgtcgtc 2060  T
Q  280 ttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    || |  |||   |||||||||||| | |||| | ||||||| ||| |||  ||||||||||||    
T  2059 ttatgtggc---gtttgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatc 2000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 310
Target Start/End: Original strand, 8403 - 8542
Alignment:
Q  167 cttttttcatttcctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctgtgtgcgacgttgt 266  Q
    |||||||  ||| |||| || ||||||||||| |||  | ||||||| ||| ||| |||||||| |||||  |||||||||| |||  ||||| ||||||    
T  8403 ctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtg-atttttgtgatttcgtcatctaagtgcggcgttgt 8501  T
Q  267 gttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgt 310  Q
     |||||||||||||||| | ||   |||||||||||||| ||||    
T  8502 attgttcatcgtcttgtgcagc---gtttgatttcgcgtcttgt 8542  T

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Target: scaffold0495 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 5404 - 5479
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagat 341  Q
    |||||||| ||||||||| |||||||||||| |||| ||| || |||||||||| ||||  ||  |||||||||||    
T  5404 tgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagat 5479  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 201443 - 201372
Alignment:
Q  266 tgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaa 337  Q
    |||||||| | ||||||| ||||| ||||||||||| ||| || |||||||||| ||||| || ||||||||    
T  201443 tgttgttcgtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaa 201372  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 2003 - 1932
Alignment:
Q  180 ctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgtattttcatgatttcgtcgtctg 253  Q
    |||||||| |||||||||| ||| || ||||||||||| ||| ||||||||  ||||  |||||||||||||||    
T  2003 ctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtg--tttttgtgatttcgtcgtctg 1932  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  264 tgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatc 342  Q
    |||||||||| ||||||||  ||||||||||||||||   || |||||| |||||| |||||  | |||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 9717 - 9613
Alignment:
Q  239 tgatttcgtcgtctgtgtgcgacgttgtgttgttcatcgtcttgtacggcgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaa 338  Q
    ||||||||||||||   |||| ||||||  ||||  |||| |||| |||||||||||||| ||  | ||||||||||| || ||||| || |||||||||    
T  9717 tgatttcgtcgtctaaatgcgtcgttgttgtgtttgtcgt-ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaa 9619  T
Q  339 gatcag 344  Q
    ||||||    
T  9618 gatcag 9613  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 4133 - 4072
Alignment:
Q  288 cgttgtttgatttcgcgttttgttgtggtgtttatttggttaatattgaaagatcagcttca 349  Q
    ||||||||||||||| || || ||||||||||  |||| || ||||||||||| ||||||||    
T  4133 cgttgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaagaccagcttca 4072  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 19121 - 19053
Alignment:
Q  322 tttggttaatattgaaagatcagcttcaatcaatcacatattcaattgatgatttggacgccaatgttg 390  Q
    ||||||| |||||||||||| | ||||| ||||||||| | |||||  |||||||||| | ||||||||    
T  19121 tttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttggaggtcaatgttg 19053  T

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