View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5290_low_26 (Length: 356)
Name: NF5290_low_26
Description: NF5290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5290_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 13 - 339
Target Start/End: Original strand, 34396016 - 34396341
Alignment:
| Q |
13 |
aaaatacttttcagaccataaaaaagttcaaagaactgtttttcattaagattgcatgatgttgtcaattcagtccctgaaattattaatatttcaaaat |
112 |
Q |
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| T |
34396016 |
aaaatacttttcagaccataaaaaagttcaaagaactgtttttcattaagattgcatgatgttgtcaattcagtccctgaaattattaatatttcaaaat |
34396115 |
T |
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| Q |
113 |
aacccttgaatttgcaaatttacaatcatattagtcctatttcaaaatttattagcttcatgaaccaacttgctaaatttatgatatactcatcatcaat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34396116 |
aacccttgaatttgcaaatttacaatcatattagtcctatttcaaaatttattagcttcatgaaccaacttgctaaatttatgatatactcatcatcaat |
34396215 |
T |
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| Q |
213 |
tatgctaaaatgaatgttgaataaggtttataaagaaataaagnnnnnnnnncaaaccttaagtctccttccaagctctttgtagagaagaaaaccagag |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34396216 |
tatgctaaaatgaatgttgaataaggtttataaagaaataaag-aaaaaaaacaaaccttaagtctccttccaagctctttgtagagaagaaaaccagag |
34396314 |
T |
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| Q |
313 |
aattcagcagtacaagacctctcaaga |
339 |
Q |
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||||||||||||||||||||||||||| |
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| T |
34396315 |
aattcagcagtacaagacctctcaaga |
34396341 |
T |
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