View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5290_low_29 (Length: 347)

Name: NF5290_low_29
Description: NF5290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5290_low_29
NF5290_low_29
[»] chr3 (62 HSPs)
chr3 (18-150)||(49609092-49609224)
chr3 (202-339)||(55385124-55385261)
chr3 (196-339)||(49219740-49219883)
chr3 (196-338)||(41802979-41803121)
chr3 (202-338)||(55207613-55207749)
chr3 (205-339)||(34694383-34694517)
chr3 (238-339)||(43476215-43476316)
chr3 (215-338)||(51402348-51402471)
chr3 (212-339)||(13896825-13896952)
chr3 (196-339)||(49609364-49609507)
chr3 (237-329)||(24703374-24703466)
chr3 (210-339)||(4004751-4004881)
chr3 (214-336)||(20366191-20366313)
chr3 (273-339)||(43568924-43568990)
chr3 (269-339)||(51696523-51696593)
chr3 (278-339)||(7245155-7245216)
chr3 (247-339)||(36134355-36134448)
chr3 (247-339)||(52570515-52570607)
chr3 (276-339)||(19454300-19454363)
chr3 (202-336)||(41137705-41137829)
chr3 (196-339)||(41577056-41577199)
chr3 (212-339)||(45101797-45101924)
chr3 (237-339)||(2271261-2271364)
chr3 (242-337)||(46347672-46347767)
chr3 (202-289)||(48250868-48250955)
chr3 (202-291)||(4002502-4002590)
chr3 (196-284)||(41579728-41579816)
chr3 (212-291)||(2743395-2743474)
chr3 (212-291)||(13747716-13747794)
chr3 (210-338)||(49140793-49140926)
chr3 (196-258)||(2745235-2745297)
chr3 (207-291)||(9429846-9429930)
chr3 (196-284)||(11380422-11380510)
chr3 (238-338)||(2647648-2647749)
chr3 (238-338)||(34049103-34049207)
chr3 (202-291)||(48246399-48246488)
chr3 (238-338)||(54389818-54389922)
chr3 (196-288)||(7247860-7247952)
chr3 (262-339)||(34648151-34648230)
chr3 (196-259)||(19454354-19454417)
chr3 (196-259)||(23443135-23443198)
chr3 (212-291)||(24700718-24700797)
chr3 (196-291)||(34691606-34691701)
chr3 (202-281)||(46344924-46345003)
chr3 (197-291)||(19341591-19341685)
chr3 (202-268)||(43571705-43571771)
chr3 (202-284)||(46989534-46989616)
chr3 (290-339)||(2426559-2426608)
chr3 (212-269)||(13743290-13743347)
chr3 (196-289)||(42756140-42756233)
chr3 (202-291)||(43478827-43478916)
chr3 (200-284)||(49268849-49268933)
chr3 (248-291)||(6745323-6745366)
chr3 (212-291)||(14398532-14398611)
chr3 (202-269)||(14402989-14403056)
chr3 (202-291)||(36812823-36812913)
chr3 (196-289)||(29918340-29918433)
chr3 (196-289)||(29967493-29967586)
chr3 (215-284)||(49194953-49195022)
chr3 (201-289)||(28611099-28611187)
chr3 (238-290)||(44227135-44227187)
chr3 (208-284)||(50604424-50604500)
[»] chr7 (33 HSPs)
chr7 (196-338)||(30355189-30355331)
chr7 (196-339)||(46863293-46863436)
chr7 (196-337)||(28980123-28980265)
chr7 (225-339)||(40587671-40587785)
chr7 (212-339)||(41047774-41047901)
chr7 (196-292)||(42499390-42499486)
chr7 (247-339)||(42682026-42682118)
chr7 (276-339)||(21188375-21188438)
chr7 (262-339)||(36394887-36394964)
chr7 (210-339)||(17838645-17838775)
chr7 (270-336)||(43686859-43686925)
chr7 (274-339)||(28115481-28115546)
chr7 (286-339)||(48269712-48269765)
chr7 (276-339)||(34139932-34139995)
chr7 (238-338)||(9367670-9367774)
chr7 (205-290)||(9494804-9494889)
chr7 (196-284)||(36392106-36392194)
chr7 (212-291)||(34742392-34742471)
chr7 (196-291)||(47776313-47776408)
chr7 (281-339)||(45364169-45364227)
chr7 (196-269)||(36186492-36186564)
chr7 (196-289)||(47060908-47061000)
chr7 (212-268)||(618745-618801)
chr7 (248-291)||(15074225-15074268)
chr7 (212-291)||(19044291-19044369)
chr7 (212-291)||(20710267-20710345)
chr7 (196-259)||(27453623-27453686)
chr7 (248-291)||(42508024-42508067)
chr7 (202-288)||(29592530-29592616)
chr7 (196-290)||(37340283-37340377)
chr7 (212-269)||(5537869-5537926)
chr7 (247-291)||(17840887-17840931)
chr7 (302-338)||(48316259-48316295)
[»] chr6 (37 HSPs)
chr6 (202-339)||(13401473-13401610)
chr6 (196-339)||(12783906-12784049)
chr6 (278-339)||(29065791-29065852)
chr6 (278-339)||(29074804-29074865)
chr6 (278-339)||(29079568-29079629)
chr6 (278-339)||(29107377-29107438)
chr6 (276-339)||(29061331-29061394)
chr6 (238-338)||(6204850-6204954)
chr6 (238-338)||(11691817-11691921)
chr6 (202-291)||(29076320-29076409)
chr6 (202-291)||(29109853-29109942)
chr6 (202-291)||(29111293-29111382)
chr6 (202-291)||(31768740-31768829)
chr6 (196-280)||(2051010-2051093)
chr6 (276-339)||(32034341-32034404)
chr6 (247-338)||(30258263-30258356)
chr6 (242-291)||(11157737-11157786)
chr6 (275-339)||(17596765-17596832)
chr6 (215-284)||(28362735-28362804)
chr6 (215-291)||(31146373-31146449)
chr6 (212-291)||(13388705-13388784)
chr6 (202-257)||(29061283-29061338)
chr6 (238-299)||(22305131-22305192)
chr6 (296-333)||(26855976-26856013)
chr6 (202-257)||(29065727-29065782)
chr6 (202-257)||(29074740-29074795)
chr6 (202-257)||(29079504-29079559)
chr6 (202-257)||(29107313-29107368)
chr6 (237-291)||(11840247-11840301)
chr6 (247-289)||(13616272-13616314)
chr6 (197-282)||(7361173-7361258)
chr6 (207-268)||(18347033-18347094)
chr6 (196-289)||(18606026-18606118)
chr6 (196-269)||(18610225-18610297)
chr6 (196-289)||(23958871-23958964)
chr6 (212-284)||(32643525-32643597)
chr6 (276-304)||(34634191-34634219)
[»] chr4 (47 HSPs)
chr4 (196-339)||(56138228-56138376)
chr4 (243-339)||(958543-958639)
chr4 (247-339)||(44561279-44561371)
chr4 (202-336)||(1041922-1042056)
chr4 (196-292)||(9889975-9890071)
chr4 (208-338)||(28081451-28081582)
chr4 (276-339)||(51429278-51429341)
chr4 (276-339)||(34530744-34530807)
chr4 (276-339)||(39588127-39588190)
chr4 (216-322)||(29700268-29700374)
chr4 (207-291)||(15995714-15995798)
chr4 (207-291)||(19069179-19069263)
chr4 (262-339)||(42885496-42885575)
chr4 (270-337)||(243296-243363)
chr4 (247-326)||(4786296-4786375)
chr4 (276-339)||(34154377-34154440)
chr4 (276-339)||(56304911-56304974)
chr4 (276-338)||(6283417-6283479)
chr4 (196-290)||(41023367-41023461)
chr4 (238-338)||(6178056-6178160)
chr4 (238-338)||(49094107-49094211)
chr4 (238-338)||(55793943-55794047)
chr4 (196-284)||(955773-955861)
chr4 (207-291)||(15999796-15999880)
chr4 (196-259)||(37394229-37394292)
chr4 (208-268)||(3403840-3403900)
chr4 (238-338)||(21017951-21018054)
chr4 (238-333)||(41795307-41795406)
chr4 (197-259)||(50274742-50274804)
chr4 (202-259)||(39588079-39588136)
chr4 (196-288)||(49572900-49572992)
chr4 (46-93)||(20664041-20664088)
chr4 (212-291)||(21022885-21022964)
chr4 (219-282)||(24414839-24414902)
chr4 (230-284)||(19073659-19073713)
chr4 (237-291)||(21015761-21015815)
chr4 (231-289)||(37022060-37022118)
chr4 (202-284)||(39590572-39590654)
chr4 (276-330)||(49426792-49426845)
chr4 (237-291)||(51492093-51492147)
chr4 (202-291)||(16984158-16984247)
chr4 (300-333)||(23949961-23949994)
chr4 (200-268)||(1044539-1044607)
chr4 (297-333)||(11287557-11287593)
chr4 (196-268)||(21472504-21472576)
chr4 (196-284)||(37959724-37959812)
chr4 (196-284)||(51426518-51426606)
[»] chr8 (29 HSPs)
chr8 (217-336)||(26451482-26451601)
chr8 (196-338)||(41858073-41858213)
chr8 (196-339)||(18441390-18441533)
chr8 (212-338)||(42602457-42602583)
chr8 (248-339)||(41274625-41274716)
chr8 (276-339)||(3395927-3395990)
chr8 (276-338)||(37779713-37779773)
chr8 (196-290)||(1114724-1114818)
chr8 (276-339)||(22547504-22547567)
chr8 (196-291)||(35962288-35962383)
chr8 (212-289)||(22577662-22577739)
chr8 (238-338)||(15033095-15033197)
chr8 (287-339)||(24860454-24860506)
chr8 (197-272)||(3641628-3641703)
chr8 (202-257)||(20549263-20549318)
chr8 (196-259)||(45454387-45454450)
chr8 (202-259)||(41276889-41276946)
chr8 (202-283)||(44052231-44052312)
chr8 (196-284)||(18438615-18438703)
chr8 (208-291)||(22550862-22550945)
chr8 (196-291)||(35966746-35966841)
chr8 (276-326)||(38871834-38871884)
chr8 (250-291)||(23018720-23018761)
chr8 (215-283)||(28646252-28646320)
chr8 (215-283)||(28650836-28650904)
chr8 (196-283)||(41855349-41855436)
chr8 (247-289)||(18205818-18205860)
chr8 (202-259)||(41743877-41743934)
chr8 (247-291)||(41016446-41016490)
[»] chr5 (37 HSPs)
chr5 (196-339)||(18307235-18307378)
chr5 (212-339)||(542739-542866)
chr5 (196-326)||(20192334-20192464)
chr5 (247-339)||(11346039-11346132)
chr5 (247-339)||(3600369-3600461)
chr5 (247-339)||(25497543-25497635)
chr5 (196-291)||(34122505-34122600)
chr5 (196-290)||(34123933-34124027)
chr5 (276-338)||(42865754-42865816)
chr5 (200-291)||(41798803-41798894)
chr5 (269-335)||(35564315-35564381)
chr5 (265-339)||(8537215-8537290)
chr5 (217-291)||(7017514-7017588)
chr5 (201-291)||(25897076-25897166)
chr5 (202-284)||(28388523-28388605)
chr5 (200-282)||(39743154-39743236)
chr5 (237-338)||(7994-8098)
chr5 (196-289)||(18538334-18538427)
chr5 (238-338)||(19037416-19037520)
chr5 (196-291)||(1035165-1035260)
chr5 (202-288)||(1398591-1398677)
chr5 (196-290)||(8702196-8702290)
chr5 (202-259)||(1397379-1397436)
chr5 (202-291)||(7762241-7762329)
chr5 (196-284)||(28387250-28387338)
chr5 (196-291)||(17965830-17965925)
chr5 (202-291)||(25889981-25890070)
chr5 (196-268)||(27867840-27867912)
chr5 (300-339)||(1401389-1401428)
chr5 (202-268)||(13568095-13568161)
chr5 (202-291)||(7757312-7757401)
chr5 (196-281)||(25499894-25499979)
chr5 (228-269)||(27863442-27863483)
chr5 (238-338)||(30708926-30709030)
chr5 (247-288)||(41201760-41201801)
chr5 (224-268)||(7021878-7021922)
chr5 (196-284)||(17966890-17966978)
[»] chr2 (39 HSPs)
chr2 (210-339)||(34638136-34638261)
chr2 (228-339)||(39393050-39393161)
chr2 (196-338)||(41500184-41500326)
chr2 (196-339)||(24512148-24512291)
chr2 (267-339)||(2920465-2920537)
chr2 (196-291)||(27276371-27276466)
chr2 (216-339)||(43491110-43491233)
chr2 (250-339)||(2648152-2648241)
chr2 (250-334)||(10365746-10365830)
chr2 (247-339)||(29093780-29093869)
chr2 (277-339)||(40679546-40679608)
chr2 (277-339)||(26858175-26858237)
chr2 (196-269)||(1096576-1096649)
chr2 (196-272)||(1149453-1149529)
chr2 (196-288)||(2917664-2917756)
chr2 (276-339)||(16580547-16580610)
chr2 (196-291)||(25184827-25184921)
chr2 (238-299)||(17424155-17424216)
chr2 (196-289)||(19187222-19187315)
chr2 (202-291)||(29397897-29397986)
chr2 (207-288)||(30271066-30271147)
chr2 (238-338)||(43982222-43982326)
chr2 (250-302)||(35490741-35490793)
chr2 (196-284)||(45137437-45137525)
chr2 (212-291)||(3795334-3795413)
chr2 (208-259)||(20951075-20951126)
chr2 (208-291)||(23346773-23346856)
chr2 (196-283)||(45475421-45475508)
chr2 (207-268)||(38945754-38945815)
chr2 (212-259)||(3803572-3803619)
chr2 (228-291)||(24754021-24754084)
chr2 (202-289)||(34639313-34639400)
chr2 (197-291)||(7189948-7190041)
chr2 (196-274)||(19186728-19186806)
chr2 (247-289)||(34921758-34921800)
chr2 (205-259)||(36255007-36255061)
chr2 (238-338)||(3937798-3937902)
chr2 (200-268)||(1101072-1101140)
chr2 (197-289)||(41008927-41009018)
[»] scaffold0199 (1 HSPs)
scaffold0199 (210-339)||(12336-12466)
[»] chr1 (59 HSPs)
chr1 (265-339)||(29763168-29763242)
chr1 (242-339)||(6434775-6434872)
chr1 (196-339)||(13972045-13972186)
chr1 (269-339)||(42572706-42572776)
chr1 (276-339)||(27487615-27487678)
chr1 (196-291)||(6562158-6562253)
chr1 (276-339)||(14174860-14174923)
chr1 (276-338)||(49927451-49927513)
chr1 (238-338)||(19159646-19159750)
chr1 (202-291)||(23359346-23359435)
chr1 (286-339)||(26637205-26637258)
chr1 (247-339)||(13147528-13147620)
chr1 (196-291)||(9711648-9711743)
chr1 (210-333)||(24364680-24364803)
chr1 (207-289)||(6557907-6557989)
chr1 (245-339)||(29709260-29709354)
chr1 (202-284)||(52802117-52802199)
chr1 (269-326)||(49395657-49395714)
chr1 (196-288)||(41804033-41804125)
chr1 (212-291)||(44470008-44470087)
chr1 (216-290)||(11183187-11183261)
chr1 (278-339)||(49426750-49426812)
chr1 (196-284)||(19499116-19499202)
chr1 (208-289)||(44336242-44336323)
chr1 (288-336)||(4208454-4208502)
chr1 (196-284)||(23276112-23276200)
chr1 (200-280)||(51289968-51290048)
chr1 (212-291)||(15047279-15047358)
chr1 (276-339)||(44596896-44596959)
chr1 (196-289)||(46973185-46973277)
chr1 (286-339)||(51269009-51269062)
chr1 (267-339)||(29435025-29435096)
chr1 (196-259)||(5077922-5077985)
chr1 (196-291)||(38689913-38690007)
chr1 (196-291)||(48751407-48751502)
chr1 (214-289)||(50113306-50113381)
chr1 (228-289)||(8460096-8460156)
chr1 (196-289)||(13178131-13178224)
chr1 (238-299)||(13636111-13636172)
chr1 (196-289)||(29261395-29261488)
chr1 (196-269)||(51666658-51666730)
chr1 (286-339)||(36908641-36908698)
chr1 (196-284)||(46141763-46141851)
chr1 (242-289)||(19054249-19054296)
chr1 (196-267)||(23913838-23913909)
chr1 (196-259)||(30905752-30905815)
chr1 (269-339)||(41779739-41779803)
chr1 (231-269)||(12643272-12643310)
chr1 (211-269)||(29352255-29352313)
chr1 (207-269)||(30910022-30910084)
chr1 (243-284)||(26633555-26633596)
chr1 (276-339)||(35526984-35527051)
chr1 (202-259)||(51288874-51288931)
chr1 (196-284)||(18975124-18975212)
chr1 (211-291)||(19161888-19161968)
chr1 (212-268)||(20349454-20349510)
chr1 (212-268)||(41453835-41453891)
chr1 (290-338)||(44338216-44338264)
chr1 (196-268)||(44465577-44465649)
[»] scaffold0192 (1 HSPs)
scaffold0192 (244-339)||(18848-18943)
[»] scaffold0201 (1 HSPs)
scaffold0201 (202-291)||(22390-22479)
[»] scaffold0494 (1 HSPs)
scaffold0494 (196-291)||(812-907)
[»] scaffold0341 (1 HSPs)
scaffold0341 (196-291)||(17348-17443)
[»] scaffold0176 (1 HSPs)
scaffold0176 (276-339)||(857-920)
[»] scaffold0513 (1 HSPs)
scaffold0513 (212-284)||(8196-8268)
[»] scaffold0116 (2 HSPs)
scaffold0116 (203-283)||(15960-16040)
scaffold0116 (196-257)||(11282-11343)
[»] scaffold0361 (1 HSPs)
scaffold0361 (196-291)||(4397-4492)
[»] scaffold0618 (1 HSPs)
scaffold0618 (202-281)||(3872-3951)
[»] scaffold0101 (1 HSPs)
scaffold0101 (238-332)||(36486-36584)
[»] scaffold0012 (1 HSPs)
scaffold0012 (228-291)||(232829-232892)
[»] scaffold0388 (1 HSPs)
scaffold0388 (202-260)||(11738-11796)
[»] scaffold0340 (1 HSPs)
scaffold0340 (197-291)||(1178-1271)
[»] scaffold0260 (1 HSPs)
scaffold0260 (212-268)||(11777-11833)


Alignment Details
Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 49609092 - 49609224
Alignment:
Q  18 aataatccaaacataaacaatacccttttatgatggatctatctttttgtataaatgctttcaaattattgtggtcattttttacattactgtactattt 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49609092 aataatccaaacataagcaatacccttttatgatggatctatctttttgtataaatgctttcaaattattgtggtcattttttacattactgtactattt 49609191  T
Q  118 tttaacagaaaaaatcttctctttatattgtca 150  Q
    |||||||||||||||||||||||||||||||||    
T  49609192 tttaacagaaaaaatcttctctttatattgtca 49609224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 55385124 - 55385261
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgcta 301  Q
    ||||||||| ||||||||||| ||| || |  || ||||| ||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  55385124 ttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgcta 55385223  T
Q  302 caaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  55385224 caaatctggcagaagctctctcatccattattaatctc 55385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 49219883 - 49219740
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    |||| |||||||| | |||| |||||| ||| |||||||| ||||| ||| |||||||||||||  ||||||||||  |||||||||| |||||||||||    
T  49219883 atacaattttgcctcctcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaactatcgaggatctt 49219784  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  49219783 ctgctacaaatttgacagaagctctcccatccattattcatctc 49219740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 41802979 - 41803121
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||  ||||||||||| ||| || |||||| |||  ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  41802979 atacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 41803078  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
     ||||||||||||| ||||||||||||||||||||||||||||    
T  41803079 ttgctacaaatctggcagaagctctctcatccattattcatct 41803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 55207749 - 55207613
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgcta 301  Q
    ||||||||| ||||||||||| ||| || |||||  |||  |||||||||||||||||  |||| |||||  ||||||||||| ||||||||||||||||    
T  55207749 ttttgccccatcggcagttaactgccgaagaattcaaaaaccggttgcagttaactgcctaggacaaccttggtagttaactgccgaggatcttctgcta 55207650  T
Q  302 caaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||| ||||||||||||||||||||||||||||    
T  55207649 caaatctggcagaagctctctcatccattattcatct 55207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 34694517 - 34694383
Alignment:
Q  205 tgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaa 304  Q
    |||||| ||||||||||| ||  |||||||| ||||| ||| |||||| ||||||  || |||||||| | ||||||||| |||||||||||||||||||    
T  34694517 tgccccctcggcagttaactgtcgaggaattagaaatccggctgcagtaaactgccgagaaaaacctcgggagttaactgccgaggatcttctgctacaa 34694418  T
Q  305 atctgacagaagctctctcatccattattcatctc 339  Q
    ||||| |||||||||||||||||||||||||||||    
T  34694417 atctggcagaagctctctcatccattattcatctc 34694383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 43476215 - 43476316
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatc 337  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43476215 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttgctacaaatctgacagaagctctctcatccattattcatc 43476314  T
Q  338 tc 339  Q
    ||    
T  43476315 tc 43476316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 338
Target Start/End: Complemental strand, 51402471 - 51402348
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacaga 314  Q
    |||||||||||| ||  ||||  ||| ||| ||| |||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  51402471 gcagttaattgcagaataattcaaaaatcgattgtagttaactgtcgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctgtcaga 51402372  T
Q  315 agctctctcatccattattcatct 338  Q
    ||||||||||||||||||||||||    
T  51402371 agctctctcatccattattcatct 51402348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 13896952 - 13896825
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgac 311  Q
    |||||||||||||||||| |||||| | |   || ||||||||||||   ||||||||||| ||||||||||| ||| ||| |||| ||||||||||| |    
T  13896952 tcggcagttaattgctgaagaatttaataactggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaagattttctactacaaatctggc 13896853  T
Q  312 agaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||||||||||||||    
T  13896852 agaagctctctcatccattattcatctc 13896825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 49609364 - 49609507
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    |||| ||||||| ||||||  |||||||||  ||||||||||||||||||  |||||||| ||   || |||||||| ||||||||||| |||||| |||    
T  49609364 atacaattttgctccttcgatagttaattgtcgaggaatttgaaattcggccgcagttaattgtcgagaaaaacctcggtagttaactgccgaggaactt 49609463  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| || ||||||||| || |||||||||||||    
T  49609464 ctgctacaaatctggcataagctctcttattcattattcatctc 49609507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 329
Target Start/End: Complemental strand, 24703466 - 24703374
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccat 329  Q
    ||||||||| |||||||||||||  |||||| |||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  24703466 gaaattcggatgcagttaactgccgaggaaatcctcaggagttaactgccgatgatcttctgctacaaatctggcagaagctctctcatccat 24703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 210 - 339
Target Start/End: Complemental strand, 4004881 - 4004751
Alignment:
Q  210 cttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctg 309  Q
    |||||| |||||||||| || |  || ||||| ||| |||||||||||||  ||||||||||| ||| ||||||| |||||||||||||||||||| |||    
T  4004881 cttcggtagttaattgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtacttaactgccgaggatcttctgctacaaacctg 4004782  T
Q  310 acagaagct-ctctcatccattattcatctc 339  Q
     ||||| || |||||||||||||||||||||    
T  4004781 gcagaatctcctctcatccattattcatctc 4004751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 336
Target Start/End: Original strand, 20366191 - 20366313
Alignment:
Q  214 ggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacag 313  Q
    ||||||||| ||| ||||||||  |||  | | ||||||||||||||||  |||||||| |||||||| ||||||||||||||| ||||||||||  |||    
T  20366191 ggcagttaactgccgaggaattcaaaaaccagctgcagttaactgctaaaaaaaacctcggtagttaattgtcgaggatcttctactacaaatctaccag 20366290  T
Q  314 aagctctctcatccattattcat 336  Q
    ||||| |||||| ||||||||||    
T  20366291 aagctttctcattcattattcat 20366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 43568924 - 43568990
Alignment:
Q  273 agtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43568924 agtagttaactgctgaggatcttctgttacaaatctgacagaagctctctcatccattattcatctc 43568990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 51696593 - 51696523
Alignment:
Q  269 cctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  51696593 cctcggtagttaactgccgaggatcttctgctgcaaatctggcagaagctctctcatccattattcatctc 51696523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 7245155 - 7245216
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctcatccattattcatctc 7245216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 36134355 - 36134448
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagct-ctctcatccattattcatctc 339  Q
    |||||||||||||  ||||||||||| | ||||||||| |||||||||||||||||||||||| ||||| || |||| ||||||||||||||||    
T  36134355 tgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgctacaaatctggcagaatctcctcttatccattattcatctc 36134448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 52570607 - 52570515
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| |  || |||||||| ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  52570607 tgcagttaactaccgagaaaaacctcggtagttaactgccgaggatcttctactacaaatctggcagaaactctctcattcattattcatctc 52570515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 19454363 - 19454300
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  19454363 agttaactgccgaggatcttctactacaaatctggcagaagctctctcatccattattcatctc 19454300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 41137705 - 41137829
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgcta 301  Q
    |||||| || || |||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||          ||||  ||||||||||||||||    
T  41137705 ttttgctccatcagcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac----------aactaccgaggatcttctgcta 41137794  T
Q  302 caaatctgacagaagctctctcatccattattcat 336  Q
    |||||||| ||||||||||||||||||||||||||    
T  41137795 caaatctggcagaagctctctcatccattattcat 41137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 41577056 - 41577199
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| |||||||  |||| ||||||| ||  || |||||  ||| |||||||||||||||||   |  ||||| || ||||| ||||| ||||||||||    
T  41577056 atacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggttgcagttaactgtcgacaaaaacttcggtagtaaactgccgaggatctt 41577155  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||  |||||||||||||||||||||| ||||||    
T  41577156 ctgctacaaatcttgcagaagctctctcatccattatccatctc 41577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 45101924 - 45101797
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgac 311  Q
    |||||||||||||| |||||||||  |||  ||| |||||||||||||  |||    | |  ||||||||||| |||||||||||||||||||||||| |    
T  45101924 tcggcagttaattgttgaggaattcaaaaaccggctgcagttaactgccgaggttttctttggtagttaactgccgaggatcttctgctacaaatctggc 45101825  T
Q  312 agaagctctctcatccattattcatctc 339  Q
    ||||||||||||||  ||||||||||||    
T  45101824 agaagctctctcatatattattcatctc 45101797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 2271364 - 2271261
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagct-ctctcatccattattca 335  Q
    ||||| ||| |||||||||||||  ||| || |||| | ||||||||| |||||||||||||||||||||||| ||||| || ||||||||||| |||||    
T  2271364 gaaatccggctgcagttaactgccgagggaatcctcgggagttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccataattca 2271265  T
Q  336 tctc 339  Q
    ||||    
T  2271264 tctc 2271261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 46347767 - 46347672
Alignment:
Q  242 tcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatc 337  Q
    |||| |||||||||||||  |||||||||||  || ||||||||||| |||||||||||||||||| |  |||| |||||||||||||| ||||||    
T  46347767 tcggctgcagttaactgccgaggaaaacctcgataattaactgtcgaagatcttctgctacaaatcagggagaaactctctcatccattgttcatc 46347672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 48250955 - 48250868
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||| ||||||||||| |||||||||||||||| | ||| |||||||||||||  ||||||||||| | ||||||||| ||||    
T  48250955 ttttgccccctcggcagttaactgctgaggaatttgaattccggctgcagttaactgccgaggaaaacctcgggagttaactgccgag 48250868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 4002590 - 4002502
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||||||||| | |||||||||||||||| ||| |||||||||||||  ||||||||||| | ||||||||| ||||||    
T  4002590 ttttgcccct-cggcagttaactactgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 4002502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 41579816 - 41579728
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||||| |||| ||||||||||||||||||||||||  | |  ||| |||||||||||||  ||||||||||| |||||||||||    
T  41579816 atacgatttttccccctcggcagttaattgctgaggaattcaataaccggctgcagttaactgccgaggaaaacctcggtagttaactg 41579728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 2743395 - 2743474
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| | ||||||||| ||||||    
T  2743395 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 2743474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 13747794 - 13747716
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||| || ||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  13747794 tcggcagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaacctc-gtagttaactgccgagga 13747716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 338
Target Start/End: Complemental strand, 49140926 - 49140793
Alignment:
Q  210 cttcggcagttaattgctgaggaatttg---aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-a 303  Q
    ||||||||||||||||| ||  ||||||   |||| ||| |||||||||||||  ||||||||||||||||||||||| |||||| ||||||  |||| |    
T  49140926 cttcggcagttaattgccga--aatttgctcaaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggaacttctgcactacaa 49140829  T
Q  304 aatctgacagaagct-ctctcatccattattcatct 338  Q
    |||||| ||||| || ||||||||||||||| ||||    
T  49140828 aatctggcagaatctcctctcatccattattgatct 49140793  T

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Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 2745297 - 2745235
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactg 258  Q
    |||||||||| |||| |||| |||||| |||||||||||||||||||||| ||||||||||||    
T  2745297 atacgattttaccccctcggtagttaactgctgaggaatttgaaattcggctgcagttaactg 2745235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 9429930 - 9429846
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||||||||| ||| ||||||||||||||| || ||||||||| | |  ||||||||||| ||||||||||| ||||||    
T  9429930 ccccctcggcagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaacctcggtagttaactgccgagga 9429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 11380422 - 11380510
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||||||||||||||| ||| ||||||||  ||||  ||||||||||||||||  |||| |||||| |||||| ||||    
T  11380422 atacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggttgcagttaactgccgaggataacctcggtagtttactg 11380510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 2647749 - 2647648
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctac-aaatctgacagaagct-ctctcatccattattca 335  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||| || |||| ||||||| |||||  | |||||||||||||||||    
T  2647749 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctgct-ctacaaaatctggcagaatttcctctcatccattattca 2647651  T
Q  336 tct 338  Q
    |||    
T  2647650 tct 2647648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 34049103 - 34049207
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||| ||||||  |||| ||||||| ||||| || |||||||||||||||    
T  34049103 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattatt 34049202  T
Q  334 catct 338  Q
     ||||    
T  34049203 gatct 34049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 48246399 - 48246488
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||| |||||| |  || ||||| ||| ||||||||||||   ||||||||||| ||||||||||| ||||||    
T  48246399 ttttgccccctcggcagttaactgctgaagttttagaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 48246488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 54389818 - 54389922
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||| ||||||  |||| ||||||| ||||| || |||||||||||||||    
T  54389818 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattatt 54389917  T
Q  334 catct 338  Q
     ||||    
T  54389918 gatct 54389922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 7247952 - 7247860
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||  | |  ||| ||||||||||||   ||||||||||| |||||||||||||||    
T  7247952 atacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctgcagttaactgacgaggaaaacctcggtagttaactgtcga 7247860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 34648230 - 34648151
Alignment:
Q  262 aggaaaacctcagtagttaactgtcgaggatcttctgctacaaa--tctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| | ||| || ||  ||||||||| |||||||||  |||| |||||||||||||||||||||||||||||    
T  34648230 aggaaaacctcggcagtaaattgctgaggatcttatgctacaaaattctggcagaagctctctcatccattattcatctc 34648151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 19454417 - 19454354
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||| ||||||||  ||||||||||| ||||||||||||  ||| ||||||||||||||||||    
T  19454417 atacgcttttgccctctcggcagttaactgctgaggaattcaaaaatcggttgcagttaactgc 19454354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 23443198 - 23443135
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||| | ||| |||||||||||||    
T  23443198 atacgattttaccccctcggcagttaactgccgaggaatttgaattccggctgcagttaactgc 23443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 24700718 - 24700797
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||  |||||||| ||||| ||||||||||||||| |  |||||| |||| ||||||||||| ||||||    
T  24700718 tcggcagttaactgtcgaggaattagaaatccggttgcagttaactcccgaggaaatcctcggtagttaactgccgagga 24700797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 34691606 - 34691701
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||||||| | ||||||||||| ||| |||||| |  |||| ||| ||||||||||||   ||||||||||| ||||||||||| ||||||    
T  34691606 atacaattttgcctcctcggcagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 34691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 46344924 - 46345003
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaa 281  Q
    ||||||||| ||||||||||| ||  ||||||||  ||| |||| |||||||||||||  ||||||||||| ||||||||    
T  46344924 ttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 46345003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 19341685 - 19341591
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||| ||| ||||||||||| ||| |||||||| ||||| ||| ||||||||||| |  |||||||| || | ||||||||| ||||||    
T  19341685 tacgtttttgtcccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgccgagga 19341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 43571771 - 43571705
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||||||| ||||||||||| ||||||||||||  ||| |||| ||||||||||||| || |||||    
T  43571771 ttttgccccctcggcagttaactgctgaggaattcaaaagtcggctgcagttaactgccaatgaaaa 43571705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 46989534 - 46989616
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||  ||||||||||| | | ||| |||||||| | ||| |||||||||||||  ||||||||||| |||||||||||    
T  46989534 ttttgccctctcggcagttaactaccgagaaatttgaattccggctgcagttaactgccgaggaaaacctcggtagttaactg 46989616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 2426559 - 2426608
Alignment:
Q  290 gatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||| |||| || ||||||||||||||| |||||||||||||    
T  2426559 gatcttctgctataaatttggcagaagctctctcattcattattcatctc 2426608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 13743290 - 13743347
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||    
T  13743290 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 42756140 - 42756233
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||||||| || |||||||| ||  ||||||||  |||| |||||||||||||||||  |||||||||||   ||||||||| ||||    
T  42756140 atacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcgagagttaactgccgag 42756233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 43478916 - 43478827
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| ||| ||||||||||| |||||| |  || ||||| ||| |||||||||||||  |||||||| || ||||||||||| ||||||    
T  43478916 ttttgtcccctcggcagttaactgctgaagttttagaaatccggctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 43478827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 49268933 - 49268849
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||| |||||| || ||||| ||  ||||||||  |||| |||||||||||||||||  |||||||| || |||||||||||    
T  49268933 gattttgtcccttcagccgttaactgtggaggaattaaaaatccggttgcagttaactgccgaggaaaacatcggtagttaactg 49268849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 6745366 - 6745323
Alignment:
Q  248 gcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||    
T  6745366 gcagttaactgccaaggaaaacctcggtagttaactgccgagga 6745323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 14398532 - 14398611
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| ||||| ||| |||||||||||| | ||| |||||||||||||  ||| || |||| | ||||||||||||||||    
T  14398532 tcggcggttaactgccgaggaatttgaattccggctgcagttaactgccgagggaatcctcggaagttaactgtcgagga 14398611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 14403056 - 14402989
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||||||| ||||||||||| ||| |||||||||||||| |||  | ||||||||||  ||||||||    
T  14403056 ttttgccccctcggcagttaactgccgaggaatttgaaatccggcggtagttaactgccgaggaaaac 14402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 36812823 - 36812913
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattc-ggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||  | | ||||||||||||| || || ||||||||||| |  ||||||||||| ||||| ||||| ||||||    
T  36812823 ttttgccccctcggcagttagctaccgaggaatttgaaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 36812913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 29918433 - 29918340
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||| ||| |||||| |||| ||| ||  |||| ||||  ||| |||||||||||||  |||||||||||  |||||||||| ||||    
T  29918433 atacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29918340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 29967586 - 29967493
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||| ||| |||||| |||| ||| ||  |||| ||||  ||| |||||||||||||  |||||||||||  |||||||||| ||||    
T  29967586 atacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29967493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 49194953 - 49195022
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||| ||||||||||||  |||  ||| |||||||||||| |||||||||  || |||||||||||    
T  49194953 gcagttaactgctgaggaattaaaaagccggctgcagttaactgttaaggaaaatttcggtagttaactg 49195022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 28611187 - 28611099
Alignment:
Q  201 attttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||||||| ||||||||||| ||| ||| ||||  |||  ||| |||||||||||||  ||||||||  | ||||||||||| ||||    
T  28611187 attttgccccctcggcagttaactgccgagaaattcaaaaaccggctgcagttaactgccgaggaaaacaacggtagttaactgccgag 28611099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 44227135 - 44227187
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    |||||||| || ||||||||||  ||||||||||| ||||||||||| |||||    
T  44227135 aaattcggctggagttaactgccgaggaaaacctcggtagttaactgccgagg 44227187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 50604500 - 50604424
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||| ||||||||||||||||||| |  ||| || | ||||||||||| |  ||||||||||| | |||||||||    
T  50604500 cccttcagcagttaattgctgaggaagtccaaaatcagctgcagttaactaccgaggaaaacctcggcagttaactg 50604424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 30355331 - 30355189
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| |||||||||||||||||| |||||  ||| |||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  30355331 atacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 30355232  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  30355231 ctgctacaaatctggcagaagctctctcatccattattcatct 30355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 46863436 - 46863293
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| ||||||||||| ||| ||| ||||  |||  ||| ||||||||||||| || ||||| ||| ||||||||||| ||| ||||||    
T  46863436 atacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcagttaactgcgaacgaaaatctctgtagttaactgccgaagatctt 46863337  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  46863336 ctgctacaaatctggcagaagctctttcatccattattcatctc 46863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 196 - 337
Target Start/End: Complemental strand, 28980265 - 28980123
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgct-aaggaaaacctcagtagttaactgtcgaggatct 294  Q
    ||||| ||||||||| || |||||||  ||| || |||||  | || ||| |||||||||||||  |||||||||||| ||||||||||| ||||||| |    
T  28980265 atacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatgcagttaactgccgaaggaaaacctcggtagttaactgccgaggattt 28980166  T
Q  295 tctgctacaaatctgacagaagctctctcatccattattcatc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28980165 tctgctacaaatctgacagaagctctctcatccattattcatc 28980123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 40587671 - 40587785
Alignment:
Q  225 gctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctca 324  Q
    ||||||||||| ||||| ||  ||||||||||||   ||||||||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||    
T  40587671 gctgaggaattagaaatccgactgcagttaactgtcgaggaaaacctcagtagttaactgccgaggatcttatgctataaatctgaaagaagctctctca 40587770  T
Q  325 tccattattcatctc 339  Q
    |||||||||||||||    
T  40587771 tccattattcatctc 40587785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 41047774 - 41047901
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgac 311  Q
    |||| |||||| ||| || |||||| | | |||| || ||||||||||  |||||||| || ||||||||||| ||||||||||||||||||||||||      
T  41047774 tcggtagttaactgcagaagaatttaataatcgggtgtagttaactgccgaggaaaacttcggtagttaactgccgaggatcttctgctacaaatctgga 41047873  T
Q  312 agaagctctctcatccattattcatctc 339  Q
     |||||||||||||||||||||||||||    
T  41047874 ggaagctctctcatccattattcatctc 41047901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 42499390 - 42499486
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggat 292  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||| ||  |||||||||||||  ||||||||||| ||||||||||| |||||||    
T  42499390 atacgattttaccccttcgacagttaattgccgaggaatttgaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 42499486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 42682026 - 42682118
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||  ||||||||||| ||| ||||||| |||||||||||||||||||||||  || ||| ||||||||||||||||||||||    
T  42682026 tgcagttaactgccgaggaaaacctcggtaattaactgccgaggatcttctgctacaaatctagcataagttctctcatccattattcatctc 42682118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 21188438 - 21188375
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21188438 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 21188375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 36394964 - 36394887
Alignment:
Q  262 aggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  36394964 aggaaaacctcggtagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccgttattaatctc 36394887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 339
Target Start/End: Original strand, 17838645 - 17838775
Alignment:
Q  210 cttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctg 309  Q
    ||||||||||||| ||| || |  || ||||| ||| |||||| |||| |  |||||||||||  |||||||||| ||| ||||||||||||||||||||    
T  17838645 cttcggcagttaactgccgaagttttagaaatccggctgcagtaaactaccgaggaaaacctcgatagttaactgccgacgatcttctgctacaaatctg 17838744  T
Q  310 acagaagct-ctctcatccattattcatctc 339  Q
     ||||| || |||||||||||||||||||||    
T  17838745 gcagaatctcctctcatccattattcatctc 17838775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 43686925 - 43686859
Alignment:
Q  270 ctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcat 336  Q
    ||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  43686925 ctcagtagttaactgccgagaattttctgctacaaatctgacataagctctctcatccattattcat 43686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 28115546 - 28115481
Alignment:
Q  274 gtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||| |||| |||||||||||||||||  || ||||||||||||||||||||||||||    
T  28115546 gtagttaactgttgagggtcttctgctacaaatctagcataagctctctcatccattattcatctc 28115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 48269712 - 48269765
Alignment:
Q  286 cgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  48269712 cgaggatcttctgctacaaatctgacaaaagttctctcatccattattcatctc 48269765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 34139932 - 34139995
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||    
T  34139932 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctc 34139995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 9367774 - 9367670
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||| ||||||  |||| ||||||| ||||| || |||||||||||||||    
T  9367774 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattatt 9367675  T
Q  334 catct 338  Q
     ||||    
T  9367674 gatct 9367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 9494889 - 9494804
Alignment:
Q  205 tgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    |||||| ||||||||||| ||| ||||||||  |||  ||| |||||||||||||  ||||||||||| | |||||||||||||||    
T  9494889 tgccccctcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaactgtcgagg 9494804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 36392106 - 36392194
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||| ||| ||||||| || |||||||||  ||| |||||||| |||||||||  ||||||||||||  |||||||||    
T  36392106 atacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcggttgcggttaactgccgaggaaaacctcaaaagttaactg 36392194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 34742471 - 34742392
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||  |||||||| |||||  |  |||||||||||||  ||||||||||| | ||||||||||||||||    
T  34742471 tcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgaggaaaacctcggaagttaactgtcgagga 34742392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 47776313 - 47776408
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| ||| ||||||| ||| ||| ||||  ||||  || |||||||||||||  ||||||||||| ||| ||||||| ||||||    
T  47776313 atacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgaggaaaacctcggtaattaactgccgagga 47776408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 45364227 - 45364169
Alignment:
Q  281 actgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||| ||||||||||| ||||||||||||  ||||||||||| ||| ||||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctcttatctattattcatctc 45364169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 36186564 - 36186492
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||| ||||||||| ||||||||||| ||| |||||||| ||||  |||||||||||||||||  ||||||||    
T  36186564 atacgcttttgccccctcggcagttaaatgccgaggaattcgaaa-ccggttgcagttaactgccgaggaaaac 36186492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 47060908 - 47061000
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||||||| ||||||||||| ||  ||||||||  |||| ||| || ||||||||||  ||||||||||| ||||||||||| ||||    
T  47060908 atacgtttttgccccctcggcagttaactgtcgaggaattcaaaat-cggctgtagttaactgccgaggaaaacctcggtagttaactgccgag 47061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 618801 - 618745
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  618801 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 15074268 - 15074225
Alignment:
Q  248 gcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||    
T  15074268 gcagttaactgccgaggaaaacctcggtagttaactgtcgagga 15074225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 19044291 - 19044369
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| |||||||||||||  ||  ||||||||| |||  |||||||| || ||||||||||| ||||||    
T  19044291 tcggcagttaattgccgaggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 19044369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 20710345 - 20710267
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| |||||||||||||  ||  ||||||||| |||  |||||||| || ||||||||||| ||||||    
T  20710345 tcggcagttaattgccgaggaatttgaaa-ccgactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 20710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 27453686 - 27453623
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    |||||| |||||||| ||||||||||| ||| ||||||||  |||| ||| |||||||||||||    
T  27453686 atacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaactgc 27453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 42508067 - 42508024
Alignment:
Q  248 gcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  42508067 gcagttaactgctgaggaaaatctcagtagttaactgccgagga 42508024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 29592530 - 29592616
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||||||| | ||||||||| ||  |||||||||||||| ||  |||| ||||||||  | |||||| || |||||||||||||||    
T  29592530 ttttgcccccttggcagttaactgtcgaggaatttgaaatccgactgcaattaactgccgatgaaaacttcggtagttaactgtcga 29592616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 37340283 - 37340377
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    ||||| ||||| | ||||| ||||||| ||  ||||||||  |||  |||||||||||||||||  || |||||||| ||||||||||| |||||    
T  37340283 atacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgagaaaaacctcggtagttaactgccgagg 37340377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 5537869 - 5537926
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||||||||  ||| |||||||| ||||||||| |||||||||||||  ||||||||    
T  5537869 tcggcagttagctgccgaggaattagaaattcggctgcagttaactgccgaggaaaac 5537926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 17840931 - 17840887
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  17840931 tgcagttaactgccgaggaaaacctcggtagttaactgccgagga 17840887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 48316295 - 48316259
Alignment:
Q  302 caaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  48316295 caaatctggcagaagctctctcatccattattaatct 48316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 13401473 - 13401610
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgcta 301  Q
    ||||||||| ||||||||||| ||| ||||||||  ||| |||| ||||||||||||||||||||||  |  ||||||||||  ||||||||||||||||    
T  13401473 ttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcagttaactgctaaggaaaatattggtagttaactaccgaggatcttctgcta 13401572  T
Q  302 caaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13401573 caaatatgacagaagctctctcatccattattcatctc 13401610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 12784049 - 12783906
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| ||||||||||| ||| || |||||  | |  ||| |||||||| |||   ||||||||||||||||||||||| ||||||||||    
T  12784049 atacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagttagctgtcgaggaaaacctcagtagttaactgccgaggatctt 12783950  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||  | ||||||||||||||||||||||||||    
T  12783949 ctgctacaaatctggaaaaagctctctcatccattattcatctc 12783906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 29065791 - 29065852
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctc 29065852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 29074804 - 29074865
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctc 29074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 29079568 - 29079629
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctc 29079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 29107377 - 29107438
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctc 29107438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 29061331 - 29061394
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29061331 agttaacttccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctc 29061394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 6204850 - 6204954
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  6204850 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 6204949  T
Q  334 catct 338  Q
     ||||    
T  6204950 gatct 6204954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 11691817 - 11691921
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  11691817 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 11691916  T
Q  334 catct 338  Q
     ||||    
T  11691917 gatct 11691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 29076409 - 29076320
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||||||||| ||  || |  || ||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  29076409 ttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 29109942 - 29109853
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||||||||| ||  || |  || ||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  29109942 ttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29109853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 29111382 - 29111293
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||||||||| ||  || |  || ||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  29111382 ttttgccccttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 31768740 - 31768829
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||| ||| ||||||||  |||| ||| ||||||||| |||  ||||||||||| ||||||||||| ||||||    
T  31768740 ttttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 31768829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 280
Target Start/End: Original strand, 2051010 - 2051093
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagtta 280  Q
    ||||| |||||| |||||||||||||| ||| || ||||||||||  |||||||||||||||||  ||||||||||| |||||||    
T  2051010 atacgtttttgctccttcggcagttaactgccgatgaatttgaaac-cggttgcagttaactgccgaggaaaacctcggtagtta 2051093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 32034404 - 32034341
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| ||| |||||||||||||||||||| |||||| ||||| ||||||||||| ||||    
T  32034404 agttaactgccgatgatcttctgctacaaatctggcagaagatctcttatccattattcgtctc 32034341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 30258356 - 30258263
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctac--aaatctgacagaagctctctcatccattattcatct 338  Q
    ||||||||||||   ||||||| ||| | ||||||||| |||  |||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  30258356 tgcagttaactgtcgaggaaaatctcggcagttaactgccgataatcttcagctacgaaaatctgagagaagctctctcatccattattcatct 30258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 11157737 - 11157786
Alignment:
Q  242 tcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  11157737 tcggctgcagttaactgctgaggaaaacttcagtagttaactgtcgagga 11157786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 17596832 - 17596765
Alignment:
Q  275 tagttaactgtcgaggatcttctgctac---aaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||| |||||||||||||||||| |   ||||||| |||||||| ||||||||||||||||||||    
T  17596832 tagttaattgtcgaggatcttctgctgctataaatctggcagaagctatctcatccattattcatctc 17596765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 28362804 - 28362735
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||| ||| |||||||||||||| ||| |||||||||||||  |||||||||||  ||||||||||    
T  28362804 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactg 28362735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 31146373 - 31146449
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||| ||| |||||||||||||| ||| ||||||||||||   |||||||| || ||||||||||| ||||||    
T  31146373 gcagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactgccgagga 31146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 13388784 - 13388705
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||||| ||| ||| ||||| |||||||| ||||||||||||   ||||||||||| ||||||||||| ||||||    
T  13388784 tcggtagttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 13388705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 29061283 - 29061338
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  29061283 ttttgccccctcggcagttaactgccgaggaattagaaattcggctgcagttaact 29061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 22305131 - 22305192
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgc 299  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||| ||||    
T  22305131 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 22305192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 26855976 - 26856013
Alignment:
Q  296 ctgctacaaatctgacagaagctctctcatccattatt 333  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26855976 ctgctacaaatctggcagaagctctctcatccattatt 26856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 29065727 - 29065782
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||    
T  29065727 ttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 29074740 - 29074795
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||    
T  29074740 ttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 29079504 - 29079559
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||    
T  29079504 ttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 29107313 - 29107368
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||    
T  29107313 ttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 11840301 - 11840247
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||||   ||||||||||| ||||||||||| ||||||    
T  11840301 gaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 11840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 13616272 - 13616314
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||||||||||||| |||||| || ||||||||||||||||    
T  13616272 tgcagttaactgctaaagaaaacttcggtagttaactgtcgag 13616314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 7361173 - 7361258
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaac 282  Q
    |||| ||||| ||| |||||| |||| ||||||||| ||| |||  ||| |||||||||||||  |||||| |||| |||||||||    
T  7361173 tacgtttttgtcccgtcggcaattaactgctgaggattttaaaaaccggctgcagttaactgccgaggaaatcctcggtagttaac 7361258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 18347033 - 18347094
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||| ||||||||||| ||| ||||||| |||||| ||| |||||||||||||  |||||||    
T  18347033 ccccctcggcagttaactgccgaggaatctgaaatccggctgcagttaactgccgaggaaaa 18347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 18606026 - 18606118
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||||||| |||| |||||| |||  |||||||||| |  ||| |||||||||||||  ||||||||||| ||| ||||||| ||||    
T  18606026 atacgtttttgccccctcggtagttaactgcctaggaatttgacac-cggctgcagttaactgccgaggaaaacctcggtacttaactgccgag 18606118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 18610297 - 18610225
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||| |||||||||||||| |||||| ||| |||||||||||||  ||| |||| ||||||||  ||||||||    
T  18610297 atacgtttttgccccttcggtagttaaatgccgaggaatttgaaa-ccggctgcatttaactgccgaggaaaac 18610225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 23958871 - 23958964
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||| ||| ||||||||||| ||| ||| ||||  |||  ||| ||||||||| |||  ||||||||||| ||||||||||| ||||    
T  23958871 atacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgcagttaaatgccgaggaaaacctcggtagttaactgccgag 23958964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 32643597 - 32643525
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||||| |||  |||||||  |||| ||| ||||||||||||   ||||||||||| |||||||||||    
T  32643597 tcggcagttaactgccaaggaattaaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactg 32643525  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 304
Target Start/End: Original strand, 34634191 - 34634219
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaa 304  Q
    |||||||||||||||||||||||||||||    
T  34634191 agttaactgtcgaggatcttctgctacaa 34634219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 56138228 - 56138376
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttga-----aattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    ||||||||||||||||||| ||||||| ||| ||| ||||  |     ||| ||| |||||||||||||  ||||||||||||||||||||||| |||||    
T  56138228 atacgattttgccccttcgacagttaactgccgagaaattaaattaaaaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgagg 56138327  T
Q  291 atcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  56138328 atcttctgctacaaatctggcagaagctctctcatccattattcatctc 56138376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 958639 - 958543
Alignment:
Q  243 cggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  958639 cggttgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatccggcagaagctctctcatccattattcttctc 958543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 44561371 - 44561279
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| |  ||||||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  44561371 tgcagttaactaccgaggaaaatctcggtagttaactgccgaggatcgtctgctacaaatctggcagaagctctctcatccattattcatctc 44561279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 1041922 - 1042056
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgcta 301  Q
    ||||||||  ||||||||||| ||| |||||||| ||||| ||  |||||||||||||  || |||| ||| ||||||||||| |||||||||||| |||    
T  1041922 ttttgcccgatcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactgccgaggatcttctacta 1042021  T
Q  302 caaatctgacagaagctctctcatccattattcat 336  Q
    |||||||| || |||||||||||| |||| |||||    
T  1042022 caaatctggcataagctctctcattcattgttcat 1042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 9889975 - 9890071
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggat 292  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||    
T  9889975 atacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 9890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 28081451 - 28081582
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatc 307  Q
    ||||||||||||||| ||| || |  || ||||| ||  |||||||||||||  ||||||| |||  ||||||| |||||||||||||||||||||||||    
T  28081451 cccttcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaatctcgttagttaagtgtcgaggatcttctgctacaaatc 28081550  T
Q  308 tgacagaagct-ctctcatccattattcatct 338  Q
    || ||||| || ||||||||||||||||||||    
T  28081551 tggcagaatctcctctcatccattattcatct 28081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 51429341 - 51429278
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  51429341 agttaactgtcgaggatcttctgctacaaatctggaagaagctctctcatccattattcatctc 51429278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 34530807 - 34530744
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  34530807 agttaactgccgaggatcttctgctacaaatttggcagaagctctctcatccattattcatctc 34530744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 39588127 - 39588190
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  39588127 agttaactgccgaggatcttctgctacaaatatggcagaagctctctcatccattattcatctc 39588190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 29700374 - 29700268
Alignment:
Q  216 cagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaa 315  Q
    ||||||| ||||||||||||  | |  ||| |||||||||||||  ||||||||||| |||||||| || ||| |||||||||||||||||||| |||||    
T  29700374 cagttaactgctgaggaattcaataaccggctgcagttaactgccgaggaaaacctcggtagttaattgccgatgatcttctgctacaaatctggcagaa 29700275  T
Q  316 gctctct 322  Q
    |||||||    
T  29700274 gctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 15995714 - 15995798
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  15995714 ccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 15995798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 19069179 - 19069263
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  19069179 ccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 19069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 42885496 - 42885575
Alignment:
Q  262 aggaaaacctcagtagttaactgtcgaggatcttctgctacaaa--tctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| | ||||||||| ||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  42885496 aggaaaacctcggcagttaactgccgatgatcttctgctacaaaaatctggcagaagctctctcatccattattcatctc 42885575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 243363 - 243296
Alignment:
Q  270 ctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatc 337  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||  |||||||||||    
T  243363 ctcagcagttaactgtcgaggatcttctgttacaaatctggcagaagctctctcactcattattcatc 243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 326
Target Start/End: Complemental strand, 4786375 - 4786296
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatc 326  Q
    ||||||||||| || ||||||||||| || |||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  4786375 tgcagttaactactgaggaaaacctcggttgttaactgccgatgatcttctgctacaaatctggtagaagctctctcatc 4786296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 34154440 - 34154377
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  34154440 agttaactgcagaggatcttctgctacaaatctggcagaagctctctcatctattattcatctc 34154377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 56304911 - 56304974
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||| || ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  56304911 agttaattgccgaggattttctgctacaaatctggcagaagctctctcatccattattcatctc 56304974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 6283479 - 6283417
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    ||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  6283479 agttaactgccgaggatcttctgcttcaaatctggccgaagctctctcatccattattcatct 6283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 41023367 - 41023461
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    |||||||||| || | | ||||||||| ||| ||| |||||||||| ||| |||||||||||||| |||||| |||| ||||||||||| |||||    
T  41023367 atacgattttacctccttggcagttaactgccgagaaatttgaaatccggctgcagttaactgctgaggaaatcctcggtagttaactgccgagg 41023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 6178160 - 6178056
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  6178160 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 6178061  T
Q  334 catct 338  Q
     ||||    
T  6178060 gatct 6178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 49094107 - 49094211
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  49094107 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 49094206  T
Q  334 catct 338  Q
     ||||    
T  49094207 gatct 49094211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 55793943 - 55794047
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| | ||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  55793943 aaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 55794042  T
Q  334 catct 338  Q
    |||||    
T  55794043 catct 55794047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 955773 - 955861
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||| ||| ||||||||| ||||||||||||  ||| |||| |||||||||||||  || |||||||| |||||||||||    
T  955773 atacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggctgcagttaactgccgagaaaaacctcggtagttaactg 955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 15999880 - 15999796
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||||||||| ||| ||| |||||||||| ||| |||| ||||||||  ||||||||||| ||||||||||| ||||||    
T  15999880 ccccctcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 15999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 37394229 - 37394292
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||||||| ||||||||||||| ||  |||||||||||||| ||| |||||||||||||    
T  37394229 atacgattttgcctcttcggcagttaactgtcgaggaatttgaaatccggatgcagttaactgc 37394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 3403840 - 3403900
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  3403840 cccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 21018054 - 21017951
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttct--gctacaaatctgacagaagct-ctctcatccattattc 334  Q
    |||| ||| |||| ||||||||  ||||||||||| | ||||||||| ||| ||||||||  |||||||||||| ||||| || |||||||| |||||||    
T  21018054 aaatccggctgcaattaactgccgaggaaaacctcggcagttaactgccgatgatcttctgagctacaaatctggcagaatctcctctcatctattattc 21017955  T
Q  335 atct 338  Q
    ||||    
T  21017954 atct 21017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 41795406 - 41795307
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  |||||||||||  |||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  41795406 aaatccggctgcagttaactgccgaggaaaacctcgttagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 41795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 50274742 - 50274804
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    |||| ||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||||    
T  50274742 tacgtttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaactgc 50274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 39588079 - 39588136
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||||  |||||||||||||    
T  39588079 ttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgc 39588136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 49572992 - 49572900
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||| ||||||||| ||| ||||||| ||  ||||||||  | | |||| |||||||||||||  ||||||||||| ||||| |||||||||    
T  49572992 atacgtttttgccccatcgacagttaactgtcgaggaattcaataatcggctgcagttaactgccgaggaaaacctcggtagtaaactgtcga 49572900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 20664088 - 20664041
Alignment:
Q  46 tatgatggatctatctttttgtataaatgctttcaaattattgtggtc 93  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||    
T  20664088 tatgatgaatccttctttttgtatgaatgctttcaaattattgtggtc 20664041  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 21022964 - 21022885
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||| || |  || ||||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  21022964 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 21022885  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 24414839 - 24414902
Alignment:
Q  219 ttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaac 282  Q
    |||| ||| ||||||||  ||| ||||||||||||||||||| || |||||||| |||||||||    
T  24414839 ttaactgccgaggaattcaaaaatcggttgcagttaactgctgagtaaaacctcggtagttaac 24414902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 19073713 - 19073659
Alignment:
Q  230 ggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||||||| ||| |||||||||||||  |||||| |||| |||||||||||    
T  19073713 ggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactg 19073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 21015761 - 21015815
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| ||| |||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  21015761 gaaatacgggtgcagttaactgctgagggaaacctcggtagttaactgccgagga 21015815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 37022118 - 37022060
Alignment:
Q  231 gaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||||||| ||||||||||| |  ||||||||||| | ||||||||| ||||    
T  37022118 gaatttgaaattcggctgcagttaactaccgaggaaaacctcggcagttaactgccgag 37022060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 39590654 - 39590572
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||| ||||||||||| ||| || |  || ||||| | | |||||||||||||  ||||||||||| |||||||||||    
T  39590654 ttttgccccctcggcagttaactgccgaagttttagaaatacagctgcagttaactgccgaggaaaacctcggtagttaactg 39590572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 49426845 - 49426792
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccatt 330  Q
    |||||| ||||| |||||||| |||||||||||| ||||||||||||||| ||||    
T  49426845 agttaattgtcggggatcttccgctacaaatctg-cagaagctctctcattcatt 49426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 51492093 - 51492147
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  51492093 gaaatccggctgcagttaactgcctaggaaaacctcggtagttaactgccgagga 51492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 16984247 - 16984158
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||| ||||||||||| ||| || |  || ||||| ||| |||||||||||||  |||||||||||  |||||||||| ||||||    
T  16984247 ttttaccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagga 16984158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 23949961 - 23949994
Alignment:
Q  300 tacaaatctgacagaagctctctcatccattatt 333  Q
    ||||||| ||||||||||||||||||||||||||    
T  23949961 tacaaatttgacagaagctctctcatccattatt 23949994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 1044607 - 1044539
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||||||| |||||||||||||| ||  || |||||||||||  || |||||||||||||  |||||||    
T  1044607 gattttgctccttcggcagttaactgtcgatgaatttgaaatctggctgcagttaactgccgaggaaaa 1044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 11287557 - 11287593
Alignment:
Q  297 tgctacaaatctgacagaagctctctcatccattatt 333  Q
    |||||||||| || |||||||||||||||||||||||    
T  11287557 tgctacaaatgtggcagaagctctctcatccattatt 11287593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 21472576 - 21472504
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||| ||||||| | ||||||||||| ||| ||||||||  ||| |||| |||||||||||||  |||||||    
T  21472576 atacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgcagttaactgccgaggaaaa 21472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 37959812 - 37959724
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| |||| |||| ||||||||||| || |||||||||| | |  | | |||||||||||||  |||||||| || |||||||||||    
T  37959812 atacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgcagttaactgccgaggaaaacatcggtagttaactg 37959724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 51426518 - 51426606
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||| || |||| ||||||| ||  ||||||||  ||| |||| ||||||||| |||  || ||||||||||||||||||||    
T  51426518 atacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggctgcagttaattgccgagaaaaacctcagtagttaactg 51426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 26451482 - 26451601
Alignment:
Q  217 agttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaag 316  Q
    |||||| |||||||||||| ||||||||| || ||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  26451482 agttaactgctgaggaattagaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaag 26451581  T
Q  317 ctctctcatccattattcat 336  Q
    |||||||||| |||||||||    
T  26451582 ctctctcatctattattcat 26451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 41858213 - 41858073
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| ||||||||||| ||  || |||||  |||  ||| |||||||||||||  |||||  |||| | ||||||||||||||||||||    
T  41858213 atacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctgcagttaactgccgaggaa--cctcgggagttaactgtcgaggatctt 41858116  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  41858115 ctgctacaaatctggcagaagctctctcatccattattcatct 41858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 18441533 - 18441390
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| ||||||||||| ||| ||| ||||  | |  || ||| ||||||||||  || |||||||| | ||||||||| ||||||||||    
T  18441533 atacgtttttgccccctcggcagttaactgccgagaaattcaataaccgattgtagttaactgccgagaaaaacctcggcagttaactgccgaggatctt 18441434  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| ||||| |||||||||||||||||||||||    
T  18441433 ctgctacaaatctggcagaaactctctcatccattattcatctc 18441390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 338
Target Start/End: Original strand, 42602457 - 42602583
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgac 311  Q
    ||||||||||| ||| || |||||  |||  ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  42602457 tcggcagttaactgccgaagaattcaaaaaccggatgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgatacaaatctgac 42602556  T
Q  312 agaagctctctcatccattattcatct 338  Q
    | ||| | |||||||||||||||||||    
T  42602557 ataagttgtctcatccattattcatct 42602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 41274625 - 41274716
Alignment:
Q  248 gcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||| |||  ||||||| ||| ||||||||||| |||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  41274625 gcagttaattgccgaggaaaatctcggtagttaactgccgagaatcttctactataaatctggcagaagctctctcatccattattcatctc 41274716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 3395927 - 3395990
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  3395927 agttaactgccgaggatcttctgctacaaatatggcagaaactctctcatccattattcatctc 3395990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 37779713 - 37779773
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  37779713 agttaactgtcgaggatattctgctacaaatctgacagaag--ctctcatccattattcatct 37779773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 1114724 - 1114818
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    |||||||||| |||| ||||||||||| ||| ||| |||||||||| ||| |||||||||||||  |||||| |||| ||||||||||| |||||    
T  1114724 atacgattttaccccctcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagg 1114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 22547504 - 22547567
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||  |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  22547504 agttaactaccgaggatcttctactacaaatctggcagaagctctctcatcaattattcatctc 22547567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 35962288 - 35962383
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||  ||||||||||| ||  |||||||||||||| ||| | |||||||||||  ||||||||||| | ||||||||| ||||||    
T  35962288 atacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgccgagga 35962383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 22577662 - 22577739
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||   ||||||||||| ||||||||||| ||||    
T  22577662 tcggcagttaattgctgaggaattcaaaaattggttgcagttaactgtcgaggaaaacctcggtagttaactgccgag 22577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 15033197 - 15033095
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctacaaatctgacagaagct-ctctcatccattattc 334  Q
    |||||||| |||| ||||||||  ||| ||||||| ||||||||||| |||||||| ||||  ||||||||||| ||||| || ||||||||||||||||    
T  15033197 aaattcggctgcaattaactgccgagggaaacctcggtagttaactgccgaggatc-tctgacctacaaatctggcagaatctcctctcatccattattc 15033099  T
Q  335 atct 338  Q
    ||||    
T  15033098 atct 15033095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 24860454 - 24860506
Alignment:
Q  287 gaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  24860454 gaggatcttctgctataaatttgacagaagctctctcatctattattcatctc 24860506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 272
Target Start/End: Original strand, 3641628 - 3641703
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctc 272  Q
    |||| ||||||||| ||| ||||||||| |||| ||||| ||| ||||| |||||||||||||| |||||||||||    
T  3641628 tacgtttttgccccctcgacagttaattactgatgaattagaacttcggctgcagttaactgctgaggaaaacctc 3641703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 20549318 - 20549263
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||    
T  20549318 ttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaact 20549263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 45454387 - 45454450
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||||||| | ||||||||||| ||| |||||||||||||| ||| |||||||||||||    
T  45454387 atacgattttgcctcctcggcagttaactgccgaggaatttgaaatccggatgcagttaactgc 45454450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 41276946 - 41276889
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||| ||||||||||| || ||||||||| ||||||||| |||||||||||||    
T  41276946 ttttgccccctcggcagttaactgttgaggaattagaaattcggctgcagttaactgc 41276889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 44052312 - 44052231
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    ||||||||| |||| |||||||||| |||||||||| ||| ||| |||||||| || |  ||||||||||| ||||||||||    
T  44052312 ttttgccccctcggtagttaattgccgaggaatttgcaatccggctgcagttacctaccgaggaaaacctcggtagttaact 44052231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 18438615 - 18438703
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||||||||||||||| || |||||||||  | |  ||| |||||||||||||  ||||||||||| | |||||||||    
T  18438615 atacgcttttgccccttcggcagttaactgttgaggaattcaataaccggctgcagttaactgccgaggaaaacctcgggagttaactg 18438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 22550945 - 22550862
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| ||| || |  || ||||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  22550945 cccttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 22550862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 35966841 - 35966746
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||||||||| ||||||||||| ||| |||||||||||||| ||  ||||||||| ||   | |||| |||| |||||||||||| |||||    
T  35966841 atacaattttgccccctcggcagttaactgccgaggaatttgaaatccgactgcagttaattgtcgaagaaatcctcggtagttaactgtagagga 35966746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 326
Target Start/End: Original strand, 38871834 - 38871884
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatc 326  Q
    ||||||||| | |||||||||||||||||||||| ||| ||||||||||||    
T  38871834 agttaactgccaaggatcttctgctacaaatctggcaggagctctctcatc 38871884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 23018720 - 23018761
Alignment:
Q  250 agttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  23018720 agttaactgccaaggaaaacctcagtagttaactgccgagga 23018761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 28646320 - 28646252
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    |||||||||||| ||||||||| ||| |||| |||||||||||||  |||||||| || | ||||||||    
T  28646320 gcagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 28650904 - 28650836
Alignment:
Q  215 gcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    |||||||||||| ||||||||| ||| |||| |||||||||||||  |||||||| || | ||||||||    
T  28650904 gcagttaattgccgaggaatttaaaaatcggctgcagttaactgccgaggaaaacttcggcagttaact 28650836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 41855349 - 41855436
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    ||||| ||||||| | ||||||||||| ||  || |||||  ||| |||| |||||||||||||  ||||||||||| ||||||||||    
T  41855349 atacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaact 41855436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 18205818 - 18205860
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||    
T  18205818 tgcagttaactgccaaggaaaacctcggtagttaactgccgag 18205860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 41743877 - 41743934
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||| |||  |||||| ||| |||||||||||||| ||| |||||||||||||    
T  41743877 ttttgccccctcgatagttaactgccgaggaatttgaaatccggctgcagttaactgc 41743934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 41016446 - 41016490
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  41016446 tgcagttaactgccgaggaaaacctcggtagttaactgccgagga 41016490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 18307235 - 18307378
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| |||||| |||||||||||||| ||  ||||||||  ||| |||| || ||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  18307235 atacgtttttgctccttcggcagttaactgtcgaggaattaaaaaatcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatctt 18307334  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  18307335 ctgctacaaatctggcagaagccctctcatccattattcatctc 18307378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 542866 - 542739
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgac 311  Q
    ||||||||||| ||  |||||||| ||||| ||| ||||| |||||||  ||||||  ||| ||||||||||| |||||||||||||||||||||||| |    
T  542866 tcggcagttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaaactctcggtagttaactgccgaggatcttctgctacaaatctggc 542767  T
Q  312 agaagctctctcatccattattcatctc 339  Q
    ||||| ||||||||||||||||||||||    
T  542766 agaagttctctcatccattattcatctc 542739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 326
Target Start/End: Original strand, 20192334 - 20192464
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||||||||||||||||| ||||||| |||||| |||||  | | |||| |||||||||||||  |||||||| ||  ||||||| || ||||||||||    
T  20192334 atacgattttgccccttcgtcagttaactgctgaagaattcaataatcggctgcagttaactgccgaggaaaacttcgatagttaaatgccgaggatctt 20192433  T
Q  296 ctgctacaaatctgacagaagctctctcatc 326  Q
    |||||||||||||| ||||||||||||||||    
T  20192434 ctgctacaaatctggcagaagctctctcatc 20192464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 11346039 - 11346132
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagct-ctctcatccattattcatctc 339  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  11346039 tgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctc 11346132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 3600369 - 3600461
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||| ||||||||||||  |||||||| | ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  3600369 tgcagttaactgccaaggaaaacctcgatagttaacagccgaggatcttctgctacaaatctgacagaagttctttcatgcattattcatctc 3600461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 25497543 - 25497635
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||  ||||||| ||| ||||||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25497543 tgcagttaactgccgaggaaaatctcggtagttaactgccgagaatcttctgctacaaatcaggcagaagctctctcatccattattcatctc 25497635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 34122505 - 34122600
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||| ||| ||||||||||| ||||||    
T  34122505 atacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgccgagga 34122600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 34124027 - 34123933
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    ||||||||||||||| ||||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||| |||||    
T  34124027 atacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagg 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 42865816 - 42865754
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42865816 agttaattgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 42865754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 41798803 - 41798894
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||| |||||||||||||  | ||||||||| ||||||| ||| ||||||    
T  41798803 gattttgccccctcggcagttaactgctgaagaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagttatctgccgagga 41798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 35564315 - 35564381
Alignment:
Q  269 cctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattca 335  Q
    |||| |||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  35564315 cctcggtagttaactgctgaggatcttctgctacaaatctggcataagctctctcatccattattca 35564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 8537215 - 8537290
Alignment:
Q  265 aaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagct-ctctcatccattattcatctc 339  Q
    |||| ||| ||||||||||| ||||||| |||||||||||||||| ||||| || |||||||||||||||||||||    
T  8537215 aaaatctcggtagttaactgccgaggatgttctgctacaaatctgccagaatctcctctcatccattattcatctc 8537290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 291
Target Start/End: Original strand, 7017514 - 7017588
Alignment:
Q  217 agttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||| |||||||||||||||||| ||| |||||||||||   |||||||||||| ||||||||||| ||||||    
T  7017514 agttaactgctgaggaatttgaaatccggctgcagttaactctcaaggaaaacctcggtagttaactgccgagga 7017588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 25897166 - 25897076
Alignment:
Q  201 attttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| |||||||||||||||| | | |||||||||||| | ||| |||||||||||||  |||||| |||| ||||||||||| ||||||    
T  25897166 attttaccccttcggcagttaactaccgaggaatttgaactccggctgcagttaactgcccaggaaatcctcggtagttaactgccgagga 25897076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 28388605 - 28388523
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||| ||||||||||  ||| |||||||||||||| | | |||||||||||||  ||||||||||| |||||||||||    
T  28388605 ttttgccccctcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactg 28388523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 39743236 - 39743154
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaac 282  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||  |||||||||||||  ||||||||||| | |||||||    
T  39743236 gattttgccccctcgacagttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcggcagttaac 39743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 338
Target Start/End: Complemental strand, 8098 - 7994
Alignment:
Q  237 gaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttct--gctacaaatctgacagaagct-ctctcatccattatt 333  Q
    ||||| |||||||||||||||||  ||||||| ||| ||||||||||  ||||||||| ||  |||||||||||| ||||| || ||| |||||||||||    
T  8098 gaaatacggttgcagttaactgccgaggaaaatctcggtagttaactaccgaggatctcctgcgctacaaatctggcagaatctcctcacatccattatt 7999  T
Q  334 catct 338  Q
    |||||    
T  7998 catct 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 18538427 - 18538334
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||||||| ||||||||||||||  ||||||||  |||  ||| |||||||||||||  |||||||| || ||||||||||| ||||    
T  18538427 atacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacttcggtagttaactgccgag 18538334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 19037520 - 19037416
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||||||||||  |||| ||||||| ||||| || |||||||||||||||    
T  19037520 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 19037421  T
Q  334 catct 338  Q
     ||||    
T  19037420 gatct 19037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 1035165 - 1035260
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||| ||||| ||||||||| | |  |||||| ||||  |||||||||| ||||||    
T  1035165 atacgattttaccccctcggcagttaactgccgaggaatttgaatttcggctgcagttaattaccgaggaaatcctcgatagttaactgccgagga 1035260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 1398591 - 1398677
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    |||||| |||||| ||||||| ||| ||||||||  | |  |||||||||||||| || |||||||||||| |||||||||||||||    
T  1398591 ttttgctccttcgacagttaactgccgaggaattcaataaccggttgcagttaacagccaaggaaaacctcggtagttaactgtcga 1398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 8702290 - 8702196
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    |||||||||||| || ||| ||||||| ||| ||||||||  ||||  |  |||||||||||||| ||||||||||| ||||||||||| |||||    
T  8702290 atacgattttgctccctcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaacctcggtagttaactgacgagg 8702196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 1397436 - 1397379
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||| ||||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  1397436 ttttgccccctcggcagttaactgctgaggaattagaaatccggctgcagttaactgc 1397379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 7762329 - 7762241
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||||||||| ||| || |  || ||||||||||||||||||||||   ||||||||||||| ||||||||| ||||||    
T  7762329 ttttgcccct-cggcagttaactgccgaagttttagaaattcggttgcagttaactgtcgaggaaaacctcaggagttaactgccgagga 7762241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 28387250 - 28387338
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||||| |||| ||| ||||||| ||| |||||||||||| | ||| ||||||||| |||  |||||| |||| |||||||||||    
T  28387250 atacgattttaccccctcgacagttaactgccgaggaatttgaattccggctgcagttaattgccgaggaaatcctcggtagttaactg 28387338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 17965830 - 17965925
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||  ||| ||||||||||||||  ||||||||  |||||||  |||||||||||||  |||||||| || |||||||| || ||||||    
T  17965830 atacgattttatcccctcggcagttaattgtcgaggaattaaaaattcgactgcagttaactgccgaggaaaacatcggtagttaattgccgagga 17965925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 25889981 - 25890070
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| || ||||| || ||| |||||||||||||| ||  ||||||||||| |  ||||||||||| ||||| ||||| ||||||    
T  25889981 ttttgccccctcagcagtaaactgccgaggaatttgaaatccgactgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 25890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 27867912 - 27867840
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||| | ||| ||||||| |||||  |||||||    
T  27867912 atacgattttaccccctcggcagttaactgccgaggaatttgaattccggctgcagtttactgccgaggaaaa 27867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 1401428 - 1401389
Alignment:
Q  300 tacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  1401428 tacaaatctagcagaagctctctcatccattattcatctc 1401389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 13568161 - 13568095
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||| |||| |||| |||||| ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  13568161 ttttaccccatcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 13568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 7757312 - 7757401
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||| ||||||| ||| || |  || ||||| ||| |||||||||||||  |||||||||||  |||||||||| ||||||    
T  7757312 ttttgccccctcgacagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgctagttaactgccgagga 7757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 25499979 - 25499894
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaa 281  Q
    ||||| ||||||||| ||||||||||| |   ||||||||  |||  ||||||| |||||||||  |||||||||| |||||||||    
T  25499979 atacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccggttgcggttaactgccgaggaaaaccttagtagttaa 25499894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 27863442 - 27863483
Alignment:
Q  228 gaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  27863442 gaggaatttgaaatccggttgcagttaactgccgaggaaaac 27863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 30708926 - 30709030
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttct--gctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||| ||||||| | ||||||||| |||||||||| |  ||||| ||||||| ||||| || |||||||||||||||    
T  30708926 aaatccggctgcagttaactgccgagggaaacctcgggagttaactgccgaggatcttatgcgctacaaaatctggcagaatctcctctcatccattatt 30709025  T
Q  334 catct 338  Q
     ||||    
T  30709026 gatct 30709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 41201760 - 41201801
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  41201760 tgcagttaactgccgaggaaaacctcggtagttaactgtcga 41201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 7021922 - 7021878
Alignment:
Q  224 tgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||||||||||||||||| ||| |||||||||||||  |||||||    
T  7021922 tgctgaggaatttgaaatccggctgcagttaactgccgaggaaaa 7021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 17966978 - 17966890
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||||| |||| ||||||||||| ||| ||| ||||  |||| ||  ||||||||||| |  ||||||| ||| |||||||||||    
T  17966978 atacgattttaccccctcggcagttaactgccgagaaattaaaaatccgactgcagttaactaccgaggaaaatctcggtagttaactg 17966890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 210 - 339
Target Start/End: Original strand, 34638136 - 34638261
Alignment:
Q  210 cttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctg 309  Q
    ||||||||||||| ||| |||||||| ||||||||||| |||||||||||  |||||||| || |||||||| ||||||||||||||||||||||||||     
T  34638136 cttcggcagttaactgccgaggaattagaaattcggtt-cagttaactgccgaggaaaacttcggtagttaattgtcgaggatcttctgctacaaatct- 34638233  T
Q  310 acagaagctctctcatccattattcatctc 339  Q
      ||||||||||||||||||||||||||||    
T  34638234 --agaagctctctcatccattattcatctc 34638261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 339
Target Start/End: Original strand, 39393050 - 39393161
Alignment:
Q  228 gaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatcc 327  Q
    |||| ||| ||||||||| || |||||||||   || |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  39393050 gaggtattagaaattcggatgtagttaactgtcgagaaaaacctcggtagttaactgtcgaggatcttctactacaaatctgatagaagctctctcatcc 39393149  T
Q  328 attattcatctc 339  Q
    ||||||||||||    
T  39393150 attattcatctc 39393161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 41500326 - 41500184
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| ||||||||| ||||||||||| |    | |||||  |||| ||| |||||||||||||  || |||||||| ||||||||||| ||||||||||    
T  41500326 atacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgaggatctt 41500227  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  41500226 ctgctacaaatctggcataagctctctcatccattattcatct 41500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 24512148 - 24512291
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| |||| |||| ||| ||||||| || |||||||||  |||  | | ||||||||| |||  |  |||||||| ||||||||||| ||||||||||    
T  24512148 atacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctgcagttaattgccgaaaaaaacctcggtagttaactgccgaggatctt 24512247  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  24512248 ctgctacaaatctggcagaagctctctcatccattattcatctc 24512291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 339
Target Start/End: Complemental strand, 2920537 - 2920465
Alignment:
Q  267 aacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2920537 aacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 2920465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 27276466 - 27276371
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||  ||||||||||| | |||||| || ||||||    
T  27276466 atacgattttaccccctcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaattgccgagga 27276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 43491110 - 43491233
Alignment:
Q  216 cagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaa 315  Q
    ||||||| ||| ||||||||| | |  ||| |||| |||||||   ||||||||||  ||||||||||| |||| |||||||| || ||||||| |||||    
T  43491110 cagttaactgccgaggaatttaataaccggctgcaattaactgtcgaggaaaaccttggtagttaactgccgagaatcttctgttataaatctggcagaa 43491209  T
Q  316 gctctctcatccattattcatctc 339  Q
    ||||||||||||||||||||||||    
T  43491210 gctctctcatccattattcatctc 43491233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 339
Target Start/End: Original strand, 2648152 - 2648241
Alignment:
Q  250 agttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||  ||||||| ||| |||||||| || ||| |||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  2648152 agttaactgccgaggaaaatctcggtagttaattgccgatgatcttctgctacaaatctggcagaaactctctcatcaattattcatctc 2648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 10365830 - 10365746
Alignment:
Q  250 agttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattc 334  Q
    ||||||||||  ||||||||||  |||||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||    
T  10365830 agttaactgccgaggaaaaccttggtagttaaatgccgaggatcttttgctacaaatctggcataagctctctcatccattattc 10365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 29093869 - 29093780
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||  ||||||||||  | ||||||||| |||||||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  29093869 tgcagttaattgccgaggaaaaccttggcagttaactgccgaggatcttctgctacaaatctggcagaagctctctca---attattcatctc 29093780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 40679608 - 40679546
Alignment:
Q  277 gttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  40679608 gttaactgccgaggatcttctgctacaaatctggaagaacctctctcatccattattcatctc 40679546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 26858175 - 26858237
Alignment:
Q  277 gttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||    
T  26858175 gttaactgccgaggatcttctgctacaaatgtgacagaaattctctcatcaattattcatctc 26858237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 1096576 - 1096649
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||||||||||||| ||||| ||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||    
T  1096576 atacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 1096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 1149453 - 1149529
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctc 272  Q
    |||||||||||| || ||||||||||| ||| |||||||||||||| || |||||||||||||   |||||||||||    
T  1149453 atacgattttgctccctcggcagttaactgccgaggaatttgaaatccgattgcagttaactgtcgaggaaaacctc 1149529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 2917664 - 2917756
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||| ||||||||| ||||||||||| ||| ||| ||||  |||  ||| | |||||||||||  |||||||||||||||||||||||||||    
T  2917664 atacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggctacagttaactgccgaggaaaacctcagtagttaactgtcga 2917756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 16580547 - 16580610
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||| |||| ||||| |||||||||||||||| || ||| ||||||||||||||||||||||    
T  16580547 agttaattgtcaaggattttctgctacaaatctggcaaaagttctctcatccattattcatctc 16580610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 25184921 - 25184827
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| ||||||||| || |||||||| ||  |||||||||||||  ||| |||||||||||||  ||||||||||| ||||||||||| ||||||    
T  25184921 atacgtttttgccccctcagcagttaactgtcgaggaatttgaaac-cggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 25184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 17424155 - 17424216
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgc 299  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||    
T  17424155 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgc 17424216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 19187315 - 19187222
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||||||| ||||||||||| ||| ||| ||||  |||| | |||||||||| ||||  ||||||||||| ||||||||||| ||||    
T  19187315 atacgtttttgccccctcggcagttaactgccgagaaattcaaaatccagttgcagttacctgccgaggaaaacctcggtagttaactgccgag 19187222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 29397897 - 29397986
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||  ||| ||||||||||||||| |||| ||||| ||  |||||||||||||  ||||||||||| | ||||||||| ||||||    
T  29397897 ttttgccctatcgacagttaattgctgagaaattagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgccgagga 29397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 288
Target Start/End: Original strand, 30271066 - 30271147
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||||||| ||||||  | |||||||||  |||| ||| |||||||||||||| |||||||| || |||||||||||||||    
T  30271066 ccccttcggtagttaaaggttgaggaattaaaaatccggctgcagttaactgctgaggaaaacttcggtagttaactgtcga 30271147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 43982222 - 43982326
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| |||||| ||||||  |||| ||||||| ||||| || |||||||||||||||    
T  43982222 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattatt 43982321  T
Q  334 catct 338  Q
     ||||    
T  43982322 gatct 43982326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 35490741 - 35490793
Alignment:
Q  250 agttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctac 302  Q
    ||||||||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  35490741 agttaactgccgaggaaaacctcggtagttaactatcgaggatcttctgctac 35490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 45137525 - 45137437
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||||||| | | ||||||||||||| ||||||||  |||||||| |||||||||||||  | |||||| ||  ||||||||||    
T  45137525 atacgattttgcctccttggcagttaattgccgaggaattaaaaattcggctgcagttaactgccgatgaaaacttcgatagttaactg 45137437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 3795334 - 3795413
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||  |||||||||||||| ||| |||||||||||||  ||||||||||  | ||||||||| ||||||    
T  3795334 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgagga 3795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 20951126 - 20951075
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||||||||| ||| |||||||||||||| ||| |||||||||||||    
T  20951126 cccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 20951075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 291
Target Start/End: Original strand, 23346773 - 23346856
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| ||| || |  ||  |||| ||| ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  23346773 cccttcggcagttaactgccgaagttttataaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 23346856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 45475421 - 45475508
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||  |||  ||| | |||||||||||  ||||||||||| ||||||||||    
T  45475421 atacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggctacagttaactgccgaggaaaacctcggtagttaact 45475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 38945754 - 38945815
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  38945754 ccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 3803619 - 3803572
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||    
T  3803619 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgc 3803572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 24754084 - 24754021
Alignment:
Q  228 gaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||||||||||| ||||||||||| |  ||||||||||| ||| | ||||| ||||||    
T  24754084 gaggaatttgaaattcggctgcagttaactaccgaggaaaacctcggtaataaactgccgagga 24754021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 34639400 - 34639313
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||| ||||||| ||| ||| ||| ||||  |||| ||| |||||||||||||| |||||||| || | ||||||||| ||||    
T  34639400 ttttgccccctcggcaggtaactgccgagaaattaaaaatccggctgcagttaactgctgaggaaaacatcgggagttaactgccgag 34639313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 7190041 - 7189948
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| |||||||||| |||||||||| ||| || |  || ||||| ||| |||||||||||||  |||||||| || ||||||||||| ||||||    
T  7190041 tacgtttttgcccct-cggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 7189948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 274
Target Start/End: Original strand, 19186728 - 19186806
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcag 274  Q
    ||||| |||| |||| |||||||| || ||| ||| ||||  |||  ||| ||||||||||||||||||||||||||||    
T  19186728 atacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgcagttaactgctaaggaaaacctcag 19186806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 34921800 - 34921758
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||    
T  34921800 tgcagttaactgctgaggaaaacctcggtagttaactgccgag 34921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 36255007 - 36255061
Alignment:
Q  205 tgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||| ||| |||||||||| ||||||||| ||| |||| |||||||||||||    
T  36255007 tgcccctgcggaagttaattgccgaggaatttaaaaatcggctgcagttaactgc 36255061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 3937902 - 3937798
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| |||||||||||||  ||| ||||||| | ||||||||| |||||| ||||||  |||| ||||||| ||||| || |||||||||||||||    
T  3937902 aaatccggctgcagttaactgccgaggtaaacctcggaagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattatt 3937803  T
Q  334 catct 338  Q
     ||||    
T  3937802 gatct 3937798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 1101140 - 1101072
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||||||| || ||||||||||| ||| || ||||||||||| ||| || ||||||||||  |||||||    
T  1101140 gattttgctccctcggcagttaactgccgatgaatttgaaatccggctgtagttaactgccgaggaaaa 1101072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 41009018 - 41008927
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||| ||||||| | ||||||||||| ||| |||||||||| ||  ||| |||| ||||||||  |||||||| || ||||||||||| ||||    
T  41009018 tacgtttttgcctcctcggcagttaactgccgaggaatttgtaa-ccggctgcatttaactgccgaggaaaacttcggtagttaactgccgag 41008927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 339
Target Start/End: Complemental strand, 12466 - 12336
Alignment:
Q  210 cttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctg 309  Q
    ||||||||||||| ||| || |  || ||||| ||| |||||||||||||  | ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  12466 cttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgatgaaaacctcggtagttaactgccgaggatcttctgctacaaatctg 12367  T
Q  310 acagaagct-ctctcatccattattcatctc 339  Q
     ||||| || |||||||||||||||||||||    
T  12366 gcagaatctactctcatccattattcatctc 12336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 29763242 - 29763168
Alignment:
Q  265 aaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29763242 aaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 29763168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 6434775 - 6434872
Alignment:
Q  242 tcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||| |||||||| |||||||||||||| || ||||||||||| | ||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  6434775 tcggctgcagttatctgctaaggaaaacttcggtagttaactgccaaggatcttctgctacaaatctggtagaagcactctcatccattattcatctc 6434872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 339
Target Start/End: Original strand, 13972045 - 13972186
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatctt 295  Q
    ||||| |||||||||||||||||||| | || ||||||||  ||| | || |||||||||| ||  ||||||||||| ||| | ||| | ||||||||||    
T  13972045 atacgtttttgccccttcggcagttact-gccgaggaattaaaaact-ggctgcagttaacagccgaggaaaacctcggtattaaacagccgaggatctt 13972142  T
Q  296 ctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  13972143 ctgctacaaatctggcagaagctctctcatctattattcatctc 13972186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 42572776 - 42572706
Alignment:
Q  269 cctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42572776 cctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 42572706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 27487678 - 27487615
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27487678 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 27487615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 6562253 - 6562158
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||| |||| ||||||||||| ||||||    
T  6562253 atacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 6562158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 14174923 - 14174860
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14174923 agttaactgccgaggatcttctgctaaaaatctggcagaagctctctcatccattattcatctc 14174860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 49927513 - 49927451
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49927513 agttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 49927451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 19159646 - 19159750
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttct--gctac-aaatctgacagaagct-ctctcatccattatt 333  Q
    |||| ||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||  ||||| ||||||| ||||| || |||||||||||||||    
T  19159646 aaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggatcttctgcgctacaaaatctggcagaatctcctctcatccattatt 19159745  T
Q  334 catct 338  Q
    |||||    
T  19159746 catct 19159750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 23359435 - 23359346
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||| |  ||||||||||| ||||| ||||| ||||||    
T  23359435 ttttgccccctcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 23359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 26637258 - 26637205
Alignment:
Q  286 cgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26637258 cgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctc 26637205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 13147528 - 13147620
Alignment:
Q  247 tgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||| |  |||||||||||   ||||||||||||| ||||||||||||||||||||  | || |||||||||||||||||||||||    
T  13147528 tgcagttaactaccgaggaaaacctcgacagttaactgtcgatgatcttctgctacaaatctggtaaaaactctctcatccattattcatctc 13147620  T

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Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 9711743 - 9711648
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||||||| || |||||||| ||| |||||||| ||||| |||| ||||||||||||  ||||||||||| | ||||||||| ||||||    
T  9711743 atacgattttgccccatcagcagttaactgccgaggaattagaaatccggtcgcagttaactgccgaggaaaacctcgggagttaactgccgagga 9711648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 333
Target Start/End: Complemental strand, 24364803 - 24364680
Alignment:
Q  210 cttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctg 309  Q
    ||||||||||||| ||| |||||  || ||| |||||||||||||||| || |||||||||||   ||||||||| ||| |  ||  |||||||||||||    
T  24364803 cttcggcagttaactgccgaggaggtttaaaatcggttgcagttaactactgaggaaaacctcgacagttaactgccgatgcgctcttgctacaaatctg 24364704  T
Q  310 acagaagctctctcatccattatt 333  Q
     ||||||||||| |||||||||||    
T  24364703 gcagaagctctcacatccattatt 24364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 6557907 - 6557989
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||| ||||||||||| ||| |||||||||||||||||| |||||||||||||  ||||||| ||| ||||||||||| ||||    
T  6557907 ccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgccgag 6557989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 339
Target Start/End: Complemental strand, 29709354 - 29709260
Alignment:
Q  245 gttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||||||| | || |||| |||| |||||||||||| | |||||| ||||| ||||||  |||||||||| ||||||||||||||||||    
T  29709354 gttgcagttaactgatgagaaaaatctcaatagttaactgtcaaagatcttttgctataaatctagcagaagctctttcatccattattcatctc 29709260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 52802117 - 52802199
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||  ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| |||||||||||    
T  52802117 ttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactg 52802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 326
Target Start/End: Original strand, 49395657 - 49395714
Alignment:
Q  269 cctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatc 326  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  49395657 cctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 49395714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 41804125 - 41804033
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcga 288  Q
    ||||| ||||||||||||||||||||| ||| ||||||||  |||  ||  |||||||||||||  ||||||||||| |||||||||||||||    
T  41804125 atacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactgcagttaactgccgaggaaaacctcggtagttaactgtcga 41804033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 44470087 - 44470008
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||  ||||||||||| | ||||||||| ||||||    
T  44470087 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 44470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 11183187 - 11183261
Alignment:
Q  216 cagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagg 290  Q
    ||||||| ||||||||||||  |||| ||| |||||||||||||  ||||||||||| |||||||||||||||||    
T  11183187 cagttaactgctgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagg 11183261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 49426750 - 49426812
Alignment:
Q  278 ttaactgtcgaggatcttctgctacaaatctgacagaagct-ctctcatccattattcatctc 339  Q
    ||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  49426750 ttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctc 49426812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 19499202 - 19499116
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||  ||| ||||||| ||||||| ||||| |||||||| |||||||||||||  |||||||||||||| ||||||||    
T  19499202 atacgtttttgccc--tcgacagttaactgctgagaaatttaaaattcggctgcagttaactgccgaggaaaacctcagtcgttaactg 19499116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 44336242 - 44336323
Alignment:
Q  208 cccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||| |||||||| ||  |||||||| ||||||||| |||||||||||||  ||||||||||| ||||||||||| ||||    
T  44336242 cccttcagcagttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 44336323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 4208454 - 4208502
Alignment:
Q  288 aggatcttctgctacaaatctgacagaagctctctcatccattattcat 336  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4208454 aggatcttctgctacaaatctaccagaagctctctcatccattattcat 4208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 23276200 - 23276112
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||| ||||||||||| ||||||||||||  |||| ||| | |||||||||||  |||||||||||  ||||||||||    
T  23276200 atacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggctacagttaactgccgaggaaaacctcgatagttaactg 23276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 51290048 - 51289968
Alignment:
Q  200 gattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagtta 280  Q
    |||||| |||| ||||||||||| | ||||||||||  |||| |||||||||||||||||  ||||||||||| |||||||    
T  51290048 gattttaccccctcggcagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcggtagtta 51289968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 15047279 - 15047358
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||  |||| ||||||||||| ||||||    
T  15047279 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactgccgagga 15047358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 44596896 - 44596959
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||||||  ||| |||||||||||||||| || ||||| |||||||||||||||||||||||    
T  44596896 agttaactgctgagtatcttctgctacaaatttggcagaaactctctcatccattattcatctc 44596959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 46973185 - 46973277
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||||||||||||| | ||||||||| ||| ||||||||  |||  ||| |||||||||||||  |||||||||||| |||||||||| ||||    
T  46973185 atacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctca-tagttaactgccgag 46973277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 51269009 - 51269062
Alignment:
Q  286 cgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||||||||||    
T  51269009 cgaggatcttctgctacaaatttagcagaagctctctcattcattattcatctc 51269062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 339
Target Start/End: Original strand, 29435025 - 29435096
Alignment:
Q  267 aacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    |||||| |||||||||||  |||||| || |||||||||| || |||||| ||||||||||||||||||||||    
T  29435025 aacctcggtagttaactgcagaggatttt-tgctacaaatttggcagaagttctctcatccattattcatctc 29435096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 5077922 - 5077985
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||| ||  |||||||||||||    
T  5077922 atacgattttaccccctcggcagttaactgctgagaaatttgaaatccgactgcagttaactgc 5077985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 38689913 - 38690007
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||| |||| |||| |||| |||||| ||  |||||||| ||||  ||| ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  38689913 atacgcttttaccccctcggtagttaaatgtcgaggaattcgaaac-cggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 38690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 48751502 - 48751407
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| |||||| | || ||| ||||||||  |||| ||| ||||||||| |||  ||||||||||| ||||||||||| ||||||    
T  48751502 atacgattttaccccctcggcactgaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 48751407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 50113306 - 50113381
Alignment:
Q  214 ggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||||||||| ||||||||||||| ||||| || |||||| |||  ||||||| ||| ||||||||||| ||||    
T  50113306 ggcagttaattggtgaggaatttgaatttcggctgtagttaattgccgaggaaaatctcggtagttaactgccgag 50113381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 8460156 - 8460096
Alignment:
Q  228 gaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||||||||||||| ||| ||||||||||||| |||||||| ||| ||||||||||| ||||    
T  8460156 gaggaatttgaaat-cggctgcagttaactgccaaggaaaatctcggtagttaactgccgag 8460096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 13178224 - 13178131
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| |||||| || ||||||||||| ||||||| ||||| |||  | | |||||||||||||| |||||||||||   ||||||||| ||||    
T  13178224 atacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgcagttaactgctgaggaaaacctcgagagttaactgccgag 13178131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 13636172 - 13636111
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgc 299  Q
    |||| ||| |||||||||||||  ||||||||||| ||||||||||| ||||||||| ||||    
T  13636172 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 13636111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 29261395 - 29261488
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    ||||| ||||||| | ||||||||||| ||  ||| ||||  ||| |||| |||| ||||||||  | ||||||||||||||||||||||||||    
T  29261395 atacgtttttgcctcctcggcagttaactgtagagaaattgtaaaatcggctgcaattaactgccgaagaaaacctcagtagttaactgtcgag 29261488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 269
Target Start/End: Complemental strand, 51666730 - 51666658
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||| ||||||||| ||||||||||| ||| ||| |||| |||| |||| |||||||||||||| ||||||||    
T  51666730 atacgcttttgccccctcggcagttaaatgccgagtaattcgaaa-tcggctgcagttaactgctgaggaaaac 51666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 36908641 - 36908698
Alignment:
Q  286 cgaggatcttctgctacaaatctgacagaagctctc----tcatccattattcatctc 339  Q
    |||||| ||||||||||||||||| |||||||||||    ||||||||||||||||||    
T  36908641 cgaggagcttctgctacaaatctggcagaagctctctcattcatccattattcatctc 36908698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 284
Target Start/End: Original strand, 46141763 - 46141851
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||||||||  ||||||||||| ||| ||||||||  | |  ||| |||||||||||||  |||||||| || |||||||||||    
T  46141763 atacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcagttaactgccgaggaaaacatcggtagttaactg 46141851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 19054296 - 19054249
Alignment:
Q  242 tcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgag 289  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| ||||    
T  19054296 tcggctgcagttaactgccaaggaaaacctcggtagttaactgccgag 19054249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 23913838 - 23913909
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaa 267  Q
    |||||||||| |||| || |||||||| | | |||||||||||| | ||| |||||||||||||| ||||||    
T  23913838 atacgattttaccccctcagcagttaactaccgaggaatttgaattccggctgcagttaactgctgaggaaa 23913909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 30905752 - 30905815
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||||  ||| ||||||||||| ||| ||| |||||||||| ||| |||||||||||||    
T  30905752 atacgattttatcccctcggcagttaactgccgagaaatttgaaatccggctgcagttaactgc 30905815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 339
Target Start/End: Original strand, 41779739 - 41779803
Alignment:
Q  269 cctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||| ||||||| ||||||||||||||      ||||||  |||||||||||||||||||||||||||||    
T  41779739 cctcaatagttaattgtcgaggatcttc------aaatctagcagaagctctctcatccattattcatctc 41779803  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 12643272 - 12643310
Alignment:
Q  231 gaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  12643272 gaatttgaaattcggctgcagttaactgctgaggaaaac 12643310  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 29352255 - 29352313
Alignment:
Q  211 ttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    |||||||||||||||  |||||||||||||| ||| | |||||||||||  ||||||||    
T  29352255 ttcggcagttaattgtcgaggaatttgaaatccggctccagttaactgccgaggaaaac 29352313  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 30910084 - 30910022
Alignment:
Q  207 ccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaac 269  Q
    |||| ||||||||||| ||  |||||||||||||| ||| |||||||||||||  ||||||||    
T  30910084 ccccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaac 30910022  T

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Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 26633555 - 26633596
Alignment:
Q  243 cggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    |||||||||||||||||  ||||||||||| |||||||||||    
T  26633555 cggttgcagttaactgccgaggaaaacctcggtagttaactg 26633596  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 35527051 - 35526984
Alignment:
Q  276 agttaactgtcgaggatcttctgctac--aaatctgacagaagctc--tctcatccattattcatctc 339  Q
    |||||||||| ||||||||||||||||  |||| || ||||| |||  ||||||||||||||||||||    
T  35527051 agttaactgtagaggatcttctgctacaaaaatatggcagaacctctatctcatccattattcatctc 35526984  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 51288874 - 51288931
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgc 259  Q
    ||||||||| ||||||||||| | | |||||||| ||||| ||| |||||||||||||    
T  51288874 ttttgccccctcggcagttaactaccgaggaattagaaatccggctgcagttaactgc 51288931  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 18975212 - 18975124
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||| ||||||||| ||||| ||||| ||  ||||||||| | |   ||||||||||||||||  |||||||| || |||||||||||    
T  18975212 atacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttgcagttaactgcagaggaaaacttcggtagttaactg 18975124  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 19161888 - 19161968
Alignment:
Q  211 ttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||||| ||| || |  || ||||| ||| |||||||||||||  ||||||||||| | ||||||||| ||||||    
T  19161888 ttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 19161968  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 20349454 - 20349510
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||||||||| | | |||||||||||||| ||| |||||||||||||  |||||||    
T  20349454 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 20349510  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 41453835 - 41453891
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||| |||||| ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  41453835 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 41453891  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 44338264 - 44338216
Alignment:
Q  290 gatcttctgctacaaatctgacagaagctctctcatccattattcatct 338  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||||||    
T  44338264 gatcttctgctacaaatctatcataagttctctcatctattattcatct 44338216  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 44465577 - 44465649
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    |||||||||| |||| ||||||||||| | | |||||||||||| | ||| ||||||| |||||  |||||||    
T  44465577 atacgattttaccccctcggcagttaactaccgaggaatttgaattccggctgcagtttactgccgaggaaaa 44465649  T

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Target: scaffold0192 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 18943 - 18848
Alignment:
Q  244 ggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||||||||||  |||    |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  18943 ggttgcagttaactgccgaggctttcctcggtagttaactgtcgaggatcttctgctacaaatctggcagaagctttctcatccattattcatctc 18848  T

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Target: scaffold0201 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 22390 - 22479
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  22390 ttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgctgaggaaaatctcggtagttaactgccgagga 22479  T

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Target: scaffold0494 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 812 - 907
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| ||||||||||| |||  ||||||||||||||||| || ||||||||||  ||||||||||| ||||||||||| ||||||    
T  812 atacgattttaccccctcggcagttaactgcctaggaatttgaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgagga 907  T

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Target: scaffold0341 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 17443 - 17348
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||| |||| ||||||||||| ||||||    
T  17443 atacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 17348  T

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Target: scaffold0176 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 857 - 920
Alignment:
Q  276 agttaactgtcgaggatcttctgctacaaatctgacagaagctctctcatccattattcatctc 339  Q
    ||||||||| |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||    
T  857 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctc 920  T

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Target: scaffold0513 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 8196 - 8268
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactg 284  Q
    ||||||||||| |||  ||||||||||||| ||| |||||||||||||| | ||||||||| |||||||||||    
T  8196 tcggcagttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaaaacctcggtagttaactg 8268  T

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Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 16040 - 15960
Alignment:
Q  203 tttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaact 283  Q
    ||||| || ||||||||||| ||| |||||||||||||| | | |||||||||||||  ||||||||||| ||||||||||    
T  16040 tttgctccctcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaact 15960  T

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Target: scaffold0116; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 11282 - 11343
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaact 257  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||| | ||| |||||||||||    
T  11282 atacgattttaccccctcggcagttaactgccgaggaatttgaattccggctgcagttaact 11343  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 4492 - 4397
Alignment:
Q  196 atacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||||||||| | || ||||||||||| ||| |||||||||||| | ||| ||||||||| | |  |||||| |||| ||||||||||| ||||||    
T  4492 atacgattttactccctcggcagttaactgccgaggaatttgaactccggctgcagttaaataccgaggaaatcctcggtagttaactgccgagga 4397  T

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Target: scaffold0618 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 3872 - 3951
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaa 281  Q
    ||||| ||| ||||||||||| ||  ||||||||  ||| |||| |||||||||||||  ||||||||||| ||||||||    
T  3872 ttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 3951  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 36584 - 36486
Alignment:
Q  238 aaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgaggatcttctg--ctac-aaatctgacagaagct-ctctcatccattat 332  Q
    |||| ||| |||| ||||||||  ||||||||||| ||||||||||| ||||||||| |||  |||| ||||||| ||||| || ||||||||||||||    
T  36584 aaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggatctcctgccctacaaaatctggcagaatctcctctcatccattat 36486  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 232892 - 232829
Alignment:
Q  228 gaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    ||||||||  |||||||| |||| ||||||||  ||||||||||| ||||||||||| ||||||    
T  232892 gaggaattaaaaattcggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 232829  T

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Target: scaffold0388 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 11796 - 11738
Alignment:
Q  202 ttttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgct 260  Q
    ||||||||||||||||||||| |||||| |||||  |||  ||| ||||||||||||||    
T  11796 ttttgccccttcggcagttaactgctgaagaattcaaaaaccggctgcagttaactgct 11738  T

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Target: scaffold0340 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 1271 - 1178
Alignment:
Q  197 tacgattttgccccttcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaacctcagtagttaactgtcgagga 291  Q
    |||| ||||| ||| ||||||||||| ||| |||||||||||||  |||  ||| ||||||||  ||||||||||| | ||||||||| ||||||    
T  1271 tacgtttttgtcccctcggcagttaactgccgaggaatttgaaa-ccggcagcaattaactgccgaggaaaacctcggaagttaactgccgagga 1178  T

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Target: scaffold0260 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 11777 - 11833
Alignment:
Q  212 tcggcagttaattgctgaggaatttgaaattcggttgcagttaactgctaaggaaaa 268  Q
    ||||||||||| | | |||||||||||||| ||| |||||||||||||  |||||||    
T  11777 tcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 11833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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