View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5290_low_48 (Length: 249)
Name: NF5290_low_48
Description: NF5290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5290_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 26883995 - 26884121
Alignment:
| Q |
105 |
attaggatcatatgaactcctagatttggacccattttcaactaagggaaaaaggccaaaataccaggaccatggttcttgttgttcaaggaacaaatcc |
204 |
Q |
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| T |
26883995 |
attaggatcatatgaactcctagatttggacccattttcaactaagggaaaaaggccaaaataccaggaccatggttcttgttgctcaaggaacaaatcc |
26884094 |
T |
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| Q |
205 |
tctggaacacaaatcgctccatgagca |
231 |
Q |
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| T |
26884095 |
tctggaacacaaatcgctccatgagca |
26884121 |
T |
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