View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5291R-Insertion-1 (Length: 995)

Name: NF5291R-Insertion-1
Description: NF5291R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5291R-Insertion-1
NF5291R-Insertion-1
[»] chr5 (76 HSPs)
chr5 (257-732)||(31636965-31637440)
chr5 (726-991)||(31636677-31636939)
chr5 (9-164)||(31637544-31637699)
chr5 (499-689)||(28625459-28625649)
chr5 (500-686)||(41059708-41059895)
chr5 (531-690)||(1868861-1869012)
chr5 (532-690)||(40452392-40452548)
chr5 (531-697)||(41534638-41534806)
chr5 (531-683)||(42852037-42852185)
chr5 (500-690)||(40696981-40697177)
chr5 (531-690)||(29922104-29922260)
chr5 (531-690)||(12467279-12467439)
chr5 (531-660)||(13060547-13060673)
chr5 (531-680)||(24030230-24030375)
chr5 (531-660)||(17657257-17657383)
chr5 (539-690)||(5559834-5559985)
chr5 (531-679)||(6144753-6144898)
chr5 (533-690)||(35536859-35537015)
chr5 (531-690)||(1576646-1576802)
chr5 (531-690)||(1608013-1608169)
chr5 (531-690)||(10537141-10537290)
chr5 (550-685)||(2577348-2577481)
chr5 (546-660)||(41419531-41419642)
chr5 (499-634)||(42706775-42706919)
chr5 (531-660)||(7364254-7364380)
chr5 (531-686)||(11912021-11912173)
chr5 (531-605)||(1473371-1473445)
chr5 (531-690)||(22201846-22202007)
chr5 (495-690)||(1942985-1943166)
chr5 (531-632)||(12986988-12987085)
chr5 (531-698)||(11706818-11706989)
chr5 (531-684)||(14243838-14243990)
chr5 (531-690)||(2878591-2878747)
chr5 (531-679)||(40152802-40152947)
chr5 (540-679)||(29659084-29659220)
chr5 (531-684)||(3977490-3977638)
chr5 (554-690)||(39154676-39154809)
chr5 (531-690)||(6125302-6125457)
chr5 (520-667)||(13625458-13625607)
chr5 (524-633)||(23087752-23087859)
chr5 (540-679)||(29418678-29418814)
chr5 (531-679)||(38461206-38461353)
chr5 (539-660)||(28357164-28357282)
chr5 (614-690)||(41125768-41125845)
chr5 (531-615)||(15122560-15122643)
chr5 (540-633)||(43319027-43319116)
chr5 (522-576)||(6150383-6150437)
chr5 (543-665)||(15414019-15414138)
chr5 (532-604)||(18602618-18602691)
chr5 (531-579)||(43268644-43268692)
chr5 (548-690)||(27805947-27806087)
chr5 (531-601)||(342005-342075)
chr5 (532-690)||(11163197-11163339)
chr5 (542-660)||(28357378-28357493)
chr5 (541-679)||(29657981-29658115)
chr5 (531-596)||(3520509-3520573)
chr5 (531-580)||(17128293-17128342)
chr5 (614-690)||(35083333-35083410)
chr5 (531-615)||(11991320-11991403)
chr5 (546-697)||(7364075-7364218)
chr5 (646-689)||(42558633-42558676)
chr5 (538-580)||(2670097-2670139)
chr5 (543-609)||(42808878-42808944)
chr5 (531-576)||(43265967-43266012)
chr5 (531-605)||(7110984-7111054)
chr5 (623-690)||(13739332-13739400)
chr5 (646-690)||(17128250-17128294)
chr5 (646-698)||(22573766-22573818)
chr5 (646-690)||(41125676-41125720)
chr5 (582-690)||(6150858-6150962)
chr5 (534-634)||(7984123-7984219)
chr5 (620-690)||(17868119-17868190)
chr5 (535-590)||(32508151-32508206)
chr5 (568-677)||(9477388-9477494)
chr5 (534-586)||(17868192-17868245)
chr5 (548-609)||(19840058-19840119)
[»] chr4 (89 HSPs)
chr4 (507-697)||(48591332-48591523)
chr4 (539-690)||(17222852-17223000)
chr4 (531-698)||(29877654-29877820)
chr4 (502-690)||(36740886-36741075)
chr4 (499-690)||(7148751-7148942)
chr4 (531-683)||(23297453-23297599)
chr4 (531-690)||(28074380-28074535)
chr4 (531-699)||(38345729-38345892)
chr4 (502-690)||(488299-488488)
chr4 (531-690)||(12495559-12495717)
chr4 (531-677)||(41228918-41229061)
chr4 (520-690)||(23335642-23335813)
chr4 (536-679)||(18630821-18630961)
chr4 (531-690)||(42611783-42611939)
chr4 (531-697)||(32628793-32628956)
chr4 (531-686)||(896985-897137)
chr4 (531-689)||(18424194-18424348)
chr4 (549-690)||(28663606-28663743)
chr4 (544-690)||(36254951-36255094)
chr4 (531-690)||(948087-948246)
chr4 (532-674)||(46704201-46704340)
chr4 (501-608)||(52274114-52274225)
chr4 (544-677)||(2702643-2702773)
chr4 (533-601)||(35124404-35124472)
chr4 (540-687)||(35405708-35405851)
chr4 (531-690)||(30956697-30956855)
chr4 (566-680)||(22273830-22273941)
chr4 (543-677)||(22397233-22397364)
chr4 (531-606)||(43699477-43699554)
chr4 (531-615)||(8057075-8057159)
chr4 (539-598)||(212952-213011)
chr4 (532-615)||(7206573-7206656)
chr4 (608-690)||(42153077-42153160)
chr4 (501-660)||(825663-825823)
chr4 (531-604)||(39932752-39932825)
chr4 (539-606)||(21216324-21216391)
chr4 (531-602)||(45018548-45018619)
chr4 (539-608)||(1374356-1374426)
chr4 (531-609)||(27368145-27368223)
chr4 (553-660)||(40699393-40699501)
chr4 (531-609)||(43983375-43983453)
chr4 (618-690)||(48667768-48667841)
chr4 (533-605)||(2405205-2405276)
chr4 (531-679)||(2547973-2548118)
chr4 (531-615)||(4603319-4603402)
chr4 (531-679)||(47202841-47202985)
chr4 (535-640)||(55638047-55638148)
chr4 (520-660)||(8601201-8601342)
chr4 (531-640)||(43415254-43415360)
chr4 (569-667)||(11256599-11256693)
chr4 (545-640)||(33533957-33534048)
chr4 (533-606)||(2494396-2494469)
chr4 (531-580)||(3564235-3564284)
chr4 (531-580)||(4331352-4331401)
chr4 (531-633)||(15184562-15184659)
chr4 (537-689)||(29997228-29997375)
chr4 (573-678)||(31022457-31022559)
chr4 (588-689)||(34526253-34526351)
chr4 (531-679)||(52700469-52700615)
chr4 (560-684)||(2330394-2330515)
chr4 (540-677)||(26206283-26206416)
chr4 (495-552)||(28663403-28663464)
chr4 (543-615)||(39931531-39931602)
chr4 (620-690)||(3564306-3564377)
chr4 (539-614)||(18258033-18258107)
chr4 (531-582)||(29615389-29615440)
chr4 (647-698)||(35124351-35124402)
chr4 (495-606)||(2141616-2141731)
chr4 (531-609)||(35010226-35010304)
chr4 (531-665)||(46650286-46650420)
chr4 (588-690)||(48687006-48687104)
chr4 (646-699)||(1374433-1374486)
chr4 (531-576)||(48686964-48687009)
chr4 (531-579)||(8130503-8130551)
chr4 (539-615)||(19725316-19725392)
chr4 (539-679)||(22117377-22117513)
chr4 (646-690)||(23297410-23297454)
chr4 (646-690)||(40699328-40699372)
chr4 (646-690)||(43699553-43699597)
chr4 (531-607)||(46175974-46176049)
chr4 (539-678)||(42617157-42617292)
chr4 (539-609)||(10046255-10046325)
chr4 (531-605)||(10794907-10794980)
chr4 (531-605)||(43740073-43740146)
chr4 (534-579)||(11298611-11298656)
chr4 (568-660)||(34633445-34633531)
chr4 (614-690)||(41071444-41071521)
chr4 (550-603)||(48238135-48238188)
chr4 (576-689)||(48721880-48721990)
[»] chr1 (74 HSPs)
chr1 (502-690)||(48819281-48819470)
chr1 (520-698)||(41196617-41196792)
chr1 (532-690)||(37712084-37712238)
chr1 (531-690)||(4068130-4068286)
chr1 (531-690)||(15515262-15515418)
chr1 (499-684)||(37329333-37329519)
chr1 (531-690)||(26988163-26988319)
chr1 (501-688)||(45267446-45267631)
chr1 (531-660)||(6337701-6337827)
chr1 (533-690)||(28690021-28690175)
chr1 (531-690)||(26946019-26946176)
chr1 (534-665)||(3069794-3069922)
chr1 (531-683)||(16888891-16889036)
chr1 (531-679)||(13038962-13039107)
chr1 (531-689)||(35590145-35590301)
chr1 (499-687)||(1005319-1005508)
chr1 (531-677)||(9572712-9572856)
chr1 (532-689)||(10365187-10365340)
chr1 (531-690)||(47413388-47413543)
chr1 (535-690)||(1565290-1565449)
chr1 (539-698)||(26435082-26435238)
chr1 (531-609)||(18327539-18327617)
chr1 (544-659)||(23544819-23544931)
chr1 (539-675)||(22593337-22593470)
chr1 (531-615)||(36422968-36423052)
chr1 (531-679)||(46473109-46473254)
chr1 (539-690)||(41130017-41130165)
chr1 (531-679)||(28122631-28122778)
chr1 (531-690)||(46500915-46501072)
chr1 (535-677)||(46689478-46689617)
chr1 (531-644)||(10082265-10082375)
chr1 (531-678)||(17628352-17628495)
chr1 (531-678)||(32497199-32497342)
chr1 (546-690)||(39658238-39658379)
chr1 (531-609)||(51162284-51162362)
chr1 (531-660)||(35282539-35282665)
chr1 (540-615)||(49971275-49971350)
chr1 (531-689)||(10849982-10850142)
chr1 (531-690)||(35897534-35897694)
chr1 (539-593)||(39941533-39941587)
chr1 (543-612)||(29333444-29333513)
chr1 (507-605)||(31378748-31378850)
chr1 (531-688)||(391183-391345)
chr1 (531-678)||(15791399-15791542)
chr1 (547-639)||(18317032-18317120)
chr1 (531-614)||(26542988-26543071)
chr1 (539-593)||(39941393-39941446)
chr1 (531-677)||(42591397-42591540)
chr1 (565-678)||(3115989-3116099)
chr1 (531-679)||(37156846-37156989)
chr1 (531-615)||(15631919-15632003)
chr1 (539-679)||(17814214-17814350)
chr1 (531-679)||(19220189-19220333)
chr1 (533-580)||(1265715-1265762)
chr1 (537-633)||(12256628-12256719)
chr1 (531-634)||(16225524-16225621)
chr1 (546-609)||(50919517-50919580)
chr1 (531-609)||(5243397-5243474)
chr1 (531-665)||(20169279-20169410)
chr1 (538-580)||(39941463-39941505)
chr1 (531-641)||(41003402-41003508)
chr1 (614-690)||(28870297-28870374)
chr1 (539-633)||(49738274-49738363)
chr1 (646-690)||(391140-391184)
chr1 (539-607)||(25485771-25485839)
chr1 (531-578)||(26936874-26936920)
chr1 (543-594)||(34265596-34265647)
chr1 (539-598)||(39941605-39941664)
chr1 (542-580)||(9177733-9177771)
chr1 (531-614)||(19284911-19284996)
chr1 (507-642)||(38781060-38781200)
chr1 (646-679)||(20169247-20169280)
chr1 (539-672)||(22103134-22103262)
chr1 (614-690)||(37431228-37431305)
[»] chr6 (55 HSPs)
chr6 (530-690)||(7267789-7267953)
chr6 (531-683)||(21025141-21025298)
chr6 (531-688)||(1240527-1240682)
chr6 (501-690)||(10755198-10755385)
chr6 (531-673)||(21891270-21891409)
chr6 (499-680)||(2034154-2034336)
chr6 (531-690)||(2027092-2027247)
chr6 (531-676)||(32675818-32675960)
chr6 (534-690)||(8014806-8014959)
chr6 (531-690)||(3210906-3211072)
chr6 (531-677)||(23239262-23239405)
chr6 (531-644)||(2255749-2255858)
chr6 (531-694)||(10687322-10687484)
chr6 (531-660)||(10874001-10874125)
chr6 (531-667)||(6758642-6758776)
chr6 (532-690)||(9202314-9202473)
chr6 (531-679)||(29623404-29623548)
chr6 (556-690)||(35071343-35071475)
chr6 (531-602)||(24625866-24625937)
chr6 (531-605)||(7446859-7446933)
chr6 (539-634)||(16589774-16589865)
chr6 (539-634)||(16605515-16605606)
chr6 (531-699)||(1172351-1172530)
chr6 (531-677)||(8010973-8011117)
chr6 (549-641)||(25430731-25430819)
chr6 (531-615)||(6776823-6776907)
chr6 (531-679)||(32165187-32165331)
chr6 (535-694)||(34509931-34510086)
chr6 (549-634)||(13429488-13429570)
chr6 (531-679)||(29052348-29052492)
chr6 (531-677)||(10184258-10184400)
chr6 (522-640)||(10619231-10619351)
chr6 (531-595)||(6632674-6632738)
chr6 (614-689)||(9201637-9201713)
chr6 (531-606)||(10054396-10054469)
chr6 (531-679)||(32615341-32615485)
chr6 (541-615)||(6958649-6958723)
chr6 (648-698)||(9201803-9201853)
chr6 (608-684)||(12816822-12816900)
chr6 (524-690)||(21871199-21871365)
chr6 (531-580)||(30533995-30534044)
chr6 (531-640)||(3829885-3829990)
chr6 (531-578)||(12817116-12817163)
chr6 (539-605)||(34413342-34413408)
chr6 (531-607)||(991277-991354)
chr6 (540-677)||(21609977-21610111)
chr6 (531-633)||(34801023-34801120)
chr6 (531-579)||(2040209-2040257)
chr6 (589-677)||(6752885-6752970)
chr6 (533-609)||(15054578-15054654)
chr6 (560-615)||(12816956-12817010)
chr6 (636-690)||(35111394-35111449)
chr6 (539-609)||(4272405-4272475)
chr6 (531-580)||(9894781-9894830)
chr6 (512-585)||(10730258-10730331)
[»] chr7 (61 HSPs)
chr7 (501-690)||(29378626-29378816)
chr7 (531-690)||(29390466-29390621)
chr7 (531-689)||(34922946-34923103)
chr7 (535-685)||(14691219-14691366)
chr7 (501-690)||(47511024-47511216)
chr7 (531-690)||(38372573-38372729)
chr7 (531-677)||(44613401-44613544)
chr7 (531-684)||(20888588-20888739)
chr7 (535-657)||(30181569-30181688)
chr7 (539-679)||(22032785-22032922)
chr7 (545-690)||(39279458-39279601)
chr7 (531-609)||(41094233-41094309)
chr7 (531-677)||(35809105-35809248)
chr7 (543-677)||(47654342-47654473)
chr7 (531-683)||(32917514-32917663)
chr7 (531-660)||(46743965-46744094)
chr7 (615-690)||(40629348-40629423)
chr7 (609-690)||(33204923-33205005)
chr7 (512-677)||(43818806-43818971)
chr7 (531-633)||(48021621-48021718)
chr7 (531-679)||(991515-991659)
chr7 (535-607)||(6406867-6406939)
chr7 (554-674)||(16012736-16012853)
chr7 (542-609)||(31613658-31613725)
chr7 (587-690)||(33287990-33288090)
chr7 (543-609)||(22319284-22319350)
chr7 (538-675)||(37465816-37465951)
chr7 (549-601)||(17944686-17944738)
chr7 (531-644)||(23356453-23356562)
chr7 (539-598)||(14536905-14536964)
chr7 (539-678)||(16932857-16932992)
chr7 (539-678)||(16938240-16938375)
chr7 (531-614)||(23119908-23119991)
chr7 (540-579)||(40629440-40629479)
chr7 (539-609)||(22575609-22575679)
chr7 (539-641)||(41677397-41677496)
chr7 (497-606)||(1054063-1054177)
chr7 (546-614)||(43391751-43391819)
chr7 (540-615)||(14593172-14593250)
chr7 (539-678)||(16958839-16958974)
chr7 (530-605)||(21027510-21027585)
chr7 (539-598)||(28759844-28759903)
chr7 (507-567)||(33288134-33288198)
chr7 (551-615)||(37779269-37779335)
chr7 (531-578)||(41037768-41037814)
chr7 (540-606)||(14675956-14676021)
chr7 (588-690)||(25908366-25908465)
chr7 (531-580)||(7098122-7098171)
chr7 (618-685)||(1401171-1401239)
chr7 (646-690)||(18837194-18837238)
chr7 (543-615)||(19308478-19308550)
chr7 (530-674)||(23137094-23137234)
chr7 (531-606)||(24414538-24414614)
chr7 (531-678)||(35246687-35246828)
chr7 (646-690)||(38372530-38372574)
chr7 (646-690)||(40629486-40629530)
chr7 (548-615)||(7774734-7774800)
chr7 (623-689)||(26331868-26331935)
chr7 (531-578)||(48895311-48895358)
chr7 (531-608)||(28004599-28004675)
chr7 (539-580)||(49104403-49104444)
[»] chr8 (61 HSPs)
chr8 (531-694)||(32975702-32975862)
chr8 (501-689)||(34286480-34286668)
chr8 (499-690)||(28879037-28879226)
chr8 (538-690)||(10298842-10298990)
chr8 (531-682)||(32131455-32131603)
chr8 (530-643)||(35168401-35168513)
chr8 (534-684)||(24350440-24350587)
chr8 (495-674)||(9131059-9131241)
chr8 (531-690)||(16972271-16972428)
chr8 (531-677)||(2669663-2669806)
chr8 (557-667)||(25465785-25465891)
chr8 (507-690)||(32212930-32213121)
chr8 (543-677)||(9782210-9782340)
chr8 (531-679)||(19925314-19925459)
chr8 (542-679)||(24866877-24867011)
chr8 (582-690)||(10213761-10213866)
chr8 (531-675)||(14942439-14942580)
chr8 (531-660)||(35285943-35286069)
chr8 (531-679)||(38895674-38895819)
chr8 (531-594)||(35453425-35453488)
chr8 (531-684)||(8752821-8752972)
chr8 (543-673)||(30974016-30974143)
chr8 (557-614)||(25333720-25333776)
chr8 (498-679)||(41145322-41145506)
chr8 (531-679)||(12607095-12607239)
chr8 (531-615)||(19925572-19925656)
chr8 (531-690)||(13131445-13131614)
chr8 (531-677)||(32924139-32924283)
chr8 (543-677)||(2563385-2563516)
chr8 (512-679)||(28280701-28280869)
chr8 (531-679)||(11988212-11988356)
chr8 (531-579)||(13265499-13265547)
chr8 (543-679)||(14262353-14262486)
chr8 (539-679)||(16706026-16706163)
chr8 (560-660)||(36907589-36907686)
chr8 (531-679)||(37410839-37410983)
chr8 (531-679)||(42102122-42102266)
chr8 (539-609)||(8216896-8216967)
chr8 (546-679)||(9788839-9788969)
chr8 (531-614)||(14709525-14709607)
chr8 (565-679)||(35055468-35055581)
chr8 (531-666)||(42363256-42363387)
chr8 (535-690)||(24087189-24087342)
chr8 (585-667)||(25333639-25333718)
chr8 (646-699)||(32131403-32131456)
chr8 (539-609)||(218247-218315)
chr8 (539-609)||(694807-694875)
chr8 (539-609)||(699016-699084)
chr8 (539-609)||(731870-731938)
chr8 (539-609)||(855766-855834)
chr8 (546-660)||(9130962-9131073)
chr8 (531-605)||(19327882-19327955)
chr8 (531-580)||(1089028-1089077)
chr8 (522-658)||(14724912-14725048)
chr8 (540-597)||(23412758-23412815)
chr8 (531-678)||(38338778-38338921)
chr8 (531-606)||(45548141-45548216)
chr8 (531-589)||(2289899-2289957)
chr8 (531-605)||(34102683-34102757)
chr8 (543-609)||(43577248-43577314)
chr8 (534-599)||(26046959-26047024)
[»] chr2 (60 HSPs)
chr2 (531-687)||(4026941-4027093)
chr2 (534-690)||(36501430-36501583)
chr2 (522-690)||(38216025-38216190)
chr2 (531-698)||(33321219-33321383)
chr2 (513-690)||(887405-887583)
chr2 (544-690)||(5903561-5903709)
chr2 (531-699)||(29774760-29774925)
chr2 (531-677)||(21788472-21788615)
chr2 (531-684)||(25836634-25836783)
chr2 (531-690)||(8832469-8832628)
chr2 (531-685)||(4004834-4004985)
chr2 (533-690)||(13056242-13056396)
chr2 (531-678)||(42839248-42839391)
chr2 (531-677)||(11776999-11777142)
chr2 (538-679)||(39592271-39592407)
chr2 (546-660)||(42064881-42064992)
chr2 (531-605)||(43787800-43787874)
chr2 (540-684)||(4533346-4533487)
chr2 (501-615)||(12223833-12223951)
chr2 (531-666)||(12683550-12683677)
chr2 (531-679)||(15155828-15155973)
chr2 (531-687)||(37409658-37409811)
chr2 (534-633)||(755714-755810)
chr2 (531-609)||(4090504-4090582)
chr2 (498-679)||(12238412-12238591)
chr2 (534-600)||(12442831-12442897)
chr2 (535-604)||(2790068-2790137)
chr2 (531-591)||(34913401-34913461)
chr2 (550-683)||(7480821-7480950)
chr2 (530-586)||(11072959-11073016)
chr2 (546-605)||(16108119-16108178)
chr2 (534-585)||(33321420-33321471)
chr2 (531-660)||(5516090-5516217)
chr2 (539-609)||(8342993-8343062)
chr2 (622-699)||(12442904-12442982)
chr2 (535-596)||(13097936-13097998)
chr2 (531-633)||(38471764-38471862)
chr2 (617-684)||(755632-755700)
chr2 (623-698)||(37420009-37420085)
chr2 (646-689)||(4090462-4090505)
chr2 (582-677)||(12950043-12950135)
chr2 (499-690)||(45163800-45163993)
chr2 (646-688)||(2790141-2790183)
chr2 (543-605)||(24439046-24439108)
chr2 (531-609)||(29133660-29133738)
chr2 (531-609)||(32366165-32366242)
chr2 (531-609)||(32522039-32522116)
chr2 (551-660)||(23956209-23956315)
chr2 (543-640)||(735991-736084)
chr2 (646-690)||(5903742-5903786)
chr2 (646-690)||(38215995-38216039)
chr2 (531-583)||(41554599-41554651)
chr2 (646-688)||(4026900-4026942)
chr2 (531-597)||(9140735-9140800)
chr2 (539-605)||(12267020-12267086)
chr2 (539-605)||(24007816-24007882)
chr2 (565-679)||(30382195-30382306)
chr2 (653-690)||(13097888-13097925)
chr2 (539-580)||(17546414-17546455)
chr2 (565-614)||(17546473-17546522)
[»] chr3 (60 HSPs)
chr3 (502-690)||(43079849-43080038)
chr3 (535-679)||(40240503-40240644)
chr3 (531-688)||(53217958-53218111)
chr3 (531-689)||(40580992-40581148)
chr3 (499-697)||(48597774-48597974)
chr3 (531-688)||(22809110-22809265)
chr3 (531-688)||(585035-585188)
chr3 (531-690)||(3845870-3846026)
chr3 (533-673)||(34707645-34707782)
chr3 (531-643)||(3870189-3870297)
chr3 (531-633)||(52421107-52421212)
chr3 (531-657)||(10521169-10521292)
chr3 (531-609)||(29270376-29270454)
chr3 (531-658)||(42956126-42956250)
chr3 (531-657)||(10667413-10667536)
chr3 (501-615)||(52021227-52021346)
chr3 (534-679)||(20174866-20175008)
chr3 (532-660)||(23816116-23816240)
chr3 (531-660)||(45331240-45331366)
chr3 (531-604)||(51409408-51409481)
chr3 (543-679)||(37243493-37243626)
chr3 (543-677)||(38524115-38524246)
chr3 (531-679)||(3876189-3876334)
chr3 (531-690)||(10272137-10272290)
chr3 (540-633)||(28741187-28741276)
chr3 (531-679)||(29614209-29614353)
chr3 (539-690)||(20685809-20685956)
chr3 (543-677)||(4974338-4974469)
chr3 (531-677)||(32901076-32901219)
chr3 (539-641)||(24842071-24842170)
chr3 (533-598)||(32900732-32900797)
chr3 (531-679)||(3645318-3645462)
chr3 (571-679)||(17752057-17752162)
chr3 (571-679)||(19053377-19053482)
chr3 (565-677)||(33946478-33946587)
chr3 (616-687)||(38631088-38631160)
chr3 (531-615)||(43971834-43971918)
chr3 (572-683)||(52895327-52895435)
chr3 (531-605)||(11528906-11528980)
chr3 (617-690)||(46573369-46573443)
chr3 (608-696)||(53261676-53261766)
chr3 (531-615)||(47403749-47403834)
chr3 (531-603)||(2086690-2086762)
chr3 (646-694)||(30321641-30321689)
chr3 (646-698)||(53261817-53261869)
chr3 (531-606)||(10448789-10448864)
chr3 (543-594)||(30473151-30473202)
chr3 (549-615)||(7300396-7300462)
chr3 (531-580)||(5129837-5129886)
chr3 (533-598)||(7292697-7292762)
chr3 (544-684)||(29002740-29002879)
chr3 (560-660)||(48816759-48816856)
chr3 (531-607)||(4257295-4257372)
chr3 (554-605)||(19307979-19308030)
chr3 (546-605)||(20365432-20365491)
chr3 (646-689)||(20685744-20685787)
chr3 (543-606)||(30383795-30383858)
chr3 (531-580)||(21296781-21296830)
chr3 (590-679)||(21720981-21721067)
chr3 (548-601)||(43069078-43069131)
[»] scaffold0157 (1 HSPs)
scaffold0157 (531-690)||(24760-24918)
[»] scaffold0024 (1 HSPs)
scaffold0024 (531-690)||(97121-97277)
[»] scaffold0057 (2 HSPs)
scaffold0057 (522-680)||(24314-24472)
scaffold0057 (531-609)||(43808-43887)
[»] scaffold0512 (1 HSPs)
scaffold0512 (531-677)||(4080-4222)
[»] scaffold0041 (1 HSPs)
scaffold0041 (531-609)||(108987-109063)
[»] scaffold0332 (2 HSPs)
scaffold0332 (531-676)||(14676-14817)
scaffold0332 (531-607)||(14848-14925)
[»] scaffold0299 (1 HSPs)
scaffold0299 (531-679)||(11227-11371)
[»] scaffold1367 (1 HSPs)
scaffold1367 (531-679)||(1073-1218)
[»] scaffold0048 (1 HSPs)
scaffold0048 (531-690)||(58783-58939)
[»] scaffold0004 (1 HSPs)
scaffold0004 (531-644)||(227721-227831)
[»] scaffold1088 (1 HSPs)
scaffold1088 (546-609)||(1324-1387)
[»] scaffold0027 (1 HSPs)
scaffold0027 (511-599)||(142331-142422)
[»] scaffold0012 (1 HSPs)
scaffold0012 (531-609)||(178515-178594)
[»] scaffold0015 (1 HSPs)
scaffold0015 (619-690)||(48543-48615)
[»] scaffold0022 (1 HSPs)
scaffold0022 (502-573)||(89282-89357)


Alignment Details
Target: chr5 (Bit Score: 348; Significance: 0; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 257 - 732
Target Start/End: Complemental strand, 31637440 - 31636965
Alignment:
Q  257 ttaggttacaacggttcttggtaannnnnnnaagttagtttagtgtaaaattaggttggttgagagttatggttagaaattttaactaggtttgaatttt 356  Q
    ||||||||||||| |||| |||||       |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||| || ||||    
T  31637440 ttaggttacaacgcttctcggtaattttttgaagttagtttagggtaatattaggttgcttgagagttatggttagaaattttaactgggttagagtttt 31637341  T
Q  357 ttgttgaattattagggtagttttggatttgggtaaggattagtgttactgattcttgtgtttctaatgctgaatgtttttaggttaatatgtt-gaaaa 455  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||| |||||    
T  31637340 ttgttgaattattagagtagttttggatttgtgttaggattagtgtttctgattctcgtgtttcttatgctgaatgtttttaggctaatatgttcgaaaa 31637241  T
Q  456 tttagtttaattgaactgggcctttctcagttggacaacgggtccgtttgtattgacttatttatgagcttatgcaaataagcttttatgtattattcat 555  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31637240 tttagtttaattgaactgggcatttctcagttggacaacgggtccgtttggattgacttatttatgagcttatgcaaataagcttttatgtattattcat 31637141  T
Q  556 aagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgttatttgcat 655  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  31637140 aagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattttcgttcgttcgtgagaacttatgaattaacgtaaaagcttgttatttgcat 31637041  T
Q  656 aagctgtttttcgtaagctcaaaaataagccaatctaaatgggtgtattatgtgtgagaaaaggggatcaagttact 732  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  31637040 aagctgtttttcgtaagctcaaaaatatgccaatccaaatgggtgtattatgtgtgagaaaa-gggatcaagttact 31636965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 726 - 991
Target Start/End: Complemental strand, 31636939 - 31636677
Alignment:
Q  726 agttactctgcttaataactctcattataaacattgaatcgtcaatccgattgttgattatattaacgatgaagcacacaaaggttttatataaattaga 825  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  31636939 agttactctgcttaataactctcattataaacattgaatcgtcaatccgattgttgattatattaatgatgaagcacacaaa-gttttatataaattaga 31636841  T
Q  826 aatttggtagctgtgtaaagtgtacttattt-atagtgggatattatt-acttaaattttggaaaagctatatggtg-gtatggtctaacttatttttat 922  Q
    ||||| ||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||| |||||||| |||  || ||||| ||||||||| ||||||    
T  31636840 aattt-gtagctgtgtacagtgtacttatttaatagt-ggatattattaacttaaatttttgaaaagct-tattatgtgtatgttctaactta-ttttat 31636745  T
Q  923 gaagtctacatgg-tttaaaaattttatgaaaattgttggcgatgatgtagcttaataaggacctttaat 991  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  31636744 gaagtctacatggttttaaaaattttatgaaaattg-tggcgatgatgtag-ttaataagaacctttaat 31636677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 31637699 - 31637544
Alignment:
Q  9 tgtaacactctcgggtctcgactatcgagctagggcttaaacgttcatcgttgtttccatcagaaccaaaccagagaggatgctttcaggggatatacct 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31637699 tgtaacactctcgagtctcgactatcgagctagggcttaaacgttcatcgttgtttccatcagaaccaaaccagagaggatgctttcaggggatatacct 31637600  T
Q  109 ccaaatcaaaccatttacattaagaatctcaatgaaaggatcaagaaagaaggtaa 164  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  31637599 ccaaatcaaaccatttacattaagaatctcaatgaaaagatcaagaaagacggtaa 31637544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 499 - 689
Target Start/End: Original strand, 28625459 - 28625649
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||||||||||| | |||||||||||||    ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  28625459 ccgtttggattgacttattttttagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaa 28625558  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||||||||||||||    ||||||||| ||||||||||| |||||||||  ||||||||||||| | |||||| |||||| ||||||||||||||    
T  28625559 gatacaattttcgtt----agtgagaacctatgaattaacataaaagcttatttatttgcataagttatttttcataagct-aaaaataagccaat 28625649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 500 - 686
Target Start/End: Complemental strand, 41059895 - 41059708
Alignment:
Q  500 cgtttgtattgacttatttatgagcttatgcaaa----taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaag 595  Q
    ||||||||||| |||| || | ||||||||||||    |||||||||||||||||||||||||||| ||||||| |||||||||| | || |||||||||    
T  41059895 cgtttgtattggcttactttttagcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaag 41059796  T
Q  596 atacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    || |||||||||||    ||||||||||||||||||||| |||||||||  |||||||||||| ||||||||| ||||||||||||||||||    
T  41059795 attcaattttcgtt----agtgagaacttatgaattaacataaaagcttatttatttgcataaactgtttttcataagctcaaaaataagcc 41059708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 1868861 - 1869012
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    ||||||||| ||| |||    
T  1868861 aaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgtt----agtgagaacgtatcaat 1868956  T
Q  631 taacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||    |||||||||||||||| |||||| ||||||| ||||||||||||||    
T  1868957 taacataaaa----gttatttgcataagctatttttcataagctcgaaaataagccaatc 1869012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 532 - 690
Target Start/End: Complemental strand, 40452548 - 40452392
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||   ||||| |||||||||||||||||     
T  40452548 aataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataattt---ttcgttagtgagaacttatgaata 40452452  T
Q  632 aacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||| ||| |||||  ||||||||||||||| |||||| ||||||||||||||||||||||    
T  40452451 aacataatagcttatttatttgcataagctatttttcataagctcaaaaataagccaatc 40452392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 531 - 697
Target Start/End: Original strand, 41534638 - 41534806
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg-----ttcgtgagtgagaactta 625  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||     ||||| ||||||||| ||    
T  41534638 aaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgttggtttcgttagtgagaacata 41534737  T
Q  626 tgaattaacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgg 697  Q
    ||||||||| ||||| |   |||||||| ||| || |||||| |||||||||||||||||||||| ||||||    
T  41534738 tgaattaacataaaaac---ttatttgcgtaaactatttttcataagctcaaaaataagccaatccaaatgg 41534806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 531 - 683
Target Start/End: Original strand, 42852037 - 42852185
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || ||||||||||||||    |||||||||||||||||    
T  42852037 aaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttat-aaaatacaattttcgtt----agtgagaacttatgaat 42852131  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataa 683  Q
    |||| |||||||||  ||| |||||||||||||||| | |||| | ||||||||    
T  42852132 taacataaaagcttatttagttgcataagctgttttgcataagttaaaaaataa 42852185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 500 - 690
Target Start/End: Original strand, 40696981 - 40697177
Alignment:
Q  500 cgtttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaa-----agaacaactta 590  Q
    |||||| |||||||||||| |||||||||||||||||    | |||||||||||||| ||||||||||||||||| ||||||||     | |||| ||||    
T  40696981 cgtttgaattgacttatttttgagcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagctta 40697080  T
Q  591 tgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    ||||||||||||||| ||||     ||| ||||||||||||||| |||||||||  ||||||| ||||||| |||||| |||||||||||||||||||||    
T  40697081 tgaagatacaatttttgttc----ctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaaaaataagccaat 40697176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 29922260 - 29922104
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| |||||| | ||||||||||  ||    ||||||| |||||||||    
T  29922260 aaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatacaatttttttt----agtgagagcttatgaat 29922165  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||  |||||||||  ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  29922164 taatataaaagcttatttatttgcataagctatttttcataaactcaaaaataagccaatc 29922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 12467279 - 12467439
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||| |||    ||||||||||||||||    
T  12467279 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgtt----agtgagaacttatgaa 12467374  T
Q  630 t---taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |   |||| |||||||||  ||||||||||||| | |||||| ||| || |||||||||||||||    
T  12467375 ttactaacataaaagcttatttatttgcataagttatttttcataacctaaaaaataagccaatc 12467439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 13060673 - 13060547
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||| |||||||||    |||||||||||||||||    
T  13060673 aaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgtt----agtgagaacttatgaat 13060578  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||||||||  |||||||||| ||||    
T  13060577 taacataaaagcttatttatttgcattagct 13060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 680
Target Start/End: Original strand, 24030230 - 24030375
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||  || |||||||||||||||    |||||||||||||||||    
T  24030230 aaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaac-acttgcgaggatacaattttcgtt----agtgagaacttatgaat 24030324  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaa 680  Q
    |||| |||||||||  ||||||||||||||| |||||  |||||| |||||    
T  24030325 taacataaaagcttatttatttgcataagctatttttaataagctaaaaaa 24030375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 17657257 - 17657383
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||| |||| ||||||||||||| |||||||||    |||||||||||||||||    
T  17657257 aaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgtt----agtgagaacttatgaat 17657352  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||||| ||  |||||||||||||||    
T  17657353 taacataaaaggttatttatttgcataagct 17657383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 539 - 690
Target Start/End: Complemental strand, 5559985 - 5559834
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaa---caacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacg 635  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||   || |||||||||||||||||||||||    |||||||| ||||||||| ||     
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgtt----agtgagaatttatgaatttaca 5559890  T
Q  636 taaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||    
T  5559889 taaaagcttatttatttgcataagctatttttcacgagctcaaaaataagccaatc 5559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 6144753 - 6144898
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||| || | |||||||| |||||||||| |||    || ||||||||||||||    
T  6144753 aaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgtt----agcgagaacttatgaat 6144848  T
Q  631 taacgtaaaagcttg-ttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||| |||||||||||| || |||||| |||||||||||    
T  6144849 taatataaaagcttgtttatttgcataaactatttttcataagctcaaaa 6144898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 533 - 690
Target Start/End: Original strand, 35536859 - 35537015
Alignment:
Q  533 ataagcttttatgtattattcat---aagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||||| ||||||||   |||||||||||| |||||||||||| |||| |||||||||||||||||||||||    | ||||||||||||||    
T  35536859 ataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgtt----actgagaacttatgaa 35536954  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     |||  |||||||||  ||||||||||||||| |||||| ||| |||||||||||| |||||    
T  35536955 -taatataaaagcttatttatttgcataagctatttttcataatctcaaaaataagtcaatc 35537015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 1576646 - 1576802
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||| || |||||||| ||||||||||||||| |||    |||||||||||| ||||    
T  1576646 aaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgtt----agtgagaacttaagaat 1576740  T
Q  631 taacgtaaaa-gcttgttatttgcataagct-gtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||   |  |||||||||||||||  |||||| ||||||||||||||||||||||    
T  1576741 taacataaaactgtatttatttgcataagctaatttttcataagctcaaaaataagccaatc 1576802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 1608169 - 1608013
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||| || |||||||| ||||||||||||||| |||    |||||||||||| ||||    
T  1608169 aaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgtt----agtgagaacttaagaat 1608075  T
Q  631 taacgtaaaa-gcttgttatttgcataagct-gtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||   |  |||||||||||||||  |||||| ||||||||||||||||||||||    
T  1608074 taacataaaactgtatttatttgcataagctaatttttcataagctcaaaaataagccaatc 1608013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 10537290 - 10537141
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||         |||||||||||||||    |||||||||||||||||    
T  10537290 aaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacag--------gatacaattttcgtt----agtgagaacttatgaat 10537203  T
Q  631 taacgt-aaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| | |||||||| | |||||||||||||| |||||| ||| ||||||||||||||||||    
T  10537202 taacataaaaagcttatatatttgcataagctatttttcataaactcaaaaataagccaatc 10537141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 550 - 685
Target Start/End: Complemental strand, 2577481 - 2577348
Alignment:
Q  550 attcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa-aagcttgtta 648  Q
    ||||||||||||||||||||| ||||||||| |||||||| | || |||||||||   ||||| ||||||||||||||||||||| ||| ||  |  |||    
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaacaacttgtaaaaatacaattt---ttcgttagtgagaacttatgaattaacataacaatttattta 2577385  T
Q  649 tttgcataagctgtttttcgtaagctcaaaaataagc 685  Q
    |||||||||||| |||||| |||||||||||||||||    
T  2577384 tttgcataagctatttttcataagctcaaaaataagc 2577348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 546 - 660
Target Start/End: Original strand, 41419531 - 41419642
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt- 644  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    ||||||||||||| ||||||| ||||| |||     
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtt----agtgagaacttatcaattaacataaaaactta 41419626  T
Q  645 gttatttgcataagct 660  Q
     |||||| ||||||||    
T  41419627 tttattttcataagct 41419642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 499 - 634
Target Start/End: Original strand, 42706775 - 42706919
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttat--gaaagaacaacttatg 592  Q
    ||||||| |||| ||||||| |||||||||||||||    ||||||||| ||||||||||||||||||||||||||||||||   ||| |||| ||||||    
T  42706775 ccgtttggattggcttatttttgagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatg 42706874  T
Q  593 aagatacaattttcgttcgtg---agtgagaacttatgaattaac 634  Q
    ||||||||||||||||  |||   ||||| |||||||||||||||    
T  42706875 aagatacaattttcgtcagtgaaaagtgaaaacttatgaattaac 42706919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 7364380 - 7364254
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||| || |||    |||||||||||||||||    
T  7364380 aaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaatatttgtt----agtgagaacttatgaat 7364285  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||  |||||||||  |||||||||||||||    
T  7364284 taatataaaagcttatttatttgcataagct 7364254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 686
Target Start/End: Complemental strand, 11912173 - 11912021
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||| ||||| || | ||||||||||||||||||| |||    |||||||||||||||||    
T  11912173 aaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgtt----agtgagaacttatgaat 11912078  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    |||| | |||||||  ||||||||  ||| | |||||| |||||||  |||||||||    
T  11912077 taacatgaaagcttatttatttgctcaagatatttttcataagctcgtaaataagcc 11912021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 1473371 - 1473445
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||    
T  1473371 aaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaatttt 1473445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 22202007 - 22201846
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaa----cttatgaagatacaattttcgttcgtgagtgagaacttat 626  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    ||| ||||||||||||||||||| | |||    || ||||    
T  22202007 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagcttgtgaagatacaattttcgttagcgag---aaagttat 22201911  T
Q  627 gaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||| |||| ||||| |||  ||||||| |||| || |||||| |||||| |||||||||| ||||    
T  22201910 gaaataacataaaaacttatttatttgtataaactatttttcataagctaaaaaataagcaaatc 22201846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 495 - 690
Target Start/End: Original strand, 1942985 - 1943166
Alignment:
Q  495 gggtccgtttgtattgacttatttatgagcttatgcaa----ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaactta 590  Q
    |||| |||||| |||| ||||||| |||||||||||||    ||||| ||||||||||||| |||||||||||||||||||||||||||               
T  1942985 gggtacgtttggattggcttatttttgagcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa----------- 1943073  T
Q  591 tgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
        |||||||||||| ||    ||||||||||||||||||| | ||||||||| || ||||||||||||  |||||||||||||||||||||||| |||    
T  1943074 ----gatacaattttcatt----agtgagaacttatgaattagcataaaagcttatttatttgcataagccatttttcgtaagctcaaaaataagcaaat 1943165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 531 - 632
Target Start/End: Complemental strand, 12987085 - 12986988
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||| ||| ||||| |||    |||||||||||||||||    
T  12987085 aaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgtt----agtgagaacttatgaat 12986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 698
Target Start/End: Complemental strand, 11706989 - 11706818
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||| |||| ||| |||||||| ||| ||||||||  |||||||||||||||||||||||   ||| |   |||||||||||||||    
T  11706989 aaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaattt---ttcttttttgagaacttatgaat 11706893  T
Q  631 taacgtaaaagctt-------gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
     ||| || ||||||        ||||||||||||||| |||||  |||||| ||||||||||||||| |||||||    
T  11706892 gaacatagaagcttaagcttatttatttgcataagctatttttgataagctaaaaaataagccaatcgaaatggg 11706818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 14243838 - 14243990
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||| |||||| |||||||||| |  | ||||||||||||| ||| |||| |||||||| ||||||||||   |||  ||||||||||||||||    
T  14243838 aaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaaacagcttatgaaaatacaatttt---tcgaaagtgagaacttatgaa 14243934  T
Q  630 ttaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    |||||  |||| ||| || ||||||| ||||| |||||| ||||||||||||||||    
T  14243935 ttaactgaaaaacttatttatttgcaaaagctatttttcataagctcaaaaataag 14243990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 2878747 - 2878591
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||||| ||||  ||| |||||||||||||| |||    ||||| ||||| | |||    
T  2878747 aaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaatttttgtt----agtgaaaacttttaaat 2878653  T
Q  631 taacgtaaaagctt-gttatttgcataagct-gtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||||||  |||||| ||||||||  |||||| |||||| |||||||||||||||    
T  2878652 taacataaaagcttatttatttacataagctattttttcataagctaaaaaataagccaatc 2878591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 40152947 - 40152802
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||| |||||| |||||  |||| ||| |||||||||||| ||||| ||||||||||| |||||||||||     |||||||||||||||    
T  40152947 aaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttc----ttgagaacttatgaat 40152852  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||| ||  ||||||||||||| |||||||| |||| ||||||    
T  40152851 taatataaaagattatttatttgcataagatgtttttcataagttcaaaa 40152802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 540 - 679
Target Start/End: Original strand, 29659084 - 29659220
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    ||||||||||||| |||||||||| || |||||||| |||| ||||  |||||||  |||||||||| ||    ||||||||||||||||||||  ||||    
T  29659084 tttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcatt----agtgagaacttatgaattaagataaa 29659179  T
Q  640 agctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    | |||  ||||||||||||||| |||||| |||||||||||    
T  29659180 aacttatttatttgcataagctctttttcataagctcaaaa 29659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 3977490 - 3977638
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||| ||||  ||||| |  ||  | ||| |||    ||||||||| |||||||    
T  3977490 aaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgtatcta--acttttgtt----agtgagaacgtatgaat 3977583  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    |||| ||||||||| || |||||||||||||||||||  |||||| |||||||||    
T  3977584 taacataaaagcttatttatttgcataagctgtttttaataagctgaaaaataag 3977638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 554 - 690
Target Start/End: Complemental strand, 39154809 - 39154676
Alignment:
Q  554 ataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttg 652  Q
    ||||||||||||||||||||||||||| |||   |||||||||| |||||||  ||    | |||||||||||||||||||  |||||||| || |||||    
T  39154809 ataagcttgtcaaggtagtttatgaaaaaactgattatgaagatgcaatttttatt----attgagaacttatgaattaacacaaaagcttatttatttg 39154714  T
Q  653 cataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||| ||||||  ||| |||| ||||||||||||    
T  39154713 cataagctatttttcagaagttcaataataagccaatc 39154676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 6125302 - 6125457
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||||||||||||| ||| | || ||| ||||||||| || | |||||||| ||||||| || |||    |||||||| ||||||||    
T  6125302 aaataaacttttatgtattattcataatcttataaatgtattttatgaaa-aatagcttatgaatatacaatatttgtt----agtgagaaattatgaat 6125396  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||  |||||||||  ||||||||||||||| |||||| |||| ||||||| ||| |||||    
T  6125397 taatataaaagcttatttatttgcataagctatttttcataagttcaaaaagaagtcaatc 6125457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 520 - 667
Target Start/End: Complemental strand, 13625607 - 13625458
Alignment:
Q  520 tgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatga-aagaacaacttatgaagatacaattttcgttcgtga 614  Q
    |||||||||||||||||    |||||||| ||||||||||||||||||  ||||||||||||| || |||| ||||| |||||| ||||||||||    |    
T  13625607 tgagcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgtt----a 13625512  T
Q  615 gtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttc 667  Q
    |||| ||||||| ||||||  |||||| ||  ||||||||||||||| ||||||    
T  13625511 gtgaaaacttataaattaatataaaagtttatttatttgcataagctatttttc 13625458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 524 - 633
Target Start/End: Complemental strand, 23087859 - 23087752
Alignment:
Q  524 cttatgcaaataa--gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaa 621  Q
    |||||||||||||  | |||||||||||||| |||||||||| ||  |||||||||||| ||||||| |||||| ||||||||| |||    ||||||||    
T  23087859 cttatgcaaataaatgtttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgtt----agtgagaa 23087764  T
Q  622 cttatgaattaa 633  Q
    ||||||||||||    
T  23087763 cttatgaattaa 23087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 540 - 679
Target Start/End: Complemental strand, 29418814 - 29418678
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    ||||||||||||| |||||| ||  || ||||||||||||| ||||| |||||||| |||||||||||||    |||||||| |||| ||||||  ||||    
T  29418814 tttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgtt----agtgagaatttataaattaagataaa 29418719  T
Q  640 agctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    | |||  |||||||||||| || |||||| |||||||||||    
T  29418718 aacttatttatttgcataaactttttttcataagctcaaaa 29418678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 38461353 - 38461206
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||| ||||||||||||| ||||| |||| || ||| ||||||||| ||||  ||||||||||| |||||| ||| ||||  |||||||||| |||    
T  38461353 aaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtga--gagaacttataaat 38461256  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  |||||| |||||||| |||||| |||||| ||||    
T  38461255 taaaataaaaacttatttatttacataagctatttttcataagcttaaaa 38461206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 539 - 660
Target Start/End: Original strand, 28357164 - 28357282
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||| ||||||||| | ||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    |  || ||||||| ||||||| |||    
T  28357164 ttttttgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtt----aacgaaaacttataaattaacataa 28357259  T
Q  639 aagctt-gttatttgcataagct 660  Q
    ||||||  |||||||||||||||    
T  28357260 aagcttatttatttgcataagct 28357282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 41125768 - 41125845
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||||| |||||| ||| ||||||||||||||||||    
T  41125768 agtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttcataaactcaaaaataagccaatc 41125845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 15122560 - 15122643
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| ||||  ||||||||||||||||||||| ||||||    
T  15122560 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgtccgtgag 15122643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 540 - 633
Target Start/End: Original strand, 43319027 - 43319116
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    ||||||||||||| |||||||||| || ||||||||||||| ||||  |||||||| || ||||||||||    ||||||||||||||||||||    
T  43319027 tttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgtt----agtgagaacttatgaattaa 43319116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 6150383 - 6150437
Alignment:
Q  522 agcttatgcaaataagcttttatgtattattcataagcttgtcaaggtagtttat 576  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||||||    
T  6150383 agcttatgcaaatgaggttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 543 - 665
Target Start/End: Original strand, 15414019 - 15414138
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| ||||| |||| |||||||||||  ||| ||||||||||||| |||||||||| |||    ||| ||| ||||||||||||| |||||||    
T  15414019 atgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaatatacaatttttgtt----agtaagatcttatgaattaacataaaagc 15414114  T
Q  643 tt-gttatttgcataagctgtttt 665  Q
    ||  ||||| ||||||||| ||||    
T  15414115 ttaattattcgcataagctctttt 15414138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 604
Target Start/End: Original strand, 18602618 - 18602691
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattt 604  Q
    |||||| |||||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||||| |||||||||    
T  18602618 aataagtttttatttattattcataagcttgttaaggtagcttatgaaaaaaacaacttatgaatatacaattt 18602691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 43268692 - 43268644
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43268692 aaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 548 - 690
Target Start/End: Original strand, 27805947 - 27806087
Alignment:
Q  548 ttattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gt 646  Q
    ||||| ||| ||||||||| ||||||||||||| ||||  |||| ||||||||||||| |||    ||||| ||||||| ||||||| |||||| ||  |    
T  27805947 ttatttatacgcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgtt----agtgaaaacttataaattaacataaaagtttatt 27806042  T
Q  647 tatttgcataagct-gtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||  |||||  |||||| |||| ||||||||||    
T  27806043 tatttgcataagctattttttaataagctaaaaagtaagccaatc 27806087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 342005 - 342075
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaa 601  Q
    ||||||| |||||||||||||| | ||| ||| ||||||||||||||||| | || |||||||||||||||    
T  342005 aaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaaatcagcttatgaagatacaa 342075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 532 - 690
Target Start/End: Complemental strand, 11163339 - 11163197
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||             |||||||||||||||||    |||| |||||||||||||    
T  11163339 aataagtttttatgtatgattcataagcttgtcgaggtagtttatgaa-------------aagatacaattttcgtt----agtgcgaacttatgaatt 11163257  T
Q  632 aacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||| |||||||||  ||||||| | ||| ||||  || | ||||||||||||||||||||    
T  11163256 aacataaaagcttatttatttgtaaaagttgttcatcattagctcaaaaataagccaatc 11163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 542 - 660
Target Start/End: Original strand, 28357378 - 28357493
Alignment:
Q  542 tatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaag 641  Q
    ||||||||||| ||||| |||| || ||||||||||||| ||||  |||||||| | |||||||||||    |||||||||||| |||||||  |||||     
T  28357378 tatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgtt----agtgagaacttacgaattaagataaaaa 28357473  T
Q  642 ctt-gttatttgcataagct 660  Q
    |||  |||||||||||||||    
T  28357474 cttatttatttgcataagct 28357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 679
Target Start/End: Complemental strand, 29658115 - 29657981
Alignment:
Q  541 ttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaa 640  Q
    |||||||||||||||||| |||| || ||||||||||||| || |  |||| ||||| |||||| |||     ||||||||||||| ||||||| |||||    
T  29658115 ttatgtattattcataagtttgtaaatgtagtttatgaaa-aagagtttataaagatgcaatttacgtc----agtgagaacttataaattaacataaaa 29658021  T
Q  641 gctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||||  || |||||||||| |||||| | |||||||||||    
T  29658020 gcttatttttttgcataagttgttttgcataagctcaaaa 29657981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 596
Target Start/End: Complemental strand, 3520573 - 3520509
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| || | |||| ||||||||||    
T  3520573 aaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaaacagcttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 17128293 - 17128342
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  17128293 aaataagcttttatgtattattcataaacttatcaaagtagtttatgaaa 17128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 35083333 - 35083410
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||||||||| |||||||||  |||||||||||| || ||| || ||| ||||||||||| ||||||    
T  35083333 agtgagaacttatgaattaacataaaagcttatttatttgcataaactatttatcataaactcaaaaataaaccaatc 35083410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 11991320 - 11991403
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||||||||| |||||||||| ||  | |||||||||| ||  | ||||||| |||||||||||||| |||||    
T  11991320 aaataagcttttatgtattatttataagcttgtaaatatggtttatgaaa-aaatagttatgaacatacaattttcgttagtgag 11991403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 546 - 697
Target Start/End: Complemental strand, 7364218 - 7364075
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt- 644  Q
    |||||||||||||||||||||      |||||||| |||| ||||||| ||||||||  ||| |    |||||||| |||||||||||| |||||||||     
T  7364218 tattattcataagcttgtcaaa-----ttatgaaaaaacagcttatgaggatacaatgctcgct----agtgagaagttatgaattaacataaaagctta 7364128  T
Q  645 gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgg 697  Q
     |||||| ||| |||  |||||| |||||||||||||||| ||| | ||||||    
T  7364127 attatttacatgagcaatttttcataagctcaaaaataagtcaacccaaatgg 7364075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 42558676 - 42558633
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  42558676 ttatttgcataagctatttttcataagctcaaaaataagccaat 42558633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 538 - 580
Target Start/End: Original strand, 2670097 - 2670139
Alignment:
Q  538 cttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  2670097 cttttatgtactattcataagtttgtcaaggtagtttatgaaa 2670139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 42808878 - 42808944
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||||| |||| ||  ||||| ||| || ||||| ||||||||||||||||||||||    
T  42808878 atgtattattcataagtttgtaaacatagttaatgcaaaaacaatttatgaagatacaattttcgtt 42808944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 576
Target Start/End: Complemental strand, 43266012 - 43265967
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat 576  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||    
T  43266012 aaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 7111054 - 7110984
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||| | |||| ||||||||||||| |||||||   ||||||||||| |||| |||||||||||||||||||    
T  7111054 aaataagttcttatttattattcataagattgtcaa---agtttatgaaa-aacagcttatgaagatacaatttt 7110984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 623 - 690
Target Start/End: Original strand, 13739332 - 13739400
Alignment:
Q  623 ttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||| | ||||||||| || ||||||||||| | |||||| ||| ||||||||||||||||||    
T  13739332 ttatgaattatcataaaagcttatttatttgcataagttatttttcataaactcaaaaataagccaatc 13739400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 17128294 - 17128250
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  17128294 ttatttgcataagctgttttgcataagctcaaaaataagtcaatc 17128250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 22573766 - 22573818
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    |||||||||||  || |||||| |||||||||||||||||||||| |||||||    
T  22573766 ttatttgcataccctatttttcataagctcaaaaataagccaatccaaatggg 22573818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 41125720 - 41125676
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||    
T  41125720 ttatttgcataagttgttttgcataagctcaaaaataagccaatc 41125676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 690
Target Start/End: Original strand, 6150858 - 6150962
Alignment:
Q  582 aacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaat 681  Q
    |||| |||||||| |||||||||| |||    | |||||||||| |||||||| |||||  | | |||||||||||| | |||||| ||||||||||||     
T  6150858 aacagcttatgaatatacaatttttgtt----actgagaacttacgaattaacataaaacttagctatttgcataagttatttttcataagctcaaaaag 6150953  T
Q  682 aagccaatc 690  Q
    |||| ||||    
T  6150954 aagcaaatc 6150962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 634
Target Start/End: Original strand, 7984123 - 7984219
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    |||| |||||||||||||||||||| ||||||| || ||||  |||| ||||  |||  |||||||||||||| |     ||||||||||||||||||||    
T  7984123 taagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcata----agtgagaacttatgaattaa 7984218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 17868190 - 17868119
Alignment:
Q  620 aacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||||| |||||| || || ||||||||||||| |||| | |||||| |||||||||||||||    
T  17868190 aacttatcaattaacataaaaggttatttatttgcataagctattttccataagctaaaaaataagccaatc 17868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 590
Target Start/End: Complemental strand, 32508206 - 32508151
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaactta 590  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||| || ||||||    
T  32508206 aagcttttatttatcattcataaacttgttaaggtagtttatgaaaaaataactta 32508151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 568 - 677
Target Start/End: Original strand, 9477388 - 9477494
Alignment:
Q  568 gtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgttttt 666  Q
    |||| |||||||| ||||  | |||||| |||||||||||||    | ||||||||||||||||||  ||||| ||| || |||||||||| || |||||    
T  9477388 gtaggttatgaaaaaacagttcatgaaggtacaattttcgtt----actgagaacttatgaattaagataaaaacttatttatttgcataaactcttttt 9477483  T
Q  667 cgtaagctcaa 677  Q
    | |||||||||    
T  9477484 cataagctcaa 9477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 586
Target Start/End: Complemental strand, 17868245 - 17868192
Alignment:
Q  534 taagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaagaacaa 586  Q
    ||||||||| |||||||||  |||||||||||||||||||||||| || |||||    
T  17868245 taagcttttgtgtattattttataagcttgtcaaggtagtttatggaaaaacaa 17868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 609
Target Start/End: Original strand, 19840058 - 19840119
Alignment:
Q  548 ttattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||| ||||||||||||| ||||||||||||| ||||  |||||   ||||||||||||||    
T  19840058 ttatttataagcttgtcaatgtagtttatgaaaaaacatgttatgtgaatacaattttcgtt 19840119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 2e-52; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 507 - 697
Target Start/End: Complemental strand, 48591523 - 48591332
Alignment:
Q  507 attgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaat 602  Q
    |||| ||||||| |||||||||||||||||    | |||||| ||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  48591523 attggcttatttctgagcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 48591424  T
Q  603 tttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgg 697  Q
    |||||||    | |||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  48591423 tttcgtt----aatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaatgg 48591332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 539 - 690
Target Start/End: Original strand, 17222852 - 17223000
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||    ||| ||||||||||||||||| |||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgtt----agttagaacttatgaattaacataa 17222947  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || |||  ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  17222948 aaacttatttatttgaataagctatttttcataagctcaaaaataagccaatc 17223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 531 - 698
Target Start/End: Original strand, 29877654 - 29877820
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| | || ||||||||||||||||||| |||    |||||||||||||||||    
T  29877654 aaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgtt----agtgagaacttatgaat 29877749  T
Q  631 taacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaa--taagccaatctaaatggg 698  Q
    |||| ||||||||| | |||||||||||||| |||||| |||| | |||||  |||||||||| |||||||    
T  29877750 taacataaaagcttatatatttgcataagctatttttcataagataaaaaaagtaagccaatccaaatggg 29877820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 502 - 690
Target Start/End: Original strand, 36740886 - 36741075
Alignment:
Q  502 tttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||| |||||||||||| |||||||||||||||    |||||||||| |||||| |||||||||||||| |||||||||||||  |||  | ||||||||    
T  36740886 tttggattgacttatttttgagcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagat 36740985  T
Q  598 acaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||| ||    ||||||||||||||||| |||  ||||||||  ||||||||||||||| |||||| |||||| |||||||||||||||    
T  36740986 acaattttcatt----agtgagaacttatgaatcaacacaaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatc 36741075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 499 - 690
Target Start/End: Original strand, 7148751 - 7148942
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||| ||||||| |||||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||    
T  7148751 ccgtttggattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaa 7148850  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     ||||||||||| ||    ||| ||||||||||||||| | |||||||||  |||||||||||||||  ||||| |||||||| ||||||| |||||    
T  7148851 aatacaattttcttt----agtcagaacttatgaattagcataaaagcttatttatttgcataagct-attttcataagctcagaaataagtcaatc 7148942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 531 - 683
Target Start/End: Original strand, 23297453 - 23297599
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||   |||| ||||||||||||||||||| |||    || ||||||||||||||    
T  23297453 aaataagcttttatgtattattcataagtttgtcaaggtagtttatga---aacagcttatgaagatacaatttttgtt----agcgagaacttatgaat 23297545  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataa 683  Q
    || | |||||||||  ||||||||||||||| |||||| |||||||||||||||    
T  23297546 tagcataaaagcttatttatttgcataagctatttttcataagctcaaaaataa 23297599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 28074380 - 28074535
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||    || || ||||| ||||     
T  28074380 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa-aaaagcttatgaagatacaattttcgtt----agcgaaaacttgtgaaa 28074474  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||| |||  ||||||||||||||| |||||| ||| || |||||||||||||||    
T  28074475 taacataaaatcttatttatttgcataagctatttttcataaactaaaaaataagccaatc 28074535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 531 - 699
Target Start/End: Complemental strand, 38345892 - 38345729
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||  ||    ||  |||||||||||||    
T  38345892 aaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttttatt----agccagaacttatgaat 38345798  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    |||| |||||||||  |||||| |||||||| |||||  |||||||||||||||||||||| ||| ||||    
T  38345797 taacataaaagcttatttatttacataagctattttt-ataagctcaaaaataagccaatccaaacgggt 38345729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 502 - 690
Target Start/End: Complemental strand, 488488 - 488299
Alignment:
Q  502 tttgtattgacttatttatgagcttatgcaaataag----cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||| |||||||||||| ||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||| ||   ||| | |||||    
T  488488 tttggattgacttatttttgagcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagat 488389  T
Q  598 acaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||  ||    ||||||||||||||||||||| |||||||||  |||||| |||||||| |||||  |||||| |||| |||| |||||    
T  488388 acaatttttatt----agtgagaacttatgaattaacataaaagcttatttatttccataagctattttttataagcttaaaagtaagtcaatc 488299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 12495717 - 12495559
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatga 628  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| || || |||||||||| ||| ||    ||||||||||||| |    
T  12495717 aaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcatt----agtgagaacttataa 12495622  T
Q  629 attaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||| ||||| |||  |||||||||||||||  ||||| |||||||||||||||| |||||    
T  12495621 attaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatc 12495559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 41228918 - 41229061
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||    ||| |||||||||||||    
T  41228918 aaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattttcatt----agttagaacttatgaat 41229013  T
Q  631 taacgtaaaagct-tgttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  ||||||||   ||||||||||||||| |||||| |||||||||    
T  41229014 taatataaaagctaatttatttgcataagctatttttcataagctcaa 41229061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 520 - 690
Target Start/End: Original strand, 23335642 - 23335813
Alignment:
Q  520 tgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||||    | ||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||| |     ||    
T  23335642 tgagcttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcata----ag 23335737  T
Q  616 tgagaacttatgaattaacgtaaaagcttg-ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||||||| ||||| |||| ||| |||||| |||| ||| || |||||| ||||||||| |||||    
T  23335738 tgagaacttatgaattaacataaaaacttgtttaattgcattagctatttctcataagctaaaaaataaggcaatc 23335813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 536 - 679
Target Start/End: Complemental strand, 18630961 - 18630821
Alignment:
Q  536 agcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacg 635  Q
    ||||||||| |||||| ||| ||||||| |||||||||||||||| |||| |||||||||||| | ||||||||    ||||||||||||||||||||      
T  18630961 agcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgtt----agtgagaacttatgaattaata 18630866  T
Q  636 taaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||||||||  ||||||||||||||| |||||| |||||||||||    
T  18630865 taaaagcttatttatttgcataagctatttttcataagctcaaaa 18630821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 42611939 - 42611783
Alignment:
Q  531 aaataagcttt-tatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||     ||||| ||||||||||    
T  42611939 aaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagttttcgt-----agtgacaacttatgaa 42611846  T
Q  630 ttaacgtaaaagctt-gttatttgcat-aagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||| |||||||||  |||||||||| || || |||||| |||||| ||||||| |||||||    
T  42611845 ttaacataaaagcttatttatttgcataaatctatttttcataagcttaaaaatacgccaatc 42611783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 697
Target Start/End: Original strand, 32628793 - 32628956
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||| ||| ||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||||| | ||   |||||||||||| ||||    
T  32628793 aaataagcttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaatttt-gatc---agtgagaacttacgaat 32628888  T
Q  631 taacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgg 697  Q
    |||| ||||||   || ||||| |||||||| |||||| |||| ||||||||||||||||| ||||||    
T  32628889 taacataaaagtaggtatatttacataagctatttttcataaggtcaaaaataagccaatccaaatgg 32628956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 531 - 686
Target Start/End: Original strand, 896985 - 897137
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| | |||||| |||||||||    ||||| ||||||| |||    
T  896985 aaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgtt----agtgaaaacttataaat 897080  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    |||  |||||||||  |||||||||||| || |||||| |||| | |||||||||||    
T  897081 taatataaaagcttatttatttgcataaactatttttcataagttaaaaaataagcc 897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 531 - 689
Target Start/End: Complemental strand, 18424348 - 18424194
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||| |||    | ||| |||||||||||    
T  18424348 aaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaa-aacaatttatgaagatacaatttttgtt----attgaaaacttatgaat 18424254  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||| |||||||||  |||||| ||| |||| |||||| |||| | | ||||||| ||||    
T  18424253 taacataaaagcttatttattttcatgagctatttttcataagtttataaataagtcaat 18424194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 549 - 690
Target Start/End: Original strand, 28663606 - 28663743
Alignment:
Q  549 tattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gtt 647  Q
    |||||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||      |||||||||||||| |||| |||||||||  ||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtt-----atgagaacttatgaactaacataaaagcttaatt 28663700  T
Q  648 atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    | |||||||| || |||||| |||||||||||||||| |||||    
T  28663701 agttgcataaactatttttcataagctcaaaaataagtcaatc 28663743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 544 - 690
Target Start/End: Complemental strand, 36255094 - 36254951
Alignment:
Q  544 tgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagct 643  Q
    |||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||  ||    ||||||||||||||||||||| ||||||||    
T  36255094 tgtattgttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaatt----agtgagaacttatgaattaacataaaagct 36254999  T
Q  644 t-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |  |||| |||||||||| |||||| |||||  ||||||||| |||||    
T  36254998 tatttatctgcataagctatttttcataagcaaaaaaataagtcaatc 36254951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 948087 - 948246
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||| |||| ||||| |||||||||||    || || || |||||||||||||    
T  948087 aaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaatt----tttgtcagagagaacttatgaa 948182  T
Q  630 tta--acgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||  || ||||||||| || |||||||||||||  | ||| |||||||||||||||| |||||    
T  948183 ttaacacataaaagcttattcatttgcataagctactcttcataagctcaaaaataagtcaatc 948246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 532 - 674
Target Start/End: Complemental strand, 46704340 - 46704201
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||| |||| |||||||||||| ||||||| ||    ||||||||||||||||||    
T  46704340 aataagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattttcatt----agtgagaacttatgaatt 46704245  T
Q  632 aacgt-aaaagcttgttatttgcataagctgtttttcgtaagct 674  Q
    ||  | ||||| |  ||||||||||||| | |||||| ||||||    
T  46704244 aatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 501 - 608
Target Start/End: Complemental strand, 52274225 - 52274114
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaataag----cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||||||| |||||||||||||||||     ||||||||||||||| |||||||| ||||||||||||| |||| |||| ||||||||||    
T  52274225 gtttgaattggcttatttttgagcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaaga 52274126  T
Q  597 tacaattttcgt 608  Q
    ||||||||||||    
T  52274125 tacaattttcgt 52274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 544 - 677
Target Start/End: Complemental strand, 2702773 - 2702643
Alignment:
Q  544 tgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagct 643  Q
    ||||||||| ||||| |||| ||||||||| ||||||  |||||||||||| ||||||||||| ||    ||| ||| ||||||||||||| ||||||||    
T  2702773 tgtattatttataagtttgttaaggtagttaatgaaaagacaacttatgaatatacaattttcatt----agtaagatcttatgaattaacataaaagct 2702678  T
Q  644 t-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |  ||||||||||| ||| ||||||||||||||||    
T  2702677 taattatttgcatatgctctttttcgtaagctcaa 2702643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 533 - 601
Target Start/End: Original strand, 35124404 - 35124472
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaa 601  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35124404 ataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaa 35124472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 540 - 687
Target Start/End: Original strand, 35405708 - 35405851
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    |||||||||||| | ||| |||||||||  ||||||||||| |||| |||||||||||| |||||||||| || ||     || ||| ||||||| ||||    
T  35405708 tttatgtattatacttaatcttgtcaagacagtttatgaaaaaacagcttatgaagatagaattttcgttagtaag-----acctattaattaacataaa 35405802  T
Q  640 agctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcca 687  Q
    |||||  ||||||||||||||| |||||| |||||| ||||||||||||    
T  35405803 agcttatttatttgcataagctatttttcataagctaaaaaataagcca 35405851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 30956697 - 30956855
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||| |||||||| ||| |||||| |||||||||||||||||| |||   ||| |||||| || |||| ||| ||   ||| ||||||||||    
T  30956697 aaataagctttttatgtattactcacaagcttctcaaggtagtttatgaaaaaacggtttacgaagatccagtttttgttagt---tgaaaacttatgaa 30956793  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||| |||  ||||||||||||||| |||||| |||||| ||||||||| |||||    
T  30956794 ttaatgtaaaaacttatttatttgcataagctatttttcataagctaaaaaataagtcaatc 30956855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 566 - 680
Target Start/End: Original strand, 22273830 - 22273941
Alignment:
Q  566 aggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgttt 664  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||    |||||||| |||||||||||| |||||| ||  |||||||||||| || |||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgtt----agtgagaagttatgaattaacataaaagtttatttatttgcataatctattt 22273925  T
Q  665 ttcgtaagctcaaaaa 680  Q
    |||||||||| |||||    
T  22273926 ttcgtaagctaaaaaa 22273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 543 - 677
Target Start/End: Complemental strand, 22397364 - 22397233
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| |||||  ||| |||||||||||||||| ||||||||||||| ||||||||||||||    ||| ||| ||||||||||||| |||||||    
T  22397364 atgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgtt----agtaagatcttatgaattaacttaaaagc 22397269  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||  |||||||| ||| || |||||| |||| ||||    
T  22397268 ttaattatttgcgtaaactctttttcataagttcaa 22397233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 43699554 - 43699477
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaaca--acttatgaagatacaattttc 606  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||   ||||||||||||||||||||    
T  43699554 aaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaacagctcttatgaagatacaattttc 43699477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 615
Target Start/End: Complemental strand, 8057159 - 8057075
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||| |||| ||| | ||||||||||||||| || |||||||||    
T  8057159 aaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagatacaatatttgttcgtgag 8057075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 213011 - 212952
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  213011 ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 532 - 615
Target Start/End: Complemental strand, 7206656 - 7206573
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||||||||| |||||||||  ||| ||| |||||||||||||||| ||||||||||||||||| | |||||||| |||||    
T  7206656 aataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgag 7206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 608 - 690
Target Start/End: Complemental strand, 42153160 - 42153077
Alignment:
Q  608 ttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||| ||||| |||| |||||||||| ||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  42153160 ttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagctattttacgtaagctcaaaaataagccaatc 42153077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 501 - 660
Target Start/End: Original strand, 825663 - 825823
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||| ||| |||||||||||||||    |||||||| | |||||||||||||| |||| || |||||||||||| |||| || |||||||    
T  825663 gtttggattggcttctttttgagcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaaga 825762  T
Q  597 tacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||| |||    ||||| | ||||||||||||| ||||| |||  |||||||||||||||    
T  825763 tacattttttgtt----agtgaaagcttatgaattaacataaaatcttatttatttgcataagct 825823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 531 - 604
Target Start/End: Complemental strand, 39932825 - 39932752
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattt 604  Q
    |||||| ||||||||||||||| ||||| |||| |||||||| ||||||| ||||| |||||||||||||||||    
T  39932825 aaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 539 - 606
Target Start/End: Complemental strand, 21216391 - 21216324
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    |||||||||||||||||||||||||||||||||||||||||| |  |  |||||||| ||||||||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattttc 21216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 602
Target Start/End: Original strand, 45018548 - 45018619
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaat 602  Q
    ||||||| |||||| |||||||||| || |||| || ||||||||||||| |||||||||||||||||||||    
T  45018548 aaataagattttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaat 45018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 539 - 608
Target Start/End: Complemental strand, 1374426 - 1374356
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaa-caacttatgaagatacaattttcgt 608  Q
    ||||||| || |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||    
T  1374426 ttttatgcatgattcataagcttgtcatggtagtttatgaaaaaaccagcttatgaagatacaattttcgt 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 27368223 - 27368145
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||||||| ||||  |||| ||||||||||| |||||    
T  27368223 aaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaattatcgtt 27368145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 553 - 660
Target Start/End: Original strand, 40699393 - 40699501
Alignment:
Q  553 cataagcttgtcaaggtagtttatgaaagaacaa----cttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gtt 647  Q
    |||||||||||||||||||||||||||| |||||    |||||||||||||| ||    ||||| ||||||||||||||||||||| ||||| |||  ||    
T  40699393 cataagcttgtcaaggtagtttatgaaaaaacaaacatcttatgaagatacagtt----ttcgtaagtgagaacttatgaattaacataaaatcttattt 40699488  T
Q  648 atttgcataagct 660  Q
     ||||||||||||    
T  40699489 gtttgcataagct 40699501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 43983453 - 43983375
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||| || |||||||||| |||||||||| ||| |||||||| ||| |||||||||| || ||||||||||||||    
T  43983453 aaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgtt 43983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 48667768 - 48667841
Alignment:
Q  618 agaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| |||||| | |||| |||||||||||||||    
T  48667768 agaacttatgaattaacataaaagcttatttatttgcataagctatttttcatgagcttaaaaataagccaatc 48667841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 533 - 605
Target Start/End: Original strand, 2405205 - 2405276
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||| || | |||||| ||||||||||||    
T  2405205 ataagctattatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaatttt 2405276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 2548118 - 2547973
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||| | |||||||| ||| | | ||| |||||||||||| ||||| ||||||||||| |||||||| |    | ||||||||||| |||    
T  2548118 aaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgct----aatgagaacttataaat 2548023  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  ||||||||||||||| ||| || |||||||||||    
T  2548022 taatataaaaacttatttatttgcataagctctttctcataagctcaaaa 2547973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 615
Target Start/End: Complemental strand, 4603402 - 4603319
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  4603402 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgag 4603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 47202841 - 47202985
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||| | ||||  || | |||||||||||||||| ||| | ||||||||||||||||||||||    ||||||| ||||| |||    
T  47202841 aaataagtttttatgtattacttataaattttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgtt----agtgagatcttataaat 47202935  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  ||||||  ||||| | |||||| |||||||||||    
T  47202936 taaaataaaagcttacttatttatataagttatttttcataagctcaaaa 47202985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 535 - 640
Target Start/End: Complemental strand, 55638148 - 55638047
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||| ||||  |||| |||||||||| | ||||    ||||||||||||| |||||||    
T  55638148 aagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgtt----agtgagaacttataaattaac 55638053  T
Q  635 gtaaaa 640  Q
     |||||    
T  55638052 ataaaa 55638047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 520 - 660
Target Start/End: Original strand, 8601201 - 8601342
Alignment:
Q  520 tgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||||    |||||| | ||||||| |||||| |||||| ||||||||||||| |||   |||||||||||||||||| |||    ||    
T  8601201 tgagcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgtt----ag 8601296  T
Q  616 tgagaacttatgaattaacgtaaaagctt-gttatttgcataagct 660  Q
    ||| || |||| ||||||| | |||||||  |||||||||||||||    
T  8601297 tgaaaaattataaattaacattaaagcttatttatttgcataagct 8601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 640
Target Start/End: Complemental strand, 43415360 - 43415254
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||||||||| |||| || |||||||| |||| ||||| |||| |||||| ||| || ||| ||||   | |||||||||||    
T  43415360 aaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatataatatttgttagtga---aaaacttatgaat 43415264  T
Q  631 taacgtaaaa 640  Q
    |||| |||||    
T  43415263 taacataaaa 43415254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 569 - 667
Target Start/End: Complemental strand, 11256693 - 11256599
Alignment:
Q  569 tagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttc 667  Q
    |||||||||||| |||| ||||||||||||||||||| |||    || |||||||||||||||||| |||||||||  |||||||||||| || ||||||    
T  11256693 tagtttatgaaa-aacagcttatgaagatacaattttagtt----agcgagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 11256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 545 - 640
Target Start/End: Original strand, 33533957 - 33534048
Alignment:
Q  545 gtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaa 640  Q
    |||||||||||||| | ||||||||||||||||||| |||| |  | ||| ||||||||||||||    |||||||||||||||| |||| |||||    
T  33533957 gtattattcataagttagtcaaggtagtttatgaaaaaacagcccacgaatatacaattttcgtt----agtgagaacttatgaactaacataaaa 33534048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 533 - 606
Target Start/End: Complemental strand, 2494469 - 2494396
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    |||||||||||  ||||||| |||||||||| |||||||||||||||| || |  |||||||||||| ||||||    
T  2494469 ataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaagataccattttc 2494396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 3564235 - 3564284
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  3564235 aaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 4331352 - 4331401
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  4331352 aaataagcttttatttattattcataactttgtcaaggtagtttatgaaa 4331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 633
Target Start/End: Original strand, 15184562 - 15184659
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | ||| |||||||||||| ||||  ||||||||||||||||||||||    ||||||||||||| |||    
T  15184562 aaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgtt----agtgagaacttataaat 15184656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 537 - 689
Target Start/End: Complemental strand, 29997375 - 29997228
Alignment:
Q  537 gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgt 636  Q
    |||||||| |||||||||||||||| |||||||||||||||||| || | ||||  ||||||||||     ||||| | | ||||||||| ||||||| |    
T  29997375 gcttttatatattattcataagcttatcaaggtagtttatgaaaaaaaatctta-caagatacaat-----ttcgtcaataagaacttattaattaactt 29997282  T
Q  637 aaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||| |||  |||||  |||||||| |||||| |||| | |||||||| |||||    
T  29997281 aaaaacttatttattaacataagctatttttcataagttaaaaaataatccaat 29997228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 573 - 678
Target Start/End: Original strand, 31022457 - 31022559
Alignment:
Q  573 ttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaa 671  Q
    |||||||| |||| ||||| ||||||||||||||||     ||||| |||||||||||||| ||||| ||||  ||||||||||||| |||||||| |||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtc----agtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataa 31022552  T
Q  672 gctcaaa 678  Q
     ||||||    
T  31022553 tctcaaa 31022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 588 - 689
Target Start/End: Complemental strand, 34526351 - 34526253
Alignment:
Q  588 ttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    |||||||||||||||||||  |    ||||||||||||||||||||| |||||||||  |||||||||||| || |||||| ||||||| ||| |||| |    
T  34526351 ttatgaagatacaattttccat----agtgagaacttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcgaaagtaagtc 34526256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 52700615 - 52700469
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttat-gaa 629  Q
    |||||||  ||||||||||||| |||||||||| || || |||||||||| || |  |||||||||||| |||||||||    ||| |||||||||  ||    
T  52700615 aaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatacgattttcgtt----agtaagaacttataaaa 52700520  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||||| |||||| ||  |||||| |||||| | |||||| |||||||||||    
T  52700519 ttaacataaaagattatttatttacataagttctttttcataagctcaaaa 52700469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 684
Target Start/End: Complemental strand, 2330515 - 2330394
Alignment:
Q  560 ttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataag 658  Q
    ||||||| |||||||||| || | |||| |||||||||||||||||| ||     ||||||||||||||| |||  |||||| ||  |||| |||||| |    
T  2330515 ttgtcaatgtagtttatgtaaaagcaacgtatgaagatacaattttcatt----tgtgagaacttatgaaataaaataaaagtttatttatctgcatagg 2330420  T
Q  659 ctgtttttcgtaagctcaaaaataag 684  Q
     |||||||| ||||||||||||||||    
T  2330419 ttgtttttcataagctcaaaaataag 2330394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 677
Target Start/End: Complemental strand, 26206416 - 26206283
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    ||||||||||||| ||||| |||| || ||||||||||||| ||||  |||||||  ||| |||||||||    ||| ||||||||| ||||||  ||||    
T  26206416 tttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgtt----agtaagaacttataaattaaaataaa 26206321  T
Q  640 agcttgttatttgcataagctgtttttcgtaagctcaa 677  Q
    |  |  ||||||| ||||||| |||||| |||||||||    
T  26206320 atttatttatttggataagctctttttcataagctcaa 26206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 28663403 - 28663464
Alignment:
Q  495 gggtccgtttgtattgacttatttatgagcttatgcaaata----agcttttatgtattatt 552  Q
    ||||||||||| |||||||||||| ||||||||||||||||    |||||||||||||||||    
T  28663403 gggtccgtttggattgacttatttttgagcttatgcaaataaatgagcttttatgtattatt 28663464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 615
Target Start/End: Complemental strand, 39931602 - 39931531
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||| | |||||| | |||||||||||||||| ||| | |||||||||||||||||||||| |||||    
T  39931602 atgtattatttacaagctttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgag 39931531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 3564306 - 3564377
Alignment:
Q  620 aacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||||| |||||| || || ||||||||||||| |||||| |||||||||||||||| |||||    
T  3564306 aacttataaattaacataaaagattatttatttgcataagctatttttcataagctcaaaaataagtcaatc 3564377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 539 - 614
Target Start/End: Original strand, 18258033 - 18258107
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    ||||||||||||||||||| ||| ||||| |  ||| ||||| |||||||||||||| ||||||||||||| ||||    
T  18258033 ttttatgtattattcataaacttatcaagatgttttttgaaa-aacaacttatgaagttacaattttcgttagtga 18258107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 582
Target Start/End: Original strand, 29615389 - 29615440
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaga 582  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||||    
T  29615389 aaataagcttatatgtattattcataagcttgtagtggtagtttatgaaaga 29615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 647 - 698
Target Start/End: Complemental strand, 35124402 - 35124351
Alignment:
Q  647 tatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    ||||||||||||||||||| | |||||||||||||||| ||||| |||||||    
T  35124402 tatttgcataagctgttttgcataagctcaaaaataagtcaatccaaatggg 35124351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 495 - 606
Target Start/End: Original strand, 2141616 - 2141731
Alignment:
Q  495 gggtccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaactta 590  Q
    ||||||||||| |||  |||||||  ||||||||||||||    |||||||||||| ||||| ||||  |||| ||||||  |||| ||| ||||  |||    
T  2141616 gggtccgtttgaattagcttattttagagcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagttta 2141715  T
Q  591 tgaagatacaattttc 606  Q
    ||||||||||||||||    
T  2141716 tgaagatacaattttc 2141731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 35010226 - 35010304
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||||||| | || |  |||| ||||||||| |||||||    
T  35010226 aaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgtt 35010304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 665
Target Start/End: Original strand, 46650286 - 46650420
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttat--ga 628  Q
    ||||||||||| |||||||||||||||  |||| |  ||||||||||||| || |  |||| |||| |||||||||||| ||||  ||||||||||   |    
T  46650286 aaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtga--gagaacttataaaa 46650383  T
Q  629 attaacgtaaaagcttgttatttgcataagctgtttt 665  Q
    |||||| ||||| ||| ||  || |||||||||||||    
T  46650384 attaacataaaaacttatttatttcataagctgtttt 46650420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 690
Target Start/End: Original strand, 48687006 - 48687104
Alignment:
Q  588 ttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    |||| |||||||||||||| ||    ||||||||||||||||||||| || ||| ||  |||||||||||||||  ||||| |||||||||||||||| |    
T  48687006 ttataaagatacaattttcatt----agtgagaacttatgaattaacatataagtttatttatttgcataagct-attttcataagctcaaaaataaggc 48687100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 699
Target Start/End: Original strand, 1374433 - 1374486
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    ||||||||||||| | |||| | |||||||||||||||||||||| ||||||||    
T  1374433 ttatttgcataagtttttttgcataagctcaaaaataagccaatccaaatgggt 1374486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 576
Target Start/End: Original strand, 48686964 - 48687009
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat 576  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||||    
T  48686964 aaataagtttttatgtactattcataagcttgtcaacgtagtttat 48687009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 8130503 - 8130551
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    ||||||||||||||| |||||||||||| |||||| ||||| |||||||    
T  8130503 aaataagcttttatgcattattcataagtttgtcagggtagcttatgaa 8130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 539 - 615
Target Start/End: Original strand, 19725316 - 19725392
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||| ||||| |||| |||||| ||||||||| ||||   |||||||||| ||||||| || |||||    
T  19725316 ttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaagatataattttcattagtgag 19725392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 539 - 679
Target Start/End: Original strand, 22117377 - 22117513
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||    ||||||| || |||||||||||    ||| |||||||||  |||||  |||    
T  22117377 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatgcaattttcgtt----agtcagaacttatagattaaaataa 22117471  T
Q  639 aagcttgt-tatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||||| | ||||| |||||||| |||||| |||||||||||    
T  22117472 aagcttatctatttacataagctatttttcataagctcaaaa 22117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 23297454 - 23297410
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||    
T  23297454 ttatttgcataagctattttgcataagctcaaaaataagccaatc 23297410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 40699372 - 40699328
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||    
T  40699372 ttatttgcataagctgttttgcataagctcaataataagccaatc 40699328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Original strand, 43699553 - 43699597
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||    
T  43699553 ttatttgtataagttgtttttcataagctcaaaaataagccaatc 43699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 46176049 - 46175974
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg 607  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| || |  ||||||||||||||||||||    
T  46176049 aaataagtttttatgtattatttataaattttt-aaggtagtttatgaaaaaatagtttatgaagatacaattttcg 46175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 678
Target Start/End: Complemental strand, 42617292 - 42617157
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||| |||||||| ||||| || | |||||||||||||||| || |  |||||||||||  |||||||||    ||||| ||||||| ||||||  |||    
T  42617292 ttttaagtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatatgattttcgtt----agtgaaaacttataaattaaaataa 42617198  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    || |||  |||||| |||||||| |||||| ||||||||||    
T  42617197 aaacttatttatttacataagctatttttcataagctcaaa 42617157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 10046255 - 10046325
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||| ||||||||  |||| |||||||| ||||||||| ||| ||||  ||||||| ||||||||||||||    
T  10046255 ttttttgtattatctataaacttgtcaatgtagtttataaaaaaacaggttatgaaaatacaattttcgtt 10046325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 10794980 - 10794907
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||| |||||||||||||| | ||||| || ||||| |||||||||| || |  ||||||||||||||||||    
T  10794980 aaataagtttttatgtattatttaaaagctcgttaaggtggtttatgaaa-aatagtttatgaagatacaatttt 10794907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 43740146 - 43740073
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||| |||||  |||||||||||| |||||| | ||| ||||||||| ||||  ||||||||||||||||||    
T  43740146 aaataagtttttacatattattcataaacttgtctaagtaatttatgaaa-aacagtttatgaagatacaatttt 43740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 579
Target Start/End: Original strand, 11298611 - 11298656
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    ||||||||||| |||||||||| ||||| | |||||||||||||||    
T  11298611 taagcttttatttattattcatgagcttcttaaggtagtttatgaa 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 568 - 660
Target Start/End: Original strand, 34633445 - 34633531
Alignment:
Q  568 gtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagct 660  Q
    |||||||||||||  |||||||||||| ||||||||||| |     ||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  34633445 gtagtttatgaaa--acaacttatgaa-atacaattttcata----agtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 34633531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 41071444 - 41071521
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||| | ||||||| ||||||||| || |||| | |||||| |||||| |||||| ||| |||||||||||    
T  41071444 agtgagaacttgtaaattaacataaaagcttatttattttcttaagctatttttcataagctaaaatataagccaatc 41071521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 48238188 - 48238135
Alignment:
Q  550 attcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatt 603  Q
    ||||||||| || |||| ||| ||||||||| ||||||||||||| ||||||||    
T  48238188 attcataagtttatcaaagtattttatgaaaaaacaacttatgaaaatacaatt 48238135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 576 - 689
Target Start/End: Original strand, 48721880 - 48721990
Alignment:
Q  576 tgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagct 674  Q
    ||||| || |||||||||||||| |||||| |||    ||||||||||||||||||||  |||||||||  ||||||| ||||  | |||||  ||||||    
T  48721880 tgaaaaaataacttatgaagatataatttttgtt----agtgagaacttatgaattaatataaaagcttatttatttgtataaattattttttataagct 48721975  T
Q  675 caaaaataagccaat 689  Q
     ||||||||| ||||    
T  48721976 aaaaaataagtcaat 48721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 6e-49; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 502 - 690
Target Start/End: Original strand, 48819281 - 48819470
Alignment:
Q  502 tttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||| |||| ||||||| |||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  48819281 tttggattggcttatttttgagcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagat 48819380  T
Q  598 acaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||| |||| |||    ||||||||||||||||||||| |||||||||  ||||||||||||||| |||||| |||||| |||||||||||||||    
T  48819381 acattttttgtt----agtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatc 48819470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 520 - 698
Target Start/End: Complemental strand, 41196792 - 41196617
Alignment:
Q  520 tgagcttatgcaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgag 619  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| |||    ||||||    
T  41196792 tgagcttatgcaaataagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgtt----agtgag 41196697  T
Q  620 aacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    | ||| ||||||||| |||| ||||  ||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  41196696 agcttgtgaattaacataaaggcttatttatttgcataagctattttacataagctcaaaaataagccaatccaaatggg 41196617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 532 - 690
Target Start/End: Original strand, 37712084 - 37712238
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    ||| ||||||||||||||    
T  37712084 aataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgtt----agtaagaacttatgaatt 37712178  T
Q  632 aacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||| |||||| ||  ||||||||||||||| ||||||||||||||||||||||| |||||    
T  37712179 aacataaaagtttatttatttgcataagctatttttcgtaagctcaaaaataagtcaatc 37712238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 4068130 - 4068286
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    |||||||||||||||||    
T  4068130 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgtt----agtgagaacttatgaat 4068225  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||  |||||| ||  |||||||||||||||  ||||| ||| || |||||||||||||||    
T  4068226 taatataaaagtttatttatttgcataagctacttttcataaactaaaaaataagccaatc 4068286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 15515418 - 15515262
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||    |||||||||||||||||    
T  15515418 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgtt----agtgagaacttatgaat 15515323  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| | |||||||  |||||| | |||||| |||||| |||||||| |||||||||||||    
T  15515322 taacatgaaagcttatttatttacttaagctatttttcataagctcataaataagccaatc 15515262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 684
Target Start/End: Complemental strand, 37329519 - 37329333
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| || | ||||||| |||| ||||||||||||    ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  37329519 ccgtttggataggcttatttttgagattatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaa 37329420  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    |||||||||||||||     |||||||||||| ||||||| |||||||||  ||||||||||||| | |||||| ||||||||||||||||    
T  37329419 gatacaattttcgtt----ggtgagaacttataaattaacataaaagcttatttatttgcataagttatttttcataagctcaaaaataag 37329333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 26988163 - 26988319
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||    ||| | |||||||||||    
T  26988163 aaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgtt----agtaaaaacttatgaat 26988258  T
Q  631 taacgtaaaagct-tgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||||||   |||||||||||| || |||||| |||||||||||||||| |||||    
T  26988259 taacataaaagctaatttatttgcataaactatttttcataagctcaaaaataagtcaatc 26988319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 501 - 688
Target Start/End: Original strand, 45267446 - 45267631
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaag 595  Q
    ||||| |||||||||||| |||||||||||||||    ||||||||  |||||||| || ||||||||||||||||||||| ||| |||| |||||||||    
T  45267446 gtttggattgacttatttttgagcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaag 45267545  T
Q  596 atacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    ||||||||||||||    ||| ||||||||||||| ||| |||||||   ||||||||||||||| |||||| ||||||||||||||| ||||    
T  45267546 atacaattttcgtt----agtaagaacttatgaataaacataaaagc---ttatttgcataagctatttttcataagctcaaaaataatccaa 45267631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 6337827 - 6337701
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||    || ||||||||||||||    
T  6337827 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgtt----agcgagaacttatgaat 6337732  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||||||||  || ||||||||||||    
T  6337731 taacataaaagcttatttgtttgcataagct 6337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 533 - 690
Target Start/End: Original strand, 28690021 - 28690175
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatta 632  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||  ||    |||||||| || |||||||    
T  28690021 ataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttatt----agtgagaaattctgaatta 28690116  T
Q  633 acgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || |||||||||  ||||||||||||||| |||||| |||||||||||| ||| |||||    
T  28690117 acataaaagcttatttatttgcataagctatttttcataagctcaaaaacaagtcaatc 28690175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 26946176 - 26946019
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||    ||||| ||||| ||||    
T  26946176 aaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaattttcctt----agtgacaacttgtgaa 26946081  T
Q  630 ttaacgtaaaagcttg-ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||    ||||||||| |||||| ||||||||| ||||| |||||||||||||||| |||||    
T  26946080 ttagtacaaaagcttgtttatttacataagctgattttcataagctcaaaaataagtcaatc 26946019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 534 - 665
Target Start/End: Complemental strand, 3069922 - 3069794
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |    ||||||||||||||||||||    
T  3069922 taagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcact----agtgagaacttatgaattaa 3069827  T
Q  634 cgtaaaagctt-gttatttgcataagctgtttt 665  Q
    | |||||||||  |||||  |||||||||||||    
T  3069826 cataaaagcttatttattgtcataagctgtttt 3069794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 683
Target Start/End: Complemental strand, 16889036 - 16888891
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||    |||||||| |||||| |    
T  16889036 aaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcatt----agtgagaatttatgact 16888942  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataa 683  Q
    |||| |||||||||  ||||||||||||    |||||| |||||||||||||||    
T  16888941 taacataaaagcttatttatttgcataa---atttttcataagctcaaaaataa 16888891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 13038962 - 13039107
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||| | ||||||||    |||||||| ||||||||    
T  13038962 aaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgtt----agtgagaagttatgaat 13039057  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||| ||  ||||||||||||||| |||||| |||| ||||||    
T  13039058 taatataaaagtttatttatttgcataagctatttttcataagttcaaaa 13039107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 689
Target Start/End: Original strand, 35590145 - 35590301
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||| |||| |||||||||||||||||    ||||| |||||||||||||||||    
T  35590145 aaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaatt----ttcgtcagtgagaacttatgaat 35590240  T
Q  631 taacgt--aaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||| |  ||||  || ||||||| ||||||| |||||  |||||| ||||||||| ||||    
T  35590241 taacattaaaaacttttttatttggataagctattttttctaagcttaaaaataagtcaat 35590301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 499 - 687
Target Start/End: Original strand, 1005319 - 1005508
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||| ||||||| | |||||||||||||    ||||||||| |||||||||||||||||||| |||||||| |||||| ||| |||||||||    
T  1005319 ccgtttgaattggcttatttttaagcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaa 1005418  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagct-tgttatttgcataagctgtttttcgtaagctcaaaaataagcca 687  Q
    ||||||||||| | |    ||||||||||||||||||||| | ||||||   |||||||  |||||| |||||| |||||  ||||||| ||||    
T  1005419 gatacaatttttgat----agtgagaacttatgaattaacatcaaagctcatttatttgagtaagctatttttcataagcagaaaaatatgcca 1005508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 9572856 - 9572712
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||| || ||||||||||||| |||| |||||||||||||||| ||||| ||||||||||| | |||| |||    ||||||||||||||||    
T  9572856 aaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgtt----agtgagaacttatgaa 9572761  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||||  |||||||||  ||||||||||||||| |||||| |||||||||    
T  9572760 ttaatataaaagcttatttatttgcataagctatttttcataagctcaa 9572712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 532 - 689
Target Start/End: Original strand, 10365187 - 10365340
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||||||  ||||| ||||||||||||||    ||| | ||||| | ||||    
T  10365187 aataaacttttatgtattattaataagcttgtcaaagtagtttatgaaa-aacaaccgatgaatatacaattttcgtt----agtaaaaacttttaaatt 10365281  T
Q  632 aacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    ||| ||||||||| || ||||||||||||| |||||| |||||| ||||||||| ||||    
T  10365282 aacataaaagcttattcatttgcataagctatttttcataagcttaaaaataagtcaat 10365340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 47413388 - 47413543
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||||| ||||  ||||||||||| |||||  ||| ||||     || |||| |||    
T  47413388 aaatgagctttt-tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagatataatttgtgttggtgaa----aaattataaat 47413482  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||    
T  47413483 taacataaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatc 47413543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 535 - 690
Target Start/End: Complemental strand, 1565449 - 1565290
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgag---tgagaacttatgaat 630  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||| || ||| ||||||||||||||||||| | |||||   | |  | |||||||     
T  1565449 aagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaaataacatatgaagatacaattttcgctagtgagtacttatgatttatgaaa 1565350  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||||||  ||||||||| ||||| |||||| ||||||||||||||||||||||    
T  1565349 taacataaaagcttatttatttgca-aagctatttttcataagctcaaaaataagccaatc 1565290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 539 - 698
Target Start/End: Complemental strand, 26435238 - 26435082
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||||||||||||  |||| ||||||| ||||||||||||| |||   ||||||||||||| ||||||||    | ||||||||||||||||||| ||     
T  26435238 ttttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagatacatttttcgtt----actgagaacttatgaattaacatat 26435143  T
Q  639 aag-cttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    ||| ||  |||||||||||| || |||||| |||||| ||||||||| ||||| |||||||    
T  26435142 aagtctatttatttgcataaactatttttcataagcttaaaaataagtcaatccaaatggg 26435082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 18327539 - 18327617
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||| | ||||||||||||    
T  18327539 aaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatgaacacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 544 - 659
Target Start/End: Original strand, 23544819 - 23544931
Alignment:
Q  544 tgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagct 643  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||   |||||  ||||||||||| |||||||| ||||||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaatacatttt---ttcgttggtgagaactta-gaattaacataaaagct 23544914  T
Q  644 t-gttatttgcataagc 659  Q
    |  ||||||||||||||    
T  23544915 tatttatttgcataagc 23544931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 539 - 675
Target Start/End: Complemental strand, 22593470 - 22593337
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||||||||||||||||||||||| || | |||||| |||| | ||  |||| ||||||||||||| |||    ||||||||||||| ||||||| |||    
T  22593470 ttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgtt----agtgagaacttataaattaacataa 22593375  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctc 675  Q
    ||||||  |||||||||||||||||||| | |||||||    
T  22593374 aagcttatttatttgcataagctgttttgcataagctc 22593337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 531 - 615
Target Start/End: Complemental strand, 36423052 - 36422968
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||||  ||||||||||||||||| || ||||||| |||||    
T  36423052 aaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgag 36422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 46473109 - 46473254
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||| || || | |||||||| ||||||| ||||||||||||||||| | ||||||||    | | |||||||||||||    
T  46473109 aaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagataaagttttcgtt----aataagaacttatgaat 46473204  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  |||||||||||| || |||| |||||||||||||    
T  46473205 taatataaaatcttatttatttgcataacctattttccgtaagctcaaaa 46473254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 539 - 690
Target Start/End: Original strand, 41130017 - 41130165
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||||||||||||||||||||| || |||| |||||||  | ||||||||||||||||||||||||| ||    ||||  |||||| |||||||| |||    
T  41130017 ttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaattttcatt----agtgcaaacttaagaattaacataa 41130112  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || |||  ||||| | ||||| | |||||| ||||||| ||||||||||||||    
T  41130113 aatcttatttattagaataagttatttttcataagctcgaaaataagccaatc 41130165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 28122631 - 28122778
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||| ||||||||| |||||||||| ||||| | |||||||||||||||| || ||||||| |||||| |||||||||| || |  || ||||| |||||    
T  28122631 aaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaa--gaaaacttctgaat 28122728  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  |||||| ||||| || |||||| |||||||||||    
T  28122729 taatataaaagcttatttattttcataaactatttttcataagctcaaaa 28122778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 46501072 - 46500915
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||| ||||||| ||||||||| ||||||||||||  ||||||||||||| || |  |||||||||||||||||||   ||| ||||| ||||||| |||    
T  46501072 aaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattttc---cgttagtgaaaacttataaat 46500976  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     ||| |||||||||  ||||||||||||| | |||||  |||| | ||||||||| |||||    
T  46500975 caacataaaagcttatttatttgcataagttattttttataagataaaaaataagtcaatc 46500915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 535 - 677
Target Start/End: Complemental strand, 46689617 - 46689478
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||| |||||||||| ||||||| |||||| ||||| | | ||||||||||||| ||| ||||||||||    ||||||||||||||||||||     
T  46689617 aagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaaattttcgtt----agtgagaacttatgaattaat 46689522  T
Q  635 gtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
     ||| || ||  ||||||||||||| | |||||| |||||||||    
T  46689521 ataatagtttatttatttgcataagttatttttcataagctcaa 46689478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 644
Target Start/End: Original strand, 10082265 - 10082375
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    ||||||| |||||||| ||||| ||||| |||||||||||||||||| ||| ||||||||||||| ||||| |||| ||||    |||||||||||||||    
T  10082265 aaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaatacatttttggttc----gtgagaacttatgaa 10082360  T
Q  630 ttaacgtaaaagctt 644  Q
    ||||  |||||||||    
T  10082361 ttaatataaaagctt 10082375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 17628495 - 17628352
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| |||   ||||||||||||||||||||||    ||||||| ||| | |||    
T  17628495 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgtt----agtgagagcttctaaat 17628401  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||  |||||||||  |||||| |||||||| |||||| ||||||||||    
T  17628400 taaaataaaagcttatttatttacataagctatttttcataagctcaaa 17628352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 32497342 - 32497199
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| ||||  |||||| |||||||||||||||    ||||||| ||||| |||    
T  32497342 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaggatacaattttcgtt----agtgagagcttataaat 32497248  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||  |||||| ||  |||||| |||||||| |||||| ||||||||||    
T  32497247 taaaataaaagtttatttatttacataagctatttttcataagctcaaa 32497199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 546 - 690
Target Start/End: Complemental strand, 39658379 - 39658238
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttg 645  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||||||| |||||||||||| ||   ||| ||| |||||||||||| ||||||||      
T  39658379 tattattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaattttcgt-cg---gtgggaatttatgaattaacataaaagctac 39658284  T
Q  646 tt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || |||||||||||   |||||  || ||| |||||||||||||||    
T  39658283 tttatttgcataagtaatttttaatatgctaaaaaataagccaatc 39658238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 51162284 - 51162362
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||| || |||||||||| | ||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  51162284 aaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgtt 51162362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 35282665 - 35282539
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||| ||||| ||||||| |||| | ||| |||||||||||||||| ||||||||||||||||| ||||||  ||    ||||| |||||||||||    
T  35282665 aaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt----agtgaaaacttatgaat 35282570  T
Q  631 taacgtaaaag-cttgttatttgcataagct 660  Q
    |||  |||||| ||  |||||||||||||||    
T  35282569 taatataaaagtctatttatttgcataagct 35282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 540 - 615
Target Start/End: Original strand, 49971275 - 49971350
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||| ||||||| |||||||||| || ||||||||||||| |||| |||| |||||||||||||||||| |||||    
T  49971275 tttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattttcgttagtgag 49971350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 689
Target Start/End: Complemental strand, 10850142 - 10849982
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat-gaaagaacaac----ttatgaagatacaattttcgttcgtgagtgagaactta 625  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| |||| || |||    ||||||| ||||||||||||||    | ||| ||||||    
T  10850142 aaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaaaaaacttgtttatgaaaatacaattttcgtt----aatgaaaactta 10850047  T
Q  626 tgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    | ||||||| | |||||||  ||||||| ||||| | |||||| |||| | ||||||||| ||||    
T  10850046 taaattaacatgaaagcttatttatttgtataagttatttttcataagttaaaaaataagtcaat 10849982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 35897694 - 35897534
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaa----cttatgaagatacaattttcgttcgtgagtgagaacttat 626  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||||||| ||| ||    ||||| | |||||||||||| ||    ||||| || ||||    
T  35897694 aaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaattttcatt----agtgaaaatttat 35897599  T
Q  627 gaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     ||||||| |||||| || || |||| |||||||| |||||| |||| ||||||||||| |||||    
T  35897598 aaattaacataaaagtttatttatttacataagctatttttcataagttcaaaaataagtcaatc 35897534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 539 - 593
Target Start/End: Original strand, 39941533 - 39941587
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatga 593  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  39941533 ttttatgtattattcataagcttgtcaaagtagttaatgaaaaaacaacttatga 39941587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 29333444 - 29333513
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgt 612  Q
    |||||||||| ||||| |||| ||| ||| |||||||| ||||||||||||| |||||||||||||||||    
T  29333444 atgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaattttcgttcgt 29333513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 507 - 605
Target Start/End: Complemental strand, 31378850 - 31378748
Alignment:
Q  507 attgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaat 602  Q
    |||||||||||| | |||||||||||||||    |||||||| ||||||| | ||||||||||||||||||||||||| ||    |||| ||||||||||    
T  31378850 attgacttatttttaagcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaat 31378751  T
Q  603 ttt 605  Q
    |||    
T  31378750 ttt 31378748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 688
Target Start/End: Original strand, 391183 - 391345
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagt--------ttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaa 621  Q
    |||||||||||| || ||||||||||||||||||||| |||||        |||||||| |||||  || ||||||||||||||||||    || |||||    
T  391183 aaataagctttttatatattattcataagcttgtcaatgtagtattgtagtttatgaaaaaacaa--tacgaagatacaattttcgtt----agcgagaa 391276  T
Q  622 cttatgaattaacgt-aaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    ||||||||||||| | ||||||||  ||||||| ||||||| |||||| |||||| |||| ||||||||    
T  391277 cttatgaattaacataaaaagcttatttatttggataagctatttttcataagctaaaaattaagccaa 391345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 678
Target Start/End: Original strand, 15791399 - 15791542
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| ||    | ||||||||||||||||||||    | ||||| ||||| |||    
T  15791399 aaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaatcgttaatgaagatacaattttcgtt----aatgagagcttataaat 15791493  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||  |||||||||  |||||| |||||||| |||||| ||||||||||    
T  15791494 taaaataaaagcttatttatttacataagctatttttcataagctcaaa 15791542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 547 - 639
Target Start/End: Original strand, 18317032 - 18317120
Alignment:
Q  547 attattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    |||||||||||| |||||||||||| |||||||| |||| | |||||||||||||| ||||||    | ||||||||||||||| ||| ||||    
T  18317032 attattcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaatattcgtt----aatgagaacttatgaatcaacataaa 18317120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 614
Target Start/End: Original strand, 26542988 - 26543071
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    ||||| |||||||||||||||  ||||| |||| || ||||||||||||| ||||||||| |||  ||||||||||||| ||||    
T  26542988 aaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaagtacaattttcgttagtga 26543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 539 - 593
Target Start/End: Original strand, 39941393 - 39941446
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatga 593  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  39941393 ttttatgtattattcataagcttgtcaaagtag-ttatgaaaaaacaacttatga 39941446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 42591397 - 42591540
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||  ||||||| ||||| |||| |||||| ||||||||| || |  ||||||||||||| ||||||||    ||||| | ||||| |||    
T  42591397 aaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacacttttcgtt----agtgaaagcttataaat 42591492  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  ||||| |||  |||||| |||||||| |||||| |||||||||    
T  42591493 taaaataaaaacttatttatttacataagctatttttcataagctcaa 42591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 565 - 678
Target Start/End: Complemental strand, 3116099 - 3115989
Alignment:
Q  565 aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtt 663  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||    ||| ||| ||||| ||||||  |||||||||  |||||| |||||| | ||    
T  3116099 aaggtagtttatgaaaaaaccatttatgaagatacaattttcgtt----agtaagatcttataaattaaaataaaagcttacttatttacataagttatt 3116004  T
Q  664 tttcgtaagctcaaa 678  Q
    |||| ||||||||||    
T  3116003 tttcataagctcaaa 3115989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 37156989 - 37156846
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||| || |||||||||| |||||  ||| |||||||||||||||  || ||| |||||| |||||||||||| |    ||| ||| |||||||||    
T  37156989 aaataagcattaatgtattatttataagtatgttaaggtagtttatgaa--aaaaacctatgaatatacaattttcgct----agtaagatcttatgaat 37156896  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||| |||||||||  ||||||||||||| | |||||  |||| ||||||    
T  37156895 taacataaaagcttaattatttgcataagttctttttgataagttcaaaa 37156846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 15631919 - 15632003
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||| |||||||||||||| ||||| |||| || ||| ||||||||| |||   ||||||| |||||||||||||| |||||    
T  15631919 aaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaattttcgttagtgag 15632003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 679
Target Start/End: Original strand, 17814214 - 17814350
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||    ||||||| ||||||||||||||    ||| |||||||||  |||||  |||    
T  17814214 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgtt----agtcagaacttatagattaaaataa 17814308  T
Q  639 aagcttgtt-atttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||||| || |||| |||||||| |||||| |||||||||||    
T  17814309 aagcttatttatttacataagctatttttcataagctcaaaa 17814350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 19220189 - 19220333
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||| | || | |||||||||||||||| ||| | |||||||||| ||||||||| |    | |||||  |||| |||    
T  19220189 aaataagtttttatgtattatttataggttttt-aaggtagtttatgaaaaaactatttatgaagatgcaattttcgat----aatgagagattataaat 19220283  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  |||||||||||| || |||||| |||||||||||    
T  19220284 taaaataaaagcttatttatttgcataaactatttttcataagctcaaaa 19220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 533 - 580
Target Start/End: Complemental strand, 1265762 - 1265715
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||    
T  1265762 ataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 537 - 633
Target Start/End: Original strand, 12256628 - 12256719
Alignment:
Q  537 gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    |||||||| ||||||| ||||| ||||  | ||||||||||||| ||||| |||||||| |||||||||||||    ||| ||||||||||||||||    
T  12256628 gcttttatatattatttataagattgttgatgtagtttatgaaa-aacaatttatgaaggtacaattttcgtt----agtaagaacttatgaattaa 12256719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 634
Target Start/End: Original strand, 16225524 - 16225621
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||| | ||||| |||| |||||| |||| |||| ||||||||||||||||||| |     ||||| ||||||||||||| |||    
T  16225524 aaataagtttttatgtattaattataag-ttgttaaggtaatttaggaaaaaacaacttatgaagatacagt-----ttcgttagtgagaacttataaat 16225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 546 - 609
Target Start/End: Original strand, 50919517 - 50919580
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| ||||| ||||||| ||||||||| ||| ||||  ||||||||||||||||||||||    
T  50919517 tattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttcgtt 50919580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 5243474 - 5243397
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| |||| ||||||||| ||||| || | |||||||||||||||| || |  ||||||||||||||||||||||    
T  5243474 aaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatacaattttcgtt 5243397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 665
Target Start/End: Original strand, 20169279 - 20169410
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||| ||||| || | ||  |||||||||||| ||||  |||| || ||||||||    | ||| | ||||||||||  |||    
T  20169279 aaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaatt----tccgtcaatgagaacttaaaaat 20169374  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttt 665  Q
    |||| ||||| |||  ||||||||||||||||||||    
T  20169375 taacataaaaacttatttatttgcataagctgtttt 20169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 538 - 580
Target Start/End: Original strand, 39941463 - 39941505
Alignment:
Q  538 cttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  39941463 cttttatgtattattcataagcttgtcaaaatagtttatgaaa 39941505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 641
Target Start/End: Original strand, 41003402 - 41003508
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    ||||||| |||||||||||||| ||||| ||||| |||||||||||||||| |||| ||||  |||||| ||||||  ||    ||||||||||||| ||    
T  41003402 aaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaa-aacagcttactaagatataatttttatt----agtgagaacttattaa 41003496  T
Q  630 ttaacgtaaaag 641  Q
    ||||| ||||||    
T  41003497 ttaacataaaag 41003508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 28870297 - 28870374
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||||| ||| |||||||||  ||||||||| ||| | |||||| |||||| |||| ||||||||||    
T  28870297 agtgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttcataagctaaaaattaagccaatc 28870374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 633
Target Start/End: Complemental strand, 49738363 - 49738274
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    ||||||| |||||||||||| |||||||  |||||| | ||| || || ||||||| ||||||||||||||    ||||||||||||||||||||    
T  49738363 ttttatgaattattcataagtttgtcaaaatagtttgttaaaaaa-aatttatgaaaatacaattttcgtt----agtgagaacttatgaattaa 49738274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 391184 - 391140
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||    
T  391184 ttatttgcataagctgttttgcataacctcaaaaataagccaatc 391140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 539 - 607
Target Start/End: Original strand, 25485771 - 25485839
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg 607  Q
    |||||| | |||||||| | ||| | |||||||||||||||| ||||| ||||||||||| ||||||||    
T  25485771 ttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaaattttcg 25485839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 26936874 - 26936920
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 578  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  26936874 aaataagcttctatgtat-actcataagcttgtcaaggtagtttatga 26936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 594
Target Start/End: Original strand, 34265596 - 34265647
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    |||||||||| ||||  |||| |||||||||||||||| |||||||||||||    
T  34265596 atgtattatttataaatttgttaaggtagtttatgaaaaaacaacttatgaa 34265647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 39941605 - 39941664
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    |||| |||||||| ||||| ||||||||  |||||||||||| ||||| |||||||||||    
T  39941605 ttttctgtattatacataaacttgtcaaattagtttatgaaaaaacaatttatgaagata 39941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 542 - 580
Target Start/End: Complemental strand, 9177771 - 9177733
Alignment:
Q  542 tatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  9177771 tatgtattattcataagcttgtcaacgtagtctatgaaa 9177733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 614
Target Start/End: Original strand, 19284911 - 19284996
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaa--caacttatgaagatacaattttcgttcgtga 614  Q
    ||||||||| |||||||||||| ||||| |||| ||| || ||||| ||| ||  ||  |||||||||||||||||||||| ||||    
T  19284911 aaataagctattatgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaagatacaattttcgttagtga 19284996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 507 - 642
Target Start/End: Original strand, 38781060 - 38781200
Alignment:
Q  507 attgacttatttatgagcttatgcaaataagc---ttttatgtattattcataagcttgtcaaggtag------tttatgaaagaacaacttatgaagat 597  Q
    |||| ||||||| |||||||||||||||||     |||||||||| ||||| ||||||||| | ||||      ||||||||| | || |||||||||      
T  38781060 attggcttatttttgagcttatgcaaataaataagttttatgtatcattcaaaagcttgtcgatgtagaagtagtttatgaaaaatcagcttatgaagcc 38781159  T
Q  598 acaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||| |||    ||||||||||||||||||||| |||||||    
T  38781160 acaattttggtt----agtgagaacttatgaattaacataaaagc 38781200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 646 - 679
Target Start/End: Complemental strand, 20169280 - 20169247
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||||||||||||||||||||| |||||||||||    
T  20169280 ttatttgcataagctgtttttcataagctcaaaa 20169247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 539 - 672
Target Start/End: Original strand, 22103134 - 22103262
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||  | ||||||| ||||||||||||||    ||| |||||||||  |||||  |||    
T  22103134 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aatgagttatgaaaatacaattttcgtt----agttagaacttatagattaaaataa 22103227  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaag 672  Q
    ||||||  |||||| |||||||| |||||| ||||    
T  22103228 aagcttctttatttacataagctatttttcataag 22103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 37431228 - 37431305
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||| |||||||||||||||  |||||||| || ||| ||||||| | |||||| | |||||||||||||| |||||    
T  37431228 agtgaaaacttatgaattaacaaaaaagcttatttattcgcataagttatttttcatgagctcaaaaataagtcaatc 37431305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 6e-46; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 530 - 690
Target Start/End: Original strand, 7267789 - 7267953
Alignment:
Q  530 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtg---agtgagaacttat 626  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | |||   ||||||||||||     
T  7267789 caaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattttcgctggtgagaagtgagaacttac 7267888  T
Q  627 gaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||| |||||||||  ||||||||||||| |||| ||| |||||| |||||||||||||||    
T  7267889 gaattaacataaaagcttatttatttgcataagttgttattcataagcttaaaaataagccaatc 7267953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 683
Target Start/End: Complemental strand, 21025298 - 21025141
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaactt----at 626  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| || | | |||||||||||||| ||||||  |||||||||||||    ||    
T  21025298 aaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaatgttcgttactgagtgagaacttataaat 21025199  T
Q  627 gaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataa 683  Q
     ||||||| |||||||||  ||||||||||||||| |||||  |||||| ||||||||    
T  21025198 aaattaacataaaagcttatttatttgcataagctatttttgataagctaaaaaataa 21025141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 688
Target Start/End: Complemental strand, 1240682 - 1240527
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||| |||||| ||    |||||||| ||||| |    
T  1240682 aaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattttcatt----agtgagaatttatgta 1240587  T
Q  630 ttaacgtaaaagcttgtta-tttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    ||||  |||||  || ||| |||||| ||||| |||||| ||||||||||||||||||||    
T  1240586 ttaaaataaaaatttattactttgcaaaagctatttttcataagctcaaaaataagccaa 1240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 501 - 690
Target Start/End: Complemental strand, 10755385 - 10755198
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||||||| | |||||||||||||||    ||||||| ||||||||||||||||||||||||||  |||||||| || | ||||||||      
T  10755385 gtttggattggcttattttttagcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa-- 10755288  T
Q  597 tacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     ||||||||||||    ||| ||||||||||||||||| |||||||||  |||||||||||| || ||||||  ||||||||||||||| |||||    
T  10755287 -acaattttcgtt----agtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaaaaataagtcaatc 10755198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 21891409 - 21891270
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| ||| || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||    |  |||||||||||||    
T  21891409 aaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagatagaattttcgttc----gcaagaacttatgaat 21891314  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagc 673  Q
    |||| ||||||||| || ||| ||||||||| |||||| |||||    
T  21891313 taacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 499 - 680
Target Start/End: Complemental strand, 2034336 - 2034154
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||| ||| ||| |||||||||||||||||    |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||  ||    
T  2034336 ccgtttggattggcttgtttttgagcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaa 2034237  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaa 680  Q
    ||||||||||||||     ||| | ||||||||| | ||| ||||||||| || ||||||||||||| ||| || ||||||| ||||    
T  2034236 gatacaattttcgta----agtaataacttatgattcaacataaaagcttatttatttgcataagctatttatcataagctcgaaaa 2034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 2027247 - 2027092
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||| |||||||| ||| ||||||||  ||||||||||| |||| ||||||||||||||| ||| |||    ||| |||||||||||||    
T  2027247 aaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgtt----agtaagaacttatgaat 2027152  T
Q  631 taacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |||||| || | |||||||||||||| |||||| |||||| ||||||||| |||||    
T  2027151 taacataaaagtttatctatttgcataagctatttttcataagct-aaaaataagtcaatc 2027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 676
Target Start/End: Complemental strand, 32675960 - 32675818
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| ||||||||||||||||   ||||| |||||||||| || |||||||||||||||||||||| ||    |||||||||||||||||    
T  32675960 aaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcatt----agtgagaacttatgaat 32675865  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctca 676  Q
    |||  ||||| |||  ||||||||||||| | |||||| ||||||||    
T  32675864 taatataaaaacttatttatttgcataagttatttttcataagctca 32675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 534 - 690
Target Start/End: Original strand, 8014806 - 8014959
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||| |||    ||||| |||| || ||||||    
T  8014806 taagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggtt----agtgaaaactgataaattaa 8014901  T
Q  634 cgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    | ||||||||| || ||||||||| ||| |||||| |||||| ||| |||||| ||||    
T  8014902 cataaaagcttattaatttgcatatgctatttttcataagcttaaatataagcaaatc 8014959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 3211072 - 3210906
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-----agaacaacttatgaagatacaattttcgttcgtgag---tgagaac 622  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||     | |||| |||||||||||||||||||| ||  ||||   |||||||    
T  3211072 aaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaaaaaaaacagcttatgaagatacaattttcattaatgagagctgagaac 3210973  T
Q  623 ttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||  ||||||| ||||| ||| |||||    
T  3210972 ttatgaattaacataaaagcttatttatttgcataagctatttt--gtaagctaaaaaaaaagtcaatc 3210906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 23239262 - 23239405
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||||||||||| || || |||||| ||| | ||| |||||| ||||||| |||| ||    |||||||||||||||||    
T  23239262 aaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgatacaactttcctt----agtgagaacttatgaat 23239357  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  |||||||||  ||||||||||||||| |||||| |||||||||    
T  23239358 taatataaaagcttatttatttgcataagctatttttcataagctcaa 23239405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 531 - 644
Target Start/End: Original strand, 2255749 - 2255858
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||| ||||||||||||| |||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||| | |    ||||||||| |||||||    
T  2255749 aaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggt----agtgagaacatatgaat 2255844  T
Q  631 taacgtaaaagctt 644  Q
    |||| |||||||||    
T  2255845 taacataaaagctt 2255858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 531 - 694
Target Start/End: Original strand, 10687322 - 10687484
Alignment:
Q  531 aaataagcttttatgtatt---attcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatg 627  Q
    ||||||||||| |||||||   |||||||||| | | ||||||||||||| || ||||||||||| ||||||||||||||||    || |||||||||||    
T  10687322 aaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattttcgtt----agcgagaacttatg 10687417  T
Q  628 aattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaa 694  Q
    || | || |||||||||  |||||||||||| ||  ||||| |||||| |||||||||||||||||||    
T  10687418 aactgacataaaagcttatttatttgcataaact-attttcataagctaaaaaataagccaatctaaa 10687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 10874001 - 10874125
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||  |||||| |||||||||| |||||||||||||| | |||| ||||||||||||||||||| |||     |||| |||||||||||    
T  10874001 aaataagcttttat--attattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagtt----ggtgaaaacttatgaat 10874094  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||||||||  |||||||||||||||    
T  10874095 taacataaaagcttatttatttgcataagct 10874125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 667
Target Start/End: Original strand, 6758642 - 6758776
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||| | |||||| ||||||||||| |||||||||||||||| |  ||||||| ||||||||| |||||||    |||||||||||||||||    
T  6758642 aaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaatttcgtt----agtgagaacttatgaat 6758737  T
Q  631 taacgt-aaaagctt-gttatttgcataagctgtttttc 667  Q
    |||  | ||||||||  ||||||||||||||| ||||||    
T  6758738 taatataaaaagcttatttatttgcataagctatttttc 6758776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 532 - 690
Target Start/End: Complemental strand, 9202473 - 9202314
Alignment:
Q  532 aataagcttttatgtattattcataagcttgt----caaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatg 627  Q
    |||||||||||  ||||||| |||||||||||    ||||| ||||||||||| |||| | |||||||||||||||||  ||    ||||| ||||||||    
T  9202473 aataagcttttccgtattatacataagcttgtaactcaaggcagtttatgaaaaaacagcatatgaagatacaatttttatt----agtgataacttatg 9202378  T
Q  628 aattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||||||| || |||  |||||||| |||||| |||||| |||||||||||||||    
T  9202377 aattaacataaaagcttatttattaacataagctatttttcataagctaaaaaataagccaatc 9202314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 29623548 - 29623404
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||||| ||||||| || || |||| || ||||||||||||| ||||||||||||| ||| | ||||||||    |||||||||||||||||    
T  29623548 aaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaagttttcgtt----agtgagaacttatgaat 29623453  T
Q  631 taacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||| ||||   |  ||||||||||||||| |||||| ||| |||||||    
T  29623452 taacataaatcttatttatttgcataagctatttttcataaactcaaaa 29623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 556 - 690
Target Start/End: Complemental strand, 35071475 - 35071343
Alignment:
Q  556 aagcttgtcaaggtagtttatgaaagaacaa-cttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgc 653  Q
    ||||||||||||||||||||||||| ||  | ||||||||||| |||| ||  || |||||    ||||||||||||||| ||||||||| || ||||||    
T  35071475 aagcttgtcaaggtagtttatgaaaaaaatagcttatgaagatgcaatgtttttttgtgag----aacttatgaattaacataaaagcttatttatttgc 35071380  T
Q  654 ataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| |||||| |||||| |||||||||||||||    
T  35071379 ataagctatttttcataagctaaaaaataagccaatc 35071343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 602
Target Start/End: Original strand, 24625866 - 24625937
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaat 602  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |  | ||||||||||||||||    
T  24625866 aaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaagatacaat 24625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 7446933 - 7446859
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||||||| |||||| |||||||||| ||| ||||| |||||| ||| ||||||||||||||||||||||||    
T  7446933 aaataagctttaatgtatcattcataagcctgttaaggttgtttataaaacaacaacttatgaagatacaatttt 7446859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 539 - 634
Target Start/End: Original strand, 16589774 - 16589865
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||  |||||||||    | |||||||||||||||||||    
T  16589774 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgtt----attgagaacttatgaattaac 16589865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 539 - 634
Target Start/End: Complemental strand, 16605606 - 16605515
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||  |||||||||    | |||||||||||||||||||    
T  16605606 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgtt----attgagaacttatgaattaac 16605515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 531 - 699
Target Start/End: Original strand, 1172351 - 1172530
Alignment:
Q  531 aaataagcttttatgtattattcataag------cttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaactt 624  Q
    |||| |||||||||||||||||||||||      ||||||||||| | |||||||| |||||||| |||| ||||||||||| || ||||  ||||| ||    
T  1172351 aaatgagcttttatgtattattcataagcttaagcttgtcaaggttgcttatgaaaaaacaacttgtgaaaatacaattttcattagtga--gagaattt 1172448  T
Q  625 atgaattaacgtaaaa-------gcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    |||||||||| |||||         || || |||||| ||||| |||||| ||||||||||||||||| |||| ||||||||    
T  1172449 atgaattaacataaaaatttttttttttttttttgcaaaagctatttttcataagctcaaaaataagctaatccaaatgggt 1172530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 8011117 - 8010973
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg--aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatga 628  Q
    |||||||| || || ||||||| ||||| ||||||||||||||| ||  ||| || |||||||||| ||||||||||||||    ||| ||| |||||||    
T  8011117 aaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaaaaaaacttatgaatatacaattttcgtt----agtaagatcttatga 8011022  T
Q  629 attaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    | |||| |||||||||  ||||||||||||||| |||||| |||||||||    
T  8011021 a-taacataaaagcttaattatttgcataagctttttttcataagctcaa 8010973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 549 - 641
Target Start/End: Complemental strand, 25430819 - 25430731
Alignment:
Q  549 tattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaag 641  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||     || |||||||| ||||||||||| |||||||    
T  25430819 tattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaatttt-----gtcagtgagaaattatgaattaaggtaaaag 25430731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 6776823 - 6776907
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||| || ||| ||||||||||| ||||||||||||| || || ||||||||||||||||| |||| || |||||    
T  6776823 aaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgag 6776907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 32165331 - 32165187
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | ||| |||||||||||| ||||  ||||||||||||||||||||||    ||||||| ||||| |||    
T  32165331 aaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgtt----agtgagagcttataaat 32165237  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  |||||| |||||||| |||||| |||||||||||    
T  32165236 taaaataaaaacttatttatttacataagctatttttcataagctcaaaa 32165187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 535 - 694
Target Start/End: Original strand, 34509931 - 34510086
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| | || |  ||||||||||| ||||  |||| ||     | ||||||| |||||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagatataattcccgttagt-----aaaacttataaattaac 34510025  T
Q  635 gtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaa 694  Q
     |||||||||  ||| ||||||| ||| |||||| ||| |||||||| |||||||||||||    
T  34510026 ataaaagcttacttaattgcatatgctatttttcataaactcaaaaacaagccaatctaaa 34510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 549 - 634
Target Start/End: Original strand, 13429488 - 13429570
Alignment:
Q  549 tattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||| ||||||||||||| ||||  |||||| |||||||||||| |   | |||||||||||||||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttcat---ttagtgagaacttatgaattaac 13429570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 29052348 - 29052492
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||||||||||||| ||||| |||| |||||| ||||||||| ||||  |||||| ||||||||| |||||     |||||| ||||| |||    
T  29052348 aaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtt----tgtgagagcttataaat 29052443  T
Q  631 taacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||  |  |||||| |||||||| |||||| |||||||||||    
T  29052444 taaaataaaacttatttatttacataagctatttttcataagctcaaaa 29052492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 10184400 - 10184258
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||| ||||||| ||||| || | |||||||||||||||| ||||| ||||||||| ||||||||||||    ||| ||| ||||| |||    
T  10184400 aaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatgaagaaacaattttcgtt----agtaagagcttataaat 10184306  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  |||||||||  ||||||  ||||||| |||||| |||||||||    
T  10184305 taaaataaaagcttatttatttatataagctatttttcataagctcaa 10184258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 640
Target Start/End: Original strand, 10619231 - 10619351
Alignment:
Q  522 agcttatgcaaataa--gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgag 619  Q
    |||||||||||||||  || || ||||||||||  |||| |||| |||||||||||||||| ||||||||||||| |||||| |    ||||| ||| ||    
T  10619231 agcttatgcaaataaatgcattaatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaaataaatttcgttagtaag 10619330  T
Q  620 aacttatgaattaacgtaaaa 640  Q
    | ||||||||||||| |||||    
T  10619331 atcttatgaattaacataaaa 10619351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 595
Target Start/End: Original strand, 6632674 - 6632738
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaag 595  Q
    ||||| |||||||||||||||| |||| ||||| || ||||||||||||| ||||||||||||||    
T  6632674 aaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttatgaag 6632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 614 - 689
Target Start/End: Complemental strand, 9201713 - 9201637
Alignment:
Q  614 agtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||  |||| | |||||| ||||||||||||||    
T  9201713 agtgagaacttatgaattaacataaaagcttatttatttgcataagcgattttccataagctaaaaaataagccaat 9201637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 10054396 - 10054469
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||| || || ||||  |||||||||||||    
T  10054396 aaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat--agatacaattttc 10054469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 32615485 - 32615341
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | ||||||||| |||||| ||| | ||||||||||||||||||||||    ||||||| | ||| |||    
T  32615485 aaataagtttttatgtattatttataaattttt-aaggtagttgatgaaaaaactatttatgaagatacaattttcgtt----agtgagagcatataaat 32615391  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  |||||| |||||| | |||||| |||||||||||    
T  32615390 taaaataaaagcttacttatttacataagttatttttcataagctcaaaa 32615341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 615
Target Start/End: Original strand, 6958649 - 6958723
Alignment:
Q  541 ttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||| |||||||||||| |||||||||||| ||||| | || ||| |||||||||||||||| || |||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgag 6958723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 648 - 698
Target Start/End: Original strand, 9201803 - 9201853
Alignment:
Q  648 atttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  9201803 atttgcataagctgttttgcgtaagctcaaaattaagccaatcaaaatggg 9201853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 608 - 684
Target Start/End: Complemental strand, 12816900 - 12816822
Alignment:
Q  608 ttcgtgagtgagaactta-tgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    ||||| |||||||||||| ||||||||| ||||||||| || |||||||||| || |||||| ||||||||||||||||    
T  12816900 ttcgttagtgagaacttaatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaaaaataag 12816822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 524 - 690
Target Start/End: Complemental strand, 21871365 - 21871199
Alignment:
Q  524 cttatgcaaataag----cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgag 619  Q
    ||||||||||||||    ||||||||||||||| |||| |||||||||||||||||||| | |  | ||||||| |||  ||||||||||    ||||||    
T  21871365 cttatgcaaataagtaaacttttatgtattattgataa-cttgtcaaggtagtttatgagaaagtagcttatgatgatttaattttcgtt----agtgag 21871271  T
Q  620 aacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     | |||||||| ||| ||||| |||  ||||||| |||| || |||||| |||||| ||||||||| |||||    
T  21871270 catttatgaatcaacataaaaacttatttatttgtataaactatttttcataagctaaaaaataagtcaatc 21871199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 30533995 - 30534044
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||||    
T  30533995 aaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaa 30534044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 640
Target Start/End: Complemental strand, 3829990 - 3829885
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||| | ||||||||||  || | | |||||||||||||| ||||||||||||||||| |||||| |||    | | |||||||||||||    
T  3829990 aaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaaatttttgtt----aataagaacttatgaat 3829895  T
Q  631 taacgtaaaa 640  Q
    |||| |||||    
T  3829894 taacataaaa 3829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 12817163 - 12817116
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 578  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  12817163 aaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 605
Target Start/End: Original strand, 34413342 - 34413408
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||||||||||| ||||| |||| || ||||||||||||| ||||| |||| || ||||||||||    
T  34413342 ttttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaatttt 34413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 991354 - 991277
Alignment:
Q  531 aaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg 607  Q
    ||||||||||||||||| ||||  ||||| ||||||||  |||||||| || ||||| | ||||||||||||||||||    
T  991354 aaataagcttttatgtaatattagataagtttgtcaagtcagtttatggaaaaacaattgatgaagatacaattttcg 991277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 677
Target Start/End: Complemental strand, 21610111 - 21609977
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaa 639  Q
    |||||| |||||| |||||||||| || ||||||||||||| || |  ||||||| ||| ||||||||||    ||| ||||||||| ||||||  ||||    
T  21610111 tttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataattttcgtt----agtaagaacttataaattaaaataaa 21610016  T
Q  640 agctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    | |||  ||||||||||||  |||||| | |||||||||    
T  21610015 aacttatttatttgcataaattgttttgcataagctcaa 21609977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 633
Target Start/End: Complemental strand, 34801120 - 34801023
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||||| ||||||||||||| | || ||| |||||||||||| |||||| || | ||||||||||||  ||    |||||||||||||||||    
T  34801120 aaataaacttttatttattattcataagttggt-aagatagtttatgaaaaaacaacctacggagatacaattttaatt----agtgagaacttatgaat 34801026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 579
Target Start/End: Complemental strand, 2040257 - 2040209
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    |||||||||||||| ||||||||||||| |||| |||||| ||||||||    
T  2040257 aaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 589 - 677
Target Start/End: Original strand, 6752885 - 6752970
Alignment:
Q  589 tatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaa 677  Q
    |||||||||||||||||| ||    |||||| | |||||||||||  ||||||||| || ||||||||||||| |||||| |||||||||    
T  6752885 tatgaagatacaattttcatt----agtgaggatttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaa 6752970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 15054654 - 15054578
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||| ||| |||||||| | ||||| |||| || ||| ||||||||| | ||| ||||||||||||||||||||||    
T  15054654 ataagttttcatgtattagttataagtttgtaaaagtattttatgaaaaagcaatttatgaagatacaattttcgtt 15054578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 615
Target Start/End: Complemental strand, 12817010 - 12816956
Alignment:
Q  560 ttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||||||| |||||    
T  12817010 ttgtcaaggtggtttgtgaaa-aacaacttatgaagataccattttcgttagtgag 12816956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 690
Target Start/End: Original strand, 35111394 - 35111449
Alignment:
Q  636 taaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||| |||||||||||||||||| | |||||| |||||| ||||||||    
T  35111394 taaaagcttgtttatttgcataagctgttttgcataagcttaaaaattagccaatc 35111449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 4272405 - 4272475
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||||||||| |||||| || | || ||||||||| ||| ||||| |||| |||| ||||||||||||    
T  4272405 ttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgtt 4272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 9894781 - 9894830
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||| ||||||||||||||| ||||| |||| |||||| |||||||||    
T  9894781 aaataatcttttatgtattatttataagtttgttaaggtattttatgaaa 9894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 512 - 585
Target Start/End: Complemental strand, 10730331 - 10730258
Alignment:
Q  512 cttatttatgagcttatgcaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaaca 585  Q
    |||||||  ||| ||||||||||||   ||||||||||||| |||| ||||| || ||||||||||||| ||||    
T  10730331 cttattttagagtttatgcaaataaatatttatgtattatttataaacttgttaatgtagtttatgaaaaaaca 10730258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 9e-45; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 501 - 690
Target Start/End: Original strand, 29378626 - 29378816
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||||| | |||||||||||||||    |||||||||||||||||| || || ||||||||||||||||||||| |||| ||||||||||    
T  29378626 gtttggattggcttatctttgagcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaaga 29378725  T
Q  597 tacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||    ||| |||||||||||||||||||||||||||  ||||||||||||||| |||||| ||| |||||||||||| |||||    
T  29378726 tacaattttcgtt----agtaagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcataaactcaaaaataagtcaatc 29378816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 29390621 - 29390466
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    ||  |||| ||||||||    
T  29390621 aaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa-aacaacttatgaagatacaattttcgtt----agctagaatttatgaat 29390527  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||||||| || |||||||||| || |||||| |||||||||||||||| |||||    
T  29390526 taacataaaagcttatttatttgcataaactatttttcataagctcaaaaataagtcaatc 29390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 531 - 689
Target Start/End: Original strand, 34922946 - 34923103
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatga 628  Q
    |||||||||||||||||||||||||||| |||||||||||||||||   ||| |||| ||| |||||||||| ||||||||    |||||||||||||||    
T  34922946 aaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgtt----agtgagaacttatga 34923041  T
Q  629 attaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    | |||| |||||||||  ||||||||||||||| |||||  |||||||||||||||||||||    
T  34923042 actaacataaaagcttatttatttgcataagctattttttataagctcaaaaataagccaat 34923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 535 - 685
Target Start/End: Complemental strand, 14691366 - 14691219
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||| ||||||||||    |||||||||||||||||||||    
T  14691366 aagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgtt----agtgagaacttatgaattaac 14691271  T
Q  635 gtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagc 685  Q
     |||||| ||  |||||||||| | || |||||| |||||| ||||||||||    
T  14691270 ataaaaggttatttatttgcatgaactatttttcataagctaaaaaataagc 14691219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 501 - 690
Target Start/End: Original strand, 47511024 - 47511216
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||||||| |||||||||||||||    ||||||||||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||||    
T  47511024 gtttggattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaaga 47511123  T
Q  597 tacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||| ||   | |||||||||||||||||||| |||||  ||  |||  |||||||||| |||||| ||| ||||||||||| ||||||    
T  47511124 tacaattttcatt--ggggtgagaacttatgaattaacataaaaaattatttaactgcataagctatttttcataacctcaaaaataaaccaatc 47511216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 38372573 - 38372729
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| |||| | || || | ||||| ||||||||||||    |||||||||||||||||    
T  38372573 aaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattttcgtt----agtgagaacttatgaat 38372668  T
Q  631 taacgtaaaagct-tgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||||||   |||||||||| |||| |||||| ||||||||||||||| ||||||    
T  38372669 taacataaaagctgatttatttgcattagctatttttcataagctcaaaaataacccaatc 38372729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 44613544 - 44613401
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||  ||    | | |||||||||||||    
T  44613544 aaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaatttttatt----aattagaacttatgaat 44613449  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  |||||||||  ||||||||||||||| |||||| |||||||||    
T  44613448 taatataaaagcttatttatttgcataagctatttttcataagctcaa 44613401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 20888588 - 20888739
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||| | |    |||| ||||||| ||    
T  20888588 aaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttcttcc----gtgaaaacttataaa 20888683  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    ||||| ||||| |||  ||||||||||||| | |||||| ||||||||||||||||    
T  20888684 ttaacataaaaacttacttatttgcataagttatttttcataagctcaaaaataag 20888739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 535 - 657
Target Start/End: Original strand, 30181569 - 30181688
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||  ||||| ||    |||| ||||||||||||||||    
T  30181569 aagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatactgttttcatt----agtgggaacttatgaattaac 30181664  T
Q  635 gtaaaagctt-gttatttgcataa 657  Q
     |||||||||  ||||||||||||    
T  30181665 ataaaagcttatttatttgcataa 30181688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 539 - 679
Target Start/End: Original strand, 22032785 - 22032922
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| |||||| ||| || ||||||||||||| ||||| |||||||| |||||||||||||    ||||||||||||| ||||||  |||    
T  22032785 ttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgtt----agtgagaacttataaattaagataa 22032880  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    || |||  ||||||||||||||| |||||| |||||||||||    
T  22032881 aaacttatttatttgcataagctttttttcataagctcaaaa 22032922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 545 - 690
Target Start/End: Original strand, 39279458 - 39279601
Alignment:
Q  545 gtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt 644  Q
    ||||||||||||||||||| ||||| |||||||||| | || |||| ||||||||||||||||||  |   ||||||| ||||||||||| |||||||||    
T  39279458 gtattattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaat---tgagaacctatgaattaacataaaagctt 39279554  T
Q  645 gtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
     || ||||| ||||||| |||||| |||||||||||  |||||||||    
T  39279555 atttatttgtataagctatttttcataagctcaaaatcaagccaatc 39279601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 41094233 - 41094309
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||  || |||||||||||||||||||||||||    
T  41094233 aaataagcctttatgtattactcataagcttgtcaaggtggtttatgaa--aaaaacttatgaagatacaattttcgtt 41094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 35809105 - 35809248
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||| || |||||||||| |||||||||| || ||||||||||||| ||||||||| ||| ||||||||    ||||  ||| |||  ||||||||    
T  35809105 aaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaatt----ttcgccagtaagattttatgaat 35809200  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||| |||||||||  |||||| |||||||| |||||| |||||||||    
T  35809201 taacataaaagcttaattatttacataagctctttttcataagctcaa 35809248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 543 - 677
Target Start/End: Complemental strand, 47654473 - 47654342
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||  |||||||||| || ||||||||||||| ||||  |||||||| |||||||||||||    ||||||||||||||||||||  ||||| |    
T  47654473 atgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgtt----agtgagaacttatgaattaagataaaaac 47654378  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||  ||||||||||||| | |||||| |||||||||    
T  47654377 ttatttatttgcataagatctttttcataagctcaa 47654342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 683
Target Start/End: Complemental strand, 32917663 - 32917514
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||| |||||||||||| |||  || ||||| |||| ||||||||||||||||| |||||| |||    ||||||||||||| | |    
T  32917663 aaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgtt----agtgagaacttataatt 32917568  T
Q  631 taacgtaaaagc-ttgttatttgcataagctgtttttcgtaagctcaaaaataa 683  Q
    |||| ||||||| |  ||||| |||||| || |||||  |||||||||||||||    
T  32917567 taacttaaaagcatatttattggcataacctattttttataagctcaaaaataa 32917514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 46743965 - 46744094
Alignment:
Q  531 aaataagcttttatgtattatt----cataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttat 626  Q
    ||||||| ||||||||||||||    ||||||||||||| ||||||| |||||| |||| | |||||||||||||||||||||    ||||||||||||     
T  46743965 aaataagattttatgtattatttatccataagcttgtca-ggtagttaatgaaaaaacagcatatgaagatacaattttcgtt----agtgagaacttac 46744059  T
Q  627 gaattaacgtaaaagctt-gttatttgcataagct 660  Q
    |||||||| |||||||||  |||||| ||||||||    
T  46744060 gaattaacataaaagcttatttattttcataagct 46744094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 615 - 690
Target Start/End: Complemental strand, 40629423 - 40629348
Alignment:
Q  615 gtgagaacttatgaattaacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||  |||| |||| |||||||| |||||| |||||| ||||||||||||||||||||||    
T  40629423 gtgagaacttatgaattaatataaatgcttattatttgcctaagctatttttcataagctcaaaaataagccaatc 40629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 609 - 690
Target Start/End: Original strand, 33204923 - 33205005
Alignment:
Q  609 tcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||||||||||||||||||||| ||||||||| || ||||||||||| | |||||| |||||| |||||||||||||||    
T  33204923 tcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagatatttttcataagctaaaaaataagccaatc 33205005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 512 - 677
Target Start/End: Complemental strand, 43818971 - 43818806
Alignment:
Q  512 cttatttatgagcttatgcaaataa--gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat-acaattttcgt 608  Q
    |||||||  ||||||||||||||||  |  ||||||||||||| |||||||||| || ||  ||||||||| ||||  |||||||| | ||||||||| |    
T  43818971 cttattttagagcttatgcaaataaatgtctttatgtattatttataagcttgttaatgttatttatgaaaaaacagtttatgaaggttacaattttcat 43818872  T
Q  609 tcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaa 677  Q
    |    ||||||||||||||||||||  ||||| ||| || ||||||||||||| |||||| |||||||||    
T  43818871 t----agtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaa 43818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 531 - 633
Target Start/End: Complemental strand, 48021718 - 48021621
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||| |||| |||||||||||||||||| || ||||||||||||| || |||| ||||||||||||||||| ||    ||||| |||||||||||    
T  48021718 aaataagctcttatttattattcataagcttgttaaagtagtttatgaaa-aataactaatgaagatacaattttcatt----agtgaaaacttatgaat 48021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 991515 - 991659
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| ||||||| |||||| ||||| || | |||||||||||||||| ||| | ||||||||||||| ||||||||    |||||||  |||| |||    
T  991515 aaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacacttttcgtt----agtgagagtttataaat 991609  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  |||||| |||||||| |||||| |||||||||||    
T  991610 taaaataaaagcttatttatttacataagctatttttcataagctcaaaa 991659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 535 - 607
Target Start/End: Complemental strand, 6406939 - 6406867
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg 607  Q
    ||||||||||| |||||||  | ||||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  6406939 aagcttttatgcattattctaaggcttgtcaaggtagtttatgaaaaaacagcttatgaagatgcaattttcg 6406867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 554 - 674
Target Start/End: Original strand, 16012736 - 16012853
Alignment:
Q  554 ataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa-aagcttgttatttg 652  Q
    ||||||||||||| ||||||||||||| |||  ||| |||||||||||||||||||    ||||| ||||||||||||||| ||| ||  || |||||||    
T  16012736 ataagcttgtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgtt----agtgaaaacttatgaattaacctaacaatttttttatttg 16012831  T
Q  653 cataagctgtttttcgtaagct 674  Q
    | |||||| |||||| ||||||    
T  16012832 cttaagctatttttcataagct 16012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 542 - 609
Target Start/End: Complemental strand, 31613725 - 31613658
Alignment:
Q  542 tatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||| |||||||| || |||||||||    
T  31613725 tatgtattattcattagcttgtcaatgtagtttatgaaaaaacaacctatgaagaaaccattttcgtt 31613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 587 - 690
Target Start/End: Complemental strand, 33288090 - 33287990
Alignment:
Q  587 cttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagc 685  Q
    |||||||||||||| ||||||||    ||||| ||||||||||||||| ||||| ||| || ||||| |||||||  ||||| |||||||||||||||||    
T  33288090 cttatgaagatacagttttcgtt----agtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaaaaataagc 33287995  T
Q  686 caatc 690  Q
    |||||    
T  33287994 caatc 33287990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 543 - 609
Target Start/End: Complemental strand, 22319350 - 22319284
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||||| |||| ||  |||||||||||| ||||||||||||| ||||||||||||||    
T  22319350 atgtattattcataagtttgttaacatagtttatgaaacaacaacttatgaatatacaattttcgtt 22319284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 538 - 675
Target Start/End: Complemental strand, 37465951 - 37465816
Alignment:
Q  538 cttttatgtattattcataagcttgtcaaggtagtttat-gaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgt 636  Q
    ||||||| |||||||||||| ||||| ||| |||||||| |||| |||||||||| |||||||||| || |||     | |||||||||||||||||  |    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgtt----ggcgagaacttatgaattaatat 37465856  T
Q  637 aaaagctt-gttatttgcataagctgtttttcgtaagctc 675  Q
    ||||||||  |||||||||||||||  ||||| |||||||    
T  37465855 aaaagcttatttatttgcataagctaattttcataagctc 37465816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 17944686 - 17944738
Alignment:
Q  549 tattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaa 601  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaa 17944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 644
Target Start/End: Complemental strand, 23356562 - 23356453
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||  ||| ||||||||||| ||| ||||||||||| ||||||||| ||||  ||||||| |||| ||||| |||    ||||||||| |||||||    
T  23356562 aaataaggctttttgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgtt----agtgagaacctatgaat 23356467  T
Q  631 taacgtaaaagctt 644  Q
    |||| |||||||||    
T  23356466 taacataaaagctt 23356453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 539 - 598
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||  |||||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 539 - 678
Target Start/End: Complemental strand, 16932992 - 16932857
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    ||| | | ||||| ||||||  |||    
T  16932992 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgtt----agtaaaagcttataaattaaaataa 16932898  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    ||||||  |||| | |||||||| |||||| ||||||||||    
T  16932897 aagcttatttatatacataagctatttttcataagctcaaa 16932857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 539 - 678
Target Start/End: Complemental strand, 16938375 - 16938240
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    ||| | | ||||| ||||||  |||    
T  16938375 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgtt----agtaaaagcttataaattaaaataa 16938281  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    ||||||  |||| | |||||||| |||||| ||||||||||    
T  16938280 aagcttatttatatacataagctatttttcataagctcaaa 16938240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 614
Target Start/End: Complemental strand, 23119991 - 23119908
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    |||||| |||| | |||||||||||||| ||||||| |||||||| |||| ||||  || ||||||||||||||| ||||||||    
T  23119991 aaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaatttttgttcgtga 23119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 540 - 579
Target Start/End: Complemental strand, 40629479 - 40629440
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40629479 tttatgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 22575609 - 22575679
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| |||| ||| || ||||||||| ||||  ||||||||||||||||||||||    
T  22575609 ttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaattttcgtt 22575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 539 - 641
Target Start/End: Original strand, 41677397 - 41677496
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaa-caacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgta 637  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| || ||  |||||||||||||||||| |||     |||||||||| ||||||||| ||    
T  41677397 ttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtt----tgtgagaacttgtgaattaactta 41677492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 497 - 606
Target Start/End: Complemental strand, 1054177 - 1054063
Alignment:
Q  497 gtccgtttgtattgacttatttatgagcttatgcaa----ataagcttttatgtattattcataagcttgtcaaggtagtttat-gaaagaacaacttat 591  Q
    ||||||||||||| ||||| || |||||||||||||    |||||||||||||||||||||| ||   | |||| |||||||||  ||| |||| ||||     
T  1054177 gtccgtttgtattcacttagttttgagcttatgcaaataaataagcttttatgtattattcaaaaaaatttcaatgtagtttataaaaaaaacagcttag 1054078  T
Q  592 gaagatacaattttc 606  Q
    |||||||||||||||    
T  1054077 gaagatacaattttc 1054063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 43391751 - 43391819
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    ||||||||||||| |||| |||||||||||||||| || || ||||||||||| |||||| ||| ||||    
T  43391751 tattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttgtga 43391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 540 - 615
Target Start/End: Original strand, 14593172 - 14593250
Alignment:
Q  540 tttatgtattattcata--agcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||||  |||||||||| |||||||||| ||| |||  ||| ||||||||||||||||||| |||||    
T  14593172 tttatgtattattcatataagcttgtcaaagtagtttatgaaaaaaactgcttgtgaagatacaattttcgttagtgag 14593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 539 - 678
Target Start/End: Original strand, 16958839 - 16958974
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||| ||||| || | |||||||||||||||| |||   ||||||||||||||||||||||    ||| | | ||||| ||||||  |||    
T  16958839 ttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgtt----agtaaaagcttataaattaaaataa 16958933  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    ||||||  |||| | |||||||| |||||| ||||||||||    
T  16958934 aagcttatttatatacataagctatttttcataagctcaaa 16958974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 530 - 605
Target Start/End: Complemental strand, 21027585 - 21027510
Alignment:
Q  530 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||||| |||||||||||||| ||||| || | ||||| |||||||||| ||||  || |||||||||||||||    
T  21027585 caaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaatttt 21027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 539 - 598
Target Start/End: Complemental strand, 28759903 - 28759844
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    |||||| |||||||||||||||||| |||||||||||| ||| || ||||||| ||||||    
T  28759903 ttttatttattattcataagcttgttaaggtagtttataaaaaaataacttataaagata 28759844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 507 - 567
Target Start/End: Complemental strand, 33288198 - 33288134
Alignment:
Q  507 attgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaag 567  Q
    |||||| ||||| |||||||||||||||||    ||||||||||||||||||| |||||||||||    
T  33288198 attgacatatttttgagcttatgcaaataaataagcttttatgtattattcattagcttgtcaag 33288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 551 - 615
Target Start/End: Complemental strand, 37779335 - 37779269
Alignment:
Q  551 ttcataagcttgtcaaggtagtttatg--aaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||||||||||||||  ||| |||| |||||||| |||||| ||||||| |||||    
T  37779335 ttcataagcttgtcaaggtagtttatgaaaaaaaacagcttatgaaaatacaactttcgttagtgag 37779269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 41037768 - 41037814
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 578  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  41037768 aaataagcttttatgtattattca-aagcttgtcaaggtaatttatga 41037814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 14676021 - 14675956
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    ||||||||||||| ||||| || | |||||||||||||||| ||||  |||||||||||||||||||    
T  14676021 tttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttc 14675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 690
Target Start/End: Original strand, 25908366 - 25908465
Alignment:
Q  588 ttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagcc 686  Q
    |||||||||||||||||||||| ||||     || |||| ||||||| ||||| ||| || ||||||||||||  |||||| ||| ||||||||||||||    
T  25908366 ttatgaagatacaattttcgtttgtgaa----aagttataaattaacataaaaacttatttatttgcataagccatttttcataacctcaaaaataagcc 25908461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 7098171 - 7098122
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||| ||||||| |||||||||||| |||||||| ||||||||||||    
T  7098171 aaataagattttatgaattattcataagtttgtcaagatagtttatgaaa 7098122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 618 - 685
Target Start/End: Original strand, 1401171 - 1401239
Alignment:
Q  618 agaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagc 685  Q
    ||||||||||||||||| |||||||||  |||||||||| | || |||||| ||||||||||| |||||    
T  1401171 agaacttatgaattaacataaaagcttatttatttgcatgaactatttttcataagctcaaaagtaagc 1401239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 18837238 - 18837194
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  18837238 ttatttgcatatgctgttttgcataagctcaaaaataagccaatc 18837194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 543 - 615
Target Start/End: Complemental strand, 19308550 - 19308478
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||||| |||| | |||||||||||||| |  | ||||||||||| ||||||| ||| |||||    
T  19308550 atgtattattcataagtttgttagggtagtttatgaaaaattagcttatgaagatccaatttttgttagtgag 19308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 530 - 674
Target Start/End: Complemental strand, 23137234 - 23137094
Alignment:
Q  530 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||  |||||||||||||| ||||| || | ||||||||||||| || ||    ||||||||||||||||||| ||    ||||||| ||||| ||    
T  23137234 caaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaattttcatt----agtgagagcttataaa 23137140  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagct 674  Q
    ||||  |||||||||  |||||| |||||||| |||||| ||||||    
T  23137139 ttaaaataaaagcttacttatttacataagctatttttcataagct 23137094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 24414538 - 24414614
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat-gaaagaacaacttatgaagatacaattttc 606  Q
    |||||| | |||||||||||| ||||||||||||||| ||| ||||  ||| ||||||||||| || ||||||||||    
T  24414538 aaataaacatttatgtattatccataagcttgtcaagatagcttataaaaaaaacaacttatggagttacaattttc 24414614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 678
Target Start/End: Original strand, 35246687 - 35246828
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| | ||| || | |||||||||||||||| |||   |||||| |||||||||||||||    ||||||  ||||| |||    
T  35246687 aaataagtttttatgtattatttaaaagttttt-aaggtagtttatgaaaaaact--ttatgaggatacaattttcgtt----agtgagggcttataaat 35246779  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||  |||||||||  |||||| |||| ||| |||||| ||||||||||    
T  35246780 taaaataaaagcttatttatttacataggctatttttcataagctcaaa 35246828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 38372574 - 38372530
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  38372574 ttatttgcataagctgttttgcataagctcaaaaataagtcaatc 38372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Original strand, 40629486 - 40629530
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||    
T  40629486 ttatttggataagctgttttgcataagctcaaaaataagccaatc 40629530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 615
Target Start/End: Complemental strand, 7774800 - 7774734
Alignment:
Q  548 ttattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||| ||||| ||||||| ||| ||||||||| ||||  |||||||||||||||||||||| |||||    
T  7774800 ttatttataagtttgtcaacgtactttatgaaaaaacat-ttatgaagatacaattttcgttggtgag 7774734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 689
Target Start/End: Original strand, 26331868 - 26331935
Alignment:
Q  623 ttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||||||||||| ||||||||| || ||||||||||||| |||||| |||| |||  |||||||||||    
T  26331868 ttatgaattaacataaaagcttatttatttgcataagctatttttcataagttcattaataagccaat 26331935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 48895311 - 48895358
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatga 578  Q
    |||||||| || || |||||||||||||||| ||||||||||||||||    
T  48895311 aaataagcattcatatattattcataagcttatcaaggtagtttatga 48895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 531 - 608
Target Start/End: Original strand, 28004599 - 28004675
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgt 608  Q
    ||||||| |||||||||||||| ||||  || | ||| |||||||||||| ||| | |||||||||||||| ||||||    
T  28004599 aaataagtttttatgtattatttataatttttttaag-tagtttatgaaaaaaccatttatgaagatacaaatttcgt 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 539 - 580
Target Start/End: Complemental strand, 49104444 - 49104403
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||||||||||||| || ||||||| ||||||||||    
T  49104444 ttttatgtattattcataagtttatcaaggtggtttatgaaa 49104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 4e-44; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 531 - 694
Target Start/End: Original strand, 32975702 - 32975862
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||     ||||||||||||||||    
T  32975702 aaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtt----tgtgagaacttatgaat 32975797  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaa 694  Q
    |||  |||||||||  ||||||||||||||| |||||| |||||||||||| ||| |||||||||    
T  32975798 taatataaaagcttatttatttgcataagctatttttcataagctcaaaaacaagacaatctaaa 32975862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 501 - 689
Target Start/End: Complemental strand, 34286668 - 34286480
Alignment:
Q  501 gtttgtattgacttatttatgagcttatg----caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||||||||||| ||||||||||     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  34286668 gtttggattgacttatttttgagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaa-aacagcttatgaaga 34286570  T
Q  597 tacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||||||||||||    || |||||||||||||||||  |||||||||  |||||||||||| || |||||| |||||||||||||||| ||||    
T  34286569 tacaattttcgtt----agggagaacttatgaattaatataaaagcttatttatttgcataacctatttttcataagctcaaaaataagtcaat 34286480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 690
Target Start/End: Original strand, 28879037 - 28879226
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||| ||||||| |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28879037 ccgtttgaattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaa 28879136  T
Q  595 gatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |     ||||| ||| ||||   ||||||||||||||||| |||||||||  ||||||||||||||| |||||| |||||| ||||||||| |||||    
T  28879137 g-----atttttgttagtga--aagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatc 28879226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 538 - 690
Target Start/End: Complemental strand, 10298990 - 10298842
Alignment:
Q  538 cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgta 637  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||    | ||||||||||||||||||| ||    
T  10298990 cttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgtt----aatgagaacttatgaattaacata 10298895  T
Q  638 aaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||   |||||||||||||| || ||| ||||||||||||||||||||||    
T  10298894 aaagctatctatttgcataagctattattcataagctcaaaaataagccaatc 10298842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 682
Target Start/End: Original strand, 32131455 - 32131603
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||  |||||| ||||||||||||||||||  |    |||||||||||||||||    
T  32131455 aaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagatacaattttcaat----agtgagaacttatgaat 32131550  T
Q  631 taacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaata 682  Q
    |||| ||||||||| | ||||||||||| || |||||| ||||||||||||||    
T  32131551 taacataaaagcttatctatttgcataaactatttttcataagctcaaaaata 32131603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 530 - 643
Target Start/End: Complemental strand, 35168513 - 35168401
Alignment:
Q  530 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||  || ||  ||||||||||||    
T  35168513 caaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgtcagttag-aagaacttatgaa 35168415  T
Q  630 ttaacgtaaaagct 643  Q
    ||||| ||||||||    
T  35168414 ttaacttaaaagct 35168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 534 - 684
Target Start/End: Complemental strand, 24350587 - 24350440
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||| || | |||||||||||| ||||||||||    ||| ||||||||||||||||    
T  24350587 taagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgtt----agtaagaacttatgaattaa 24350492  T
Q  634 cgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    | ||||| |||  |||||||||||||||  ||||| ||||||||||||||||    
T  24350491 cataaaatcttatttatttgcataagctagttttcataagctcaaaaataag 24350440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 495 - 674
Target Start/End: Complemental strand, 9131241 - 9131059
Alignment:
Q  495 gggtccgtttgtattgactta--tttatgagcttatgcaaata----agcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaact 588  Q
    ||||||||||| ||||||||   ||| ||||||||||||||||    ||||||||||||||||| ||||||||||| |  |||||| ||||  |||| ||    
T  9131241 gggtccgtttgaattgactttattttttgagcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagct 9131142  T
Q  589 tatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagct 674  Q
    |||||||||||||||||||||    |||  |||||||||||||||| |||||| || || ||||||||||||| |||||| ||||||    
T  9131141 tatgaagatacaattttcgtt----agtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 16972428 - 16972271
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||| |||||| |||| |||||||||||||||||||||||    ||||| ||||||||||    
T  16972428 aaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgtt----agtgataacttatgaa 16972333  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    | ||  |||||| ||  ||||||||||||||| ||||   ||||||||||| |||| |||||    
T  16972332 tcaatataaaagtttatttatttgcataagctattttgaataagctcaaaattaagtcaatc 16972271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 2669663 - 2669806
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||| | |||||||||| ||||| |||| |||||||||||||||| ||||||||||||| ||||| ||||| ||    |||  || |||||||||    
T  2669663 aaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcatt----agtaggatcttatgaat 2669758  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||| |||||||||  |||||| |||||||| |||||| |||||||||    
T  2669759 taacataaaagcttatttattttcataagctctttttcataagctcaa 2669806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 557 - 667
Target Start/End: Complemental strand, 25465891 - 25465785
Alignment:
Q  557 agcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcat 655  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| |||    | ||| ||||||||||||||| |||||||||  ||||||||||    
T  25465891 agcttgtcaaggaagtttatgaaa-aacaacttatgaagatacaatttttgtt----actgaaaacttatgaattaacataaaagcttatttatttgcat 25465797  T
Q  656 aagctgtttttc 667  Q
    ||||| ||||||    
T  25465796 aagctatttttc 25465785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 507 - 690
Target Start/End: Complemental strand, 32213121 - 32212930
Alignment:
Q  507 attgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaac------ttatgaag 595  Q
    |||||||||||| | |||||||||||||||    ||||||||||||||||||||||||||||| | ||||||||| ||| |||| |       || ||||    
T  32213121 attgacttatttttaagcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaataacagcataagaataagaag 32213022  T
Q  596 atacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    | ||||||||| ||    ||||||||||||| || |||| |||||||||  ||||||||||||||| |||||| |||||  |||||||||||||||    
T  32213021 acacaattttcatt----agtgagaacttataaaataacataaaagcttatttatttgcataagctatttttcataagcaaaaaaataagccaatc 32212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 543 - 677
Target Start/End: Original strand, 9782210 - 9782340
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| |||||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||    ||| ||| ||||||||||||| |||||      
T  9782210 atgtattatttataagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgtt----agtaagatcttatgaattaacataaaaag 9782305  T
Q  643 ttgttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||  | ||||||| |||| |||||| |||||||||    
T  9782306 ttaatttttgcatcagctctttttcataagctcaa 9782340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 19925459 - 19925314
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||| || |||||||||| |||| ||||| ||||||||| |||||| ||||||||||||| ||||||||||||||    ||| |||  ||||||||    
T  19925459 aaataagcattaatgtattatttataaacttgttaaggtagtt-atgaaataacaacttatgaatatacaattttcgtt----agtaagatattatgaat 19925365  T
Q  631 taacgtaaaagctt-gttatttgcataagct-gtttttcgtaagctcaaaa 679  Q
    |||| |||||||||  ||||||| |||||||  |||||| |||||||||||    
T  19925364 taacataaaagcttaattatttgtataagctcttttttcataagctcaaaa 19925314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 542 - 679
Target Start/End: Complemental strand, 24867011 - 24866877
Alignment:
Q  542 tatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaag 641  Q
    ||||||||||| ||||| |||| || ||||||||||||| |||| ||||||||| |||||||||||||    |  |||||||||| ||||||  |||||     
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtt----atcgagaacttataaattaagataaaaa 24866916  T
Q  642 ctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||||||||||||| |||||| |||||||||||    
T  24866915 cttatttatttgcataagctctttttcataagctcaaaa 24866877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 582 - 690
Target Start/End: Original strand, 10213761 - 10213866
Alignment:
Q  582 aacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaa 680  Q
    |||| |||||||||| |||||||| |||    ||||||||||||||||||||| || |||||| || ||||||||||||| |||||| ||||||||||||    
T  10213761 aacagcttatgaagaaacaatttttgtt----agtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaaaaa 10213856  T
Q  681 taagccaatc 690  Q
    ||| ||||||    
T  10213857 taatccaatc 10213866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 675
Target Start/End: Original strand, 14942439 - 14942580
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||| ||||||||| |||||||||| ||| |||||||||||| ||| |||||||||||| ||||||| |||    ||  ||||||||| |||    
T  14942439 aaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaatttttgtt----agcaagaacttataaat 14942534  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctc 675  Q
    |||| ||||| |||  ||||||||| ||||| |||| | |||||||    
T  14942535 taacataaaaccttatttatttgcaaaagctattttccataagctc 14942580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 35285943 - 35286069
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||| ||| ||||||||||||| ||||| ||||||||||||| ||   ||||||||||||||||||   || || || ||||||||||||||    
T  35285943 aaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaattt---ttagt-agcgagaacttatgaat 35286038  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||||| |||||||  ||||||| |||||||    
T  35286039 taacgtgaaagcttatttatttgtataagct 35286069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 38895674 - 38895819
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||| || || ||||||||||||||| || |||    ||||| ||||||| |||    
T  38895674 aaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgtt----agtgaaaacttataaat 38895769  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  ||||||| |||| ||  ||||| |||||||||||    
T  38895770 taatataaaaacttatttatttgtataaactaattttcataagctcaaaa 38895819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 594
Target Start/End: Original strand, 35453425 - 35453488
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||    
T  35453425 aaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 8752821 - 8752972
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||| |||||||||| || |  |||||| ||| ||||||||| |||| |||| |||||||||| ||| |||     ||||||||||||||||    
T  8752821 aaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtt----tgtgagaacttatgaat 8752916  T
Q  631 taacgtaaaagctt-gttatttgca-taagctgtttttcgtaagctcaaaaataag 684  Q
    |||| |||||||||  |||||| || |||| | |||||| ||||||||||||||||    
T  8752917 taacataaaagcttatttatttacattaagttatttttcataagctcaaaaataag 8752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 543 - 673
Target Start/End: Original strand, 30974016 - 30974143
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| ||||  |||| |||| ||||||||||| |||||||||||||  |||||||||||||    ||| ||| ||||||||||| | |||||||    
T  30974016 atgtattatttataaatttgttaaggcagtttatgaaaaaacaacttatgaatttacaattttcgtt----agtaagatcttatgaattagcataaaagc 30974111  T
Q  643 tt-gttatttgcataagctgtttttcgtaagc 673  Q
    ||  ||||||||||||||| |||||| |||||    
T  30974112 ttatttatttgcataagctctttttcataagc 30974143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 557 - 614
Target Start/End: Complemental strand, 25333776 - 25333720
Alignment:
Q  557 agcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  25333776 agcttgtcaaggtagtttatgaaa-aacaacttatgaagatacaattttcgttagtga 25333720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 498 - 679
Target Start/End: Complemental strand, 41145506 - 41145322
Alignment:
Q  498 tccgtttgtattgacttatttatgagcttatgcaa----ataagcttttat---gtattattcataagcttgtcaaggtagtttatgaaagaacaactta 590  Q
    |||||||| |||||| |  || |||||||||||||    ||||||||||||    ||||||||||||| |||| |||||||||||||||| ||||||||     
T  41145506 tccgtttggattgacatcattttgagcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaactt- 41145408  T
Q  591 tgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    | ||||||| |||||| ||    ||||||||||||||||||||  || || |||  |||||||||||| || |||||| |||||||||||    
T  41145407 taaagatacgattttcatt----agtgagaacttatgaattaatatataaacttatttatttgcataaactatttttcataagctcaaaa 41145322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 12607095 - 12607239
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| |||   ||||||||||||||||| ||||    ||||||| ||||| |||    
T  12607095 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacggtttatgaagatacaatttccgtt----agtgagagcttataaat 12607189  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  |||||| |||||||| |||||| |||||| ||||    
T  12607190 taaaataaaagcttatttatttacataagctatttttcataagcttaaaa 12607239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 615
Target Start/End: Original strand, 19925572 - 19925656
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||  ||||||| ||||| |||| |||||| |||| |||| ||||| |||||||||||||||||||||| |||||    
T  19925572 aaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattttcgttagtgag 19925656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 13131445 - 13131614
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtca---------aggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaa 621  Q
    |||||||||||||||||||||||||||| ||||||         ||||||||||||||| |||| |||||||| |||||||||| |||     |||||||    
T  13131445 aaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtagtttatgaaaaaacagcttatgaaaatacaatttttgtt----tgtgagaa 13131540  T
Q  622 cttatg----aattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||    | ||||| |||||||||  ||||||||||| ||| |||||| |||||| ||||||||| |||||    
T  13131541 cttatgagtcagttaacataaaagcttatttatttgcatatgctatttttcataagcttaaaaataagtcaatc 13131614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 32924283 - 32924139
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||| | ||||| ||||||||||  | ||||||||||||| ||||||||||||||||| |||||||     | ||||| |||||||||||    
T  32924283 aaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaaattttc-----ttagtgaaaacttatgaat 32924189  T
Q  631 taacgtaaaagcttgt---tatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  ||||||||| |   | |||||||||||| || ||| |||||||||    
T  32924188 taatataaaagcttatttatttttgcataagctattcttcataagctcaa 32924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 543 - 677
Target Start/End: Original strand, 2563385 - 2563516
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| ||||| |||| || ||||||||||||| |||||||| |||| ||||||||||  ||    ||| ||| ||||||||||||| |||||||    
T  2563385 atgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttatt----agtaagatcttatgaattaacataaaagc 2563480  T
Q  643 -ttgttatttgcataagctgtttttcgtaagctcaa 677  Q
     |  ||||||| ||||||| |||||| |||||||||    
T  2563481 ataattatttgtataagctctttttcataagctcaa 2563516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 512 - 679
Target Start/End: Original strand, 28280701 - 28280869
Alignment:
Q  512 cttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcg 607  Q
    |||||||  ||||||||||||||||    || ||||||||||||| ||||| |||| || ||||||||||||| |||   |||||||| || |  ||| |    
T  28280701 cttattttagagcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttg 28280800  T
Q  608 ttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||    ||||||||||||||||||||  ||||| ||| || ||||||||||||| |||||| |||||||||||    
T  28280801 tt----agtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaaaa 28280869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 11988212 - 11988356
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | ||||||||| |||||| |||   ||||||||||||||||||||||    ||||||| ||||| |||    
T  11988212 aaataagtttttatgtattatttataagttttt-aaggtagttcatgaaaaaaccgtttatgaagatacaattttcgtt----agtgagagcttataaat 11988306  T
Q  631 taacgtaaaagc-ttgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||||| |  |||||| |||||| | |||||| |||||||||||    
T  11988307 taaaataaaagcatatttatttacataagttatttttcataagctcaaaa 11988356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 579
Target Start/End: Original strand, 13265499 - 13265547
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 579  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13265499 aaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 543 - 679
Target Start/End: Original strand, 14262353 - 14262486
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||| ||||| ||||  |||| |||||||||||||||| ||||||||||||| |||||||||| |||    ||| ||| ||||||||||||| ||||| |    
T  14262353 atgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtt----agtaagatcttatgaattaacataaaaac 14262448  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||  || |||||||||| | |||||  |||||||||||    
T  14262449 ttatttttttgcataagttcttttttataagctcaaaa 14262486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 539 - 679
Target Start/End: Complemental strand, 16706163 - 16706026
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    |||||||||||||||||||| |||  || ||||||||||||| |||||| || ||| |||||| |||| ||    |  ||||| |||| ||||||| |||    
T  16706163 ttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaacatacgaatatacaactttcatt----aacgagaatttataaattaacataa 16706068  T
Q  639 aagc-ttgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||| |  |||||||||||||||||||| | |||||||||||    
T  16706067 aagcgtatttatttgcataagctgttttgcataagctcaaaa 16706026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 560 - 660
Target Start/End: Complemental strand, 36907686 - 36907589
Alignment:
Q  560 ttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataag 658  Q
    |||| |||||||||||||||| |||||||| |||| ||||||||||||||    ||| ||| ||||||||||| | |||||||||  |||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgtt----agtaagatcttatgaattagcataaaagcttatttatttgcataag 36907591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 37410983 - 37410839
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| ||||  | ||||||||||||||||||||    ||| ||||||||| |||    
T  37410983 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgtt----agtaagaacttataaat 37410889  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  || || |||  |||||| |||||||| |||||| |||||||||||    
T  37410888 taaaatataaacttatttatttacataagctatttttcataagctcaaaa 37410839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 42102122 - 42102266
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| |||   | ||||||||||||||||||||    | |||||  |||| |||    
T  42102122 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgttaatgaagatacaattttcgtt----aatgagaggttataaat 42102216  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||||||| || |||| |||||||| |||||| |||||||||||    
T  42102217 taaaataaaagcttatttatttacataagctatttttcataagctcaaaa 42102266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 8216967 - 8216896
Alignment:
Q  539 ttttatgtattattcataagcttgtc-aaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |  |  ||||||||||||||||||||||    
T  8216967 ttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatacaattttcgtt 8216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 546 - 679
Target Start/End: Original strand, 9788839 - 9788969
Alignment:
Q  546 tattattcataagcttgtcaa-ggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgt-aaaagct 643  Q
    |||||||||||| |||||||| ||||||||||||||  | |||||||||||||||| ||||     || ||||||||||||||||||||  | ||||  |    
T  9788839 tattattcataatcttgtcaaaggtagtttatgaaaataaaacttatgaagatacattttt-----gttagtgagaacttatgaattaatttaaaaatat 9788933  T
Q  644 tgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
      |||||| |||||||| |||||| |||||||||||    
T  9788934 atttattttcataagctatttttcataagctcaaaa 9788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 614
Target Start/End: Complemental strand, 14709607 - 14709525
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    ||||||||||||| |||  |||||||||||||||||| |||||||||||| |||| || ||||| |||||||||| ||| ||||    
T  14709607 aaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaacagctcatgaa-atacaattttagttagtga 14709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 679
Target Start/End: Original strand, 35055468 - 35055581
Alignment:
Q  565 aaggtagtttatgaaagaacaac---ttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagct 660  Q
    |||||||||||||||| || |||   ||||||||||||||||||||||    ||||||| ||||||||||||  |||||||||  |||||| ||||||||    
T  35055468 aaggtagtttatgaaaaaaaaaccatttatgaagatacaattttcgtt----agtgagagcttatgaattaa-ataaaagcttatttatttacataagct 35055562  T
Q  661 gtttttcgtaagctcaaaa 679  Q
     |||||| |||||||||||    
T  35055563 atttttcataagctcaaaa 35055581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 666
Target Start/End: Complemental strand, 42363387 - 42363256
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| |||   |||||||||||||||||| |||    ||||||||||| | |||    
T  42363387 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaatttttgtt----agtgagaacttttaaat 42363293  T
Q  631 taacgtaaaagctt-gttatttgcataagctgttttt 666  Q
    |||  |||||||||  |||||| |||||||| |||||    
T  42363292 taaaataaaagcttatttatttacataagctattttt 42363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 535 - 690
Target Start/End: Original strand, 24087189 - 24087342
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaac--ttatgaagatacaattttcgttcgtgagtgagaacttatgaatta 632  Q
    |||||||||| ||||||||||||||||||| || |||||||||||| || |||  ||| | |||||| |||||||||    | ||| ||||||| |||||    
T  24087189 aagcttttatatattattcataagcttgtcgagatagtttatgaaa-aaaaacgtttacggagataccattttcgtt----aatgaaaacttataaatta 24087283  T
Q  633 acgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |  |||||||||  ||||||||||||||| |||||| |   |||||||||||| |||||    
T  24087284 aaataaaagcttatttatttgcataagctatttttcattcactcaaaaataagtcaatc 24087342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 585 - 667
Target Start/End: Complemental strand, 25333718 - 25333639
Alignment:
Q  585 aacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttc 667  Q
    |||||||||||||||||||||||||    ||||| ||||||||||||||| |||||||||  |||||| |||||||| ||||||    
T  25333718 aacttatgaagatacaattttcgtt----agtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttc 25333639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 32131456 - 32131403
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    |||||||||||||||||||| | |||||||||||||||| ||||| ||||||||    
T  32131456 ttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaatgggt 32131403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 218315 - 218247
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    
T  218315 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aactatttatgaagatacaattttcgtt 218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 694875 - 694807
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    
T  694875 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aactatttatgaagatacaattttcgtt 694807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 699084 - 699016
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    
T  699084 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aactatttatgaagatacaattttcgtt 699016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 731938 - 731870
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    
T  731938 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aactatttatgaagatacaattttcgtt 731870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 855834 - 855766
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||| || | |||||||||||||||| ||| | ||||||||||||||||||||||    
T  855834 ttttatgtattatttataagttttt-aaggtagtttatgaaa-aactatttatgaagatacaattttcgtt 855766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 546 - 660
Target Start/End: Complemental strand, 9131073 - 9130962
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt- 644  Q
    |||| |||||||||||||| |  | |||| ||||  |||||| |||||||||||||||||||||    |||  |||||||||||||||| |||||| ||     
T  9131073 tatttttcataagcttgtcgatttggtttctgaagaaacaacctatgaagatacaattttcgtt----agtcggaacttatgaattaacataaaagttta 9130978  T
Q  645 gttatttgcataagct 660  Q
     |||||||||||||||    
T  9130977 tttatttgcataagct 9130962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 19327882 - 19327955
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||| || ||||  |||| |||||||||||||    
T  19327882 aaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatttt 19327955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 1089028 - 1089077
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||    
T  1089028 aaataagttttaatgtattattcataagcttgtcaatgtactttatgaaa 1089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 658
Target Start/End: Complemental strand, 14725048 - 14724912
Alignment:
Q  522 agcttatgcaaataag---cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtga 618  Q
    |||||||||||||||    ||||||| ||||||| ||||| |||| || ||| ||||||||| ||||||||||| || || ||||||||||    | | |    
T  14725048 agcttatgcaaataaagatcttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgtt----aataa 14724953  T
Q  619 gaacttatgaattaacgtaaaagctt-gttatttgcataag 658  Q
    |||||||||||||||  ||||| |||  |||||||||||||    
T  14724952 gaacttatgaattaagataaaaacttatttatttgcataag 14724912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 597
Target Start/End: Original strand, 23412758 - 23412815
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||| |||| |||||    
T  23412758 tttatgtattattcataaacttgtcaatatagtttatgaaaaaacaatttataaagat 23412815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 38338921 - 38338778
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||  ||||||| ||||| || | |||||||||||||||| || |  |||||||||||  |||||||||    ||||||||||||| |||    
T  38338921 aaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatatgattttcgtt----agtgagaacttataaat 38338827  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||  ||||| |||  |||||| |||||||| |||||| ||| ||||||    
T  38338826 taaaataaaaacttatttatttacataagctatttttcataatctcaaa 38338778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 606
Target Start/End: Complemental strand, 45548216 - 45548141
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    ||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  |||||||| ||||||| |||||||    
T  45548216 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaaatacaacttaggaagataaaattttc 45548141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 589
Target Start/End: Complemental strand, 2289957 - 2289899
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaactt 589  Q
    ||||||| |||||| |||||| ||||||||||| ||| ||||||| |||| ||||||||    
T  2289957 aaataagtttttatttattatccataagcttgttaagatagtttaagaaaaaacaactt 2289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 34102757 - 34102683
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||||||||||||||||||||| || || | || ||||||||||||| | ||| | || || ||||||||||    
T  34102757 aaataagcttttatgtattattcatgagtttttaaatgtagtttatgaaaaatcaattaataaaaatacaatttt 34102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 43577248 - 43577314
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||| ||||  |||| |||||||||||| ||| |||||||||| || ||| ||||||||||    
T  43577248 atgtattatttataaatttgttaaggtagtttataaaaaaacaacttataaatataaaattttcgtt 43577314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 26047024 - 26046959
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatac 599  Q
    ||||||||||| ||||||| | ||||||||  ||||||||||||||| ||| |  |||||||||||    
T  26047024 taagcttttatttattattaacaagcttgttgaggtagtttatgaaaaaactaaatatgaagatac 26046959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 531 - 687
Target Start/End: Original strand, 4026941 - 4027093
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||    |||||||||||||||||    
T  4026941 aaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgtt----agtgagaacttatgaat 4027035  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcca 687  Q
    |||| ||| |||||  ||||||||||||||| |||||| |||||| ||||||||||||    
T  4027036 taacataatagcttatttatttgcataagctatttttcataagcttaaaaataagcca 4027093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 534 - 690
Target Start/End: Complemental strand, 36501583 - 36501430
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||    |||||||||| |||||||||    
T  36501583 taagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgtt----agtgagaactcatgaattaa 36501488  T
Q  634 cgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    | |||||||||  ||||||||||||||| ||||||  |||||||||||||||||||||    
T  36501487 cataaaagcttatttatttgcataagctatttttcacaagctcaaaaataagccaatc 36501430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 522 - 690
Target Start/End: Original strand, 38216025 - 38216190
Alignment:
Q  522 agcttatgcaaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaa 621  Q
    |||||||||||||||    ||||||||||||||||||||||||||||||||||| |||| || | | |||||||||||||||||||||    ||||||||    
T  38216025 agcttatgcaaataaataattatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattttcgtt----agtgagaa 38216120  T
Q  622 cttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||| |||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||    
T  38216121 cttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagctaaaaaataagccaatc 38216190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 531 - 698
Target Start/End: Complemental strand, 33321383 - 33321219
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||    ||||||| ||| |||||    
T  33321383 aaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgtt----agtgagagcttgtgaat 33321288  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    |||| |||| | ||  ||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  33321287 taacataaaggtttatttatttgcataagctattttacataagctcaaaaataagccaatccaaatggg 33321219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 513 - 690
Target Start/End: Original strand, 887405 - 887583
Alignment:
Q  513 ttatttatgagcttatgcaaat----aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgt 608  Q
    |||||| |||||||||||||||    |||||||| |||||||||||||||||||||||||||||||||| || | |  |||||||||||||||||||| |    
T  887405 ttatttctgagcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcat 887504  T
Q  609 tcgtgagtgagaacttatgaattaacgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |    ||  ||||||||||||||||| ||||||||| | |||||||||||||||||||||  ||||| |||||| ||||||||    
T  887505 t----agcaagaacttatgaattaacataaaagcttatctatttgcataagctgtttttcaaaagctaaaaaattagccaatc 887583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 544 - 690
Target Start/End: Original strand, 5903561 - 5903709
Alignment:
Q  544 tgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag-tgagaacttatgaattaacgtaaaagc 642  Q
    ||||||| ||||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||| ||||| |||||||||| |||| ||| |||||||    
T  5903561 tgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaatttttgttagtgagatgagaacttaagaataaacataaaagc 5903660  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||  ||||||||||||||| |||||| | ||||||||||||||||||||    
T  5903661 ttatttatttgcataagctatttttcatgagctcaaaaataagccaatc 5903709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 531 - 699
Target Start/End: Original strand, 29774760 - 29774925
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||| ||||||||| || |||| |||||||||||||||| |||  |||||||| ||||||||||||||    |||||||||||||||||    
T  29774760 aaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgtt----agtgagaacttatgaat 29774855  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    ||||||||||||||  |||||||| ||| || |||||||| |||||||||||||| ||||| ||| ||||    
T  29774856 taacgtaaaagcttatttatttgcttaaactatttttcgttagctcaaaaataagtcaatccaaacgggt 29774925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 21788472 - 21788615
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||    ||||||| |||||||||    
T  21788472 aaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgtt----agtgagagcttatgaat 21788567  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  |||||||||  ||||||||||||| | |||||| |||||||||    
T  21788568 taatataaaagcttatttatttgcataagttatttttcataagctcaa 21788615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 25836783 - 25836634
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||| |||||    ||||||||||||||||     
T  25836783 aaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgtt----agtgagaacttatgaa- 25836689  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    |||| |||||||||  ||||||||||||| | || ||| ||||||||||||||||    
T  25836688 taacataaaagcttatttatttgcataaggtattcttcataagctcaaaaataag 25836634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 8832469 - 8832628
Alignment:
Q  531 aaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatg 627  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||||||||  |||  |||  |||||||||||||||||    ||||| ||||||||    
T  8832469 aaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattttcgtt----agtgaaaacttatg 8832564  T
Q  628 aattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||| ||||||||| || ||||||||||||| |||||| |||||| ||||||||| |||||    
T  8832565 aattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatc 8832628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 685
Target Start/End: Original strand, 4004834 - 4004985
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||| ||||||||||||| | || |||||||||||||  ||||||||||||| |||||||||||||    |||||||||||||||||    
T  4004834 aaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgtt----agtgagaacttatgaat 4004929  T
Q  631 taacgtaaaagc-ttgttatttgcataagctgtttttcgtaagctcaaaaataagc 685  Q
    ||   ||||||| || |||| |||||||||| |||||| ||| |||||||||||||    
T  4004930 tactataaaagcttttttatctgcataagctatttttcataaactcaaaaataagc 4004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 533 - 690
Target Start/End: Complemental strand, 13056396 - 13056242
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatta 632  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| || | ||||||||||| |||||||||||    |  ||||||||||||||||    
T  13056396 ataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgtt----aacgagaacttatgaatta 13056301  T
Q  633 acgtaaaagcttgt-tatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || | ||||||| | |||||| |||| || |||||  ||||||||| ||||||||||||    
T  13056300 acattaaagcttatctatttgtataaactatttttgataagctcaacaataagccaatc 13056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 42839391 - 42839248
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||||||||| |||||||| |||||||||||| | || ||||||||||| |||||||||||    || || ||||||| |||    
T  42839391 aaataagtttttatgtattattcataagtttgtcaagttagtttatgaaa-accagcttatgaagatgcaattttcgtt----agagaaaacttatcaat 42839297  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaa 678  Q
    |||| |||||||||  ||| ||||||||||| ||||||| || ||||||    
T  42839296 taacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 42839248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 11776999 - 11777142
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||||  ||| |||||||||||||| |||| |||    ||||||||||||| ||     
T  11776999 aaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgtt----agtgagaacttataaac 11777094  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||| ||||| |||  ||||||||| ||||| |||||  |||||||||    
T  11777095 taacataaaaccttatttatttgcagaagctatttttaataagctcaa 11777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 538 - 679
Target Start/End: Original strand, 39592271 - 39592407
Alignment:
Q  538 cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgta 637  Q
    |||||||| ||||||||||||||||||||||||||||||||||  | | |||| ||||||| ||||||| ||    |||||||| |||||||| |||  |    
T  39592271 cttttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttcttt----agtgagaatttatgaataaac--a 39592364  T
Q  638 aaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||||||  || |||||||||||| |||||| |||||||||||    
T  39592365 aaagcttatttctttgcataagctatttttcataagctcaaaa 39592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 546 - 660
Target Start/End: Original strand, 42064881 - 42064992
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt- 644  Q
    |||||||||||||||||| |||||||||||| ||| || ||||||||||||||  |||||||||    ||| ||||||||||||||||  |||||||||     
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgtt----agtaagaacttatgaattaatataaaagctta 42064976  T
Q  645 gttatttgcataagct 660  Q
     |||||||||||||||    
T  42064977 tttatttgcataagct 42064992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 531 - 605
Target Start/End: Complemental strand, 43787874 - 43787800
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||| |||||||||||||||||||| |||||  |||||| |||||||| ||||||||||||||||||||||||    
T  43787874 aaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaatttt 43787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 540 - 684
Target Start/End: Original strand, 4533346 - 4533487
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatga-aagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||||||||||||| || |||||||| ||| ||||||| || ||||||| ||||| |||||||||| |||    ||||| ||||||||||||| | ||     
T  4533346 tttatgtattattca-aatcttgtcaaagtaatttatgataaaaacaactcatgaatatacaatttttgtt----agtgacaacttatgaattagcatag 4533440  T
Q  639 aagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    |||||| || ||||||||||||| |||||| ||||||||||||||||    
T  4533441 aagcttatttatttgcataagctatttttcataagctcaaaaataag 4533487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 12223833 - 12223951
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaataag----cttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||| |||| ||||||| | ||||| ||||||||||    |||| ||||||||||||||||| |||||||||||||||||||| ||||  |||||||||    
T  12223833 gtttggattggcttatttttaagcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaaga 12223932  T
Q  597 tacaattttcgttcgtgag 615  Q
    ||| |||||| || |||||    
T  12223933 taccattttcattagtgag 12223951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 666
Target Start/End: Complemental strand, 12683677 - 12683550
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| ||| |||||||||||||||||||||||  | | |||| |||| |||| ||||||||||||||||||| |||    | |||||||||||||||    
T  12683677 aaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggtt----actgagaacttatgaat 12683582  T
Q  631 taacgtaaaagcttgttatttgcataagctgttttt 666  Q
     ||| |||||||||    ||||||||||||||||||    
T  12683581 aaacataaaagctt----tttgcataagctgttttt 12683550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 15155828 - 15155973
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||||||||||| |||| ||||| || | ||||||||||| ||||| ||| |||| |||||||| ||||    | |||||||||||||||    
T  15155828 aaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaatttccgtt----aatgagaacttatgaat 15155923  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  |||||| |||||||| |||||| |||||||||||    
T  15155924 taagataaaaacttatttattttcataagctctttttcataagctcaaaa 15155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 687
Target Start/End: Original strand, 37409658 - 37409811
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||| |||||||||   || ||||||| ||||||||||||| ||||| ||||||| |||||||||| |||    | ||| |||||   |||    
T  37409658 aaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaatttttgtt----attgaaaacttcgaaat 37409753  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagcca 687  Q
    |||| ||||| ||| |||| ||| ||||||| |||||| |||||||||||||||||||    
T  37409754 taacataaaatcttagttacttgtataagctatttttcataagctcaaaaataagcca 37409811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 534 - 633
Target Start/End: Complemental strand, 755810 - 755714
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatta 632  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| ||| |||| ||||||||||||||||||| |||    |||||||||| ||||||||    
T  755810 taagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagatacaatttttgtt----agtgagaactaatgaatta 755715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 4090504 - 4090582
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||| |||| ||||||||||||||| ||||||||||||||  |||||| |||| |||| ||||||||||||||||||    
T  4090504 aaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaattttcgtt 4090582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 498 - 679
Target Start/End: Complemental strand, 12238591 - 12238412
Alignment:
Q  498 tccgtttgtattgacttatttatgagcttatgcaa----ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatga 593  Q
    |||||| | |||| |||||||  ||||||||||||    |||||| || |||||||||| |||||||||| ||||||||||||||   || |||||||||    
T  12238591 tccgttgggattggcttattttagagcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatga---aaaaacttatga 12238495  T
Q  594 agatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    | ||||||||||||||    ||| ||| ||||||||||||| |||| ||||  |||||| |||||  | |||||| |||||||||||    
T  12238494 acatacaattttcgtt----agtaagatcttatgaattaacataaatgcttaattattttcataatttttttttcataagctcaaaa 12238412  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 534 - 600
Target Start/End: Original strand, 12442831 - 12442897
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagataca 600  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||| | || ||||||||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 535 - 604
Target Start/End: Complemental strand, 2790137 - 2790068
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattt 604  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  2790137 aagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatgaagatacaattt 2790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 591
Target Start/End: Complemental strand, 34913461 - 34913401
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttat 591  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||    
T  34913461 aaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttat 34913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 683
Target Start/End: Complemental strand, 7480950 - 7480821
Alignment:
Q  550 attcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gtta 648  Q
    ||||||||| |||| |||||||||||| ||| ||||||||| ||||||||||||||| ||    ||| ||||||||||||||||| ||||| |||  |||    
T  7480950 attcataagtttgtgaaggtagtttataaaa-aacaacttaggaagatacaattttcatt----agtcagaacttatgaattaacataaaaacttattta 7480856  T
Q  649 tttgcataagctgtttttcgtaagctcaaaaataa 683  Q
    ||||||||| || |||||  |||||| ||| ||||    
T  7480855 tttgcataatctattttttataagctaaaagataa 7480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 586
Target Start/End: Original strand, 11072959 - 11073016
Alignment:
Q  530 caaataagcttttatgtatt-attcataagcttgtcaaggtagtttatgaaagaacaa 586  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||    
T  11072959 caaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaaaaaacaa 11073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 16108178 - 16108119
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||| ||||| |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttt 16108119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 585
Target Start/End: Complemental strand, 33321471 - 33321420
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaaca 585  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33321471 taagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaaca 33321420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 531 - 660
Target Start/End: Original strand, 5516090 - 5516217
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||| ||||| ||||||||||| |||| || |||||||||| ||| ||||  |||| || ||||||||||||||    ||||||| ||||| ||    
T  5516090 aaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaattttcgtt----agtgagagcttataaa 5516185  T
Q  630 ttaacgtaaaagctt-gttatttgcataagct 660  Q
    |||||  ||||||||  |||||||||||||||    
T  5516186 ttaacacaaaagcttatttatttgcataagct 5516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 8343062 - 8342993
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||| ||||||||||||| ||| |||||| || || || ||||||||||||||||||||||    
T  8343062 ttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgtt 8342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 12442904 - 12442982
Alignment:
Q  622 cttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatgggt 699  Q
    ||||||||||||| ||||||||| || || ||||||||||||||||| ||||||||||| ||||| |||| ||| ||||    
T  12442904 cttatgaattaacttaaaagcttatttatctgcataagctgtttttcataagctcaaaattaagctaatccaaacgggt 12442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 535 - 596
Target Start/End: Original strand, 13097936 - 13097998
Alignment:
Q  535 aagcttttatgtattatt-cataagcttgtcaaggtagtttatgaaagaacaacttatgaaga 596  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||| |||||||||||||||    
T  13097936 aagctttgatgtattatttcataagcttgtcaaagttgtttatgaaaaaacaacttatgaaga 13097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 633
Target Start/End: Complemental strand, 38471862 - 38471764
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||| |||||||||| ||||  |||||||| |  | ||||||||||||| ||||  |||||||| |||||||||||||    |||||||||||||||||    
T  38471862 aaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaattttcgtt----agtgagaacttatgaat 38471767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 684
Target Start/End: Complemental strand, 755700 - 755632
Alignment:
Q  617 gagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataag 684  Q
    ||||||| |||||||||| ||||||||| || ||||||||||||| |||||| |||||||||| |||||    
T  755700 gagaactaatgaattaacataaaagcttctttatttgcataagctatttttcataagctcaaagataag 755632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 698
Target Start/End: Original strand, 37420009 - 37420085
Alignment:
Q  623 ttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    |||||||||||| ||||||||| || ||||||||||  | |||||| |||||| ||||||||||||||| |||||||    
T  37420009 ttatgaattaacataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaatggg 37420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 4090505 - 4090462
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  4090505 ttatttgcataagctgttttgcataagctcaaaaataagccaat 4090462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 582 - 677
Target Start/End: Complemental strand, 12950135 - 12950043
Alignment:
Q  582 aacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||||||||||||| ||| ||||||||||    ||| ||| ||||||||||||| |||||||||  ||||||||||| ||| |||||| |||||||||    
T  12950135 aacaacttatgaatatagaattttcgtt----agtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctcaa 12950043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 499 - 690
Target Start/End: Complemental strand, 45163993 - 45163800
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaa----taagcttttatgtat-tattcataagcttgtcaaggtagtttatgaaagaacaacttatga 593  Q
    ||||||| ||||| |||||| | ||||||||||||    |||||||||||  |  ||||||||||||||| || ||| ||||| ||| ||||||||| ||    
T  45163993 ccgtttggattgagttattttttagcttatgcaaacaaataagcttttattaaactattcataagcttgtgaatgtaatttataaaaaaacaacttagga 45163894  T
Q  594 agatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||| ||  ||     ||| ||||||||||||| || | |||||||  |||| |||||||||| |||||| || |||||||| |||| |||||    
T  45163893 agatacaatatttatt----tgtgggaacttatgaattgacatgaaagcttatttatctgcataagctatttttcatatgctcaaaagtaagtcaatc 45163800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 646 - 688
Target Start/End: Original strand, 2790141 - 2790183
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  2790141 ttatttgcataagctgttttgcataagctcaaaaataagccaa 2790183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 543 - 605
Target Start/End: Original strand, 24439046 - 24439108
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||||||| |||| ||||| | |||||||||||||| |||||||||| || ||||||||||    
T  24439046 atgtattatttataatcttgttacggtagtttatgaaaaaacaacttataaacatacaatttt 24439108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 29133738 - 29133660
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||| ||||||||||||||||||||| ||||||  || |||| || || ||||  |||| |||||||||||||||||    
T  29133738 aaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatacaattttcgtt 29133660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 32366165 - 32366242
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| ||||  ||||||| |||| |||||||||    
T  32366165 aaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatgaatatacgattttcgtt 32366242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 32522116 - 32522039
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| ||||  | ||||||||||||||||||||    
T  32522116 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgtt 32522039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 660
Target Start/End: Complemental strand, 23956315 - 23956209
Alignment:
Q  551 ttcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttat 649  Q
    |||||||| |||| || |||||||||| || ||||  |||| |||||||||||||||||    | ||||||||||| ||||||| ||||| |||  ||||    
T  23956315 ttcataagtttgtaaatgtagtttatggaaaaacagtttataaagatacaattttcgtt----aatgagaacttataaattaacataaaaacttatttat 23956220  T
Q  650 ttgcataagct 660  Q
    |||||||||||    
T  23956219 ttgcataagct 23956209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 543 - 640
Target Start/End: Original strand, 735991 - 736084
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaa 640  Q
    |||||||||| |||||||||| ||||| |||||||||| || |  ||||||||||| |||||| |||    | ||||||||||| ||||||| |||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgtt----attgagaacttataaattaacataaaa 736084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Original strand, 5903742 - 5903786
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||    
T  5903742 ttatttgcataagctatttttcatgagctcaaaaataagccaatc 5903786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 646 - 690
Target Start/End: Complemental strand, 38216039 - 38215995
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  38216039 ttatttgcataagctgttttgcataagctcaaaaataagtcaatc 38215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 531 - 583
Target Start/End: Complemental strand, 41554651 - 41554599
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaa 583  Q
    |||||| ||||||||||||||||||||  |||| || ||||||||||||||||    
T  41554651 aaataaacttttatgtattattcataaatttgttaaagtagtttatgaaagaa 41554599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 646 - 688
Target Start/End: Complemental strand, 4026942 - 4026900
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    |||||||||||||| ||||| | ||||||||||||||||||||    
T  4026942 ttatttgcataagcagttttgcataagctcaaaaataagccaa 4026900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 531 - 597
Target Start/End: Complemental strand, 9140800 - 9140735
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||||| ||||||||||||| |||||| |||||||| |||||||||| || ||||  ||||||||||    
T  9140800 aaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 539 - 605
Target Start/End: Original strand, 12267020 - 12267086
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||| ||||||||| ||||||||||| | ||||||||||||| || |  ||||||||||| ||||||    
T  12267020 ttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttt 12267086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 539 - 605
Target Start/End: Original strand, 24007816 - 24007882
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||||||||||   ||| |||| |||||||||| ||||| ||||||||||||  ||||||||||    
T  24007816 ttttatgtattatttgaaagtttgttaaggtagtttgtgaaaaaacaacttatgagaatacaatttt 24007882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 565 - 679
Target Start/End: Complemental strand, 30382306 - 30382195
Alignment:
Q  565 aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtt 663  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||||||    ||||| | ||||| ||||||   ||||||||  |||||| ||||| || ||    
T  30382306 aaggttgtttacgaaagaacaatttaggaagatacaattttcgtt----agtgaaagcttataaattaaaacaaaagcttatttatttacataatctatt 30382211  T
Q  664 tttcgtaagctcaaaa 679  Q
    |||| |||||||||||    
T  30382210 tttcataagctcaaaa 30382195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 653 - 690
Target Start/End: Complemental strand, 13097925 - 13097888
Alignment:
Q  653 cataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  13097925 cataagctgttttgcataagctcaaaaataagccaatc 13097888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 539 - 580
Target Start/End: Original strand, 17546414 - 17546455
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  17546414 ttttatgtattatttataggcttgtcaaggtagtttacgaaa 17546455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 565 - 614
Target Start/End: Original strand, 17546473 - 17546522
Alignment:
Q  565 aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtga 614  Q
    |||||||||||||||| ||||||||||||| |||  ||||||||| ||||    
T  17546473 aaggtagtttatgaaaaaacaacttatgaatatatcattttcgttagtga 17546522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 9e-42; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 502 - 690
Target Start/End: Complemental strand, 43080038 - 43079849
Alignment:
Q  502 tttgtattgacttatttatgagcttatgcaa----ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagat 597  Q
    |||| |||| ||||||| | |||||||||||    |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  43080038 tttggattgtcttattttttagcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagat 43079939  T
Q  598 acaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||||    ||||||| ||||||||||||||||||| |||||||||  ||||||| ||||||| |||||| |||||||  ||||||| |||||    
T  43079938 acaatt----ttcgtgattgagaacttatgaattaacttaaaagcttatttatttgaataagctatttttcataagctcgtaaataagtcaatc 43079849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 535 - 679
Target Start/End: Complemental strand, 40240644 - 40240503
Alignment:
Q  535 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaac 634  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    ||||||| ||||||||||||     
T  40240644 aagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgtt----agtgagagcttatgaattaag 40240549  T
Q  635 gtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
     |||||||||  ||||||||||||||| |||||| |||||||||||    
T  40240548 ataaaagcttatttatttgcataagctatttttcataagctcaaaa 40240503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 531 - 688
Target Start/End: Complemental strand, 53218111 - 53217958
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    ||||||||||||| |||    
T  53218111 aaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgtt----agtgagaacttataaat 53218016  T
Q  631 taacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    |||  ||||||||| || | |||||| | | |||||| |||||| |||||||||||||    
T  53218015 taaaataaaagcttattttctgcataggatatttttcataagcttaaaaataagccaa 53217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 689
Target Start/End: Complemental strand, 40581148 - 40580992
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| | |||||||| ||||||||||||    ||||||||||||||||    
T  40581148 aaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaattttcgtt----agtgagaacttatgaa 40581053  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    ||||| ||||| |||  ||||||||||||| | |||||| | | |||||||||||||||||    
T  40581052 ttaacataaaatcttatttatttgcataagatatttttcatcaactcaaaaataagccaat 40580992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 499 - 697
Target Start/End: Complemental strand, 48597974 - 48597774
Alignment:
Q  499 ccgtttgtattgacttatttatgagcttatgcaaata----agcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    ||||||| |||| ||||||| | ||| ||||||||||    | |||||||  |||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  48597974 ccgtttggattggcttattttttagcctatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaa 48597875  T
Q  595 gatacaattttcgttcgtgagtgagaactt-atgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatcta 692  Q
    ||||||||||    |||| ||||||||||| |||||||||| |||||||||  ||||||||| |  || ||||||||||||||||||||||||||||| |    
T  48597874 gatacaattt----tcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgtaagctcaaaaataagccaatcca 48597779  T
Q  693 aatgg 697  Q
    |||||    
T  48597778 aatgg 48597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 531 - 688
Target Start/End: Complemental strand, 22809265 - 22809110
Alignment:
Q  531 aaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||    |   ||||||||||||    
T  22809265 aaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaattttcgtt----aagaagaacttatgaa 22809170  T
Q  630 ttaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    ||||| ||||| |||  ||||||||| ||||| | |||| ||||||||||||||| ||||    
T  22809169 ttaacataaaaacttatttatttgcacaagctttatttcataagctcaaaaataaaccaa 22809110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 688
Target Start/End: Original strand, 585035 - 585188
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||||||| |||||||| |||||| |  ||||||||||||||| ||||||||||||||||||||||||||||    |||  ||||||| ||||    
T  585035 aaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgtt----agtttgaacttaagaat 585130  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaa 688  Q
    |||| || |||||| || ||||| |||| || |||||| ||||||||||||||||||||    
T  585131 taacatataagcttattgatttgaataa-ctatttttcataagctcaaaaataagccaa 585188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 3845870 - 3846026
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| | |||| | |||||||||||| |||||| |    ||||| ||| |||||||    
T  3845870 aaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagcatatgaagataca-ttttcgct----agtgaaaacatatgaat 3845964  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttc-gtaagctcaaaaataagccaatc 690  Q
    |||| |||||||||  ||||||||||||||| ||| ||  |||||||||||||||| |||||    
T  3845965 taacataaaagcttatttatttgcataagctatttctcattaagctcaaaaataaggcaatc 3846026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 533 - 673
Target Start/End: Complemental strand, 34707782 - 34707645
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatta 632  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||| || | ||||||||||||||||||    || ||||||||| ||||||    
T  34707782 ataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgtt----agcgagaacttacgaatta 34707687  T
Q  633 acgtaaaagctt-gttatttgcataagctgtttttcgtaagc 673  Q
    || ||||| |||  |||||||| |||| | |||||| |||||    
T  34707686 acataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 643
Target Start/End: Complemental strand, 3870297 - 3870189
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||| ||    | |||||||||||||||    
T  3870297 aaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcatt----aatgagaacttatgaat 3870202  T
Q  631 taacgtaaaagct 643  Q
    |||| ||||||||    
T  3870201 taacataaaagct 3870189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 531 - 633
Target Start/End: Complemental strand, 52421212 - 52421107
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag---tgagaacttatg 627  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |  | |||||||||||||||| ||| | |||   ||||||||||||    
T  52421212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgagaactgagaacttatg 52421113  T
Q  628 aattaa 633  Q
    ||||||    
T  52421112 aattaa 52421107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 531 - 657
Target Start/End: Original strand, 10521169 - 10521292
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||| || ||| |||    ||||| ||||||| |||    
T  10521169 aaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgtt----agtgaaaacttataaat 10521264  T
Q  631 taacgtaaaagcttg-ttatttgcataa 657  Q
    || |||||||||||| ||||||||||||    
T  10521265 tatcgtaaaagcttgtttatttgcataa 10521292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 29270376 - 29270454
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||||||||||||||||||    
T  29270376 aaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaattttcgtt 29270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 531 - 658
Target Start/End: Complemental strand, 42956250 - 42956126
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| ||||||||||||||||||| |||||| | ||||||||||| | |||| ||||| |||||||||||||||||    ||||||||||||| |||    
T  42956250 aaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgtt----agtgagaacttataaat 42956155  T
Q  631 taacgtaaaagctt-gttatttgcataag 658  Q
    |||| ||||| |||  |||||||||||||    
T  42956154 taacataaaaacttatttatttgcataag 42956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 657
Target Start/End: Original strand, 10667413 - 10667536
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  ||||||||||| || ||| |||    ||||| |||||||  ||    
T  10667413 aaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgtt----agtgaaaacttatatat 10667508  T
Q  631 taacgtaaaagcttg-ttatttgcataa 657  Q
    || |||||||||||| ||||||||||||    
T  10667509 tatcgtaaaagcttgtttatttgcataa 10667536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 52021227 - 52021346
Alignment:
Q  501 gtttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaag 595  Q
    ||||| |||| || |||| | |||||||||||||||    |||||||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||    
T  52021227 gtttggattggctcattttttagcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaag 52021326  T
Q  596 atacaattttcgttcgtgag 615  Q
    ||| |||||||||| |||||    
T  52021327 atataattttcgttagtgag 52021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 20175008 - 20174866
Alignment:
Q  534 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    ||||| || |||||||||| |||| ||||  ||| |||||||||||| ||||||||||||| ||||||||||||||    ||| ||| |||||||||||     
T  20175008 taagcattaatgtattatttataaacttgctaagttagtttatgaaaaaacaacttatgaatatacaattttcgtt----agtaagatcttatgaattag 20174913  T
Q  634 cgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    | |||||||||  ||||||||||||||| |||||| ||| |||||||    
T  20174912 cataaaagcttatttatttgcataagctctttttcataacctcaaaa 20174866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 532 - 660
Target Start/End: Complemental strand, 23816240 - 23816116
Alignment:
Q  532 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaatt 631  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||| |||| |||||||||||||||    | || || ||||||||||||||||||    
T  23816240 aataagcttttat-tattattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaa----ctttggtcagtgagaacttatgaatt 23816146  T
Q  632 aacgtaaaagcttg-ttatttgcataagct 660  Q
    ||| || || |||| |||||| ||||||||    
T  23816145 aacatacaaccttgtttatttacataagct 23816116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 660
Target Start/End: Complemental strand, 45331366 - 45331240
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||||||| ||||||||||| |||  ||||||||||| |||| ||||||||||||||||||||| |    ||  ||||| |||||||    
T  45331366 aaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgct----agcaagaacatatgaat 45331271  T
Q  631 taacgtaaaagctt-gttatttgcataagct 660  Q
    |||| |||||| ||  |||||||||||||||    
T  45331270 taacataaaagtttatttatttgcataagct 45331240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 604
Target Start/End: Original strand, 51409408 - 51409481
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattt 604  Q
    |||||| ||||||| |||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||    
T  51409408 aaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaaattt 51409481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 543 - 679
Target Start/End: Original strand, 37243493 - 37243626
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| |||||||||| || ||||||||||||| || |  |||||||| |||| ||||| ||     |||||||||||||||||||  |||||||    
T  37243493 atgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtacacttttcatt----ggtgagaacttatgaattaagataaaagc 37243588  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||  ||||||||||||||| |||||| |||||||||||    
T  37243589 ttacttatttgcataagctctttttcataagctcaaaa 37243626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 543 - 677
Target Start/End: Original strand, 38524115 - 38524246
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| ||||  |||| |||||||||||||||| ||  | ||||||| || |||||||||||    ||| ||| ||||||||||||| |||||||    
T  38524115 atgtattatttataaatttgttaaggtagtttatgaaaaaatcatttatgaatatgcaattttcgtt----agtaagatcttatgaattaacataaaagc 38524210  T
Q  643 tt-gttatttgcataagctgtttttcgtaagctcaa 677  Q
    ||  ||||||||||||||| |||||| |||||||||    
T  38524211 ttatttatttgcataagctctttttcataagctcaa 38524246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 3876334 - 3876189
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||| ||||||||| |||||||||||| || || |||||||||||||||| ||||||||| |||| || | |||| |||    |||   |||||||||||    
T  3876334 aaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaaggtaaagtttttgtt----agttctaacttatgaat 3876239  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||| |||  ||||||||||||||| |||||| |||||||||||    
T  3876238 taatataaaaacttatttatttgcataagctatttttcataagctcaaaa 3876189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 10272137 - 10272290
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| |||||||||||||||||||||||  |||||| ||||| ||||| |||| ||||||| ||||||| ||||||||     | |||||||||||||    
T  10272137 aaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaaaacagcttatgaggatacaaatttcgttc----ataagaacttatgaat 10272230  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| || ||| ||  || |||||||||| | |||||| |||||| ||||||||| |||||    
T  10272231 taacatataagtttatttttttgcataag-tatttttcataagctaaaaaataaggcaatc 10272290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 540 - 633
Target Start/End: Complemental strand, 28741276 - 28741187
Alignment:
Q  540 tttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaa 633  Q
    ||||||||||| | |||||||||| || ||||||||||||| ||||  |||||||| |||||||||||||    ||||||||||||||||||||    
T  28741276 tttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgtt----agtgagaacttatgaattaa 28741187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 29614209 - 29614353
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| ||||  ||||||||||||||||||||||    ||||||| ||||| |||    
T  29614209 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgtt----agtgagagcttataaat 29614303  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  || || ||| || |||| |||||||| |||||| |||||||||||    
T  29614304 taaaatataaacttatttatttacataagctatttttcataagctcaaaa 29614353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 539 - 690
Target Start/End: Original strand, 20685809 - 20685956
Alignment:
Q  539 ttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaa 638  Q
    ||||||||||| | || |||||| | || ||||||||| ||| ||||||||||||||||||||||||| ||    ||||||||||| ||||||| | |||    
T  20685809 ttttatgtattgtccacaagctt-taaatgtagtttatcaaaaaacaacttatgaagatacaattttcatt----agtgagaacttgtgaattatcataa 20685903  T
Q  639 aagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    || |||  ||||||| ||||||  |||||| |||||| ||||||||| |||||    
T  20685904 aaacttatttatttggataagcaatttttcataagctaaaaaataagtcaatc 20685956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 543 - 677
Target Start/End: Original strand, 4974338 - 4974469
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagc 642  Q
    |||||||||| |||| ||||  |||||||||||||||| ||||| ||||||| ||||||| || ||| || |     | ||||||||||||| |||||||    
T  4974338 atgtattatttataaacttgctaaggtagtttatgaaaaaacaagttatgaatatacaatatttgttggtaaa----atcttatgaattaacataaaagc 4974433  T
Q  643 ttgtt-atttgcataagctgtttttcgtaagctcaa 677  Q
    || || ||||||||||||| |||||| |||||||||    
T  4974434 ttatttatttgcataagctctttttcataagctcaa 4974469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 677
Target Start/End: Complemental strand, 32901219 - 32901076
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| ||||||||| ||  |||| ||| |||||||| | | ||||||||||||||||| ||||||||||    |||||||||||||   |    
T  32901219 aaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgtt----agtgagaacttatattt 32901124  T
Q  631 taacgtaaaagc-ttgttatttgcataagctgtttttcgtaagctcaa 677  Q
    |||  ||||| | |  ||||||||||||||| |||||| |||||||||    
T  32901123 taatataaaaacatatttatttgcataagctatttttcataagctcaa 32901076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 539 - 641
Target Start/End: Complemental strand, 24842170 - 24842071
Alignment:
Q  539 ttttatgtattattcataagcttgtcaag-gtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgta 637  Q
    |||||||||||||||||||| |||||||  ||| ||||||||| |||||||||||||||||||||||   ||||| ||| | ||||||| ||||||| ||    
T  24842170 ttttatgtattattcataagtttgtcaaatgtaatttatgaaa-aacaacttatgaagatacaattt---ttcgttagtaaaaacttataaattaacata 24842075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 598
Target Start/End: Complemental strand, 32900797 - 32900732
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    |||||||||||| |||||||||||| ||||| |||||||||| ||||| || ||||||||||||||    
T  32900797 ataagcttttatttattattcataaacttgttaaggtagtttgtgaaaaaataacttatgaagata 32900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 3645318 - 3645462
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||| |||||||||||||| ||||  || | |||||||||||||||| ||||  | ||||||||||||||||||||    ||||||| ||||| |||    
T  3645318 aaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgtt----agtgagagcttataaat 3645412  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  || || ||| || |||| |||||||| |||||| |||||||||||    
T  3645413 taaaatataaacttatttatttacataagctatttttcataagctcaaaa 3645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 571 - 679
Target Start/End: Complemental strand, 17752162 - 17752057
Alignment:
Q  571 gtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgt 669  Q
    |||||||||||| ||  ||||||||||||||||||||||    ||| ||||||||| ||||||| |||||| ||  |||||| |||||||| |||||| |    
T  17752162 gtttatgaaagatcagtttatgaagatacaattttcgtt----agtaagaacttataaattaacataaaagtttatttatttacataagctatttttcat 17752067  T
Q  670 aagctcaaaa 679  Q
    ||||||||||    
T  17752066 aagctcaaaa 17752057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 571 - 679
Target Start/End: Complemental strand, 19053482 - 19053377
Alignment:
Q  571 gtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgt 669  Q
    |||||||||||| ||  ||||||||||||||||||||||    ||| ||||||||| ||||||| |||||| ||  |||||| |||||||| |||||| |    
T  19053482 gtttatgaaagatcagtttatgaagatacaattttcgtt----agtaagaacttataaattaacataaaagtttatttatttacataagctatttttcat 19053387  T
Q  670 aagctcaaaa 679  Q
    ||||||||||    
T  19053386 aagctcaaaa 19053377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 565 - 677
Target Start/End: Complemental strand, 33946587 - 33946478
Alignment:
Q  565 aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtt 663  Q
    |||||| ||||||||| | ||||||||| ||||| ||||||||||    | ||||||||||||||||||  ||||||||  || ||||||||||||| ||    
T  33946587 aaggtaatttatgaaaaaccaacttatgtagataaaattttcgtt----aatgagaacttatgaattaatataaaagctcatttatttgcataagctatt 33946492  T
Q  664 tttcgtaagctcaa 677  Q
    |||| |||||||||    
T  33946491 tttcataagctcaa 33946478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 687
Target Start/End: Original strand, 38631088 - 38631160
Alignment:
Q  616 tgagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagcca 687  Q
    |||||||||||||||||| |||||||  | || |||||||||||||| |||||||| ||||||||||||||||    
T  38631088 tgagaacttatgaattaatgtaaaagaatatttatttgcataagctggttttcgtaggctcaaaaataagcca 38631160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 531 - 615
Target Start/End: Complemental strand, 43971918 - 43971834
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||||||||||||| ||||||||| ||| |||| ||  |||||||||| | ||||| ||||||||||| |||||||||| |||||    
T  43971918 aaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgag 43971834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 572 - 683
Target Start/End: Complemental strand, 52895435 - 52895327
Alignment:
Q  572 tttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgta 670  Q
    ||||| ||| |||||||| ||||| |||||||||||||    |||||||| |||||||||||| |||||||||  |||||||| ||| |  |||||| ||    
T  52895435 tttatcaaaaaacaacttctgaagttacaattttcgtt----agtgagaatttatgaattaacataaaagcttatttatttgcctaaacaatttttcata 52895340  T
Q  671 agctcaaaaataa 683  Q
    |||||||||||||    
T  52895339 agctcaaaaataa 52895327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 11528906 - 11528980
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    |||||||||||||||||||||||||||  |||| || ||||||||||| | || || ||||||||||| ||||||    
T  11528906 aaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagatataatttt 11528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 617 - 690
Target Start/End: Complemental strand, 46573443 - 46573369
Alignment:
Q  617 gagaacttatgaattaacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    ||||| |||||||||||| ||||||||| || ||||||||||||| |||||| |||||| |||||||||| ||||    
T  46573443 gagaatttatgaattaacataaaagcttatttatttgcataagctatttttcctaagctaaaaaataagcgaatc 46573369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 608 - 696
Target Start/End: Complemental strand, 53261766 - 53261676
Alignment:
Q  608 ttcgtgagtgagaacttatgaattaacg-taaaagcttgtt-atttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatg 696  Q
    ||||| |||||||||||||||||||||  ||||||||| || | ||||||||||| |||||| ||||||||||| |||| ||||| |||||    
T  53261766 ttcgtcagtgagaacttatgaattaacaataaaagcttatttaattgcataagctatttttcataagctcaaaactaagtcaatccaaatg 53261676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 615
Target Start/End: Complemental strand, 47403834 - 47403749
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    ||||||| ||||| |||||||||||||  |||| || |||||||||| ||| || || |||||||||||||||||||||| |||||    
T  47403834 aaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatgaagatacaattttcgtttgtgag 47403749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 603
Target Start/End: Complemental strand, 2086762 - 2086690
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatt 603  Q
    |||||| ||||||||||||||| |||| ||||| ||||| |||||||||| || |  ||||||||||||||||    
T  2086762 aaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaagatacaatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 694
Target Start/End: Complemental strand, 30321689 - 30321641
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaa 694  Q
    ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  30321689 ttatttgcataagctatttttcttaagctaaaaaataagccaatctaaa 30321641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 698
Target Start/End: Original strand, 53261817 - 53261869
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaatctaaatggg 698  Q
    |||||||||||||||||| | | |||||||||||||||||||||| |||||||    
T  53261817 ttatttgcataagctgttgtccataagctcaaaaataagccaatccaaatggg 53261869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 606
Target Start/End: Original strand, 10448789 - 10448864
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    ||||| || ||||||||||||| |||||||||| || ||||||||||||| ||||  |||||||| || |||||||    
T  10448789 aaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttc 10448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 543 - 594
Target Start/End: Complemental strand, 30473202 - 30473151
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaa 594  Q
    |||||||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  30473202 atgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaa 30473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 549 - 615
Target Start/End: Original strand, 7300396 - 7300462
Alignment:
Q  549 tattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgag 615  Q
    |||| ||| |||| ||||| |||||||||||| | |||||||| ||||||||||||||||| |||||    
T  7300396 tattgatatgcttatcaagatagtttatgaaaaatcaacttataaagatacaattttcgttagtgag 7300462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 5129886 - 5129837
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||    
T  5129886 aaataagttttaatgtattattcataagcttgtcaatgtactttatgaaa 5129837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 598
Target Start/End: Original strand, 7292697 - 7292762
Alignment:
Q  533 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagata 598  Q
    ||||||| |||||||||||||||||| |||||||  |||||||||||| ||||  |||||| ||||    
T  7292697 ataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 684
Target Start/End: Original strand, 29002740 - 29002879
Alignment:
Q  544 tgtattattcataagcttgtcaaggtagtttatg--aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatg-aattaacgtaaaa 640  Q
    ||||||||||||||||||||||| ||| ||||||  ||| || |||||||||||||| |||     ||||| ||| |||||||||| || |||| |||||    
T  29002740 tgtattattcataagcttgtcaaagtaatttatgaaaaaaaataacttatgaagatataat-----ttcgttagtaagaacttatgaaaataacataaaa 29002834  T
Q  641 gctt-gttatttgcataagctgtttttcgtaagctcaaaaataag 684  Q
     |||  ||||||||||||  | |||||  ||||||||||||||||    
T  29002835 tcttatttatttgcataaagtattttttataagctcaaaaataag 29002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 560 - 660
Target Start/End: Original strand, 48816759 - 48816856
Alignment:
Q  560 ttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataag 658  Q
    |||| ||||||||||| |||  ||||||||||||| ||||||||||||||     || ||| ||||| ||||||| |||||||||  |||||||||||||    
T  48816759 ttgttaaggtagtttaagaataaacaacttatgaatatacaattttcgtt----ggtaagatcttataaattaacttaaaagcttatttatttgcataag 48816854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 4257372 - 4257295
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaa--caacttatgaagatacaattttcg 607  Q
    ||||||| |||||||||||||| ||||| || | |||||||||||||||| ||  ||  ||||||||||||||||||||    
T  4257372 aaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaaacagtttatgaagatacaattttcg 4257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 19307979 - 19308030
Alignment:
Q  554 ataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||| |||| |||||||||||||||| |||||| |||||| ||||||||||    
T  19307979 ataagtttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttt 19308030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 20365491 - 20365432
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaatttt 605  Q
    ||||||||||||||||||||| ||| ||||||||| | ||  ||||||||||| ||||||    
T  20365491 tattattcataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataatttt 20365432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 689
Target Start/End: Complemental strand, 20685787 - 20685744
Alignment:
Q  646 ttatttgcataagctgtttttcgtaagctcaaaaataagccaat 689  Q
    |||||||| ||||||||||| | |||||||||||||||||||||    
T  20685787 ttatttgcgtaagctgttttgcataagctcaaaaataagccaat 20685744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 606
Target Start/End: Original strand, 30383795 - 30383858
Alignment:
Q  543 atgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttc 606  Q
    |||| ||||| ||||  |||| |||||||||||||||| |||||| |||||| |||||||||||    
T  30383795 atgtgttatttataaatttgttaaggtagtttatgaaaaaacaacctatgaatatacaattttc 30383858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 531 - 580
Target Start/End: Original strand, 21296781 - 21296830
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 580  Q
    ||||||| |||||| ||||||||||| | || ||||||||||||||||||    
T  21296781 aaataagtttttatctattattcatacgtttatcaaggtagtttatgaaa 21296830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 590 - 679
Target Start/End: Original strand, 21720981 - 21721067
Alignment:
Q  590 atgaagatacaattttcgttcgtgagtgagaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    ||||||||||||||||||||    ||||||||||||||| ||||| |||||  ||  || |||||||||||| |||||| ||| |||||||    
T  21720981 atgaagatacaattttcgtt----agtgagaacttatgacttaacataaaaaattacttttttgcataagctatttttcataaactcaaaa 21721067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 548 - 601
Target Start/End: Original strand, 43069078 - 43069131
Alignment:
Q  548 ttattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaa 601  Q
    ||||||||||| |||||||| |||||||||| | |||| ||||||| |||||||    
T  43069078 ttattcataagtttgtcaagatagtttatgagaaaacagcttatgaggatacaa 43069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 690
Target Start/End: Original strand, 24760 - 24918
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatga 628  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| |||| || || |||||||||| ||| ||    ||||||||||||| |    
T  24760 aaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcatt----agtgagaacttataa 24855  T
Q  629 attaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||| ||||| |||  |||||||||||||||  ||||| |||||||||||||||| |||||    
T  24856 attaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatc 24918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 97277 - 97121
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||| |||||   |||||||||||||||    |||||||||||||||||    
T  97277 aaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttat---gatacaattttcgtt----agtgagaacttatgaat 97185  T
Q  631 taacgt---aaaag-cttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| |   ||||| ||| |||||||||| ||||||||| |  ||||||||||||||| |||||    
T  97184 taacattaaaaaagcctttttatttgcattagctgttttgcaaaagctcaaaaataagtcaatc 97121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 522 - 680
Target Start/End: Complemental strand, 24472 - 24314
Alignment:
Q  522 agcttatgcaaataa---gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtga 618  Q
    |||||||||||||||   |||| |||||||||||||||||||||||||||||||| || ||| ||||||||| ||||||| ||||||||||    ||| |    
T  24472 agcttatgcaaataaatagcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatataattttcgtt----agtaa 24377  T
Q  619 gaacttatgaattaacgtaaaag-cttgttatttgcataagctgtttttcgtaagctcaaaaa 680  Q
     ||||| ||||||| | |||||| ||  |||||||||||| ||  ||||| ||||||||||||    
T  24376 aaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagctcaaaaa 24314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 43887 - 43808
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttat-gaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||  ||| ||| ||||| ||||||| |||| |||||    
T  43887 aaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaaacgacttaggaagatataattgtcgtt 43808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 4080 - 4222
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    ||||||||||| |||||||||| |||||||||| ||| |||||||||||| || | |||||| | ||||||||||||||    |||| |||||||| |||    
T  4080 aaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgtt----agtgggaacttataaat 4174  T
Q  631 taacgtaaaagcttgtt-atttgcataagctgtttttcgtaagctcaa 677  Q
    |||| ||||||||  || ||||||||||||| |||||| |||||||||    
T  4175 taacataaaagctcattgatttgcataagctatttttcataagctcaa 4222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 109063 - 108987
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||  || |||||||||||||||||||||||||    
T  109063 aaataagcctttatgtattactcataagcttgtcaaggtggtttatgaa--aaaaacttatgaagatacaattttcgtt 108987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 676
Target Start/End: Complemental strand, 14817 - 14676
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||||||||||||||||| || | || ||||||||||||| | ||  |||| || ||||||||||||||    ||||||||||||| |||    
T  14817 aaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgtt----agtgagaacttataaat 14722  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctca 676  Q
    |||| | |||||||  ||||||||||||| |||||| | ||||||||    
T  14721 taacatgaaagcttatttatttgcataag-tgttttgcataagctca 14676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 14925 - 14848
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaa-caacttatgaagatacaattttcg 607  Q
    |||||||||||||||||| ||||||||| || | || |||||| |||||| || ||  |||| |||||||||||||||    
T  14925 aaataagcttttatgtatcattcataagtttttaaatgtagttaatgaaaaaatcagtttataaagatacaattttcg 14848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 531 - 679
Target Start/End: Complemental strand, 11371 - 11227
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||| ||| ||||||| |||||| |||||| || || ||||||||||||||||  |||| ||    |||||||||||||   |    
T  11371 aaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagatacatatttcatt----agtgagaacttatactt 11276  T
Q  631 taacgtaaaagcttgttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  ||||||||| ||||||||||||| | |||||| |||||| ||||    
T  11275 taatataaaagcttattatttgcataagttatttttcataagcttaaaa 11227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 531 - 679
Target Start/End: Original strand, 1073 - 1218
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||||||||||| |||||| |||||| |||| |||||| |||||| || || ||||||||||||||||| |||| ||    |||||||||||||   |    
T  1073 aaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcatt----agtgagaacttatactt 1168  T
Q  631 taacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaa 679  Q
    |||  |||||||||  ||||||||||||| | |||||| |||||| ||||    
T  1169 taatataaaagcttatttatttgcataagttatttttcataagcttaaaa 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 58939 - 58783
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaat 630  Q
    |||||| | |||||||||||||| |||| ||||||| ||||||||||||| |  |  ||||||||||||||||| ||||    ||||| ||||||| | |    
T  58939 aaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatacaatttccgtt----agtgaaaacttataatt 58844  T
Q  631 taacgtaaaagc-ttgttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||| ||| ||| |  ||||||||||||||| |||||  |||| | |||||||||||||||    
T  58843 taacataatagcatatttatttgcataagctattttttataagtttaaaaataagccaatc 58783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 644
Target Start/End: Original strand, 227721 - 227831
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgttcgtgagtgagaacttatgaa 629  Q
    |||||||| || ||||| |||| ||||| |||| ||||||||||||| ||| |||| |||||||| ||||||||||||||    ||| ||| ||||||||    
T  227721 aaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgtt----agtaagatcttatgaa 227816  T
Q  630 ttaacgtaaaagctt 644  Q
    ||||| |||||||||    
T  227817 ttaacataaaagctt 227831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 546 - 609
Target Start/End: Original strand, 1324 - 1387
Alignment:
Q  546 tattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatacaattttcgtt 609  Q
    ||||||| ||||| |||| |||||||||||||||| ||||| |||| || ||||||||||||||    
T  1324 tattatttataagtttgttaaggtagtttatgaaaaaacaagttataaatatacaattttcgtt 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 511 - 599
Target Start/End: Original strand, 142331 - 142422
Alignment:
Q  511 acttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtttatgaaagaacaacttatgaagatac 599  Q
    |||||||| |||||||||||||||||    ||||||||||||||||||||  ||| | || ||| ||||||||| ||||| ||||||||||||    
T  142331 acttattt-tgagcttatgcaaataaatgagcttttatgtattattcatatacttattaatgtaatttatgaaaaaacaaattatgaagatac 142422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 178515 - 178594
Alignment:
Q  531 aaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaagaacaacttatgaagatacaattttcgtt 609  Q
    |||||||||||||||||||||| ||||| || | |||||| |||||| ||| || |  ||||||||||||||||||||||    
T  178515 aaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattttcgtt 178594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 619 - 690
Target Start/End: Complemental strand, 48615 - 48543
Alignment:
Q  619 gaacttatgaattaacgtaaaagctt-gttatttgcataagctgtttttcgtaagctcaaaaataagccaatc 690  Q
    |||||||||||||||| |||||||||  ||||||||||||||| ||||   |||||| ||||||||| |||||    
T  48615 gaacttatgaattaacataaaagcttatttatttgcataagctattttgtataagctaaaaaataagtcaatc 48543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 502 - 573
Target Start/End: Complemental strand, 89357 - 89282
Alignment:
Q  502 tttgtattgacttatttatgagcttatgcaaataa----gcttttatgtattattcataagcttgtcaaggtagtt 573  Q
    |||| |||||||||||| | |||||||||||||||    | ||| ||||| ||||||||||||| |||||||||||    
T  89357 tttggattgacttatttttaagcttatgcaaataaaaaagttttaatgtactattcataagcttatcaaggtagtt 89282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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