View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5291R-Insertion-5 (Length: 290)
Name: NF5291R-Insertion-5
Description: NF5291R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5291R-Insertion-5 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 58 - 287
Target Start/End: Original strand, 25715978 - 25716207
Alignment:
| Q |
58 |
caatgcaatgtcccacatttccttctttttccggccaacaaagcacaagctggcaaaaatatggttcacacaattcagattcatccaaccacgacacaat |
157 |
Q |
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| T |
25715978 |
caatgcaatgtcacacatttccttatttttctgggcaacaaagcacaagctggcaaaaatatggttaacacaattcagattcatcgaaccaggacacaat |
25716077 |
T |
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| Q |
158 |
ttttgtttctttaatttagtgttacccatcaattctactactggtttagaaatgtttcacaatataaaaatttcttcaaagactcacgacttccattaca |
257 |
Q |
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| T |
25716078 |
ttttgtttctttaatttagtgtcactcatcaattctattaatggtttagaaatgtttcacaatataaaaatttcttcaaagactcacgacaaccatcgaa |
25716177 |
T |
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| Q |
258 |
cgtggagaattgaaaactaagctgatactg |
287 |
Q |
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| T |
25716178 |
cgtggagaattgaaaacgaagctgaaactg |
25716207 |
T |
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