View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5291R-Insertion-9 (Length: 172)
Name: NF5291R-Insertion-9
Description: NF5291R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5291R-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 52; Significance: 4e-21; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 42603032 - 42602981
Alignment:
| Q |
45 |
atgtttcaccttctaaatgatcacacttgtgtgaaaatatattttcgaacaa |
96 |
Q |
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| T |
42603032 |
atgtttcaccttctaaatgatcacacttgtgtgaaaatatattttcgaacaa |
42602981 |
T |
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Target: chr7; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 42602949 - 42602906
Alignment:
| Q |
129 |
caaagtgtaatgctaaagtgcataacgttggtccaaattgctat |
172 |
Q |
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| T |
42602949 |
caaagtgtaatgctaaagtgcataacgttggtccaaattgctat |
42602906 |
T |
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