View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5292_high_14 (Length: 321)
Name: NF5292_high_14
Description: NF5292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5292_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 2 - 289
Target Start/End: Complemental strand, 11184859 - 11184572
Alignment:
| Q |
2 |
caatcaatatggtgtagactggaaaaggaaaacacgtgcaattctatactgaacatatacattgactcatcatgtctttatgttgtatatgcaggtgagt |
101 |
Q |
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| T |
11184859 |
caatcaatatggtgtagactggaaaaggaaaacacgtgcaattctatactgaacatatacattgactcatcatgtctttatgttgtatatgcaggtgagt |
11184760 |
T |
|
| Q |
102 |
tactgtgtccttttccttcattgtaaagtatggtacataagaagtaaacattcagaaatagcatgctccctttgcaaatcaatcaaattgctttagcata |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11184759 |
tactgtgtccttttccttcattgtaaagtatggtacataagaagtaaacattcagaaatagcatgctccctttgcaaatcaatcaaattgctttagcata |
11184660 |
T |
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| Q |
202 |
gaatggttggtaccaatataaaaacgaaactgatttattgaagtttgcacctttgttcagaagaatagttggtacttttctctttttc |
289 |
Q |
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| T |
11184659 |
ggatagttggtaccaatataaaaacgaaactgatttattgaagtttgcacctttgttcagaagaatagttggtacttttctctttttc |
11184572 |
T |
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