View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5294-Insertion-2 (Length: 353)
Name: NF5294-Insertion-2
Description: NF5294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5294-Insertion-2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 20 - 353
Target Start/End: Original strand, 42223121 - 42223454
Alignment:
| Q |
20 |
ttgatattcaatttgttggttattattctctgtgtaaggggctttttggaatgtaaattttttcccacccacctcaacatcaaagtcgtgaataacgtat |
119 |
Q |
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| T |
42223121 |
ttgatattcaatttgttggttattattctctgtgtaaggggctttttggaatgtaaattttttcccacccatctcaacatcaaagtcgtgaataacgtat |
42223220 |
T |
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| Q |
120 |
tctataacataatgtgctcctgaagactgttacttggtaaataacaattaatatggtgaaatgaaattgactaagaagatatttataaattaaaattctg |
219 |
Q |
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| T |
42223221 |
tctataacataatgtgctcctgaagactgttacttggtaaataacaattaatatggtgaaatgaaattgactaagaagatatttataaattaaaattctg |
42223320 |
T |
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| Q |
220 |
gtgggtggatgcgatctgattacatttcagcccaaaagatgcaagtgcaactctgtaagagaagtgtgctgcttaataaacttcaggcattgctttaggc |
319 |
Q |
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| T |
42223321 |
gtgggtggatgtgatctgattacatttcagcccaaaagatgcaagtgcaactctgtaagagaagtgtgctgcttaataaacttcaggcattgctttaggc |
42223420 |
T |
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| Q |
320 |
aatgataaaattgcatctttaaaaacaaaacatc |
353 |
Q |
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| T |
42223421 |
aatgataaaattgcatctttaaaaacaaaacatc |
42223454 |
T |
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