View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5294_high_43 (Length: 252)
Name: NF5294_high_43
Description: NF5294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5294_high_43 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 34046042 - 34046211
Alignment:
| Q |
83 |
aaatacaaaaaatgcaataataatagtcaacaattcttaacaagaccaattaaatgttataagctgctcaatctaatttaacaagtgattggaggggtca |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||| |
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| T |
34046042 |
aaatacaaaaaatgcaataataatagtcaacaattcttaataagatcaattaaatgtcataagctactcaatctaattaaacaagtgattggagggatca |
34046141 |
T |
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| Q |
183 |
tgatttactcctctcaactttcaccgtaaatagtacaacccttatataatttcactttataatgagaatc |
252 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34046142 |
tgatttactcctctcaactctcaccgtaaatagtacaacccttatataatttcactttataatgagaatc |
34046211 |
T |
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