View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5294_low_18 (Length: 415)
Name: NF5294_low_18
Description: NF5294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5294_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 13 - 395
Target Start/End: Original strand, 26935851 - 26936233
Alignment:
| Q |
13 |
aatatcaaatggcaaagtttcaattttccaactgatgtaatgctatggggccagcaacttgatgtagcgactcgattaacatcgtcgcgaaccaactcaa |
112 |
Q |
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| T |
26935851 |
aatatcaaatggcaaagtttcaattttccaactgatgtaatgctatggggccagcaacttgatgtagcgactcgattaacatcgtcgcgaaccaactcaa |
26935950 |
T |
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| Q |
113 |
gcatgttctactcattcgaaatcgagaataacaaggttgctttgtatgtaaactctggtgagttaaggtattcttattggaactttcagccttcaatgaa |
212 |
Q |
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| T |
26935951 |
gcatgttctactcattcgaaatcgagaataacaaggttgctttgtatgtaaactctggtgagttaaggtattcttattggaactttcagccttcaatgaa |
26936050 |
T |
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| Q |
213 |
tagaagcattacatatattaagctgagttcaaaagggttgttattgtttgatacaaaatacaagaaaattgcacaaattccatctcaaagtattcaacca |
312 |
Q |
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| T |
26936051 |
tagaagcattacatatattaagctgagttcaaaagggttgttattgtttgatacaaaatacaagaaaattgcacaaattccatctcaaagtattcaacct |
26936150 |
T |
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| Q |
313 |
ctaaaatttttagcattgaagaatgaaacaggaaattttggtctttattactattcacaagagaaaggaaaatttgaggcttc |
395 |
Q |
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| T |
26936151 |
ctaaaatttttagcactgaagaatgaaacaggaaattttggtctttattactattcacaagagaaaggaaaatttgaggcttc |
26936233 |
T |
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