View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5295_low_6 (Length: 238)

Name: NF5295_low_6
Description: NF5295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5295_low_6
NF5295_low_6
[»] chr4 (21 HSPs)
chr4 (11-238)||(10644219-10644457)
chr4 (11-238)||(47357654-47357892)
chr4 (19-203)||(13048293-13048477)
chr4 (11-203)||(15675161-15675352)
chr4 (11-203)||(31115629-31115820)
chr4 (11-203)||(13246430-13246621)
chr4 (11-203)||(54118316-54118507)
chr4 (79-203)||(10104322-10104445)
chr4 (11-203)||(26680201-26680391)
chr4 (112-201)||(121990-122078)
chr4 (79-199)||(40885630-40885749)
chr4 (11-100)||(111395-111484)
chr4 (79-199)||(8374576-8374696)
chr4 (79-199)||(17145725-17145845)
chr4 (11-55)||(10104450-10104494)
chr4 (128-203)||(10488678-10488753)
chr4 (128-203)||(16327998-16328073)
chr4 (79-192)||(18248286-18248399)
chr4 (79-120)||(13590213-13590254)
chr4 (102-202)||(7850090-7850190)
chr4 (79-119)||(18276501-18276541)
[»] chr3 (30 HSPs)
chr3 (11-238)||(16821139-16821377)
chr3 (11-238)||(55316219-55316457)
chr3 (11-238)||(41270075-41270313)
chr3 (11-203)||(13975793-13975985)
chr3 (11-203)||(45860805-45860997)
chr3 (11-203)||(14842633-14842824)
chr3 (11-203)||(13954961-13955153)
chr3 (11-203)||(15936699-15936890)
chr3 (14-203)||(15938541-15938729)
chr3 (11-203)||(15859096-15859287)
chr3 (10-203)||(51158090-51158282)
chr3 (11-201)||(2049810-2049999)
chr3 (11-201)||(12030221-12030410)
chr3 (15-201)||(15614838-15615023)
chr3 (22-203)||(13838905-13839085)
chr3 (11-203)||(17912554-17912744)
chr3 (11-124)||(47984650-47984763)
chr3 (11-124)||(47993937-47994050)
chr3 (11-124)||(48003224-48003337)
chr3 (11-124)||(48012510-48012623)
chr3 (11-203)||(16744187-16744377)
chr3 (79-199)||(12264860-12264981)
chr3 (11-107)||(15468500-15468596)
chr3 (11-107)||(22275209-22275305)
chr3 (128-203)||(2449310-2449385)
chr3 (79-203)||(11986238-11986362)
chr3 (83-203)||(54651529-54651649)
chr3 (79-120)||(11638424-11638465)
chr3 (79-123)||(15876135-15876179)
chr3 (77-145)||(16880188-16880256)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-203)||(42997-43189)
[»] chr8 (24 HSPs)
chr8 (11-238)||(30120722-30120960)
chr8 (11-200)||(222754-222943)
chr8 (11-200)||(736377-736566)
chr8 (11-200)||(860272-860461)
chr8 (11-238)||(21844586-21844824)
chr8 (11-238)||(21851979-21852217)
chr8 (11-203)||(16674452-16674644)
chr8 (11-203)||(43373540-43373731)
chr8 (10-203)||(16193788-16193980)
chr8 (15-203)||(6774318-6774505)
chr8 (15-238)||(24548986-24549219)
chr8 (22-203)||(24928863-24929043)
chr8 (11-203)||(16405047-16405235)
chr8 (22-203)||(17345581-17345760)
chr8 (11-203)||(22907286-22907476)
chr8 (139-200)||(691909-691970)
chr8 (79-199)||(16195298-16195419)
chr8 (128-203)||(5238203-5238278)
chr8 (128-203)||(24661320-24661395)
chr8 (128-203)||(43685662-43685737)
chr8 (199-238)||(6774272-6774311)
chr8 (79-120)||(5854681-5854722)
chr8 (79-120)||(22497348-22497389)
chr8 (79-120)||(38533716-38533757)
[»] chr6 (14 HSPs)
chr6 (11-238)||(25175563-25175801)
chr6 (11-238)||(27653997-27654235)
chr6 (11-238)||(16825766-16826006)
chr6 (15-238)||(14626144-14626377)
chr6 (15-203)||(1650165-1650352)
chr6 (11-203)||(35009511-35009702)
chr6 (22-203)||(23153458-23153638)
chr6 (22-203)||(1657820-1657999)
chr6 (11-194)||(27740838-27741021)
chr6 (79-203)||(29665941-29666065)
chr6 (22-203)||(15862484-15862662)
chr6 (199-233)||(15862669-15862703)
chr6 (79-120)||(18399005-18399046)
chr6 (200-232)||(27751624-27751656)
[»] chr5 (27 HSPs)
chr5 (11-238)||(18778006-18778244)
chr5 (11-238)||(22366495-22366733)
chr5 (11-238)||(25426628-25426866)
chr5 (11-238)||(43443409-43443647)
chr5 (11-238)||(12374-12612)
chr5 (11-203)||(4200045-4200237)
chr5 (11-238)||(19499899-19500137)
chr5 (11-238)||(27009841-27010079)
chr5 (11-238)||(21073609-21073847)
chr5 (11-203)||(23506965-23507156)
chr5 (11-203)||(22053905-22054096)
chr5 (11-203)||(18531139-18531330)
chr5 (11-203)||(27182619-27182810)
chr5 (63-203)||(29188344-29188483)
chr5 (22-203)||(34939289-34939468)
chr5 (79-193)||(35791172-35791287)
chr5 (128-203)||(20623085-20623160)
chr5 (128-203)||(21233600-21233675)
chr5 (15-55)||(29190482-29190522)
chr5 (128-203)||(16536313-16536388)
chr5 (199-238)||(29188298-29188337)
chr5 (79-203)||(32950761-32950886)
chr5 (79-199)||(11212133-11212253)
chr5 (11-105)||(17471750-17471844)
chr5 (199-233)||(34939475-34939509)
chr5 (201-238)||(4199999-4200036)
chr5 (79-120)||(21617083-21617124)
[»] chr7 (23 HSPs)
chr7 (11-203)||(13911084-13911277)
chr7 (11-238)||(13572676-13572914)
chr7 (11-238)||(10989410-10989647)
chr7 (11-238)||(2437457-2437695)
chr7 (11-203)||(18253907-18254098)
chr7 (17-203)||(25292410-25292595)
chr7 (11-203)||(36052667-36052855)
chr7 (11-203)||(16479022-16479213)
chr7 (13-201)||(16211768-16211955)
chr7 (11-203)||(47481103-47481294)
chr7 (11-198)||(3059966-3060152)
chr7 (16-203)||(11580811-11580997)
chr7 (11-203)||(13037086-13037277)
chr7 (11-203)||(13321014-13321207)
chr7 (11-203)||(7293017-7293207)
chr7 (128-203)||(11516343-11516418)
chr7 (128-203)||(15441636-15441711)
chr7 (128-203)||(30262201-30262276)
chr7 (14-203)||(296038-296224)
chr7 (199-233)||(13321214-13321248)
chr7 (79-120)||(9723946-9723987)
chr7 (201-238)||(13911038-13911075)
chr7 (79-120)||(46474068-46474109)
[»] scaffold0023 (2 HSPs)
scaffold0023 (11-203)||(36093-36285)
scaffold0023 (11-203)||(48598-48789)
[»] chr2 (16 HSPs)
chr2 (11-238)||(19886675-19886913)
chr2 (11-203)||(17396724-17396916)
chr2 (11-203)||(19794776-19794967)
chr2 (11-203)||(24341461-24341652)
chr2 (16-201)||(462743-462927)
chr2 (11-201)||(36982515-36982704)
chr2 (11-203)||(7507916-7508107)
chr2 (11-203)||(20627385-20627576)
chr2 (11-203)||(43643029-43643220)
chr2 (11-203)||(8891242-8891433)
chr2 (11-203)||(25265462-25265653)
chr2 (128-203)||(19689473-19689548)
chr2 (128-203)||(23820187-23820262)
chr2 (128-203)||(14906512-14906587)
chr2 (128-202)||(20015127-20015201)
chr2 (79-120)||(16292940-16292981)
[»] scaffold0026 (2 HSPs)
scaffold0026 (11-203)||(64588-64780)
scaffold0026 (11-203)||(107747-107938)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-203)||(31735-31928)
scaffold0008 (11-201)||(128243-128431)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-238)||(35-273)
[»] chr1 (18 HSPs)
chr1 (11-238)||(18601132-18601370)
chr1 (11-203)||(5072448-5072640)
chr1 (11-203)||(22227809-22228000)
chr1 (11-203)||(22232506-22232697)
chr1 (11-201)||(20931345-20931534)
chr1 (11-201)||(20913037-20913219)
chr1 (11-203)||(41394222-41394413)
chr1 (15-203)||(2116258-2116446)
chr1 (11-203)||(20893698-20893889)
chr1 (11-203)||(20445679-20445870)
chr1 (11-203)||(20531444-20531635)
chr1 (77-203)||(45051489-45051614)
chr1 (11-203)||(37844522-37844714)
chr1 (128-203)||(51452608-51452683)
chr1 (199-233)||(2116453-2116487)
chr1 (201-238)||(5072402-5072439)
chr1 (79-120)||(25093926-25093967)
chr1 (15-55)||(45051446-45051486)
[»] scaffold0139 (3 HSPs)
scaffold0139 (11-203)||(21176-21367)
scaffold0139 (11-203)||(14121-14312)
scaffold0139 (199-238)||(14075-14114)
[»] scaffold0772 (1 HSPs)
scaffold0772 (35-203)||(5552-5720)
[»] scaffold0498 (1 HSPs)
scaffold0498 (11-201)||(8878-9067)
[»] scaffold0266 (2 HSPs)
scaffold0266 (11-203)||(1124-1315)
scaffold0266 (13-203)||(3654-3843)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-203)||(5276-5466)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-203)||(3722-3914)
[»] scaffold0049 (1 HSPs)
scaffold0049 (11-203)||(48187-48378)
[»] scaffold0302 (1 HSPs)
scaffold0302 (11-203)||(12115-12304)
[»] scaffold0413 (1 HSPs)
scaffold0413 (11-203)||(6136-6326)
[»] scaffold0175 (1 HSPs)
scaffold0175 (11-203)||(1028-1218)
[»] scaffold0025 (2 HSPs)
scaffold0025 (11-201)||(148721-148910)
scaffold0025 (11-203)||(8849-9040)
[»] scaffold0195 (2 HSPs)
scaffold0195 (11-201)||(19206-19395)
scaffold0195 (11-201)||(21290-21479)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-199)||(36989-37176)
[»] scaffold0215 (2 HSPs)
scaffold0215 (15-236)||(9365-9596)
scaffold0215 (15-236)||(16263-16494)
[»] scaffold0218 (1 HSPs)
scaffold0218 (11-201)||(5135-5324)
[»] scaffold0529 (1 HSPs)
scaffold0529 (15-238)||(2966-3200)
[»] scaffold0011 (1 HSPs)
scaffold0011 (11-203)||(123236-123427)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-201)||(26489-26678)
scaffold0162 (11-203)||(8252-8440)
[»] scaffold0075 (1 HSPs)
scaffold0075 (11-203)||(34532-34724)
[»] scaffold0001 (2 HSPs)
scaffold0001 (22-203)||(171916-172096)
scaffold0001 (22-203)||(177619-177799)
[»] scaffold0125 (2 HSPs)
scaffold0125 (11-203)||(41648-41839)
scaffold0125 (199-233)||(41846-41880)
[»] scaffold0104 (1 HSPs)
scaffold0104 (11-117)||(48514-48620)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-203)||(272031-272216)
scaffold0009 (79-120)||(69524-69565)
[»] scaffold0012 (1 HSPs)
scaffold0012 (22-203)||(247514-247694)
[»] scaffold1711 (1 HSPs)
scaffold1711 (117-238)||(1318-1450)
[»] scaffold1560 (1 HSPs)
scaffold1560 (11-117)||(9-115)
[»] scaffold0106 (1 HSPs)
scaffold0106 (15-200)||(41733-41917)
[»] scaffold0132 (1 HSPs)
scaffold0132 (11-203)||(13506-13697)
[»] scaffold1542 (1 HSPs)
scaffold1542 (11-203)||(606-797)
[»] scaffold0622 (1 HSPs)
scaffold0622 (11-100)||(9382-9471)
[»] scaffold0420 (1 HSPs)
scaffold0420 (107-203)||(13385-13480)
[»] scaffold0078 (1 HSPs)
scaffold0078 (11-203)||(37138-37328)
[»] scaffold0018 (1 HSPs)
scaffold0018 (129-201)||(51256-51328)
[»] scaffold0066 (2 HSPs)
scaffold0066 (79-203)||(45098-45222)
scaffold0066 (79-203)||(54484-54608)
[»] scaffold0084 (1 HSPs)
scaffold0084 (79-203)||(56171-56295)
[»] scaffold0028 (1 HSPs)
scaffold0028 (129-203)||(89526-89600)
[»] scaffold0361 (2 HSPs)
scaffold0361 (79-203)||(3257-3381)
scaffold0361 (13-67)||(3210-3264)
[»] scaffold0151 (1 HSPs)
scaffold0151 (79-199)||(22483-22602)
[»] scaffold0141 (2 HSPs)
scaffold0141 (128-203)||(22656-22731)
scaffold0141 (128-203)||(26911-26986)
[»] scaffold0124 (1 HSPs)
scaffold0124 (128-203)||(1654-1729)
[»] scaffold0006 (1 HSPs)
scaffold0006 (79-126)||(197386-197433)


Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 10644219 - 10644457
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10644219 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 10644318  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------a 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           |    
T  10644319 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta 10644418  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10644419 tcatcaattcatgcatacaaacataacatcacagcaaga 10644457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 47357654 - 47357892
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  47357654 catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 47357753  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  47357754 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 47357853  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||| ||||| ||||||||||||||||||||||||    
T  47357854 acatcaatccatgcatacaaacataacatcacagcaaga 47357892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 13048477 - 13048293
Alignment:
Q  19 atccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaaca 118  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||||| | |||||||||||||  |||||||    
T  13048477 atccatgaatatgcaaacccaagcaattattcattaatcatattatctaataacattcataacatcatttgaacaagcatcacatctcaaactaacaaca 13048378  T
Q  119 acttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||||| ||||| ||||||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  13048377 acttaggagaaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcat 13048293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 15675352 - 15675161
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  15675252 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 15675161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 31115629 - 31115820
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||||| ||||||||||||| |||| |||  ||| ||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  31115729 caacaacaacttagga-aaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcat 31115820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 13246430 - 13246621
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||      
T  13246430 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 13246529  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  13246530 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 13246621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 54118507 - 54118316
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||   ||||||||||||||||| |||||| | || ||||    
T  54118507 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataact-aaat 54118409  T
Q  111 c-aacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    | ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| || || | | |||||||||||||||||||||||||||||||    
T  54118408 ctaacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcat 54118316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 10104445 - 10104322
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttg 178  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||    
T  10104445 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattg 10104347  T
Q  179 aacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||||||||||||||    
T  10104346 aacatgtaatttcaccaacaatcat 10104322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 26680201 - 26680391
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  26680201 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 26680300  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| ||||| |  |  ||||||| | |||| |||||||  |||||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  26680301 caactacaacat--gtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcat 26680391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 121990 - 122078
Alignment:
Q  112 aacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  121990 aacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 122078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 40885749 - 40885630
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||| | || |||||||||| |||| |||  ||||||||| |||||| |||||| |||    
T  40885749 aacatcaattgaacatgaatcatatctcaattcaacaataacttagca-aagttcaccaattgagcataat-ttcataacttgacatttatacatacttt 40885652  T
Q  178 gaacatgtaatttcaccaacaa 199  Q
    ||||||||||||||||||||||    
T  40885651 gaacatgtaatttcaccaacaa 40885630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 111395 - 111484
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 100  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| ||||||    
T  111395 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatca 111484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 8374576 - 8374696
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  |||||||||||||||| |||||| |||    
T  8374576 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactaattgagtataat-ttcataacttaacatttatacatacttt 8374673  T
Q  178 gaa-catgtaatttcaccaacaa 199  Q
    ||| |||||||||||||| ||||    
T  8374674 gaagcatgtaatttcacccacaa 8374696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 17145845 - 17145725
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  ||| |||||||||||| |||||| |||    
T  17145845 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcactaattgagtataat-ttcacaacttaacatttatacatacttt 17145748  T
Q  178 g-aacatgtaatttcaccaacaa 199  Q
    | |||||||||||||||| ||||    
T  17145747 gaaacatgtaatttcacccacaa 17145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 10104494 - 10104450
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaa 55  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  10104494 catcatcaattcatgaatatgtatacccaagcaatgattcatcaa 10104450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 10488678 - 10488753
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  10488678 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 10488753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 16328073 - 16327998
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  16328073 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 16327998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 18248286 - 18248399
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| |||| || | |||  ||||| |||||||||| |||||| |||    
T  18248286 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactaattgagtataat-ttcatatcttaacatttatacatacttt 18248383  T
Q  178 g-aacatgtaatttca 192  Q
    | ||||||||||||||    
T  18248384 gaaacatgtaatttca 18248399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 13590254 - 13590213
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  13590254 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 13590213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 7850090 - 7850190
Alignment:
Q  102 atctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    ||||||| |||||||  |||||| | || |||| || || ||||||||  ||||||||| ||||||| ||||| ||| ||||  |||| |||||||||||    
T  7850090 atctcaattcaacaatcacttagcaaaatttcatcacttgagcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatc 7850189  T
Q  202 a 202  Q
    |    
T  7850190 a 7850190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 18276501 - 18276541
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaa 119  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  18276501 aacatcaattgaacatgaatctcatcacaattcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 16821139 - 16821377
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16821139 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 16821238  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat------- 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||           
T  16821239 caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta 16821338  T
Q  204 ----caattcatgcctacaaacataacatcacagcaaga 238  Q
        ||||| |||| ||||||||||||||||||||||||    
T  16821339 tcatcaatttatgcatacaaacataacatcacagcaaga 16821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 55316219 - 55316457
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  55316219 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 55316318  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  55316319 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 55316418  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  55316419 acatcaattcatgcatacaaacataacatcacagcaaga 55316457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 41270075 - 41270313
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  41270075 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 41270174  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||| ||||||||||              
T  41270175 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaacta 41270274  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  41270275 acatcaattcatgcatacaaacataacatcacagcaaga 41270313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13975985 - 13975793
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  13975985 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 13975886  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||  ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  13975885 taatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcat 13975793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 45860805 - 45860997
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  45860805 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 45860904  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||  ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||||    
T  45860905 taatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcat 45860997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 14842824 - 14842633
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  14842824 catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 14842725  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  14842724 taacaacaacttagca-aaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcat 14842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13955153 - 13954961
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  13955153 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 13955054  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||  ||||||||||||||||||| ||||| ||||||||| |||||||| | ||||||||| ||||| ||||||||||| |||||||||||||    
T  13955053 taatgacaacttaggagaaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcat 13954961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 15936890 - 15936699
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  15936890 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 15936791  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  15936790 taacaacaacttatca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcat 15936699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 15938729 - 15938541
Alignment:
Q  14 catcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaa 113  Q
    ||||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| ||    
T  15938729 catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa 15938630  T
Q  114 caacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  15938629 caacaacttatca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcat 15938541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 15859287 - 15859096
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | ||||| |    
T  15859287 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt 15859188  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | |||||||||||||||||||||||||||||||||    
T  15859187 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcat 15859096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 51158282 - 51158090
Alignment:
Q  10 acatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||     
T  51158282 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat 51158183  T
Q  110 tcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
      ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  51158182 ctaacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 51158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 2049810 - 2049999
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||| |||||||||||||  ||||| |||||||||    
T  2049810 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat 2049909  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| || ||| ||| |||||||||||||||||||||||||||||||||||    
T  2049910 taacaacaacttagca-aaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatc 2049999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 12030410 - 12030221
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||  |||| ||||||||||||| |||||| || ||||||    
T  12030410 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat 12030311  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||| ||||||| | ||||||||||||| |||||||   ||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  12030310 taacaataacttagca-aaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatc 12030221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 15614838 - 15615023
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||| ||||| |||    
T  15614838 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 15614937  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    || ||||||| | ||||||||||||| ||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  15614938 aataacttagca-aaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 15615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 13838905 - 13839085
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    ||||||||||||||||||| |||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||  |||| ||||||    
T  13838905 catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact 13839004  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  13839005 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 13839085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 17912744 - 17912554
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||| | |||||||||  | || ||||| |||||   |||||||| ||||||||||||||| | ||||| |    
T  17912744 catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt 17912645  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| ||||| ||    ||||||| |||||| |||||||  |||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  17912644 caactacaacata--tcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcat 17912554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 47984650 - 47984763
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||      
T  47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
Q  111 caacaacaacttag 124  Q
    ||||||||||||||    
T  47984750 caacaacaacttag 47984763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 47993937 - 47994050
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||      
T  47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
Q  111 caacaacaacttag 124  Q
    ||||||||||||||    
T  47994037 caacaacaacttag 47994050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 48003224 - 48003337
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||      
T  48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
Q  111 caacaacaacttag 124  Q
    ||||||||||||||    
T  48003324 caacaacaacttag 48003337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 48012510 - 48012623
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||  || |||||||||  | || ||||| |||||   | ||||||||||||||||||||||||||||||      
T  48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
Q  111 caacaacaacttag 124  Q
    ||||||||||||||    
T  48012610 caacaacaacttag 48012623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 16744377 - 16744187
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||  | || ||  | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  16744377 catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt 16744278  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| | ||| |  |  ||||||| | |||| |||||||  |||||||||  ||||||||||||||| || ||||||||| ||||||||||||    
T  16744277 caactataacat--gtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcat 16744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 12264981 - 12264860
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || |||| ||||| || | ||| ||||||||||||||||| |||||| |||    
T  12264981 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataat-ctcataacttaacatttatacatacttt 12264883  T
Q  178 g-aacatgtaatttcaccaacaa 199  Q
    | |||||||||||||||| ||||    
T  12264882 gaaacatgtaatttcacccacaa 12264860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 15468596 - 15468500
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctca 107  Q
    |||||||||| |||||||||||||||||||||||| ||||||  |  |||| ||||  ||||| | | ||||||||| ||| |||||| ||||||||    
T  15468596 catcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctca 15468500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 22275209 - 22275305
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctca 107  Q
    |||||||||| |||||||||||||||| ||||||| ||||||  |  |||| ||||  ||||| | | ||||||||| ||| |||||| ||||||||    
T  22275209 catcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctca 22275305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 2449385 - 2449310
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  2449385 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 2449310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 11986362 - 11986238
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata--tt 176  Q
    ||||||||| ||||||||||||||| ||   ||||||||||||||| | |||||||| | || ||||||||  ||||||||| |||||  ||||||  ||    
T  11986362 aacatcaatggaacatgaatcacatatcttttcaacaacaacttagca-aaattcactatttgagcacaat-ttcataacttgacattaatacatacttt 11986265  T
Q  177 tgaacatgtaatttcaccaacaatcat 203  Q
      |||||||||||||| | ||||||||    
T  11986264 aaaacatgtaatttcaaccacaatcat 11986238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 54651529 - 54651649
Alignment:
Q  83 tcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-tttg-aa 180  Q
    ||||| |||||||||| ||||||||  ||||||||||| ||  | ||||||||||||| || | |||  |||||||||||||||| |||||| |||| ||    
T  54651529 tcaatggaacatgaattacatctcatttcaacaacaacatatca-aaattcaccaattgagtataat-ttcataacttaacatttatacatactttgcaa 54651626  T
Q  181 catgtaatttcaccaacaatcat 203  Q
    |||| ||||||||  ||||||||    
T  54651627 catgcaatttcactcacaatcat 54651649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 11638424 - 11638465
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  11638424 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 11638465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 15876135 - 15876179
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaactta 123  Q
    |||||||||||||||||||||  ||| ||| ||||||||||||||    
T  15876135 aacatcaattgaacatgaatcttatcacaattcaacaacaactta 15876179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 16880188 - 16880256
Alignment:
Q  77 ataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagca 145  Q
    |||||||||||||||||||||||  ||| ||| ||||||||||| ||| | || ||||| |||| ||||    
T  16880188 ataacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagca 16880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 42997 - 43189
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  42997 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat 43096  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43097 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 43189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 30120722 - 30120960
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30120722 catcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 30120821  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatc------ 204  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||           
T  30120822 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 30120921  T
Q  205 -----aattcatgcctacaaacataacatcacagcaaga 238  Q
         ||||||||| ||||||||||||||||||||||||    
T  30120922 acataaattcatgcatacaaacataacatcacagcaaga 30120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  222943 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 222844  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  222843 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  736566 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 736467  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  736466 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  860461 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 860362  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  860361 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 21844824 - 21844586
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  21844824 catcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaaaaatcacatctcaaat 21844725  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa----------- 199  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||               
T  21844724 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatca 21844625  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21844624 tcatcaattcatgcatacaaacataacatcacagcaaga 21844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 21852217 - 21851979
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21852217 catcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacatctcaaat 21852118  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa----------- 199  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||               
T  21852117 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatca 21852018  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21852017 tcatcaattcatgcatacaaacataacatcacagcaaga 21851979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 16674644 - 16674452
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  16674644 catcatcaatccatgaatatgcaaactcaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 16674545  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  16674544 taacaacaacttaggagaaattcaccaattaagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcat 16674452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 43373731 - 43373540
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || || ||||| |||||  |||| ||||||||||||| |||||| |||||||||    
T  43373731 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat 43373632  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  43373631 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 43373540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 16193980 - 16193788
Alignment:
Q  10 acatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaa 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| ||||||||    
T  16193980 acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa 16193881  T
Q  110 tcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    | |||||||| || ||  ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16193880 ttaacaacaa-tttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcat 16193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 6774505 - 6774318
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| ||||||||| |||    
T  6774505 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 6774406  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    || ||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  6774405 aataacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 6774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 24548986 - 24549219
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||| ||||| |||    
T  24548986 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac 24549085  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca-----------t 203  Q
    || ||||||| | ||||||||||||| ||||| ||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||           |    
T  24549086 aataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 24549184  T
Q  204 caattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||| ||||||||||||||||||| ||||    
T  24549185 caattcatgcatacaaacataacatcacagtaaga 24549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 24929043 - 24928863
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||||| |||||||||||| || ||||| |||||  |||||| ||||||||||| ||  || | |||||  |||| ||||||    
T  24929043 catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact 24928944  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||  |||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  24928943 tagc-gaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 24928863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 16405235 - 16405047
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||| |||||||||||||| | |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| || |||| |    
T  16405235 catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt 16405136  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||   |||| | ||||||||||||| ||||||||  ||| |||||||||||| | | |||||||||||||||||||||||||||||||    
T  16405135 taacaac---ttagca-aaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcat 16405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 17345581 - 17345760
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||| | |||||||||  | || ||||| |||||   |||| ||||| |||||| |||||| | ||||| ||| ||| ||||    
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact 17345679  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  17345680 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcat 17345760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 22907476 - 22907286
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  22907476 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 22907377  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| |||||  | |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  22907376 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 22907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 691970 - 691909
Alignment:
Q  139 tttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 200  Q
    |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  691970 tttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 16195298 - 16195419
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || ||||  |||| || | ||| ||||||||||||||||| |||||| |||    
T  16195298 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcataaattaagtataat-ctcataacttaacatttatacatacttt 16195396  T
Q  178 g-aacatgtaatttcaccaacaa 199  Q
    | |||||||||||||||| ||||    
T  16195397 gaaacatgtaatttcacccacaa 16195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 5238203 - 5238278
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  5238203 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 5238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 24661395 - 24661320
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  24661395 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 24661320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 43685662 - 43685737
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  43685662 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 43685737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 6774311 - 6774272
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  6774311 atcatcaattcatgcatacaaacataacatcacagtaaga 6774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 5854681 - 5854722
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  5854681 aacatcaattgaacatgaatctcatcacaattcaacaacaac 5854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 22497389 - 22497348
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  22497389 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 22497348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 38533716 - 38533757
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  38533716 aacatcaattgaacatgaatctcatcacaattcaacaacaac 38533757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 25175563 - 25175801
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  25175563 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25175662  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  25175663 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25175762  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||| ||||||||||    
T  25175763 acatcaattcatgcatacaaacataacaacacagcaaga 25175801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 27654235 - 27653997
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  27654235 catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat 27654136  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  27654135 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 27654036  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||| ||||||||||||||||||    
T  27654035 acatcaattcatgcatacaagcataacatcacagcaaga 27653997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 16826006 - 16825766
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||    
T  16826006 catcatcaatccatgaatatgcataacaaagcaattattcatcaatcataatatcagataacattcataacatcatttgaacaagaatcacaactcaaat 16825907  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     |||||||| ||||||||||| |||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  16825906 taacaacaaattaggagaaatccaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaac 16825807  T
Q  201 ---catcaattcatgcctacaaacataacatcacagcaaga 238  Q
       ||||||||||||| ||||||||||||||||||||||||    
T  16825806 taacatcaattcatgcatacaaacataacatcacagcaaga 16825766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 14626377 - 14626144
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| ||||||| | |||    
T  14626377 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac 14626278  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------atcat 203  Q
    |||||||||| |  ||||||||||||   ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||           |||||    
T  14626277 aacaacttagca-taattcaccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 14626179  T
Q  204 caattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  14626178 caattcatgcatacaaacataacatcacagcaaga 14626144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 1650352 - 1650165
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| ||||||||| |||    
T  1650352 atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac 1650253  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     | ||||||| | ||||||||||||| ||||||||  ||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  1650252 cataacttagca-aaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcat 1650165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 35009702 - 35009511
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |    
T  35009702 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 35009603  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35009602 caacaacaacatagca-aaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 35009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 23153458 - 23153638
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||| ||||||||| ||| ||||||||| || || ||||| |||||  ||||| |||||||||||| |||||| | |||||   ||||||||||    
T  23153458 catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact 23153557  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  23153558 tagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 23153638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 1657999 - 1657820
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||| | |||||||||  | || ||||| |||||   |||||||||| |||||| |||||| | ||||| ||| ||| ||||    
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact 1657901  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  1657900 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcat 1657820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 27740838 - 27741021
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||| | || ||||||| |  | || |||| |||| |   |  ||||||||||||||||||||| ||||||| |    
T  27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatattt--gaacatgtaatttcacc 194  Q
    ||||||| |||||| | ||||||||||||| ||||||||  ||||||||| |||||| |||||| ||   ||||||||||||||||    
T  27740938 caacaacgacttagca-aaattcaccaattgagcacaat-ttcataacttgacatttatacatacttcgaaacatgtaatttcacc 27741021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 29665941 - 29666065
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||| | ||||||||||||| || |||||  ||||||||| |||||| | |||| |||    
T  29665941 aacatcaattgaacatgaatcatatctcatttcaacaacaacttagca-aaattcaccaattgagtacaat-ttcataacttgacatttatgcatacttt 29666038  T
Q  178 g-aacatgtaatttcaccaacaatcat 203  Q
    | |||||||||||||||| ||||||||    
T  29666039 gaaacatgtaatttcacccacaatcat 29666065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 15862484 - 15862662
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||| | |||||||||  | || ||||| || ||   ||||||| ||| ||||| |||||| | ||||| ||| ||| ||||    
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact 15862581  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | |||| || ||||| ||||||||  ||||||||| |||||| |||||| |||||||||| |||||||||||||||||    
T  15862582 tagca-aaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcat 15862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 15862669 - 15862703
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacag 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  15862669 atcatcaattcatgcatacaaacataacatcacag 15862703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 18399005 - 18399046
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  18399005 aacatcaattgaacatgaatctcatcacaattcaacaacaac 18399046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 27751624 - 27751656
Alignment:
Q  200 tcatcaattcatgcctacaaacataacatcaca 232  Q
    |||||||||||||| ||||||||||||||||||    
T  27751624 tcatcaattcatgcatacaaacataacatcaca 27751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 18778244 - 18778006
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||    
T  18778244 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat 18778145  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  18778144 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 18778045  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  18778044 acatcaattcatgcatacaaacataacatcacagcaaga 18778006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 22366733 - 22366495
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||    
T  22366733 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat 22366634  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  22366633 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 22366534  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  22366533 acatcaattcatgcatacaaacataacatcacagcaaga 22366495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 25426628 - 25426866
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  25426628 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 25426727  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     |||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  25426728 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 25426827  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  25426828 acatcaattcatgcatacaaacataacatcacagcaaga 25426866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 43443647 - 43443409
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  43443647 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaaat 43443548  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  43443547 caacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 43443448  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  43443447 acatcaattcatgcatacaaacataacatcacagcaaga 43443409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 12374 - 12612
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  12374 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 12473  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     |||||||||||||||||||||||||| |||||||||||  |||||||||| || |||| ||||| ||||||||||||||||||||||||              
T  12474 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 12573  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  12574 acatcaattcatgcatacaaacataacatcacagcaaga 12612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 4200237 - 4200045
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200237 catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 4200138  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| || ||||||||||||||||||||| |||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  4200137 caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcat 4200045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 19499899 - 19500137
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  19499899 catcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19499998  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     |||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  19499999 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19500098  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  19500099 acatcaattcatgcatacaaacataacatcacagcaaga 19500137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 27009841 - 27010079
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  27009841 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 27009940  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------a 199  Q
     ||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||           |    
T  27009941 taacaacaacttaggagaaattcaccaattgagtacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatca 27010040  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27010041 tcatcaattcatgcatacaaacataacatcacagcaaga 27010079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 21073847 - 21073609
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  21073847 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat 21073748  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||| |||||||||||| |||||||||||  |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  21073747 taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta 21073648  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     |||| |||||||| ||||||||||||||||||||||||    
T  21073647 acatccattcatgcatacaaacataacatcacagcaaga 21073609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 23506965 - 23507156
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| |||||||||    
T  23506965 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 23507064  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23507065 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 23507156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 22054096 - 22053905
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| | ||||||||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22053996 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 22053905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 18531330 - 18531139
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| |||||| |||||| |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| | ||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18531230 caacaacaacttagca-aaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 18531139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 27182810 - 27182619
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||      
T  27182810 catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc 27182711  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||| ||||||||||    
T  27182710 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcat 27182619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 29188483 - 29188344
Alignment:
Q  63 atcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaa 162  Q
    ||||| |||||  ||||||||||||||| || |||||| ||||||||| ||||| ||||||| | ||||||||||||| ||||| ||  ||| ||||||     
T  29188483 atcaattaacaaccataacatcaattgagcaagaatcaaatctcaaattaacaataacttagca-aaattcaccaattgagcaccattttcacaacttat 29188385  T
Q  163 catttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29188384 catttttacatatttgaacatgtaatttcaccaacaatcat 29188344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 34939289 - 34939468
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||| | |||||||||  | || ||||| |||||   |||||||||| |||||| |||||| | ||||| ||| |||  |||    
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact 34939387  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | |||| || ||||| ||||||||  ||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  34939388 tagca-aaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcat 34939468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 193
Target Start/End: Complemental strand, 35791287 - 35791172
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | || |||| ||||| || | ||| ||||||||||||||||| |||||| |||    
T  35791287 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaatttcatcaattaagtataat-ctcataacttaacatttatacatacttt 35791189  T
Q  178 g-aacatgtaatttcac 193  Q
    | |||||||||||||||    
T  35791188 gaaacatgtaatttcac 35791172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 20623085 - 20623160
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  20623085 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 20623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 21233675 - 21233600
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  21233675 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 21233600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 29190522 - 29190482
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaa 55  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  29190522 atcaattcatgaatatgcatacccaagcaatgattcatcaa 29190482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 16536313 - 16536388
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  16536313 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 16536388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 29188337 - 29188298
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  29188337 atcatcaattcatgcatacaaacataacatcacagtaaga 29188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 32950761 - 32950886
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataac-ttaacatttttacata-tt 176  Q
    ||||||||| ||||||||||||||||||   ||||||||||| ||| | |||||||||| || ||||||||  ||||||| || || ||| |||||| ||    
T  32950761 aacatcaatggaacatgaatcacatctcttttcaacaacaacatagta-aaattcaccatttgagcacaat-ttcataactttgacctttatacatactt 32950858  T
Q  177 tg-aacatgtaatttcaccaacaatcat 203  Q
    || |||||||||||||| | ||||||||    
T  32950859 tgaaacatgtaatttcaaccacaatcat 32950886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 11212253 - 11212133
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | |||||||| | || || | |||  |||||||||||||||| |||| | |||    
T  11212253 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatta-aaattcactacttgagtataat-ttcataacttaacatttatacacacttt 11212156  T
Q  178 g-aacatgtaatttcaccaacaa 199  Q
    | |||||||||||||||| ||||    
T  11212155 gaaacatgtaatttcacccacaa 11212133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 17471844 - 17471750
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatct 105  Q
    |||||||||| ||||||||||| |||||||||||| ||||||  |  |||| ||||  ||||| | | ||||||||| ||| |||||| ||||||    
T  17471844 catcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatct 17471750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 34939475 - 34939509
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacag 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  34939475 atcatcaattcatgcatacaaacataacatcacag 34939509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 4200036 - 4199999
Alignment:
Q  201 catcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  4200036 catcaattcatgcatacaaacataacatcacaacaaga 4199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 21617083 - 21617124
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  21617083 aacatcaattgaacatgaatctcatcacaattcaacaacaac 21617124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13911277 - 13911084
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13911277 catcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 13911178  T
Q  111 caacaacaac-ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| |||||||||||||||||||| |||| |||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  13911177 caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcat 13911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 13572676 - 13572914
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  13572676 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 13572775  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------a 199  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||           |    
T  13572776 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatca 13572875  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13572876 tcatcaattcatgcatacaaacataacatcacagcaaga 13572914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 10989410 - 10989647
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  10989410 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 10989509  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
      |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  10989510 -tacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 10989608  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  10989609 acatcaattcatgcatacaaacataacatcacagcaaga 10989647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 2437457 - 2437695
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||    
T  2437457 catcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcaaatctcatat 2437556  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat------- 203  Q
     ||||||||||||||| ||||||||||||| | ||||||  |||||||||| ||||||| ||||| |||||||||||||||||||||||||||           
T  2437557 taacaacaacttaggaaaaattcaccaattgaacacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 2437656  T
Q  204 ----caattcatgcctacaaacataacatcacagcaaga 238  Q
        |||||||||| |||||||||||||||||| |||||    
T  2437657 acatcaattcatgcatacaaacataacatcacaacaaga 2437695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 18254098 - 18253907
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  18254098 catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 18253999  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  18253998 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcat 18253907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 25292595 - 25292410
Alignment:
Q  17 caatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaa 116  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||| |    
T  25292595 caatccatgaatatgcaaacccaagcaattattcattagtcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacga 25292496  T
Q  117 caacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| |||||| |||||||||||| ||||||||| ||||| |||| | ||||||||||||| |||||||||||||||||||||||||    
T  25292495 caacctaggag-aattcaccaattgagcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcat 25292410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 36052667 - 36052855
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || || ||||| |||||  || ||||||||||||||| |||||| |||||||||    
T  36052667 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat 36052766  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||   |||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  36052767 taacaac---ttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcat 36052855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 16479213 - 16479022
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  | || |||||||||||   |||||||||||||| || |||||| |||||||||    
T  16479213 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat 16479114  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     || || ||||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16479113 taaaaataacttaaca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 16479022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 16211768 - 16211955
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatca 112  Q
    |||| ||| |||||||||||||||||||||||| | ||||||| || || ||||| |||||  ||||||||||||| |||| |||||| ||||||||| |    
T  16211768 tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta 16211867  T
Q  113 acaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    |||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||| |||||||| |||||||    
T  16211868 acaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatc 16211955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 47481294 - 47481103
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  | || ||||| ||| |   ||||||||||||||||| |||||| | ||||| |    
T  47481294 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt 47481195  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| | ||||||  ||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  47481194 caacaacaacttagca-aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcat 47481103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 3059966 - 3060152
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| | |||||      
T  3059966 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc 3060065  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca 198  Q
     ||||||||||||  | |||||||||| || |||| |||  ||| || ||| ||||||||||||||||||||||||||||||||||||    
T  3060066 taacaacaacttaaca-aaattcaccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaaca 3060152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 11580997 - 11580811
Alignment:
Q  16 tcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaaca 115  Q
    ||||| |||||||||| ||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||    
T  11580997 tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 11580898  T
Q  116 acaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  11580897 acaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 11580811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 13037277 - 13037086
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| ||| ||||||||||| ||||||||| |||||| | |||||      
T  13037277 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc 13037178  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||| ||||||| ||||||||||    
T  13037177 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcat 13037086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 13321014 - 13321207
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||| |||| |||||||  || |||||||||  | || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  13321014 catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 13321113  T
Q  111 caacaa-caacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-tttg-aacatgtaatttcaccaacaatcat 203  Q
    |||||| |||||||| | ||||||||||||| ||||||||  ||||||||| |||||| |||||| |||| |||||||||||||||||||||||||    
T  13321114 caacaatcaacttagca-aaattcaccaattgagcacaat-ttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcat 13321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 7293017 - 7293207
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | ||||| |    
T  7293017 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt 7293116  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||||||  | |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  7293117 caacaacaac--atgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 7293207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 11516343 - 11516418
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  11516343 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 11516418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 15441711 - 15441636
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  15441711 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 15441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 30262276 - 30262201
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  30262276 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 30262201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 296224 - 296038
Alignment:
Q  14 catcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaa 113  Q
    |||||||||||||||| |||||||||| || | |||||||||    || ||||| ||| |   | |||||||||||||||||||||||| | ||| ||||    
T  296224 catcaatccatgaataagcatacccaatcagtaattcatcaac---aacatcaattaatagcaacaacatcaattgaacatgaatcacaacacaattcaa 296128  T
Q  114 -caacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     || ||| |||| | |||||||||| ||    | |||  | |||||||  |||||||||||| || |||||| ||||||||||||||||||    
T  296127 acatcaatttagca-aaattcaccatttggatataatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcat 296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 13321214 - 13321248
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacag 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  13321214 atcatcaattcatgcatacaaacataacatcacag 13321248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 9723987 - 9723946
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  9723987 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 9723946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 13911075 - 13911038
Alignment:
Q  201 catcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  13911075 catcaattcatgcatacaaacataacatcacaacaaga 13911038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 46474068 - 46474109
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  46474068 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 46474109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 36093 - 36285
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36093 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatctcaaat 36192  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  36193 taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcat 36285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 48598 - 48789
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| ||| |  |||||||||||||||||| |||||| | |||||      
T  48598 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 48697  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     | ||||||||||| | ||||||||||| | ||||||||  ||| |||||| ||||||| | |||||||||||||||||||||||||||||||    
T  48698 tagcaacaacttagca-aaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcat 48789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 19886913 - 19886675
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  19886913 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat 19886814  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     |||||||||||||||||||||||||| |||||||||||  |||||||||| || |||| ||||| ||||||||||||||||||||||||              
T  19886813 taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta 19886714  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  19886713 acatcaattcatgcatacaaacataacatcacagcaaga 19886675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 17396916 - 17396724
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  17396916 catcaacaatccatgaatatgcaaacccaagcaattatccattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 17396817  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||  ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  17396816 taatgacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcat 17396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 19794967 - 19794776
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  |||| ||||| ||||    ||||||||||||||||| |||||| | ||||| |    
T  19794967 catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt 19794868  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  19794867 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 19794776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 24341652 - 24341461
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    || ||||| |||||   |||||||||||||||||||||||| ||||||| |    
T  24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  24341552 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcat 24341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 462743 - 462927
Alignment:
Q  16 tcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaaca 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||  | ||||| |||||  |||||||||||||||||| |||||| | |||||   ||||    
T  462743 tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca 462842  T
Q  116 acaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    ||||||||| | ||||||||||||| | ||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  462843 acaacttagca-aaattcaccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 462927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 36982704 - 36982515
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| |    
T  36982704 catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt 36982605  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    |||||||||||| ||  ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  36982604 caacaacaactt-ggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatc 36982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 7508107 - 7507916
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaa-catgaatcacatctcaaa 109  Q
    ||||||||||||||||||||||||||||||||| | |||||||||  | || |||||||||||   |||||||||||| || ||||||||| |||||||     
T  7508107 catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T
Q  110 tcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    | |||||||||||||   ||||||||||||| | ||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  7508007 t-aacaacaacttagcc-aaattcaccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcat 7507916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 20627576 - 20627385
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| ||||||||| |||||||||||||| ||||||||| || || | ||| |||||  ||||| |||||||||||| |||| | |||||||||    
T  20627576 catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat 20627477  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||  | ||||||||||||| ||||||||  ||| || ||| |||||||||||||||| ||||||||||||||||||||||||    
T  20627476 taacaacaacttaaca-aaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcat 20627385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 43643220 - 43643029
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||| | |||||||||  | || ||||| |||||   ||| ||||||||||||| |||||| |||||||||    
T  43643220 catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat 43643121  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     || ||||||| || | ||||||||||||| ||||||||  ||| |||||||||||| | | |||||||||||||||||||||||||||||||    
T  43643120 taataacaactaagaa-aaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcat 43643029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 8891242 - 8891433
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||| || || ||||| ||| |  |||||||||||||||||| |||||| | |||||      
T  8891242 catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc 8891341  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | ||||||||||||||||||| |||||||||||    
T  8891342 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcat 8891433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 25265653 - 25265462
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||| || |||||| ||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |    
T  25265653 catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 25265554  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25265553 caacaacaacatagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 25265462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 19689548 - 19689473
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  19689548 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 19689473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 23820187 - 23820262
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  23820187 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 23820262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 14906587 - 14906512
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  14906587 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 14906512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 20015127 - 20015201
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca 202  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| |||||||||||    
T  20015127 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatca 20015201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 16292981 - 16292940
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  16292981 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 16292940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 64780 - 64588
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  64780 catcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 64681  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  64680 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcat 64588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 107747 - 107938
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  107747 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 107846  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||  | ||||||||||||| ||||||||  | | |||||| ||||||| || ||||||||||||||||||||||||||||||    
T  107847 taacaacaacttatca-aaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcat 107938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 31928 - 31735
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31928 catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatctcaaat 31829  T
Q  111 caacaacaac-ttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| |||||||||||||||||||| |||| |||| |||||||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  31828 caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcat 31735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 128431 - 128243
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| || ||| | |||||| |||||||||||||||||| |||||| ||||| |||    
T  128431 catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctc-aat 128333  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||| ||  | |||||| |||||| ||||||||  ||| |||||||||  |||||| ||||||||||||||||||||||||||||    
T  128332 taacaacaacctaaca-aaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatc 128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 35 - 273
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  35 catcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatcacatctcaaat 134  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaaca-----------a 199  Q
     ||||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||           |    
T  135 taacaacaacttaggagaaattcaccaattgagcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatca 234  T
Q  200 tcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  235 tcatcaattcatgcatacaaacataacatcacagcaaga 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 18601370 - 18601132
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  18601370 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 18601271  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat---------- 200  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||              
T  18601270 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta 18601171  T
Q  201 -catcaattcatgcctacaaacataacatcacagcaaga 238  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  18601170 acatcaattcatgcatacaaacataacatcacagcaaga 18601132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 5072640 - 5072448
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||| |    
T  5072640 catcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaact 5072541  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  5072540 taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcat 5072448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 22227809 - 22228000
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  22227809 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22227908  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||| |||||   ||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22227909 taacaacaacttagca-aaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcat 22228000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 22232506 - 22232697
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  22232506 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 22232605  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||| |||||   ||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22232606 taacaacaacttagca-aaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcat 22232697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 20931345 - 20931534
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| |||||||||    
T  20931345 catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 20931444  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     |||||||| |||| | ||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20931445 taacaacaatttagca-aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatc 20931534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 20913037 - 20913219
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || || ||||| |||||  |||||||||||||||||| |||       ||||||    
T  20913037 catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaa-------tcaaat 20913129  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||| | | ||||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20913130 taacaacaactttgca-aaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatc 20913219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 41394222 - 41394413
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||||||||||||||||||||||| || | |||||||||  | || |||||||||||   |||||||||||||| || |||||| |||||||      
T  41394222 catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca 41394321  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||| ||||||| | ||||||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  41394322 taacaataacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcat 41394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 2116258 - 2116446
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcaca-tctcaaatcaa 113  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | |||||| ||    
T  2116258 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa 2116357  T
Q  114 caacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| ||||||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2116358 caataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 2116446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 20893889 - 20893698
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| |  ||||      
T  20893889 catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc 20893790  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||| ||||||||||    
T  20893789 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcat 20893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 20445679 - 20445870
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | ||| |    
T  20445679 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20445778  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  |||  ||||| ||||| | | || ||||||||||||||||||||||||||||    
T  20445779 caacaacaacttagca-aaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 20445870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 20531444 - 20531635
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  ||||||||||||||| || |||||| | | ||| |    
T  20531444 catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt 20531543  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  |||  ||||| ||||| | | || ||||||||||||||||||||||||||||    
T  20531544 caacaacaacttagca-aaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 20531635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 45051489 - 45051614
Alignment:
Q  77 ataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatt 176  Q
    |||||||||||||| || |||||| ||||||||| ||| | ||||||| | ||||||||||||| ||||||||  ||| |||||| ||||||||||||||    
T  45051489 ataacatcaattgagcaagaatcaaatctcaaattaaccataacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatt 45051587  T
Q  177 tgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||||||||||||||||    
T  45051588 tgaacatgtaatttcaccaacaatcat 45051614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 37844714 - 37844522
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| | ||||||| || || ||||| |||||  |||||||||||||||||| |||||| | |||||      
T  37844714 catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 37844615  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactca-taacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | |||||||  |||| ||||||||  ||| ||  ||| ||||| | | || ||||||||||||||||||||||||||||    
T  37844614 taacaacaacttagca-aaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcat 37844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 51452608 - 51452683
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| ||||||||||||    
T  51452608 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcat 51452683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 2116453 - 2116487
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacag 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  2116453 atcatcaattcatgcatacaaacataacatcacag 2116487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 5072439 - 5072402
Alignment:
Q  201 catcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||| || |||||||||||||||||||||    
T  5072439 catcaattcatgcatataaacataacatcacagcaaga 5072402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 25093926 - 25093967
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    |||||||||| |||||||||| |||| |||||||||||||||    
T  25093926 aacatcaattaaacatgaatctcatcacaaatcaacaacaac 25093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 45051446 - 45051486
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaa 55  Q
    |||||| |||||||||||||||||||||| | |||||||||    
T  45051446 atcaattcatgaatatgcatacccaagcagtgattcatcaa 45051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 129; Significance: 7e-67; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 21367 - 21176
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||    
T  21367 catcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatccaatctcaaat 21268  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||||| ||||||||||||| ||| ||||  |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  21267 taacaacaacttagga-aaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcat 21176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 14312 - 14121
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||  |||||||||    
T  14312 catcatcaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattcataacattaattgaacaagaatccaatctcaaat 14213  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     | ||||||||||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  14212 tatcaacaacttagga-aaattcaccaattgagcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcat 14121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 14114 - 14075
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  14114 atcatcaattcatgcatacagacataacatcacagcaaga 14075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 5552 - 5720
Alignment:
Q  35 acccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattca 134  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||    
T  5552 acccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatcacatctcaaattaacaacaacttaggagaaattca 5651  T
Q  135 ccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||| ||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  5652 ccaattgagcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcat 5720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 8878 - 9067
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||| |||||| |||||||||    
T  8878 catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat 8977  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||||  | ||||||||||||| ||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8978 taacaacaacttaaca-aaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatc 9067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 1124 - 1315
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| || |||||||| |||||  |||||||||||||||||| |||||| |||||||||    
T  1124 catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 1223  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1224 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 3843 - 3654
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatca 112  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| || ||||| |||||| |||||||||||||||||| |||||| ||||||||| |    
T  3843 tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta 3744  T
Q  113 acaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||| | ||||| ||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  3743 acaacaacttagca-aaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 3654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 5466 - 5276
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  5466 catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 5368  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     |||||||||| || | ||||||||||||| | ||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5367 taacaacaactcagca-aaattcaccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 3722 - 3914
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  3722 catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat 3821  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaaca-tttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | |||||||||||||   ||||||   ||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  3822 taacaacaacttagca-aaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcat 3914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 48187 - 48378
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||  ||||||||||||||||| |||||| |||||||||    
T  48187 catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat 48286  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||  | ||||||||||||| ||||||||  ||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  48287 taacaacaacttaaca-aaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcat 48378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 12115 - 12304
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| |    
T  12115 catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt 12214  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
      |||||||||||  | ||||||||||||||||||||||  ||| |||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  12215 --acaacaacttaaca-aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcat 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 6326 - 6136
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||| |||||| ||||| |||    
T  6326 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctc-aat 6228  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  | | ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6227 taacaacaacttagca-aaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcat 6136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 1218 - 1028
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||||| ||||||| |||| | ||||| |||    
T  1218 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctc-aat 1120  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||| ||||| ||||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  1119 taacaacaacttagca-aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcat 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 148721 - 148910
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||| || ||  |||| |||||  |||||||||||||||||| |||||| |||||||||    
T  148721 catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat 148820  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  148821 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 8849 - 9040
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||  | || ||||| ||| |   |||||||||||||||||| ||||| ||||||| |    
T  8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8949 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 19206 - 19395
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| |    
T  19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  19306 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 19395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 21290 - 21479
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||   ||||||||||||||||| |||||| | ||||| |    
T  21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    |||||||||||||| | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  21390 caacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatc 21479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 37176 - 36989
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||| ||||||||||| || ||| | |||||      
T  37176 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc 37077  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa 199  Q
    |||| ||||||||| | ||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  37076 caaccacaacttagca-aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaa 36989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 9596 - 9365
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  |||||||||| |||| || |||||| ||||||||| |||    
T  9596 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 9497  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcat 203  Q
    || ||||||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||           ||||    
T  9496 aataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 9398  T
Q  204 caattcatgcctacaaacataacatcacagcaa 236  Q
    |||||||||| ||||||||||||||||||||||    
T  9397 caattcatgcatacaaacataacatcacagcaa 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 16494 - 16263
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| |||||||||||||||||||||||| |||||||||  | || ||||| |||||  |||||||||| |||| || |||||| ||||||||| |||    
T  16494 atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac 16395  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaa-----------tcat 203  Q
    || ||||||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||           ||||    
T  16394 aataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat 16296  T
Q  204 caattcatgcctacaaacataacatcacagcaa 236  Q
    |||||||||| ||||||||||||||||||||||    
T  16295 caattcatgcatacaaacataacatcacagcaa 16263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 5324 - 5135
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||| || ||||| |||||  |||||||||||||||||| |||||| | ||||       
T  5324 catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 5225  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||| | | ||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  5224 taacaacaactttgca-aaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatc 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 2966 - 3200
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaa-catgaatcacatctcaaatcaa 113  Q
    |||||| ||||||||||||||| |||||| | |||||||||  | || |||||||||||   |||||||||||| || ||||||||| ||||||| ||||    
T  2966 atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa 3065  T
Q  114 caacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatca----------- 202  Q
    ||||||||||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||||||||||||||||||||||||               
T  3066 caacaacttagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatca 3164  T
Q  203 tcaattcatgcctacaaacataacatcacagcaaga 238  Q
    ||||||||||  ||||||||||||||||||||||||    
T  3165 tcaattcatggatacaaacataacatcacagcaaga 3200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 123427 - 123236
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||| || || ||||| |||||  |||||||||||||||||| |||||| | || ||      
T  123427 catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc 123328  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||||||||||| | ||||||||||||| ||||||||  ||| |||||| ||||| | | |||||||||||||||||||||||||||||||    
T  123327 taacaacaacttagca-aaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcat 123236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 26678 - 26489
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| ||| |||||||||||||||||||| |||||||||||| || ||||| |||||  |||||||||||||||||| |||||| | ||||       
T  26678 catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc 26579  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
     ||||||||||||| | ||||||||||||| || |||||  ||| |||||| |||||||||||||||||||||||| ||||||||| ||||    
T  26578 taacaacaacttagca-aaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatc 26489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 8440 - 8252
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||| |||||||||||||||| || |||||| ||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |    
T  8440 catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 8341  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||||   ||| | ||||||||||||| ||||||||  ||| ||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  8340 caacaaca---tagca-aaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcat 8252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 34724 - 34532
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaatt-gaacatgaatcacatctcaaa 109  Q
    ||||||||||||||||||||||||||||||| | | |||||||||  | || |||||||||||   ||||||||||||  ||||||||||| |||||||     
T  34724 catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 34625  T
Q  110 tcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||||||||||| | ||||||||| ||| || |||||  ||| ||||| | ||||||||| | ||||||||||||||||||||||||||||    
T  34624 tcaacaacaacttagca-aaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcat 34532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 171916 - 172096
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||| ||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||  | ||||| ||||| ||||||    
T  171916 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 172015  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  172016 tagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 172096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 177619 - 177799
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||| ||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| |||||  | ||||| ||||| ||||||    
T  177619 catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact 177718  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||||||| |||||||    
T  177719 tagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcat 177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 41648 - 41839
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  | || ||||  |||||   | |||||||||||||||||  || ||||  || |    
T  41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| ||| | ||||||||||||| | ||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  41748 caacaacaacatagca-aaattcaccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 41839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 41846 - 41880
Alignment:
Q  199 atcatcaattcatgcctacaaacataacatcacag 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  41846 atcatcaattcatgcatacaaacataacatcacag 41880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 48514 - 48620
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||| |||||| |||||||||    
T  48514 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatcaaatctcaaat 48613  T
Q  111 caacaac 117  Q
     ||||||    
T  48614 taacaac 48620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 272031 - 272216
Alignment:
Q  17 caatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaa 116  Q
    |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||   |||||| |||||||||| |||||| | |||||  |||| |    
T  272031 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca 272130  T
Q  117 caacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||| | ||||||||||||||||||||||  ||| |||||| ||||| | | ||||||||||||||||||| ||| |||||||    
T  272131 caacttagca-aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcat 272216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 69524 - 69565
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaac 120  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  69524 aacatcaattgaacatgaatctcatcacaattcaacaacaac 69565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 247694 - 247514
Alignment:
Q  22 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 121  Q
    |||||||||||||||||||||||| ||||||||| || || ||||| ||||| ||||||||||||||||||| |||||| | |||||   ||||||||||    
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  122 taggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||| | ||||| ||||||| ||||||||  ||| |||||| ||||| | | |||||||||||| |||||||||  |||||||    
T  247594 tagca-aaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcat 247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 1450 - 1318
Alignment:
Q  117 caacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat-----------catca 205  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||           |||||    
T  1450 caacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatca 1351  T
Q  206 attcatgcctacaaacataacatcacagcaaga 238  Q
    |||||||| ||||||||||||||||||||||||    
T  1350 attcatgcatacaaacataacatcacagcaaga 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 115 - 9
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| |||||| || ||||||    
T  115 catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataatatcatttgaacaagaatcaaatatcaaat 16  T
Q  111 caacaac 117  Q
     ||||||    
T  15 taacaac 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 41733 - 41917
Alignment:
Q  15 atcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaatcaac 114  Q
    |||||| ||||||||||||||||||| |||| ||||||||   | || | ||| |||||  |||| ||||||||||||| |||||| | |||||   |||    
T  41733 atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac 41832  T
Q  115 aacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaat 200  Q
    |||||||||| | ||||||||||||| ||||||||  ||| || ||| ||||||||||||||||| ||||||||||||||||||||    
T  41833 aacaacttagca-aaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaat 41917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 13506 - 13697
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| ||||||||||||||||||||  || |||||||||  | || ||||| |||||   | |||||||||||||||||  || ||||  || |    
T  13506 catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt 13605  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||| ||| | ||||||| ||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13606 caacaacaacatagca-aaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcat 13697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 797 - 606
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    |||| ||||| | |||||||||||||||||||||| ||||||||| || || ||||| || ||  ||||||||||||| |||| |||||| | || ||      
T  797 catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc 698  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
     ||||  ||||||| | ||||||||||||| || |||||  ||| |||| | ||||| | | |||||||||||||||||||||||||||||||    
T  697 taacagtaacttagca-aaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcat 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9382 - 9471
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 100  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||||||||||| ||||||    
T  9382 catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatca 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 13480 - 13385
Alignment:
Q  107 aaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| ||||| ||||||| | ||||||||||||| ||||| ||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  13480 aaattaacaataacttagca-aaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcat 13385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 37328 - 37138
Alignment:
Q  11 catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat 110  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||  | || ||| | || |||  | ||||||||||| ||| |||||| | |||||      
T  37328 catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc 37229  T
Q  111 caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||| |||||  | |  ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  37228 caactacaac--atgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 37138  T

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Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 51328 - 51256
Alignment:
Q  129 aattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatc 201  Q
    |||||||||||| ||||||||  ||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  51328 aattcaccaattgagcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatc 51256  T

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Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 45098 - 45222
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | ||||||||||||| || |||||  ||| ||||| |||||| |||||| |||    
T  45098 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcaccaattgagtacaat-ttcaaaacttgacatttatacatacttt 45195  T
Q  178 g-aacatgtaatttcaccaacaatcat 203  Q
    | |||||||||||||||| ||||||||    
T  45196 gaaacatgtaatttcacccacaatcat 45222  T

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Target: scaffold0066; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 54484 - 54608
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||  | ||||||||||||| || |||||  ||||||||| |||||| |||||| |||    
T  54484 aacatcaatggaacatgaatcacatctcatttcaacaacaacatatca-aaattcaccaattgagtacaat-ttcataacttgacatttatacatacttt 54581  T
Q  178 g-aacatgtaatttcaccaacaatcat 203  Q
    | |||||| ||||||||| ||||||||    
T  54582 gaaacatgcaatttcacccacaatcat 54608  T

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Target: scaffold0084 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 56295 - 56171
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata--tt 176  Q
    ||||||||| ||||||||||||||| ||   ||||||||||||||| | |||||||||| || ||||||||  ||||||||| |||||| ||||||  ||    
T  56295 aacatcaatggaacatgaatcacatatcttttcaacaacaacttagca-aaattcaccatttgagcacaat-ttcataacttgacatttatacatacttt 56198  T
Q  177 tgaacatgtaatttcaccaacaatcat 203  Q
      |||||||||||||| | ||||||||    
T  56197 aaaacatgtaatttcagccacaatcat 56171  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 89600 - 89526
Alignment:
Q  129 aattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    |||||||||||| ||||||||  ||| ||||||  |||| | | |||||||||||||||||||||||||||||||    
T  89600 aattcaccaattgagcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcat 89526  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 3257 - 3381
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacata-ttt 177  Q
    |||||||||||||||  |||||||| ||   ||||||||||||||| | |||||||||| || || |||||  ||||||||| | |||| |||||| |||    
T  3257 aacatcaattgaacaataatcacatatcctctcaacaacaacttagca-aaattcaccatttgagtacaat-ttcataacttgatatttatacatacttt 3354  T
Q  178 g-aacatgtaatttcaccaacaatcat 203  Q
    | || ||||||||||||||||||||||    
T  3355 gaaatatgtaatttcaccaacaatcat 3381  T

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Target: scaffold0361; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 3210 - 3264
Alignment:
Q  13 tcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaa 67  Q
    |||||||| ||||||||||| ||||||| |||| |||||||||||| || |||||    
T  3210 tcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatcaa 3264  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 22602 - 22483
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttaggagaaattcaccaattt-agcacaatactcataacttaacatttttacata-tt 176  Q
    |||||||||| ||||||| ||||||||||| ||||||||||| ||| |  ||||||  ||||| |||| |||  |||||| ||| ||||| |||||| ||    
T  22602 aacatcaattaaacatgattcacatctcaattcaacaacaacatagca-caattcaataatttgagcataat--tcataagttagcatttatacatattt 22506  T
Q  177 tgaacatgtaatttcaccaacaa 199  Q
    |||||||| || |||||||||||    
T  22505 tgaacatgcaaattcaccaacaa 22483  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 22656 - 22731
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  22656 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 22731  T

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Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 26911 - 26986
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  26911 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 26986  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 1729 - 1654
Alignment:
Q  128 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcat 203  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||  |||||||||||| ||||||||||||    
T  1729 aaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcat 1654  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 197433 - 197386
Alignment:
Q  79 aacatcaattgaacatgaatcacatctcaaatcaacaacaacttagga 126  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  197433 aacatcaattgaacatgaatctcatcacaattcaacaacaacatagga 197386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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