View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5296_low_15 (Length: 240)

Name: NF5296_low_15
Description: NF5296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5296_low_15
NF5296_low_15
[»] chr8 (17 HSPs)
chr8 (1-240)||(396315-396554)
chr8 (186-240)||(17920954-17921007)
chr8 (186-240)||(40362433-40362486)
chr8 (143-240)||(39698768-39698864)
chr8 (186-237)||(9812171-9812221)
chr8 (185-240)||(31693723-31693777)
chr8 (189-240)||(43084729-43084779)
chr8 (186-240)||(6374412-6374465)
chr8 (186-240)||(15160548-15160601)
chr8 (186-240)||(39463257-39463310)
chr8 (186-240)||(39765961-39766014)
chr8 (186-240)||(40228572-40228625)
chr8 (193-240)||(43974893-43974939)
chr8 (186-240)||(4989476-4989529)
chr8 (186-240)||(6116107-6116160)
chr8 (186-240)||(37559635-37559688)
chr8 (143-176)||(8106800-8106833)
[»] chr5 (22 HSPs)
chr5 (143-240)||(39566137-39566234)
chr5 (189-240)||(27797782-27797832)
chr5 (186-240)||(3025033-3025086)
chr5 (186-240)||(7317026-7317079)
chr5 (186-240)||(10345034-10345087)
chr5 (186-240)||(26660753-26660806)
chr5 (186-240)||(26932346-26932399)
chr5 (186-240)||(42104165-42104218)
chr5 (189-240)||(3306111-3306161)
chr5 (193-240)||(14620596-14620642)
chr5 (185-240)||(21319412-21319466)
chr5 (189-240)||(36164888-36164938)
chr5 (186-240)||(39504720-39504774)
chr5 (186-237)||(43584482-43584532)
chr5 (186-240)||(2729888-2729941)
chr5 (186-240)||(6518974-6519027)
chr5 (186-240)||(7579971-7580024)
chr5 (187-237)||(15167115-15167164)
chr5 (186-240)||(24280991-24281044)
chr5 (186-240)||(24381168-24381221)
chr5 (141-177)||(15566450-15566486)
chr5 (141-177)||(29653422-29653458)
[»] chr3 (27 HSPs)
chr3 (143-237)||(33194133-33194226)
chr3 (186-240)||(45213821-45213874)
chr3 (186-240)||(50038270-50038323)
chr3 (186-240)||(53200779-53200832)
chr3 (142-240)||(19115341-19115438)
chr3 (143-240)||(3152905-3153001)
chr3 (185-240)||(11393542-11393596)
chr3 (140-240)||(38016327-38016426)
chr3 (186-240)||(30426423-30426476)
chr3 (186-240)||(41850388-41850441)
chr3 (186-240)||(48901718-48901771)
chr3 (186-240)||(48903284-48903337)
chr3 (189-240)||(9189534-9189584)
chr3 (185-240)||(44676218-44676272)
chr3 (186-237)||(47137961-47138011)
chr3 (186-240)||(2458005-2458058)
chr3 (186-240)||(4758989-4759042)
chr3 (186-240)||(32492280-32492333)
chr3 (186-240)||(39356883-39356936)
chr3 (186-240)||(42071983-42072036)
chr3 (186-240)||(42571628-42571681)
chr3 (186-240)||(47895443-47895496)
chr3 (186-240)||(50088415-50088468)
chr3 (186-240)||(50646209-50646262)
chr3 (187-240)||(7230995-7231047)
chr3 (187-240)||(36460805-36460857)
chr3 (141-177)||(38277959-38277995)
[»] chr2 (27 HSPs)
chr2 (143-240)||(32228113-32228209)
chr2 (186-240)||(6220506-6220559)
chr2 (186-240)||(45301763-45301816)
chr2 (143-240)||(5717468-5717564)
chr2 (185-240)||(17703016-17703070)
chr2 (185-240)||(43427389-43427443)
chr2 (186-240)||(18719534-18719587)
chr2 (186-240)||(25383586-25383639)
chr2 (186-240)||(29411694-29411747)
chr2 (186-240)||(29808810-29808863)
chr2 (186-240)||(43971502-43971555)
chr2 (142-240)||(16792438-16792534)
chr2 (143-240)||(29396782-29396879)
chr2 (186-234)||(38926604-38926651)
chr2 (185-240)||(13561991-13562045)
chr2 (186-237)||(28072565-28072615)
chr2 (186-240)||(441333-441386)
chr2 (186-240)||(4133022-4133075)
chr2 (186-240)||(4469499-4469552)
chr2 (186-240)||(8540036-8540089)
chr2 (186-240)||(12342091-12342144)
chr2 (186-240)||(14833837-14833890)
chr2 (186-240)||(18579165-18579218)
chr2 (194-240)||(27964472-27964517)
chr2 (143-177)||(42743233-42743267)
chr2 (189-240)||(7874746-7874795)
chr2 (188-240)||(45423618-45423669)
[»] chr7 (25 HSPs)
chr7 (148-240)||(715963-716054)
chr7 (186-240)||(19105101-19105154)
chr7 (186-240)||(24680126-24680179)
chr7 (186-237)||(27935765-27935815)
chr7 (186-240)||(13405227-13405280)
chr7 (186-240)||(22297994-22298047)
chr7 (186-240)||(27947601-27947654)
chr7 (186-240)||(42285906-42285959)
chr7 (186-240)||(45948730-45948783)
chr7 (185-239)||(48843549-48843602)
chr7 (143-240)||(12977786-12977883)
chr7 (143-240)||(44567141-44567238)
chr7 (143-240)||(1741946-1742042)
chr7 (189-240)||(10476137-10476187)
chr7 (185-240)||(34274791-34274845)
chr7 (186-240)||(2297036-2297089)
chr7 (186-240)||(8603973-8604026)
chr7 (186-240)||(23935420-23935473)
chr7 (186-240)||(29531035-29531088)
chr7 (186-240)||(33939834-33939887)
chr7 (186-240)||(42880034-42880087)
chr7 (187-240)||(10599212-10599264)
chr7 (193-238)||(18270582-18270626)
chr7 (188-237)||(40927163-40927211)
chr7 (186-238)||(18292333-18292384)
[»] chr1 (28 HSPs)
chr1 (185-240)||(12591182-12591236)
chr1 (185-240)||(15823031-15823085)
chr1 (143-240)||(50249264-50249361)
chr1 (143-240)||(44557144-44557240)
chr1 (185-240)||(9915440-9915494)
chr1 (189-240)||(25487089-25487139)
chr1 (185-240)||(26352181-26352235)
chr1 (186-240)||(29567894-29567947)
chr1 (186-240)||(32807038-32807091)
chr1 (186-240)||(44258607-44258660)
chr1 (187-240)||(26595169-26595221)
chr1 (186-237)||(1740744-1740794)
chr1 (186-237)||(15573605-15573655)
chr1 (186-240)||(18794642-18794694)
chr1 (193-240)||(50094234-50094280)
chr1 (186-240)||(5463573-5463626)
chr1 (186-240)||(13408365-13408418)
chr1 (186-240)||(34032180-34032233)
chr1 (186-240)||(34047335-34047388)
chr1 (186-240)||(35848033-35848086)
chr1 (186-240)||(38531397-38531450)
chr1 (186-240)||(44108597-44108650)
chr1 (186-240)||(48009008-48009061)
chr1 (186-235)||(30292938-30292986)
chr1 (189-237)||(14373516-14373563)
chr1 (143-240)||(27720913-27721009)
chr1 (141-177)||(44024497-44024533)
chr1 (186-238)||(48025356-48025407)
[»] scaffold0565 (1 HSPs)
scaffold0565 (186-240)||(9743-9796)
[»] chr6 (11 HSPs)
chr6 (143-240)||(24163816-24163912)
chr6 (186-240)||(234032-234085)
chr6 (186-240)||(18737192-18737245)
chr6 (189-237)||(12588527-12588574)
chr6 (193-240)||(19674985-19675031)
chr6 (185-240)||(32193699-32193753)
chr6 (186-240)||(4850597-4850650)
chr6 (186-236)||(9940646-9940695)
chr6 (187-237)||(13503953-13504002)
chr6 (143-177)||(17345050-17345084)
chr6 (186-240)||(29399944-29399997)
[»] scaffold0332 (1 HSPs)
scaffold0332 (185-240)||(3912-3966)
[»] scaffold0110 (1 HSPs)
scaffold0110 (186-240)||(24842-24895)
[»] chr4 (26 HSPs)
chr4 (186-240)||(4505335-4505388)
chr4 (186-240)||(19451317-19451370)
chr4 (186-240)||(19878646-19878699)
chr4 (186-240)||(25231173-25231226)
chr4 (186-240)||(45043694-45043747)
chr4 (186-240)||(52957896-52957949)
chr4 (143-240)||(1819517-1819613)
chr4 (143-240)||(37624511-37624607)
chr4 (193-240)||(2728504-2728550)
chr4 (193-240)||(39982108-39982154)
chr4 (186-237)||(49089462-49089512)
chr4 (186-240)||(10573260-10573313)
chr4 (186-240)||(20448037-20448090)
chr4 (186-240)||(40345453-40345506)
chr4 (186-240)||(41920415-41920468)
chr4 (186-240)||(44571971-44572024)
chr4 (186-240)||(47817736-47817789)
chr4 (186-240)||(51733600-51733653)
chr4 (186-240)||(52253843-52253896)
chr4 (186-240)||(52848160-52848213)
chr4 (186-240)||(52915648-52915701)
chr4 (191-240)||(21864489-21864537)
chr4 (191-240)||(21920350-21920398)
chr4 (186-231)||(33033076-33033120)
chr4 (143-176)||(51737237-51737270)
chr4 (187-240)||(56460082-56460134)
[»] scaffold2107 (1 HSPs)
scaffold2107 (189-240)||(615-665)
[»] scaffold0182 (1 HSPs)
scaffold0182 (193-240)||(18356-18402)
[»] scaffold0026 (1 HSPs)
scaffold0026 (189-240)||(4141-4192)
[»] scaffold0015 (1 HSPs)
scaffold0015 (189-240)||(21183-21233)
[»] scaffold0078 (1 HSPs)
scaffold0078 (186-240)||(1515-1568)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 396554 - 396315
Alignment:
Q  1 cctcttcaaagagcgtgttgtttctccttttccacatataccaagatatcataaaagtgaagctcttatcagcatagtgttgacttatttaagcttacta 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  396554 cctcttcaaagagcgtgttgtttctccgtttccacatataccaagatatcataaaagtgaagctctcattagcatagtgttgacttatttaagcttacta 396455  T
Q  101 gaacatttatgagattgtttgacataacttatagaattaaattactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||||||||    
T  396454 gaacatttatgagattgtttgacataacttatagaattaaattactccctccattttaaaatgagtgtcgctttagcaaaaaacattgttttaaaatgaa 396355  T
Q  201 tgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  396354 tgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  17920954 ttgttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  40362433 ttgttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 39698864 - 39698768
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||| ||||||||| ||| ||||||        |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  39698864 tactccctccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 39698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  9812171 ttgttttaaaatgaatgtcac-tttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31693777 - 31693723
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  31693777 tttgttttaaaatgaatatcacttt-cagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 43084779 - 43084729
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  43084779 ttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  6374412 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 15160601 - 15160548
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15160601 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 15160548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 39463257 - 39463310
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  39463257 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 39463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39766014 - 39765961
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  39766014 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 39765961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  40228572 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 43974939 - 43974893
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  43974939 aaaatgaatgtcactttt-agtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4989476 - 4989529
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  4989476 ttgtttcaaaatgaatatcacttt-cagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 6116160 - 6116107
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  6116160 ttgttttaaaatgaatatcacttt-cggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 37559688 - 37559635
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||||||| ||||||  ||| ||||||||||||||||||    
T  37559688 ttgttttaaaatcaatgtcacttt-cagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 8106800 - 8106833
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttag 176  Q
    |||||||||||||||||||||||||||| |||||    
T  8106800 tactccctccattttaaaatgagtatcgatttag 8106833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 39566137 - 39566234
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnn-tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||| ||||||        |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  39566137 tactccatccattttaaaatgagtgtcgttttagcccaaaaaatttgttttaaaatgaatgtcac-tttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 27797782 - 27797832
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  27797782 ttttaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 27797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  3025086 ttgtttcaaaatgaatgtcactttt-agtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 7317026 - 7317079
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  7317026 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 10345087 - 10345034
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  10345087 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  26660753 ttgttttaaaatgaatgtcac-tttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  26932346 ttgttttaaaatgaatgtcac-tttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 3306161 - 3306111
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  3306161 ttttaaaatgaatgtcacttt-cagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 14620642 - 14620596
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  14620642 aaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21319466 - 21319412
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  21319466 tttgtttcaaaatgaatgtcacttt-cagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 36164888 - 36164938
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||||||  |||||| |||||||||||||||    
T  36164888 ttttaaaatgaatgtca-ttttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaa-taataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcac-tttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 43584532 - 43584482
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||||||||||||||||||  ||||||||||  |||||||||||||||||||    
T  43584532 ttgttttaaaatgaatgtcg-ttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 2729941 - 2729888
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| || |||  ||||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcacttt-cactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgcttt-cagttttcaatgcaataataactttttctt 6519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 7580024 - 7579971
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||| ||||| ||||||  ||| ||||||||||||||||||    
T  7580024 ttgttttaaaatgaatgttacttt-cagttttcaatacaataataactttttctt 7579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  15167164 tgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  24280991 ttgtttcaaaatgaatgtcactttt-agtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  24381221 ttgtttcaaaatgaatgtcactttt-agtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 15566450 - 15566486
Alignment:
Q  141 attactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  15566450 attactccctccgttttaaaatgagtgtcgctttagc 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 29653422 - 29653458
Alignment:
Q  141 attactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  29653422 attactccctccattttaaaatgagtgtcgttttagc 29653458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 33194226 - 33194133
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||||||||||||||||||||||| ||| ||||||        ||||||||||||||||||||| |||||||||  |||||||| ||||||||||    
T  33194226 tactccctccattttaaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcac-tttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 45213874 - 45213821
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  45213874 ttgttttaaaatgaatgtcacttt-cagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 50038323 - 50038270
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  50038323 ttgttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcactttt-agttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 19115341 - 19115438
Alignment:
Q  142 ttactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||| ||||||||||||  ||||||||||        |||||| |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  19115341 ttactccctccgttttaaaatgagcgtcgctttagccaaaaaaattgtttcaaaatgaatgtcactttg-agtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 3153001 - 3152905
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||||||||||||| ||  ||||||        |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  3153001 tactccctccgttttaaaatgagtgtcattttagcaaaaaaaattgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 11393542 - 11393596
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||    
T  11393542 tttgttttaaaatgaatgtca-ttttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 38016327 - 38016426
Alignment:
Q  140 aattactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttct 239  Q
    ||||||||| ||| ||| ||||||||| ||| ||||||        |||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  38016327 aattactccatccgtttcaaaatgagtgtcgttttagccaaagaaattgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttct 38016425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacactttt-agtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  48901718 ttgtttcaaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  48903284 ttgtttcaaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 9189584 - 9189534
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  9189584 ttttaaaatgaatgtcacttt-cagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 44676218 - 44676272
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| |||||||||||||| |||||||||  |||||||| |||||||||||||    
T  44676218 tttgtttcaaaatgaatgtcac-tttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 47137961 - 47138011
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||||||||||||||||||| |||| |||||  |||||||||||||||||||    
T  47137961 ttgttttaaaatgaatgtca-tttttagttttcaatgcaataataacttttt 47138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||| ||||||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcacttt-cagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4758989 - 4759042
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||||||| || |||  ||||||||||||||||||||||    
T  4758989 ttgttttaaaataaatgtcacttt-cactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 32492333 - 32492280
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| || |||  ||||||||||||||||||||||    
T  32492333 ttgtttcaaaatgaatgtcacttt-caattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 39356883 - 39356936
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||||||| ||||||  |||||||||||||| |||||||    
T  39356883 ttgttttaaaataaatgtcacttt-cagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 42071983 - 42072036
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| |||||| |||| |||||  ||||||||||||||||||||||    
T  42071983 ttgttttaaaatggatgtcattttt-agtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 42571681 - 42571628
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  42571681 ttgtttcaaaatgaatgtcacttg-cagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| || |||  ||||||||||||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcacttt-caatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 50088468 - 50088415
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||| ||||||||| |||||  ||||||||| ||||||||||||    
T  50088468 ttgttttaaaatgaacgtcactttt-agtttccaatgcaatagtaactttttctt 50088415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 50646262 - 50646209
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  50646262 ttgtttcaaaataaatgtcacttt-cagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||| |||||||||||||||||| ||||   ||||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcactttt-agttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||| ||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  36460805 tgtttcaaaatgaatatcacttt-cagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 38277995 - 38277959
Alignment:
Q  141 attactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  38277995 attactccctccattttaaaatgagtgtcgttttagc 38277959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 32228209 - 32228113
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||| ||||||||||||| ||| ||||||        |||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  32228209 tactccatccgttttaaaatgagtgtcgttttagcaaaataaattgttttaaaatgaatgtcactttt-ggttttaaatgcaataataactttttctt 32228113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcactttt-agtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  45301763 ttgttttaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 5717468 - 5717564
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||| ||||||||||||| ||||||||||         |||||||||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  5717468 tactccatccgttttaaaatgagtgtcgctttagcaaaaaaaaatgttttaaaatgaatgtcac-tttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 17703016 - 17703070
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  17703016 tttgttttaaaatgaatgtcac-tttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 43427443 - 43427389
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  43427443 tttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 18719587 - 18719534
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  18719587 ttgttttgaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgtta-ttttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29411694 - 29411747
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||| |||||||    
T  29411694 ttgttttaaaatgaatgtcactttt-agttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcac-tttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  43971502 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 16792438 - 16792534
Alignment:
Q  142 ttactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| ||| ||||||||||||| ||||||||||       || |||| |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  16792438 ttactccatccgttttaaaatgagtgtcgctttagcaaaaaaatt-gtttcaaaatgaatgtcactttg-agtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 29396879 - 29396782
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttag-cnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||| ||||||||| ||||||||| |        |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  29396879 tactccctccatttcaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcacttt-cggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 38926604 - 38926651
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactt 234  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcac-tttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 13561991 - 13562045
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| ||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  13561991 tttgtttcaaaataaatgtcacttt-cagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcac-tttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  441386 ttgtttcaaaatgaatgtcacttt-ctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4133022 - 4133075
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  4133022 ttgtttcaaaatgaatgtcacttt-cggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4469499 - 4469552
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||| ||||||| ||||||  ||| ||||||||||||||||||    
T  4469499 ttgttttaaaatgaatttcacttt-cagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8540036 - 8540089
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| || ||||||||||  | ||||||||||||||||||||    
T  8540036 ttgttttaaaatgaatgaca-ttttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 12342091 - 12342144
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcacttt-cggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||| |||  ||||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcac-tttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  18579165 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 27964517 - 27964472
Alignment:
Q  194 aaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  27964517 aaatgaatgtcactttt-agtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 42743267 - 42743233
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||||||||||||||| ||||||||||    
T  42743267 tactccctccattttaaaatgagtgtcgctttagc 42743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 7874795 - 7874746
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||| ||||||||||||  ||||  ||||||||||||||||||||||    
T  7874795 ttttaaaattaatgtcactttt--gtttccaatgcaataataactttttctt 7874746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 45423618 - 45423669
Alignment:
Q  188 gttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||| | ||||||||||  ||||||||||||||||||||||    
T  45423618 gttttaaaatgattgtta-ttttcagtttccaatgcaataataactttttctt 45423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 716054 - 715963
Alignment:
Q  148 cctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||| ||||||||||||| ||||||||||       ||||||| |||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  716054 cctccgttttaaaatgagtgtcgctttagccaaaaaatttgtttcaaaatgaatgtcac-tttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  19105154 ttgttttaaaatgaatgtcacttt-cagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  24680126 ttgttttaaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  27935765 ttgttttaaaatgaatgtcac-tttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  |||| |||||||||||||||||    
T  13405280 ttgttttaaaatgaatgtcac-tttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 22297994 - 22298047
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  22297994 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27947654 - 27947601
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  27947654 ttgtcttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  42285906 ttgttttaaaatgaatgtca-ttttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 45948783 - 45948730
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  45948783 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 48843549 - 48843602
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttct 239  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||| |||||||    
T  48843549 tttgttttaaaatgaatgtcac-tttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 12977883 - 12977786
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnnt-ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||||||||||||| ||||||||||         |||||| ||||||||||||||||| || |||  ||||||||||||||||||||||    
T  12977883 tactccctcctttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcacttt-caatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 44567238 - 44567141
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttag-cnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| |||||||||| || ||||||||| |       |||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||    
T  44567238 tactccctccgttttaaaatgggtgtcgctttagtcaaaaaaatttgttttaaaatgaatgtcac-tttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 1741946 - 1742042
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||| ||||||||| ||| ||||||        |||||| ||||||||||||||||| ||||||  |||||||||||||| |||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgttttagcccaaaaagttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 10476137 - 10476187
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| || |||  ||||||||||||||||||||||    
T  10476137 ttttaaaatgaatgtcacttt-cactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 34274791 - 34274845
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| |||||||||||||| |||||||||  |||||||||||||| |||||||    
T  34274791 tttgtttcaaaatgaatgtcac-tttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 2297036 - 2297089
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  |||||||||||| |||||||||    
T  2297036 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||| |||||||| || |||  ||||||||||||||||||||||    
T  8603973 ttgttttaaaatgaacgtcacttt-caatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||  ||||||||||  ||||||||||||||||||||||    
T  23935420 ttgttttaaaataaatgtcg-ttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 29531088 - 29531035
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  29531088 ttgttttgaaatgaatgtca-ttttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 33939887 - 33939834
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||||  ||||  |||| |||||||||||||||||    
T  33939887 ttgttttaaaatgaatgtcactttt-ggtttccaatgtaataataactttttctt 33939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  |||| |||||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcacttt-cagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 10599212 - 10599264
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||| ||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  10599212 tgtttcaaaatgaatatcacttt-cagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 18270582 - 18270626
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttc 238  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  18270582 aaaatgaatgtcacttt-cagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  188 gttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcacttt-cagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 18292333 - 18292384
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttc 238  Q
    |||||| |||||||||||||| ||||| |||  ||||||||||||||||||||    
T  18292333 ttgtttcaaaatgaatgtcac-tttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 12591236 - 12591182
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  12591236 tttgttttaaaatgaatgtcactttt-agtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 15823031 - 15823085
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  15823031 tttgttttaaaatgaatgtcac-tttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 50249264 - 50249361
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnn-tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||  ||||||||||||| ||||||||||        ||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  50249264 tactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 44557240 - 44557144
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||| ||||||||||||| |||||||||        |||||||||||||||||||||| ||||||| |  |||||||||||||| |||||||    
T  44557240 tactccatccgttttaaaatgagtttcgctttagtaaaaaaatttgttttaaaatgaatgtcac-tttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 9915440 - 9915494
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  9915440 tttgttttaaaatgaatgtca-ttttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 25487089 - 25487139
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  25487089 ttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 26352235 - 26352181
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  26352235 tttgtttcaaaatgaatgtcactttt-agttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  29567894 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 32807091 - 32807038
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  32807091 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  44258660 ttgttttaaaatgaatgtcac-tttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcac-tttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||||||||| |||||||||  |||| ||||||||||||||    
T  1740794 ttgttttaaaatgaatgtcac-tttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  15573605 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| |||||||  |||||||||  ||||||||||||||||||||||    
T  18794694 ttgttttaaaataaatgtca--tttcagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 50094234 - 50094280
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  50094234 aaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 5463573 - 5463626
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  5463573 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 13408418 - 13408365
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||| | ||||| ||||||  ||||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttacttt-cagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 34032233 - 34032180
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  34032233 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 34047388 - 34047335
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttg-agtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||| ||||||||||||| ||||||  ||||||||||||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcacttt-cagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 38531450 - 38531397
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  38531450 ttgtttcaaaatgaatgtca-ttttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||||||| ||||||  ||| ||||||||||||||||||    
T  44108597 ttgttttaaaataaatgtcacttt-cagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 48009008 - 48009061
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| || |||| |||||  ||||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcattttt-agtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30292938 - 30292986
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttt 235  Q
    ||||||||||||||||| ||| |||||||||  |||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccac-tttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 14373563 - 14373516
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||    
T  14373563 ttttaaaatgaatgtca-ttttcagtttccaatgcaacaataacttttt 14373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 27720913 - 27721009
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||| ||| ||||||||| ||||||||||       ||| ||| |||||||||||||| |||||||||  |||  |||||||||||||||||    
T  27720913 tactccatccgtttcaaaatgagtgtcgctttagccaaaaaatttatttaaaaatgaatgtcac-tttcagttttcaatataataataactttttctt 27721009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 44024497 - 44024533
Alignment:
Q  141 attactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  44024497 attactccctccgttttaaaatgagtgtcgctttagc 44024533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 48025407 - 48025356
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttc 238  Q
    |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||    
T  48025407 ttgtttcaaaatgaatgtcacttt-cggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 9796 - 9743
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  9796 ttgttttaaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 24163912 - 24163816
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||||||||||||| ||  ||||||        ||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  24163912 tactccctccgttttaaaatgagtgtcattttagccaaaaaaattgttttaaaatgaatgtcac-tttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 234032 - 234085
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  234032 ttgtttcaaaatgaatgtcactttt-agtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||| ||||||    
T  18737245 ttgttttaaaatgaatgtcac-tttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 12588527 - 12588574
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  12588527 ttttaaaatgaatgttacttt-cagtttgcaatgcaataataacttttt 12588574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 19674985 - 19675031
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  19674985 aaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 32193699 - 32193753
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| |||||||||||| |||||  ||||||||||||| ||||||||    
T  32193699 tttgttttaaaataaatgtcactttt-agtttctaatgcaataataattttttctt 32193753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| || |||  ||||||||||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcacttt-caatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 9940646 - 9940695
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttt 236  Q
    |||||||||||||| ||||||||| ||||||  ||||||||||||||||||    
T  9940646 ttgttttaaaatgattgtcacttt-cagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  13504002 tgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 17345050 - 17345084
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagc 177  Q
    |||||||||||||||||||||||| ||||||||||    
T  17345050 tactccctccattttaaaatgagtgtcgctttagc 17345084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 29399944 - 29399997
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3966 - 3912
Alignment:
Q  185 tttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  3966 tttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 24895 - 24842
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  24895 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 4505335 - 4505388
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  19451370 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 19878646 - 19878699
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  19878646 ttgtttgaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 25231173 - 25231226
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  25231173 ttgttttaaaatgaatgtcac-tttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||    
T  45043747 ttgttttaaaatgaatgtcac-tttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 52957949 - 52957896
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 1819517 - 1819613
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||| ||||||||| ||| ||||||        |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  1819517 tactccatccatttcaaaatgagtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 37624511 - 37624607
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttagcnnnnnnntttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||| ||| |||||||||  |||||||||        |||||| ||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  37624511 tactccctccgtttcaaaatgagtgacgctttagcaaaaaaaattgtttcaaaataaatgtcacttt-cagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 2728550 - 2728504
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  2728550 aaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 39982108 - 39982154
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  39982108 aaaatgaatgtcacttt-cagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataacttttt 237  Q
    |||||| |||||||||||||||||| |||||  |||||||||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcactttt-agttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||| |||| |||||  ||||||||||||||||||||||    
T  10573313 ttgtttcaaaatgaatgtcattttt-agtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  20448037 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  40345506 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||| ||||||| ||||||||||  || |||||||||||||||||||    
T  41920468 ttgttttaaaataaatgtca-ttttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||| |||| ||||||  |||||||||| |||||||||||    
T  44572024 ttgttttaaaatgaatgtcgcttt-cagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||| | ||||| ||||||| ||||||||||||||||||||||    
T  47817736 ttgtttcaaaatgaatttaacttt-cagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  51733653 ttgtttcaaaatgaatgtcacttt-cagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 52253843 - 52253896
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||    
T  52253843 ttgtttcaaaatgaatgtcacttt-cagtttccaatgcaataataacttcttctt 52253896  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 52848213 - 52848160
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||| |||  ||||||||||||| ||||||||    
T  52848213 ttgttttaaaatgaatgtcac-tttcaatttccaatgcaataataattttttctt 52848160  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 52915701 - 52915648
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| |||||||||||| |||| ||||||  ||||||||||||||||||||||    
T  52915701 ttgtttcaaaatgaatgtcgcttt-cagtttccaatgcaataataactttttctt 52915648  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 21864537 - 21864489
Alignment:
Q  191 ttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  21864537 ttaaaatgaatgttacttt-cagtttccaatgcaataataactttttctt 21864489  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 21920398 - 21920350
Alignment:
Q  191 ttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  21920398 ttaaaatgaatgttacttt-cagtttccaatgcaataataactttttctt 21920350  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataa 231  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||    
T  33033076 ttgttttaaaatgaatgtcactttt-agtttccaatgcaataataa 33033120  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 51737237 - 51737270
Alignment:
Q  143 tactccctccattttaaaatgagtatcgctttag 176  Q
    |||||||||||||||||||||||| |||||||||    
T  51737237 tactccctccattttaaaatgagtgtcgctttag 51737270  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 56460082 - 56460134
Alignment:
Q  187 tgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||||||||||||||||| |||||| ||  ||||||||| ||||||||||||    
T  56460082 tgttttaaaatgaatgtcac-tttcagctttcaatgcaatagtaactttttctt 56460134  T

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Target: scaffold2107 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 665 - 615
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  665 ttttaaaatgaatgtcacttt-cagtttccaatgcaataataattttttctt 615  T

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Target: scaffold0182 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 18402 - 18356
Alignment:
Q  193 aaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  18402 aaaatgaatgtca-ttttcagtttccaatgcaataataactttttctt 18356  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 4141 - 4192
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||||||||| |||||| |||  ||||||||||||| ||||||||    
T  4141 ttttaaaatgaatgtcatttttcaattttcaatgcaataataattttttctt 4192  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 21233 - 21183
Alignment:
Q  189 ttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    ||||||||||| ||||||||| |||||| |||||||||||||| ||||||||    
T  21233 ttttaaaatgactgtcacttt-cagtttcaaatgcaataataattttttctt 21183  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 1568 - 1515
Alignment:
Q  186 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 240  Q
    |||||| ||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  1568 ttgtttcaaaatgaatgtcacttt-cagtttctaatgcaatgataactttttctt 1515  T

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