View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5297_high_1 (Length: 482)
Name: NF5297_high_1
Description: NF5297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5297_high_1 |
 | |
|
| [»] scaffold0072 (1 HSPs) |
| | |
|
| [»] scaffold0380 (1 HSPs) |
| | |
|
| [»] scaffold0069 (1 HSPs) |
| | |
|
| [»] scaffold0459 (1 HSPs) |
| | |
|
| [»] scaffold0366 (2 HSPs) |
| | |
|
| [»] scaffold0100 (1 HSPs) |
| | |
|
| [»] scaffold0385 (1 HSPs) |
| | |
|
| [»] scaffold0031 (1 HSPs) |
| | |
|
| [»] scaffold0060 (1 HSPs) |
| | |
|
| [»] scaffold0287 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 370; Significance: 0; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 33 - 455
Target Start/End: Original strand, 52099838 - 52100260
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaattatcctatacacaattgtggatactaatctcctcaaaggatcaaattg |
132 |
Q |
| |
|
|||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52099838 |
acctatttttctcttcacaacttctcttctaaaccaaacacaccctaaaagttatcctatacacaattgtggatactaatctcctcaaaggatcaaattg |
52099937 |
T |
|
| Q |
133 |
atcaagaccatgtgaacaacaaaacactcaagagttttaatattggtgcttttttaaaattgaattcaaacttaaaatcaatagttaaactnnnnnnnct |
232 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
52099938 |
atcaagaccatgtgaacagcaaaacactcaagagttttaatgttggtgcttttttaaaattgaattcaaacttaaaatcaatagttaaactaaaaaaact |
52100037 |
T |
|
| Q |
233 |
caaattatttcacatgcaaatgcttttgccatatattgaatctattattgtttaaatcaaatatcatgcgcacgaactgcatacatttaaactctccata |
332 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52100038 |
caaattatttcatatgcaaatgcttttgccatatattgaatctattattgtttaaatcaaatatcatgcgcacgaactgcatacatttaaactctccata |
52100137 |
T |
|
| Q |
333 |
aagagttgtatttctcatccaagagctcttccgtcgccacgtattaaatttgttttattgtcacacgggtgaaatatgttacttgctcaacgatcaatag |
432 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
52100138 |
aagagttgtatttctcatccaagagctcttccgtcgccacgtattaaatttgttttattgtcacacgggtgaaatatgttacttgctcaacggtcaatag |
52100237 |
T |
|
| Q |
433 |
caaacggtttattattacaaaat |
455 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
52100238 |
caaacggtttattattacaaaat |
52100260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 52796832 - 52796882
Alignment:
| Q |
31 |
tcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52796832 |
tcacctatttctctcttcacaacttctcttccaaaccaaacacaccctaaa |
52796882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 29109284 - 29109235
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
29109284 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccct |
29109235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 36040373 - 36040322
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36040373 |
tctcacctatttctctcttcacaacttctcttcctaaccaaacacaccctaa |
36040322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 43659088 - 43659035
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43659088 |
tctcacttatttctctcttcacaacttctcttctaaaccaaacacaccctaaaa |
43659035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 50001953 - 50002006
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
50001953 |
tctcacctatttctctctttacaacttctcttccaaaccaaacataccctaaaa |
50002006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 27516321 - 27516369
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27516321 |
acctatttctctcttctcaacttctcttccaaaccaaacacaccctaaa |
27516369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 39197953 - 39198005
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
39197953 |
tctcacctctttctctctttacaacttctcttctaaaccaaacacaccctaaa |
39198005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 14092991 - 14093038
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
14092991 |
tctcacctctttctctcttcacaacttcttttccaaaccaaacacacc |
14093038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 28686608 - 28686646
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28686608 |
tcttcacaatttctcttccaaaccaaacacaccctaaaa |
28686646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 4987010 - 4987055
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||| |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4987010 |
acctacttctctcttctcaacttctcttccaaaccaaacacaccct |
4987055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 28255262 - 28255315
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
28255262 |
tctcacctatttctctcttcacaatttctcttcttagccaaacacaccctaaaa |
28255315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 44385348 - 44385401
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||| | ||| |||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
44385348 |
tctcacctgtctctctcttcacagcttctcttccaaaccaaacaaaccctaaaa |
44385401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 50675870 - 50675922
Alignment:
| Q |
31 |
tcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaa |
83 |
Q |
| |
|
|||| ||||||| ||||| |||||| |||||||||||||||||| |||||||| |
|
|
| T |
50675870 |
tcacttatttctctcttcccaacttatcttccaaaccaaacacaacctaaaaa |
50675922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 33647287 - 33647334
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||| ||||| ||||||||| ||||||||| ||||||||||||| |
|
|
| T |
33647287 |
tctcacctctttctctcttcacaatttctcttcccaaccaaacacacc |
33647334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 52253892 - 52253939
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
52253892 |
tctcacatatttctctcttcacaacttctcttttaaaccaaacacacc |
52253939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 37516031 - 37515986
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
37516031 |
tctcacctatttctctcttcacatcttctcttcc-aaccaaacacac |
37515986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 43884946 - 43884900
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| |||||||||||| |
|
|
| T |
43884946 |
tctcacctatttctctcttcacaatttctcttcttaaccaaacacac |
43884900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 44430075 - 44430029
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
44430075 |
tctcacttatttctttcttcataacttatcttctaaaccaaacacac |
44430029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 1509346 - 1509394
Alignment:
| Q |
30 |
ctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||| ||||| |||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
1509346 |
ctcacctttttctctctttacaacttctcttcccaaccaaacaaaccct |
1509394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 18371092 - 18371136
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
||||| |||| |||||||||||||||||| | ||||||||||||| |
|
|
| T |
18371092 |
acctacttctctcttcacaacttctcttctataccaaacacaccc |
18371136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 44247724 - 44247772
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
44247724 |
acctatttctctcttcacaacttctcttctcaaccaaacatatcctaaa |
44247772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 251847 - 251793
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
251847 |
ttctcacctatttctctcttcacaacttctcttccaaaccaaacacaccctaaaa |
251793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 3711475 - 3711424
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3711475 |
tctcacctctttctctcttcacaacttctcttccaaaccaaacacaccctaa |
3711424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 7341309 - 7341355
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
7341309 |
tctcacctatttctctcttcacaatttctcttccaaaccaaacacac |
7341355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 33504521 - 33504574
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||||||||||||| |
|
|
| T |
33504521 |
ttctcacctatttctcttttcacaacttctctctcaaaccaaacacaccctaaa |
33504574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 13887250 - 13887293
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
13887250 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
13887293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 46561 - 46509
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46561 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccctaaa |
46509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 2116602 - 2116654
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2116602 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccctaaa |
2116654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 12845667 - 12845720
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
12845667 |
tctcacctatttctctcttcacaacttctcttccacaccaaacacaccataaaa |
12845720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 44061234 - 44061182
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
44061234 |
tctcacctctttctctcttcacaacttctcttccaaaccaaacacaccataaa |
44061182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 33099689 - 33099738
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
33099689 |
tctcacttatttctctcttcacaacttctcttctaaaccaaacacaccct |
33099738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 43325495 - 43325446
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
||||| |||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43325495 |
acctacttctctcttcacaacttctcttctaaaccaaacacaccctaaaa |
43325446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 3547276 - 3547236
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3547276 |
tatttctctcttcacaacttctcttccaaaccaaacacacc |
3547236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 31666209 - 31666158
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||| ||||||| |||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
31666209 |
tctcacatatttctctcttgacatcttctcttccaaaccaaacacaccctaa |
31666158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 9200286 - 9200237
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||||| |||||||||| |
|
|
| T |
9200286 |
tctcacttatttctctcttcacaacttctcttctaaacctaacacaccct |
9200237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 9579395 - 9579434
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
9579395 |
tatttctctcttcacaacttctcttctaaaccaaacacac |
9579434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 13637208 - 13637251
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
13637208 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
13637251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 13737621 - 13737664
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
13737621 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
13737664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 19439013 - 19438970
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
19439013 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
19438970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 19575162 - 19575119
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
19575162 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
19575119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 33449496 - 33449449
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| |||||| ||||| ||||||||||||||||||| |||| |
|
|
| T |
33449496 |
acctatttctctcttcataacttatcttccaaaccaaacacacactaa |
33449449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 34649700 - 34649743
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||| |||||||||||| ||||||||||| |
|
|
| T |
34649700 |
tctcacctatttctctctttacaacttctctttcaaaccaaaca |
34649743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 13884900 - 13884858
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||| |||||| |||||||| ||||||||||||||||||| |
|
|
| T |
13884900 |
tatttctctcttcataacttctcctccaaaccaaacacaccct |
13884858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 26748048 - 26748093
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
26748048 |
acctatttctctcttttcaacttctcttccgaaccaaacacaccct |
26748093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 33968884 - 33968843
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
||||| |||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
33968884 |
acctaattctctcttctcaacttctcttccaaaccaaacaca |
33968843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2822360 - 2822308
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
2822360 |
tctcacctatttctctcttcagaacttctctctaaaaccaaacacaccataaa |
2822308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 25563131 - 25563083
Alignment:
| Q |
35 |
ctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaa |
83 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| ||||||| | |||||| |
|
|
| T |
25563131 |
ctatttctctcttcacaacttctcttctaaacaaaacacaacttaaaaa |
25563083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0380 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0380
Description:
Target: scaffold0380; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 94 - 43
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
94 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccctaa |
43 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 45657779 - 45657829
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
45657779 |
ttctcacctatttctctcttcacaacttctcttccaaaccaaacacaccct |
45657829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 11315527 - 11315574
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11315527 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacacc |
11315574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 48402553 - 48402504
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
48402553 |
tctcacctatttctctcttcacaacttctcttcctaaccaaacacaccct |
48402504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 41203988 - 41204035
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41203988 |
acctatttctctcttcacaacttctcttccaaaccacacacaccctaa |
41204035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 34996836 - 34996885
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
34996836 |
tctcacctatttctctcttcacaacttctcttctataccaaacacaccct |
34996885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 20383934 - 20383978
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
20383934 |
tatttctctcttcacaacttctcttctaaaccaaacacaccctaa |
20383978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 3563120 - 3563159
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3563120 |
acctatttctctcttcacaacttctcttccaaaccaaaca |
3563159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 37545437 - 37545394
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
37545437 |
tctcacctatttctctcttcacaatttctcttccaaaccaaaca |
37545394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 40786409 - 40786456
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
40786409 |
tctcacgtatttctctcttcacaacttctcttctaaaccaaacacacc |
40786456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 10048281 - 10048326
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
10048281 |
acctatttctctcttcacaacttctcttttaaaccaaacacaccct |
10048326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 33614123 - 33614078
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33614123 |
tatttctctcttcacaacttctcttttaaaccaaacacaccctaaa |
33614078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 35396054 - 35395997
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaatta |
86 |
Q |
| |
|
|||||||||||||| |||| |||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
35396054 |
tctcacctatttctctctttacaatttctcttcataaccaaacacaccctaaatatta |
35395997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 38369881 - 38369918
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38369881 |
tcttcacaacttctctcccaaaccaaacacaccctaaa |
38369918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 41816576 - 41816531
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
41816576 |
acctatttctctcttcacaacttctcttttaaaccaaacacaccct |
41816531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 44062992 - 44063041
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||| |||||||||||||||| |
|
|
| T |
44062992 |
tctcacctatttttctcttcacaatttctcttctaaaccaaacacaccct |
44063041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 46290466 - 46290417
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||||| ||||||||| |
|
|
| T |
46290466 |
acctatttctctcttcacaacttctcttctacaccaaacagaccctaaaa |
46290417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 38319776 - 38319732
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
||||| ||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38319776 |
ttctcgcctttttctttcttcacgacttctcttccaaaccaaaca |
38319732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 19822911 - 19822958
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
19822911 |
tctcacctatttctttcttcacaatttcctttctaaaccaaacacacc |
19822958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 27542802 - 27542845
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
27542802 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
27542845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 37031248 - 37031201
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| |||| ||||||||||||| | |||||||||||||||| |
|
|
| T |
37031248 |
acctatttctctctttacaacttctcttctacaccaaacacaccctaa |
37031201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 3633012 - 3633053
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
3633012 |
acctatttctctcttcacaacttctcttctacaccaaacaca |
3633053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 22643914 - 22643869
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||||| |||||||||||||| ||| |||||||||||| |||||| |
|
|
| T |
22643914 |
tatttctctcttcacaacttcttttctaaaccaaacacatcctaaa |
22643869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 49024192 - 49024147
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| |||||||||||| ||| | |||||||||||||||| |
|
|
| T |
49024192 |
acctatttctctcttcacaacttttctcctaaaccaaacacaccct |
49024147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 18534234 - 18534202
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttc |
61 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
18534234 |
tctcacctatttctctcttcacaacttctcttc |
18534202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 23097369 - 23097421
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||| |||| |||||||||| |||| |
|
|
| T |
23097369 |
tctcacctatttctctattcacaacttccctttcaaatcaaacacaccataaa |
23097421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 45331046 - 45331014
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
45331046 |
tcttcacaacttctcttccaaatcaaacacacc |
45331014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 11447318 - 11447367
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
11447318 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccct |
11447367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 1157071 - 1157119
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
1157071 |
tctcacctatttctctcttcacaacttctcttctaaaccaaacacaccc |
1157119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 17888371 - 17888423
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
17888371 |
tctcacctatttctctcttcacaatttctcttctaaaccaaacacaccctaaa |
17888423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 27878644 - 27878593
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27878644 |
tctcacctctttctctcttcacaatttctcttccaaaccaaacacaccctaa |
27878593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 8205913 - 8205962
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
8205913 |
tctcacctatttctctcttcacaacttttctcccaaaccaaacacaccct |
8205962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 26647830 - 26647879
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||||||||||||||| |
|
|
| T |
26647830 |
tctcacctattgctcttttcacaacttctcttccaaaccaaacacaccct |
26647879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 26919415 - 26919464
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||||||||||||||| |
|
|
| T |
26919415 |
tctcacctattgctcttttcacaacttctcttccaaaccaaacacaccct |
26919464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 38503556 - 38503508
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||| |||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38503556 |
acctacttctctcttctcaacttctcttccaaaccaaacacaccctaaa |
38503508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 10830367 - 10830418
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaat |
84 |
Q |
| |
|
||||||||||||||| || | ||||||||||| ||||||||||||||||||| |
|
|
| T |
10830367 |
acctatttctttctttactatttctcttccaatccaaacacaccctaaaaat |
10830418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 9780206 - 9780160
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacacccta |
79 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9780206 |
acctatttctatcttcacaacttctcttataaaccaaacacacccta |
9780160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 37226116 - 37226169
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||| |||| ||||| ||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
37226116 |
ttcttacctgtttctctcttcgcaaattctcttccaaaccaaacacaccctaaa |
37226169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 233461 - 233417
Alignment:
| Q |
34 |
cctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||| ||||| |
|
|
| T |
233461 |
cctatttctctcttcacaacttctcttctaaaccaaacataccct |
233417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 29801700 - 29801652
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||| |||| ||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
29801700 |
acctacttctctcttctcaacttttcttccaaaccaaacacaccctaaa |
29801652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 2683731 - 2683685
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacacccta |
79 |
Q |
| |
|
|||||||| | |||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
2683731 |
acctatttatctcttcataacttctcttctaaaccaaacacacccta |
2683685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 7529720 - 7529670
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||| |||||||||| |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
7529720 |
ttcttacctatttctctctttccaacttctcttccgaaccaaacacaccct |
7529670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 19962517 - 19962475
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
19962517 |
tatttctctcttcagaacttctcttctaaaccaaacacaccct |
19962475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 8223855 - 8223814
Alignment:
| Q |
35 |
ctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
8223855 |
ctatttctctcttcacaacttctcttcttaaccaaacacacc |
8223814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 39039844 - 39039803
Alignment:
| Q |
37 |
atttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| |||||||| ||||||||| |||||||||||||||| |
|
|
| T |
39039844 |
atttctctcttcacatcttctcttctaaaccaaacacaccct |
39039803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 2167797 - 2167846
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2167797 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacaccct |
2167846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 30724636 - 30724587
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
30724636 |
tctcacctatttctctctttacaacttctcttccaaaccaaacacaccct |
30724587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 45708009 - 45707960
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
45708009 |
ttctcacatatttctctcttcacaacttctcttccaaaccaaacacaccc |
45707960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 43360315 - 43360267
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
43360315 |
acctatttctctcttcacaacttctcttccaaaccaaacataccctaaa |
43360267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 10617331 - 10617378
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10617331 |
acctatttctctcttcacaacttctcttccataccaaacacaccctaa |
10617378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 11240727 - 11240778
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||||||| ||||||||||||||| || |||||||||||||||||| |
|
|
| T |
11240727 |
tctcacctatttctctcttcacaacttctcctctaaaccaaacacaccctaa |
11240778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 26940431 - 26940478
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26940431 |
acctatttctatcttcacaacttctcttccaaaccaaacataccctaa |
26940478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 32454634 - 32454677
Alignment:
| Q |
35 |
ctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
32454634 |
ctatttctttcttcacaatttctcttccaaaccaaacacaccct |
32454677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 50372818 - 50372768
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaaa |
83 |
Q |
| |
|
|||||||||| ||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
50372818 |
acctatttctctcttcacaaattctcttctaaaccaaacacaccctaaaaa |
50372768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 23202006 - 23202051
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23202006 |
acctatttctctcttcacaacttctcttccaaaccaaacataccct |
23202051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 29733298 - 29733343
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
29733298 |
acctatttctctcttcacaacttctcttccataccaaacacaccct |
29733343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 32154131 - 32154079
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
32154131 |
tctcacctatttctctcttcacaatttctcttacaatccaaacacaccctaaa |
32154079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 45337597 - 45337545
Alignment:
| Q |
24 |
tatattctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||| |||||||||||||| |||||||||| ||||||| |||||||||||||| |
|
|
| T |
45337597 |
tatactctcacctatttctctcttcacaacatctcttctaaaccaaacacacc |
45337545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 13703276 - 13703315
Alignment:
| Q |
35 |
ctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13703276 |
ctatttctctcttcacaacttctcttccaaaccaaacaca |
13703315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 27803236 - 27803282
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||| ||||||||||||| |
|
|
| T |
27803236 |
tctcacctatttctctctttacaacttctcttctaaaccaaacacac |
27803282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 11386434 - 11386381
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
11386434 |
ttctcacatatttctctcttcacaacgtctcttctaaaccaaacacaccttaaa |
11386381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 46085566 - 46085521
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
46085566 |
acctatttctctcttcataacttctcttctaaaccaaacacaccct |
46085521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 34918458 - 34918505
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| | |||||||||||||| | |||||||||||||||||| |
|
|
| T |
34918458 |
acctatttctctattcacaacttctctcctaaaccaaacacaccctaa |
34918505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 5510393 - 5510343
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||||| | ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5510393 |
ttctcacctatttatctcttcacaatttctcttctcaaccaaacacaccct |
5510343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 12633223 - 12633269
Alignment:
| Q |
35 |
ctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||| | |||||||||| |||||||||||||||| |||||||| |
|
|
| T |
12633223 |
ctatttctctattcacaacttgtcttccaaaccaaacagaccctaaa |
12633269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 29232641 - 29232683
Alignment:
| Q |
38 |
tttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
||||| |||||||||||||||| | |||||||||||||||||| |
|
|
| T |
29232641 |
tttctctcttcacaacttctctcctaaaccaaacacaccctaa |
29232683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 47926740 - 47926790
Alignment:
| Q |
28 |
ttctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||||||||| ||| || ||||| ||| |||||||||||||||| |
|
|
| T |
47926740 |
ttctcacctatttctttattcgcatcttcttttctaaaccaaacacaccct |
47926790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 19727820 - 19727771
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
19727820 |
tctcacatatttctctcttcacaacttctcttgagaaccaaacacaccct |
19727771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 30196318 - 30196363
Alignment:
| Q |
39 |
ttctttcttcacaacttctcttccaaaccaaacacaccctaaaaat |
84 |
Q |
| |
|
|||| |||||||||||| |||||| ||||||||||||| ||||||| |
|
|
| T |
30196318 |
ttctctcttcacaacttatcttcctaaccaaacacaccataaaaat |
30196363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 36184782 - 36184815
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |
|
|
| T |
36184782 |
tcttcacaacttctcttctaaaccaaacacaccc |
36184815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 46600230 - 46600185
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| ||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
46600230 |
acctatctctctcttcataacttctcttctaaaccaaacacaccct |
46600185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 20303526 - 20303474
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||||||||||| |||| |
|
|
| T |
20303526 |
tctcacctatttctctcttcacaatttctcttgtgaaccaaacacaccataaa |
20303474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 36008 - 35962
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
36008 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacacac |
35962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 22422785 - 22422736
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
22422785 |
tctcacctatttctctcttcacaacttttcttccaaaccaaacacaccct |
22422736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 34411367 - 34411318
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34411367 |
acctatttctctcttcacaacttctcttccataccaaacacaccctaaaa |
34411318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 39843634 - 39843685
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||||| | ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
39843634 |
tctcacctatttatctctccacaacttctcttccaaaccaaacacaccctaa |
39843685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 41326593 - 41326542
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41326593 |
tctcacttatttctctcttcacaacttctcttctaaaccaaacacaccctaa |
41326542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 56051207 - 56051164
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
56051207 |
tctcacctatttctctcttcacaacttctcttccaaaccaaaca |
56051164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 53062111 - 53062065
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
53062111 |
tatttctctcttcacaacttctcttctaaaccaaacacaccctaaaa |
53062065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 470171 - 470224
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
470171 |
tctcacgtatttctctcttcacaacttctctttcaaaccaaacacatcctaaaa |
470224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 25052346 - 25052394
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25052346 |
acctatttctctcttcacaacttctcttcc-aaccaaacacaccctaaaa |
25052394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 42857569 - 42857520
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||| || ||||||||||||||| |
|
|
| T |
42857569 |
tctcacctatttctctcttcacaacttctcctcttaaccaaacacaccct |
42857520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 44937064 - 44937019
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
44937064 |
tctcacttatttctctcttcacaacttctcttctaaaccaaacaca |
44937019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 56052730 - 56052779
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
56052730 |
tctcacctatttctctcttcacaatttctcttcataaccaaacacaccct |
56052779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 11671910 - 11671958
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
11671910 |
acctatttctctcttcacaacttctcttcttaaccaaacacaccataaa |
11671958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 34413067 - 34413110
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
34413067 |
acctatttctctcttcacaacttctcttcttaaccaaacacacc |
34413110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 40547717 - 40547760
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaaca |
72 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
40547717 |
tctcacctatttctctcttcacaacttctcttcacaaccaaaca |
40547760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 8718650 - 8718616
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8718650 |
tcttcacaacttctcttccgaaccaaacacaccct |
8718616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 50381904 - 50381858
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacacccta |
79 |
Q |
| |
|
|||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
50381904 |
acctatttttctcttcacaacttctcttataaaccaaacacacccta |
50381858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 28440508 - 28440459
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||| ||||||| ||||||||| ||||||| |||||||||||||||| |
|
|
| T |
28440508 |
tctcacttatttctctcttcacaatttctcttgtaaaccaaacacaccct |
28440459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 35106276 - 35106313
Alignment:
| Q |
44 |
tcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
35106276 |
tcttcacaacttctctcctaaaccaaacacaccctaaa |
35106313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 55724425 - 55724380
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
|||||||||||||| |||||| |||||||||| |||||||||||| |
|
|
| T |
55724425 |
tctcacctatttctctcttcataacttctcttgtaaaccaaacaca |
55724380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 31913973 - 31914025
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||||||| ||||| |||||||| || |||||||||||||||||| |
|
|
| T |
31913973 |
tctcacctatttctctcttctcaacttcttctcacaaccaaacacaccctaaa |
31914025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 33633109 - 33633069
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
||||||| ||||| |||||||||||| |||||||||||||| |
|
|
| T |
33633109 |
tatttctctcttcccaacttctcttctaaaccaaacacacc |
33633069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 44022750 - 44022794
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
44022750 |
tatttctctcttcacaatttctcttcacaaccaaacacaccctaa |
44022794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 47085895 - 47085939
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
47085895 |
tatttctctcttcacaacttctcttcttaaccaaacacatcctaa |
47085939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 3207256 - 3207207
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3207256 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacataccct |
3207207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 27337233 - 27337184
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27337233 |
tctcacctatttctctcttcacaacttctcttccaaaccaaacataccct |
27337184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 37472228 - 37472180
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
37472228 |
tctcacctatttctctcttcacaacttgtcttccaaaccaaacacaccc |
37472180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 10913500 - 10913453
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
10913500 |
tctcacctatttctctcttcacaacttctcttccacaccaaacacacc |
10913453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 41322061 - 41322106
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
41322061 |
acctatttctctcttcacaacttctcttctaaaccaaacacaccct |
41322106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 38376529 - 38376577
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| |||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
38376529 |
acctatttctctcttcacaacttctcttctacaccaaacacaccctaaa |
38376577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 42578577 - 42578625
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
42578577 |
acctatttctctcttcacaacttctcttctaaaccaaacataccctaaa |
42578625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 4843460 - 4843513
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||| ||||||| ||||||||| |||||||| ||||||||||||||| |||| |
|
|
| T |
4843460 |
tctcacttatttctctcttcacaatttctcttctaaaccaaacacacccaaaaa |
4843513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 13070505 - 13070456
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
13070505 |
tctcacctatttctctcttcacaatttctcttcacaaccaaacacaccct |
13070456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 31570455 - 31570504
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| | |||||||||||||||| |
|
|
| T |
31570455 |
tctcacctatttctctcttcacgacttctctcctaaaccaaacacaccct |
31570504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 2020182 - 2020135
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacc |
76 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| ||||||| |||||| |
|
|
| T |
2020182 |
tctcacctatttctctcttcacatcttctcttctaaaccaagcacacc |
2020135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 33618097 - 33618047
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacacccta |
79 |
Q |
| |
|
|||||||||||||| |||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
33618097 |
tctcacctatttctctcttcagaacttctctttcaaactgaacacacccta |
33618047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 1777347 - 1777396
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||| ||||| |||||| || ||||||||| ||||||||||||||| |
|
|
| T |
1777347 |
tctcacctctttctctcttcataatttctcttcccaaccaaacacaccct |
1777396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 4681527 - 4681478
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccct |
78 |
Q |
| |
|
|||||||| ||||| |||||| || ||||||||| ||||||||||||||| |
|
|
| T |
4681527 |
tctcacctctttctctcttcataatttctcttcccaaccaaacacaccct |
4681478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 9225198 - 9225243
Alignment:
| Q |
36 |
tatttctttcttcacaacttctcttccaaaccaaacacaccctaaa |
81 |
Q |
| |
|
||||||| ||||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
9225198 |
tatttctctcttcccaacttctcttctaaaccaaacacaccataaa |
9225243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 39640493 - 39640452
Alignment:
| Q |
39 |
ttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
39640493 |
ttctctcttcacaacttctcttttaaaccaaacacaccctaa |
39640452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 39676273 - 39676224
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||||| |||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
39676273 |
acctatttctctctttccaacttctcttctgaaccaaacacaccctaaaa |
39676224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 13979174 - 13979214
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaa |
69 |
Q |
| |
|
||||| |||||||| ||||||||| |||||||||||||||| |
|
|
| T |
13979174 |
tctcatctatttctctcttcacaatttctcttccaaaccaa |
13979214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0459 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0459
Description:
Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 12387 - 12341
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
12387 |
tctcacctatttctctcttcacaatttctcttccaaaccaaacacac |
12341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0366 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0366
Description:
Target: scaffold0366; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 10028 - 9982
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
10028 |
tctcacctatttctctcttcacaatttctcttccaaaccaaacacac |
9982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0366; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 13694 - 13648
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacac |
75 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
13694 |
tctcacctatttctctcttcacaatttctcttccaaaccaaacacac |
13648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 44436 - 44388
Alignment:
| Q |
29 |
tctcacctatttctttcttcacaacttctcttccaaaccaaacacaccc |
77 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
44436 |
tctcacctatttctctcttcacaacttcacttctaaaccaaacacaccc |
44388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0385 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 11904 - 11950
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaa |
80 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11904 |
acctatttctctcttcacaacttctcttcc-aaccaaacacaccctaa |
11950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 1529 - 1480
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacaccctaaaa |
82 |
Q |
| |
|
|||||||| | |||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
1529 |
acctatttatctcttcacaacttctcttctaaaccaaacacaccttaaaa |
1480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 67909 - 67955
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacacacccta |
79 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||||||||||||||| |
|
|
| T |
67909 |
acctatttctctctttccaacttctcttccgaaccaaacacacccta |
67955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0287 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0287
Description:
Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 13073 - 13032
Alignment:
| Q |
33 |
acctatttctttcttcacaacttctcttccaaaccaaacaca |
74 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
13073 |
acctatttctctcttcacaacttctcttctacaccaaacaca |
13032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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