View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5298_low_8 (Length: 370)

Name: NF5298_low_8
Description: NF5298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5298_low_8
NF5298_low_8
[»] chr6 (41 HSPs)
chr6 (18-360)||(23344607-23344949)
chr6 (18-120)||(29716733-29716835)
chr6 (190-343)||(5990965-5991119)
chr6 (188-341)||(16583713-16583866)
chr6 (188-341)||(16611514-16611667)
chr6 (188-341)||(28307909-28308063)
chr6 (188-343)||(16638758-16638915)
chr6 (188-343)||(27054220-27054377)
chr6 (197-343)||(25501965-25502113)
chr6 (190-318)||(19717294-19717422)
chr6 (190-321)||(1546880-1547011)
chr6 (190-321)||(22775488-22775619)
chr6 (190-283)||(27070564-27070657)
chr6 (29-120)||(26187423-26187514)
chr6 (190-285)||(18948381-18948476)
chr6 (23-120)||(34552292-34552388)
chr6 (260-322)||(8683364-8683427)
chr6 (23-102)||(34552164-34552242)
chr6 (190-321)||(20455338-20455468)
chr6 (254-331)||(23878730-23878807)
chr6 (56-120)||(32339954-32340018)
chr6 (190-321)||(18438465-18438596)
chr6 (23-98)||(34552494-34552568)
chr6 (189-246)||(25709673-25709730)
chr6 (190-320)||(27514995-27515126)
chr6 (18-62)||(27752682-27752727)
chr6 (190-246)||(16820135-16820191)
chr6 (216-321)||(21178090-21178195)
chr6 (254-321)||(22327532-22327599)
chr6 (191-246)||(27547621-27547676)
chr6 (23-80)||(3769326-3769383)
chr6 (197-237)||(618415-618455)
chr6 (190-246)||(618475-618531)
chr6 (197-237)||(16820075-16820115)
chr6 (197-237)||(18438616-18438656)
chr6 (197-237)||(20043142-20043182)
chr6 (190-246)||(20043202-20043258)
chr6 (197-237)||(22775428-22775468)
chr6 (190-246)||(24146008-24146064)
chr6 (197-237)||(27070505-27070545)
chr6 (197-237)||(27515145-27515185)
[»] chr7 (52 HSPs)
chr7 (190-343)||(13835972-13836126)
chr7 (188-343)||(27972142-27972298)
chr7 (188-343)||(565033-565190)
chr7 (188-343)||(5205002-5205159)
chr7 (188-343)||(4943760-4943916)
chr7 (188-343)||(27438550-27438711)
chr7 (18-120)||(43492170-43492272)
chr7 (190-331)||(16268599-16268741)
chr7 (18-117)||(34299715-34299813)
chr7 (18-120)||(38988742-38988845)
chr7 (23-85)||(7432677-7432739)
chr7 (18-116)||(8237986-8238083)
chr7 (189-246)||(13482565-13482622)
chr7 (190-318)||(34135460-34135588)
chr7 (190-321)||(15769280-15769411)
chr7 (201-325)||(3426985-3427110)
chr7 (29-85)||(43439152-43439208)
chr7 (65-120)||(27123357-27123412)
chr7 (265-343)||(38423460-38423539)
chr7 (254-343)||(29026727-29026817)
chr7 (31-120)||(35496541-35496630)
chr7 (193-322)||(16485443-16485573)
chr7 (29-85)||(44452045-44452101)
chr7 (190-321)||(843390-843521)
chr7 (190-321)||(850566-850697)
chr7 (190-321)||(1208570-1208701)
chr7 (65-120)||(44537424-44537479)
chr7 (50-120)||(5482377-5482447)
chr7 (49-103)||(24610824-24610878)
chr7 (23-120)||(3267579-3267675)
chr7 (188-245)||(29026840-29026897)
chr7 (28-120)||(34681738-34681830)
chr7 (32-96)||(25036957-25037021)
chr7 (49-120)||(17255371-17255442)
chr7 (196-283)||(16267906-16267993)
chr7 (190-246)||(12588564-12588620)
chr7 (49-101)||(26871837-26871889)
chr7 (191-246)||(1890939-1890994)
chr7 (191-246)||(9472033-9472088)
chr7 (191-246)||(16390798-16390853)
chr7 (66-120)||(17157737-17157791)
chr7 (31-120)||(35731336-35731424)
chr7 (23-97)||(38362296-38362369)
chr7 (213-283)||(1956304-1956374)
chr7 (190-246)||(8815333-8815389)
chr7 (197-237)||(8815409-8815449)
chr7 (197-237)||(23881860-23881900)
chr7 (72-120)||(28663107-28663155)
chr7 (88-116)||(41731572-41731600)
chr7 (197-237)||(42633514-42633554)
chr7 (190-246)||(42633574-42633630)
chr7 (64-120)||(47754476-47754532)
[»] chr2 (34 HSPs)
chr2 (190-343)||(20615286-20615440)
chr2 (194-343)||(35143174-35143323)
chr2 (188-343)||(25499154-25499309)
chr2 (190-343)||(15948512-15948666)
chr2 (190-343)||(42569988-42570142)
chr2 (188-343)||(21855430-21855587)
chr2 (188-343)||(3761885-3762041)
chr2 (188-343)||(16278050-16278211)
chr2 (188-333)||(21117604-21117750)
chr2 (29-120)||(431602-431693)
chr2 (18-92)||(28695609-28695683)
chr2 (190-318)||(20277439-20277567)
chr2 (190-321)||(29588012-29588143)
chr2 (254-343)||(24289668-24289759)
chr2 (33-121)||(11385503-11385591)
chr2 (190-246)||(24289786-24289842)
chr2 (23-75)||(15806054-15806105)
chr2 (18-105)||(30523039-30523125)
chr2 (21-83)||(12205558-12205620)
chr2 (18-120)||(12848441-12848542)
chr2 (34-86)||(18043892-18043943)
chr2 (190-283)||(24694098-24694191)
chr2 (21-80)||(6083911-6083969)
chr2 (191-246)||(26721744-26721799)
chr2 (29-120)||(32787551-32787641)
chr2 (191-246)||(34531919-34531974)
chr2 (18-120)||(565662-565762)
chr2 (29-91)||(9049148-9049209)
chr2 (18-80)||(24389632-24389693)
chr2 (49-91)||(33898643-33898685)
chr2 (23-120)||(6411343-6411439)
chr2 (84-121)||(11610512-11610549)
chr2 (57-106)||(40874890-40874939)
chr2 (49-89)||(11364704-11364744)
[»] chr5 (47 HSPs)
chr5 (194-343)||(24960660-24960809)
chr5 (189-343)||(21863296-21863452)
chr5 (190-343)||(28848368-28848522)
chr5 (188-343)||(12176442-12176599)
chr5 (188-343)||(21991674-21991833)
chr5 (188-343)||(26085205-26085362)
chr5 (188-341)||(27229476-27229630)
chr5 (189-341)||(33840780-33840935)
chr5 (188-343)||(20381555-20381715)
chr5 (188-343)||(11809287-11809446)
chr5 (190-321)||(25530249-25530380)
chr5 (188-343)||(23640692-23640853)
chr5 (29-120)||(10410497-10410588)
chr5 (188-343)||(23832031-23832194)
chr5 (193-321)||(21692610-21692738)
chr5 (191-324)||(37582460-37582594)
chr5 (190-333)||(22953988-22954131)
chr5 (18-100)||(25767512-25767595)
chr5 (190-285)||(29898361-29898456)
chr5 (51-115)||(5758630-5758694)
chr5 (190-318)||(36451903-36452031)
chr5 (21-92)||(16636660-16636730)
chr5 (188-246)||(349586-349644)
chr5 (38-120)||(28639608-28639690)
chr5 (29-120)||(31672459-31672549)
chr5 (29-99)||(17774272-17774341)
chr5 (190-285)||(20095955-20096050)
chr5 (66-120)||(29342401-29342455)
chr5 (67-120)||(30501107-30501161)
chr5 (67-120)||(30541450-30541504)
chr5 (189-246)||(20375005-20375062)
chr5 (190-246)||(7257267-7257323)
chr5 (190-246)||(7791728-7791784)
chr5 (191-246)||(5437603-5437658)
chr5 (191-246)||(11941800-11941855)
chr5 (65-120)||(18229570-18229625)
chr5 (33-120)||(19692775-19692861)
chr5 (49-92)||(27794856-27794899)
chr5 (191-246)||(31523035-31523090)
chr5 (18-100)||(43000785-43000868)
chr5 (18-96)||(21259411-21259488)
chr5 (21-70)||(36609150-36609198)
chr5 (197-237)||(1803103-1803143)
chr5 (197-237)||(12390473-12390513)
chr5 (190-246)||(12390533-12390589)
chr5 (197-237)||(20374946-20374986)
chr5 (88-120)||(39177781-39177813)
[»] chr3 (65 HSPs)
chr3 (194-343)||(41002840-41002989)
chr3 (194-343)||(41011621-41011770)
chr3 (188-343)||(17930317-17930473)
chr3 (188-343)||(10718135-10718293)
chr3 (189-332)||(8201014-8201158)
chr3 (189-343)||(9550680-9550836)
chr3 (188-341)||(25268068-25268223)
chr3 (188-343)||(15680508-15680666)
chr3 (190-343)||(14662752-14662906)
chr3 (193-321)||(15532437-15532565)
chr3 (190-321)||(15624498-15624629)
chr3 (18-120)||(24313587-24313688)
chr3 (190-321)||(8609826-8609957)
chr3 (190-321)||(14883796-14883928)
chr3 (190-321)||(3408640-3408771)
chr3 (18-120)||(14146136-14146237)
chr3 (190-336)||(12475398-12475544)
chr3 (190-318)||(12553855-12553983)
chr3 (32-91)||(20821353-20821412)
chr3 (23-120)||(25317846-25317942)
chr3 (201-325)||(3681343-3681468)
chr3 (190-318)||(13108095-13108223)
chr3 (190-321)||(11184962-11185094)
chr3 (190-281)||(71804-71895)
chr3 (188-246)||(6960951-6961009)
chr3 (190-321)||(14422401-14422532)
chr3 (201-325)||(30017899-30018024)
chr3 (190-318)||(30092165-30092293)
chr3 (190-318)||(26382593-26382721)
chr3 (18-93)||(40614262-40614336)
chr3 (18-120)||(48551076-48551175)
chr3 (190-319)||(21612769-21612898)
chr3 (190-283)||(23284446-23284539)
chr3 (18-85)||(37359502-37359570)
chr3 (29-101)||(46725704-46725775)
chr3 (29-92)||(3026981-3027044)
chr3 (18-69)||(9342672-9342723)
chr3 (18-120)||(11623440-11623543)
chr3 (29-92)||(39651963-39652026)
chr3 (18-80)||(33072120-33072181)
chr3 (189-246)||(18904722-18904779)
chr3 (18-83)||(22853906-22853971)
chr3 (191-246)||(4452458-4452513)
chr3 (191-246)||(27561334-27561389)
chr3 (29-68)||(29612067-29612106)
chr3 (191-246)||(37258233-37258288)
chr3 (191-245)||(15581630-15581684)
chr3 (196-233)||(3240230-3240267)
chr3 (189-246)||(15707156-15707213)
chr3 (87-120)||(39122193-39122226)
chr3 (84-121)||(44291332-44291369)
chr3 (197-237)||(71914-71954)
chr3 (197-237)||(3408790-3408830)
chr3 (190-246)||(6199308-6199364)
chr3 (197-237)||(6199384-6199424)
chr3 (197-237)||(8609976-8610016)
chr3 (190-246)||(8621349-8621405)
chr3 (197-237)||(8621425-8621465)
chr3 (197-237)||(8809484-8809524)
chr3 (197-237)||(11185114-11185154)
chr3 (197-237)||(14422552-14422592)
chr3 (197-237)||(23284387-23284427)
chr3 (18-70)||(45757965-45758016)
chr3 (197-237)||(46395745-46395785)
chr3 (190-246)||(46395805-46395861)
[»] chr1 (39 HSPs)
chr1 (194-343)||(31544512-31544661)
chr1 (188-343)||(13468255-13468410)
chr1 (188-343)||(13473249-13473404)
chr1 (192-343)||(31556617-31556770)
chr1 (189-343)||(2389138-2389294)
chr1 (190-322)||(35073215-35073349)
chr1 (23-120)||(49478854-49478950)
chr1 (190-331)||(6200098-6200239)
chr1 (18-101)||(48947240-48947322)
chr1 (19-120)||(4040930-4041029)
chr1 (193-339)||(19372824-19372970)
chr1 (18-100)||(38172681-38172762)
chr1 (18-120)||(39973928-39974029)
chr1 (18-83)||(9931811-9931875)
chr1 (32-97)||(37188521-37188585)
chr1 (23-116)||(40286899-40286990)
chr1 (18-82)||(40053329-40053392)
chr1 (23-70)||(7231956-7232003)
chr1 (18-97)||(24075135-24075214)
chr1 (29-120)||(39807570-39807661)
chr1 (190-321)||(1959489-1959620)
chr1 (19-92)||(759223-759296)
chr1 (18-120)||(16113955-16114058)
chr1 (49-102)||(33791726-33791779)
chr1 (29-68)||(31807800-31807839)
chr1 (18-116)||(48859-48956)
chr1 (190-281)||(2338454-2338545)
chr1 (29-70)||(27934747-27934788)
chr1 (18-83)||(32787261-32787326)
chr1 (65-120)||(43396983-43397038)
chr1 (18-92)||(35259043-35259116)
chr1 (29-83)||(46123955-46124008)
chr1 (189-246)||(13456500-13456557)
chr1 (18-67)||(31043037-31043085)
chr1 (84-121)||(48282983-48283020)
chr1 (197-237)||(1959640-1959680)
chr1 (301-337)||(9297172-9297208)
chr1 (197-237)||(14816090-14816130)
chr1 (197-237)||(19372992-19373032)
[»] scaffold0605 (1 HSPs)
scaffold0605 (188-343)||(4128-4284)
[»] scaffold1691 (1 HSPs)
scaffold1691 (190-343)||(309-463)
[»] chr8 (40 HSPs)
chr8 (190-343)||(17678407-17678561)
chr8 (18-92)||(1445130-1445204)
chr8 (192-343)||(39841061-39841212)
chr8 (29-120)||(34722748-34722837)
chr8 (193-333)||(6667429-6667571)
chr8 (190-322)||(32003844-32003978)
chr8 (39-120)||(32133664-32133745)
chr8 (18-120)||(1876451-1876552)
chr8 (23-120)||(14016836-14016932)
chr8 (23-120)||(36907841-36907937)
chr8 (190-271)||(20731124-20731205)
chr8 (20-120)||(31844186-31844286)
chr8 (190-321)||(20746328-20746459)
chr8 (18-120)||(12002303-12002404)
chr8 (38-120)||(41959952-41960032)
chr8 (32-97)||(8350203-8350268)
chr8 (23-92)||(35501064-35501133)
chr8 (32-96)||(38047602-38047666)
chr8 (21-120)||(39594458-39594556)
chr8 (190-322)||(22159446-22159579)
chr8 (189-321)||(24702285-24702419)
chr8 (192-321)||(25855626-25855755)
chr8 (49-116)||(30486675-30486743)
chr8 (65-120)||(42636334-42636389)
chr8 (18-102)||(8349739-8349823)
chr8 (18-58)||(14453717-14453757)
chr8 (73-120)||(16723175-16723222)
chr8 (191-246)||(16771044-16771099)
chr8 (49-120)||(24733238-24733309)
chr8 (31-120)||(27801194-27801283)
chr8 (189-246)||(19846886-19846943)
chr8 (32-120)||(44024062-44024149)
chr8 (18-83)||(44220716-44220780)
chr8 (197-237)||(20746479-20746519)
chr8 (197-237)||(21478434-21478474)
chr8 (190-246)||(21478494-21478550)
chr8 (197-237)||(22091700-22091740)
chr8 (197-237)||(22159387-22159427)
chr8 (49-105)||(26014738-26014794)
chr8 (197-237)||(32003998-32004038)
[»] chr4 (50 HSPs)
chr4 (190-343)||(8098570-8098724)
chr4 (21-120)||(21687554-21687653)
chr4 (188-343)||(26216049-26216207)
chr4 (188-343)||(33183205-33183363)
chr4 (190-331)||(15895488-15895629)
chr4 (190-325)||(3361342-3361478)
chr4 (190-322)||(20558015-20558149)
chr4 (190-333)||(3831221-3831366)
chr4 (18-85)||(35153287-35153354)
chr4 (190-321)||(15570113-15570244)
chr4 (190-321)||(15574241-15574372)
chr4 (29-120)||(32175478-32175569)
chr4 (18-120)||(40252692-40252792)
chr4 (18-120)||(49421863-49421965)
chr4 (23-120)||(53261599-53261695)
chr4 (190-321)||(3384845-3384976)
chr4 (190-333)||(16365785-16365928)
chr4 (29-120)||(20022237-20022327)
chr4 (18-100)||(39724055-39724137)
chr4 (201-331)||(39531546-39531675)
chr4 (23-99)||(3178996-3179072)
chr4 (188-246)||(22144044-22144102)
chr4 (190-284)||(9188459-9188553)
chr4 (190-246)||(3362119-3362175)
chr4 (190-246)||(3362816-3362872)
chr4 (190-321)||(14922368-14922500)
chr4 (23-70)||(38682008-38682055)
chr4 (45-100)||(46010552-46010607)
chr4 (53-120)||(51291156-51291223)
chr4 (18-105)||(53622339-53622426)
chr4 (66-120)||(7628042-7628096)
chr4 (31-116)||(7852516-7852601)
chr4 (191-321)||(16723173-16723303)
chr4 (190-246)||(12616569-12616625)
chr4 (29-69)||(23614662-23614702)
chr4 (29-100)||(49795191-49795262)
chr4 (49-104)||(36876042-36876097)
chr4 (23-120)||(39767248-39767345)
chr4 (196-233)||(3830431-3830468)
chr4 (67-120)||(24175367-24175420)
chr4 (79-120)||(45900117-45900158)
chr4 (197-237)||(3361498-3361538)
chr4 (197-237)||(3362195-3362235)
chr4 (197-237)||(3362892-3362932)
chr4 (197-237)||(3384785-3384825)
chr4 (21-73)||(10505963-10506015)
chr4 (197-237)||(14922520-14922560)
chr4 (190-246)||(22709038-22709094)
chr4 (197-237)||(22709114-22709154)
chr4 (85-121)||(50086736-50086772)
[»] scaffold0083 (1 HSPs)
scaffold0083 (188-343)||(20123-20279)
[»] scaffold0023 (1 HSPs)
scaffold0023 (188-344)||(141763-141919)
[»] scaffold0389 (1 HSPs)
scaffold0389 (188-343)||(4282-4439)
[»] scaffold0044 (1 HSPs)
scaffold0044 (189-343)||(69958-70117)
[»] scaffold0016 (1 HSPs)
scaffold0016 (189-343)||(20168-20322)
[»] scaffold0441 (1 HSPs)
scaffold0441 (190-333)||(7996-8140)
[»] scaffold0582 (1 HSPs)
scaffold0582 (190-331)||(3592-3734)
[»] scaffold0068 (1 HSPs)
scaffold0068 (193-321)||(21172-21300)
[»] scaffold1661 (1 HSPs)
scaffold1661 (190-336)||(1115-1261)
[»] scaffold0029 (3 HSPs)
scaffold0029 (190-336)||(89605-89751)
scaffold0029 (191-333)||(8026-8170)
scaffold0029 (191-246)||(31892-31947)
[»] scaffold0357 (2 HSPs)
scaffold0357 (190-331)||(10409-10550)
scaffold0357 (197-237)||(10570-10610)
[»] scaffold0125 (1 HSPs)
scaffold0125 (190-331)||(13280-13422)
[»] scaffold0019 (2 HSPs)
scaffold0019 (190-321)||(15923-16054)
scaffold0019 (197-237)||(15863-15903)
[»] scaffold0132 (2 HSPs)
scaffold0132 (190-321)||(32555-32686)
scaffold0132 (190-285)||(27611-27706)
[»] scaffold0027 (1 HSPs)
scaffold0027 (254-343)||(58992-59082)
[»] scaffold0320 (1 HSPs)
scaffold0320 (190-318)||(2649-2777)
[»] scaffold0014 (3 HSPs)
scaffold0014 (190-319)||(1569-1698)
scaffold0014 (190-321)||(182523-182654)
scaffold0014 (197-237)||(182463-182503)
[»] scaffold0306 (1 HSPs)
scaffold0306 (190-321)||(19261-19392)
[»] scaffold0243 (1 HSPs)
scaffold0243 (190-321)||(18524-18655)
[»] scaffold0183 (1 HSPs)
scaffold0183 (190-321)||(33348-33478)
[»] scaffold0551 (1 HSPs)
scaffold0551 (197-321)||(1612-1736)
[»] scaffold0327 (1 HSPs)
scaffold0327 (190-331)||(15756-15897)
[»] scaffold0138 (2 HSPs)
scaffold0138 (190-333)||(1721-1865)
scaffold0138 (197-237)||(1885-1925)
[»] scaffold0004 (1 HSPs)
scaffold0004 (190-331)||(190600-190741)
[»] scaffold0114 (2 HSPs)
scaffold0114 (190-321)||(30018-30149)
scaffold0114 (197-237)||(29958-29998)
[»] scaffold0031 (3 HSPs)
scaffold0031 (190-321)||(27706-27837)
scaffold0031 (87-120)||(77342-77375)
scaffold0031 (197-237)||(27646-27686)
[»] scaffold0010 (1 HSPs)
scaffold0010 (18-75)||(26737-26793)
[»] scaffold1837 (1 HSPs)
scaffold1837 (191-246)||(1160-1215)
[»] scaffold0094 (1 HSPs)
scaffold0094 (191-246)||(32730-32785)
[»] scaffold0932 (2 HSPs)
scaffold0932 (196-271)||(3742-3817)
scaffold0932 (197-237)||(3141-3181)
[»] scaffold0005 (1 HSPs)
scaffold0005 (190-285)||(303080-303175)
[»] scaffold0160 (1 HSPs)
scaffold0160 (189-246)||(33048-33105)
[»] scaffold0009 (1 HSPs)
scaffold0009 (197-230)||(155137-155170)
[»] scaffold0362 (1 HSPs)
scaffold0362 (254-321)||(20-87)
[»] scaffold0036 (1 HSPs)
scaffold0036 (65-125)||(62488-62548)


Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 360
Target Start/End: Original strand, 23344607 - 23344949
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23344607 atgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcataaccagtgccccgggggcactcgttaac 23344706  T
Q  118 attccttatcttttgcatagacgcccttgtgggttcaaactatcacgataatcannnnnnnnnnnnnnnaatatgtctctaacttttgcatggatcgccc 217  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||               ||||||||||||||||||||||||| |||||    
T  23344707 attccttatcttttgcatagacgcccttgtgggttcaacctatcacgataatcatttttcattttttttaatatgtctctaacttttgcatggaccgccc 23344806  T
Q  218 tttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttttattttcacaaagtatttcttgac 317  Q
    |||||||||||||||||||||||||||||       ||||||| |||||||||| |||| |||||||| | ||||||||||| |||||||||||||||||    
T  23344807 tttcaggttttcagtctatcgagacgctctttttttcctaagctgccttttcaggtttgtgacttatcgggctttttattttaacaaagtatttcttgac 23344906  T
Q  318 tgcattggtattcacaagacatacaatcggcttttctcctatg 360  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23344907 tgcattggtattcacaagacatacaatcggcttttctcctatg 23344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 29716835 - 29716733
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29716835 atgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccatttaaagtccttaaccagtgccccgggggcactagttaac 29716736  T
Q  118 att 120  Q
    |||    
T  29716735 att 29716733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 5991119 - 5990965
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||       |||||||||| ||||||| ||||||||||||| ||     
T  5991119 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagatgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 5991020  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  5991019 tttttcattttaacaaagtatttcttgactgcatcggtatttacaagacatacaa 5990965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 16583866 - 16583713
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| |||||||||||||      
T  16583866 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttt-cctaagccgccttttcaggtttgcgacttatcga 16583768  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||    
T  16583767 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatac 16583713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 341
Target Start/End: Original strand, 16611514 - 16611667
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| |||||||||||||      
T  16611514 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttt-cctaagccgccttttcaggtttgcgacttatcga 16611612  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||    
T  16611613 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatac 16611667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 28308063 - 28307909
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    ||||||| |||||||||||||||| ||||||||  ||||||||||| ||||||| ||||       |||||||||||||||||||||||||||||||| |    
T  28308063 atatgtcgctaacttttgcatggaccgcccttttgggttttcagtccatcgagatgctcttttttgcctaagccgccttttcagatttgcgacttatcga 28307964  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
    |  |||| ||||| |||||||||||||||||||||| |||||||| | |||||||    
T  28307963 gctttttcattttaacaaagtatttcttgactgcatcggtattcataggacatac 28307909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 16638915 - 16638758
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||        |||| ||||||||||||| |||||||||||||     
T  16638915 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttgcctacgccgccttttcaggtttgcgacttatcg 16638816  T
Q  287 gacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      |||||| ||||| |||||||||||||||||||||| |||||||||| ||| |||||    
T  16638815 agctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacttacaa 16638758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 27054220 - 27054377
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  27054220 atatgtctctaacttttgcatgggccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 27054319  T
Q  287 gacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      |||||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  27054320 agctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 27054377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 343
Target Start/End: Original strand, 25501965 - 25502113
Alignment:
Q  197 taacttttgcatggatcgcc-ctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-agacttttt 294  Q
    ||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| ||  |||||    
T  25501965 taacttttgtatggaccgcctctttcgggttttcagtcaatcgagacgctctttttttcctaagccgccttttcaggtttgcgacttatcgagctttttt 25502064  T
Q  295 attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||||| |||||||||||||| |||||||  ||||||||  |||||||||    
T  25502065 attttaacaaagtatttcttaactgcatcagtattcaccggacatacaa 25502113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 19717422 - 19717294
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  19717422 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 19717324  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  19717323 cttttatatttgacagagtatttcttgact 19717294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 1547011 - 1546880
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||| ||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  1547011 atgtctctaacttttgcctggaccgcccttttgggtttgcagtccaccgagacgctcaatttttcctaagccgccttttcaggtttgcgacttatc-gag 1546913  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  1546912 cttttatgtttgacagagtatttcttgactgca 1546880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 22775488 - 22775619
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||| | ||||||||||||| ||     
T  22775488 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcgggtttgcgacttatc-gag 22775586  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  22775587 cttttatgtttgacagagtatttcttgactgca 22775619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 27070564 - 27070657
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta 283  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||    
T  27070564 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgactta 27070657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 26187514 - 26187423
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||| || || ||||||||||||||||| ||||||| ||| |||||||||| ||||| |||||   |||||||||| |||||||||    
T  26187514 ttcaattttcgatacattttattacacaaactttcataaaaaattaacatttaaagtccttaatcagtgtttcgggggcactagttaacatt 26187423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 18948381 - 18948476
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||| ||| |||||| | || ||||||||| ||||||||||||||||||||||||       ||||||||||||||| || |||||||||||||    
T  18948381 atgtctttaatttttgcctagaccgccctttcgggttttcagtctatcgagacgctcatttttgcctaagccgcctttttaggtttgcgacttatc 18948476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 34552388 - 34552292
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| |||||||||||||||||| |||||| || ||||||||  |||||||||| |||||| |||| |||||||||||| |||||||||    
T  34552388 aaagttttcaatttccaatgcactttattacac-aactttcataaaaaagttgtcatttaaagtccttaacgagtg-cccgggggcactagttaacatt 34552292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 8683364 - 8683427
Alignment:
Q  260 ccgccttttcagatttgcgacttatc-agactttttattttcacaaagtatttcttgactgcat 322  Q
    |||||||||||| ||||||||||||| || |||||| |||| ||||||||||||||||||||||    
T  8683364 ccgccttttcaggtttgcgacttatcgagcctttttttttttacaaagtatttcttgactgcat 8683427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 34552242 - 34552164
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccg 102  Q
    ||||| |||||||||||||||| ||||||||| || |||| || |||| ||| |||||||||| ||||||||||||||||    
T  34552242 aaagttttcaattttcaatgcattttattacataa-ctttcattaaaaattatcatttaaagtccttaaccagtgccccg 34552164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 20455338 - 20455468
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| ||||  |||||||| ||||| ||||| | ||||||||||       |||||||| ||||||||| |||||||||||||   |    
T  20455338 atgtctctaatttttgcctggactgccctttcgggttt-cagtccaccgagacgctcatttttgcctaagccaccttttcaggtttgcgacttatcgagc 20455436  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  20455437 ttttatttttgacagagtatttcttgactgca 20455468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 23878730 - 23878807
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatcagactttttattttcacaaagtatttcttgactgcattggtattca 331  Q
    ||||||||||| |||||| |||||||||||||   |||||  |||| ||||||||||||||||||||| ||| |||||    
T  23878730 cctaagccgccatttcaggtttgcgacttatctagcttttatttttgacaaagtatttcttgactgcactggcattca 23878807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 32339954 - 32340018
Alignment:
Q  56 aaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||| |||||||||||| |||||| || |||| |||||||||||||| |||| |||||||||    
T  32339954 aaactttgataaaaagttactatttaatgtccttagccagtgccccggggacactagttaacatt 32340018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 18438596 - 18438465
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| | || ||| ||||| || |||||||||| ||||||||||       |||||||||||||||||  ||||||||||||| ||     
T  18438596 atgtctctaatttttgcctagaacgcactttcgggatttcagtctaccgagacgctcatttttgcctaagccgccttttcaagtttgcgacttatc-gag 18438498  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
      ||||| ||| ||| |||||||||||||||||    
T  18438497 catttatgtttgacagagtatttcttgactgca 18438465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 34552568 - 34552494
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgc 98  Q
    ||||| || ||||||||||| |||||| ||||||| |||| |||||||||| ||||||||||| |||||| |||||    
T  34552568 aaagtttttaattttcaatgtactttaatacacaa-ctttcataaaaagttgccatttaaagttcttaacaagtgc 34552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 25709730 - 25709673
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  25709730 tatgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 25709673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 320
Target Start/End: Complemental strand, 27515126 - 27514995
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgcctttt--cagatttgcgacttatcag 287  Q
    |||||||||| |||||| |||| ||||||||| |||||| |||| | ||||||||||       |||||||||||||||  ||| ||||||||||||| |    
T  27515126 atgtctctaa-ttttgcctggaccgccctttcgggtttttagtccaccgagacgctcatttttgcctaagccgccttttttcaggtttgcgacttatc-g 27515029  T
Q  288 actttttat-tttcacaaagtatttcttgactgc 320  Q
    |  |||||| ||| ||| ||||||||||||||||    
T  27515028 agcttttatgtttgacagagtatttcttgactgc 27514995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 27752682 - 27752727
Alignment:
Q  18 atgtcaaagtgttcaattttc-aatgcactttattacacaaacttt 62  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  27752682 atgtcaaagttttcaattttctaatgcactttattacacaaacttt 27752727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 16820135 - 16820191
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| |||||||| |||||||||||| | ||||||||||    
T  16820135 atgtctctaacttttgcccggaccgcccttttaggttttcagtccaccgagacgctc 16820191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 21178195 - 21178090
Alignment:
Q  216 cctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttttattttcacaaagtatttcttg 315  Q
    |||||| ||||||||||  ||||||| ||||       |||||||||  |||||||||||||||||||||   |||||  |||| |||||||||| ||||    
T  21178195 cctttcgggttttcagttcatcgagatgctcattttagcctaagccgttttttcagatttgcgacttatcgagcttttatttttgacaaagtattgcttg 21178096  T
Q  316 actgca 321  Q
    ||||||    
T  21178095 actgca 21178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 22327599 - 22327532
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatcagactttttattttcacaaagtatttcttgactgca 321  Q
    ||||||| |||||||||| |||||||||||||   |||||  |||| ||| |||||||||||||||||    
T  22327599 cctaagctgccttttcaggtttgcgacttatcgagcttttatttttgacagagtatttcttgactgca 22327532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 27547676 - 27547621
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  27547676 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 27547621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 3769383 - 3769326
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccattt 80  Q
    ||||| ||||||||||||| ||  | ||||||||||||||||||||| ||||| ||||    
T  3769383 aaagttttcaattttcaattcaaatgattacacaaacttttataaaatgttactattt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 618415 - 618455
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  618415 taacttttgcatagatcgccctttcgggttttcaatctatc 618455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 618475 - 618531
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  618475 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 618531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 16820075 - 16820115
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  16820075 taacttttgcatagatcgccctttcgggttttcaatctatc 16820115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 18438656 - 18438616
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  18438656 taacttttgcatagatcgccctttcgggttttcaatctatc 18438616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 20043142 - 20043182
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  20043142 taacttttgcatagatcgccctttcgggttttcaatctatc 20043182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 20043202 - 20043258
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  20043202 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 20043258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 22775428 - 22775468
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  22775428 taacttttgcatagatcgccctttcgggttttcaatctatc 22775468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 24146008 - 24146064
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  24146008 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 24146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 27070505 - 27070545
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| ||||||||||| ||||||||| ||||||    
T  27070505 taacttttgcatagatcgcccttttaggttttcaatctatc 27070545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 27515185 - 27515145
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  27515185 taacttttgcatagatcgccctttcgggttttcaatctatc 27515145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 13836126 - 13835972
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  13836126 atgtctctaacttttgcatggatcgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 13836027  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  13836026 tttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 13835972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 27972142 - 27972298
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       ||||||||||| |||||| |||| |||||||| |    
T  27972142 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctcttttttgcctaagccgccctttcaggtttgtgacttatcga 27972241  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |  |||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  27972242 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 27972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 565033 - 565190
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc-nnnnnnncctaagccgccttttcagatttgcgacttatc- 285  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  565033 atatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 565132  T
Q  286 agactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||  |||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  565133 agctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 5205002 - 5205159
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  5205002 atatgtctctaacttttgcatgggccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 5205101  T
Q  287 gacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  5205102 agctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 5205159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 4943760 - 4943916
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||||||||       |||||||||||||||||| ||||||||||||| |    
T  4943760 atatgtctctaacttttgcatcgaccgccctttcgggttttcagtccatcaagacgctcttttttgcctaagccgccttttcaggtttgcgacttatcga 4943859  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |  |||| ||| | |||||||||||||||||||||| |||||| ||| |||||||||    
T  4943860 gctttttcattctaacaaagtatttcttgactgcatcggtatttacaggacatacaa 4943916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 27438711 - 27438550
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-----cctaagccgccttttcagatttgcgactt 282  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||            |||||||||||||||||| ||||||||||    
T  27438711 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttttttgcctaagccgccttttcaggtttgcgactt 27438612  T
Q  283 atcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  27438611 atcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 27438550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 43492272 - 43492170
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||| | | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||   ||||| ||||||||||| |||||| ||||||    
T  43492272 atgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaagttaccatttaaatcccttaatcagtgccccggaggcactagttaac 43492173  T
Q  118 att 120  Q
    |||    
T  43492172 att 43492170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 16268599 - 16268741
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| || ||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  16268599 atgtctctaatttctgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 16268698  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattca 331  Q
     ||  | |||| ||||||||||||||||||||||||| |||||    
T  16268699 tttcattttttgacaaagtatttcttgactgcattggcattca 16268741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 34299813 - 34299715
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| |||||||| ||| |||||  |||||||||||||| |||||||||||| |||||| || |||||||| ||||||||||||||| ||||||    
T  34299813 atgtcaaagttttcaatttacaaagcactg-attacacaaactttcataaaaagttactatttaaggtccttaaccaatgccccgggggcactagttaac 34299715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 38988742 - 38988845
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaac-ttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    |||| |||||||| ||||| ||||||||||||||||| |||  ||||||||||||||| |||||||||||||||| |||||| |||  |||||| |||||    
T  38988742 atgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatcatttaaagtgcttaatcagtgctccgaaggcacttgttaa 38988841  T
Q  117 catt 120  Q
    ||||    
T  38988842 catt 38988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 7432677 - 7432739
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagt 85  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7432677 aaagtttttaattttcaatgcactttattgcacaaacttttataaaaagttaccatttaaagt 7432739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 8237986 - 8238083
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    |||||||||| |||| |||||||||||||  |||||||||||||| ||||||||||||||||||| || |||||| | |||||||| |||||| |||||    
T  8237986 atgtcaaagttttcatttttcaatgcactg-attacacaaactttcataaaaagttaccatttaaggtccttaactaatgccccggaggcactagttaa 8238083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 13482565 - 13482622
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  13482565 tatgtctctaacttttgcatggaccgccctttcaggttttcagtccatcgagacgctc 13482622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 34135460 - 34135588
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  34135460 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 34135558  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  34135559 cttttatatttgacagagtatttcttgact 34135588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 15769280 - 15769411
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||| ||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  15769280 atgtctctaacttttgcctggaccgcccttttgggtttgcagtccaccgagacgctcaatttttcctaagccgccttttcaggtttgcgacttatc-gag 15769378  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  15769379 cttttatgtttgacagagtatttcttgactgca 15769411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 325
Target Start/End: Original strand, 3426985 - 3427110
Alignment:
Q  201 ttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt-ttatttt 299  Q
    |||||| |||| ||||||||| ||||||||| | | | ||||||||       |||||||||||||||||| ||||||||||||| | ||||  | ||||    
T  3426985 ttttgcctggaccgccctttcgggttttcagaccaccaagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgggctttcatttttt 3427084  T
Q  300 cacaaagtatttcttgactgcattgg 325  Q
     |||||||||||||||||||||||||    
T  3427085 gacaaagtatttcttgactgcattgg 3427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 43439152 - 43439208
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagt 85  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  43439152 ttcaattttcaatgcactttattacccaaacttttaaaaaaagttatcatttaaagt 43439208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 27123357 - 27123412
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27123357 taaaaacttaccatttaaagtgcttaaagagtgccccgggggcactcgttaacatt 27123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 343
Target Start/End: Complemental strand, 38423539 - 38423460
Alignment:
Q  265 ttttcagatttgcgacttatcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||||||| |||||||||||||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  38423539 ttttcaggtttgcgacttatcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 38423460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 29026817 - 29026727
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||||||||||||||| ||||| |||||||   |||||| ||||| ||||||||||||||||||||||  |||||| || |||||||||    
T  29026817 cctaagccgccttttcaggtttgcaacttatcgagctttttcattttaacaaagtatttcttgactgcatcagtattctcaggacatacaa 29026727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 35496630 - 35496541
Alignment:
Q  31 caattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||| || |||||||||  ||| || ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  35496630 caattttcaatgca-ttcattacacaatttttcattaaaaacttaccatttaaagtgtttaaagagtgccccgggggcactcgttaacatt 35496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 322
Target Start/End: Original strand, 16485443 - 16485573
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta-tcagactt 291  Q
    ||||||||||||||||||| ||||||||  |||||| |||| ||| ||| ||||       ||||| |||||||||||| ||||||||||| | ||  ||    
T  16485443 tctctaacttttgcatggaccgcccttttgggtttttagtccatcaagatgctcttttttgcctaaaccgccttttcaggtttgcgacttattgagcttt 16485542  T
Q  292 tttattttcacaaagtatttcttgactgcat 322  Q
    || ||||| |||||||||||||||| |||||    
T  16485543 ttcattttaacaaagtatttcttgattgcat 16485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 44452101 - 44452045
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagt 85  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  44452101 ttcaatttccaatgcactttattacacaaactttcataaaaaattactatttaaagt 44452045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 843521 - 843390
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||| | ||||||||||       ||||||  |||||||||| ||||||||||||| ||     
T  843521 atgtctctaacttttgcctggaccacccttttgggttttcagtccaccgagacgctcatttttgcctaagatgccttttcaggtttgcgacttatc-gag 843423  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  843422 cttttatgtttgacagagtatttcttgactgca 843390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 850697 - 850566
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||| | ||||||||||       ||||||  |||||||||| ||||||||||||| ||     
T  850697 atgtctctaacttttgcctggaccacccttttgggttttcagtccaccgagacgctcatttttgcctaagatgccttttcaggtttgcgacttatc-gag 850599  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  850598 cttttatgtttgacagagtatttcttgactgca 850566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 1208701 - 1208570
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||| | ||||||||||       ||||||  |||||||||| ||||||||||||| ||     
T  1208701 atgtctctaacttttgcctggaccacccttttgggttttcagtccaccgagacgctcatttttgcctaagatgccttttcaggtttgcgacttatc-gag 1208603  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  1208602 cttttatgtttgacagagtatttcttgactgca 1208570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 44537424 - 44537479
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| |||| |||||||||||||||  |||||||||||||||||||||||||||    
T  44537424 taaaaacttactatttaaagtgcttaaagagtgccccgggggcactcgttaacatt 44537479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 5482447 - 5482377
Alignment:
Q  50 ttacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||| ||| |||||||||||| ||||||||| ||||||| |||||||  ||| |||||||||||||    
T  5482447 ttacacaaaatttcataaaaagttacaatttaaagtccttaacccgtgccccaagggtactcgttaacatt 5482377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 24610878 - 24610824
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgg 103  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||    
T  24610878 attacacaaacttttataaaaaattatcatttaaagtccttaacccgtgccccgg 24610824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 3267675 - 3267579
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| ||| ||||||||||||||  |||||||||||||||||||||| || | |||| | || |||||||||||||||  || |||| |||||||||    
T  3267675 aaagttttccattttcaatgcactc-attacacaaacttttataaaaacttgctattttaggtccttaaccagtgcccctaggacactggttaacatt 3267579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 29026897 - 29026840
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgct 245  Q
    |||||||||||||||||||||||| ||||||||  |||||||| || |||||||||||    
T  29026897 atatgtctctaacttttgcatggaccgcccttttgggttttcaatccatcgagacgct 29026840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 34681738 - 34681830
Alignment:
Q  28 gttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgc-ttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||| ||||||| || | |||||||  |||||||||||||||| ||||||    | |||||||||||||||||||||||||||||||||    
T  34681738 gttcaatttccaatgca-ttaaatacacaagtttttataaaaagttactatttaagacccgttaaccagtgccccgggggcactcgttaacatt 34681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 25037021 - 25036957
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagt 96  Q
    |||||||||||||||||||| |||||||||| ||| |||||||| ||||||| | ||||| ||||    
T  25037021 aattttcaatgcactttattgcacaaactttcatagaaagttacaatttaaaatccttaatcagt 25036957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 17255371 - 17255442
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||||||||||| |||| |||||| || |||||| |||||| | |||||||| |||||||||    
T  17255371 attacgcaaacttttataaaaaattactatttaaggtccttaacaagtgcctcaggggcactagttaacatt 17255442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 16267906 - 16267993
Alignment:
Q  196 ctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta 283  Q
    |||| |||||| |||| ||||||||| ||||||||||| | || |||||||       |||||||||||||||||| |||||||||||    
T  16267906 ctaatttttgcctggaccgccctttcgggttttcagtccaccgggacgctcatttttgcctaagccgccttttcaggtttgcgactta 16267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 12588620 - 12588564
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  12588620 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 12588564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 26871837 - 26871889
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgcccc 101  Q
    |||||||||||||||||||||| |||| |||||| || |||||||||| ||||    
T  26871837 attacacaaacttttataaaaaattactatttaaggtccttaaccagtacccc 26871889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 1890939 - 1890994
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  1890939 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 1890994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 9472088 - 9472033
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  9472088 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 9472033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 16390798 - 16390853
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  16390798 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 16390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 17157791 - 17157737
Alignment:
Q  66 aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||| |||||||  |||||  |||||| ||||||||||||||||||||    
T  17157791 aaaaagttaccttttaaaggtcttaaagagtgcctcgggggcactcgttaacatt 17157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 35731336 - 35731424
Alignment:
Q  31 caattttcaatgcactttattacacaaacttttataaa-aagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| |||||||||| || ||||||  ||||||||| || |||| | |||||||||||||  ||||||| |||||||||||||||||||    
T  35731336 caatttccaatgcacttaat-acacaactttttataaagaacttactaattaaagtgcttaaagagtgccc-gggggcactcgttaacatt 35731424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 38362296 - 38362369
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtg 97  Q
    ||||| |||||||||||||| | ||||||||| ||| ||| || |||| |||| ||||||||| |||||||||||    
T  38362296 aaagttttcaattttcaatgtattttattacataaaatttcattaaaa-ttacaatttaaagttcttaaccagtg 38362369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 1956304 - 1956374
Alignment:
Q  213 cgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta 283  Q
    ||||||||||||||||||||| | || |||||||       |||||||||||||||||| ||| |||||||    
T  1956304 cgccctttcaggttttcagtccaccgggacgctcatttttgcctaagccgccttttcaggttttcgactta 1956374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 8815389 - 8815333
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  8815389 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 8815333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8815449 - 8815409
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  8815449 taacttttgcatagatcgccctttcgggttttcaatctatc 8815409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 23881860 - 23881900
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  23881860 taacttttgcatagatcgccctttcgggttttcaatctatc 23881900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 28663155 - 28663107
Alignment:
Q  72 ttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||| |||||||||||||||  |||||||||| |||| |||||||||||    
T  28663155 ttactatttaaagtgcttaaagagtgccccggaggcattcgttaacatt 28663107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 116
Target Start/End: Complemental strand, 41731600 - 41731572
Alignment:
Q  88 ttaaccagtgccccgggggcactcgttaa 116  Q
    |||||||||||||||||||||||||||||    
T  41731600 ttaaccagtgccccgggggcactcgttaa 41731572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 42633514 - 42633554
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  42633514 taacttttgcatagatcgccctttcgggttttcaatctatc 42633554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 42633574 - 42633630
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  42633574 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 42633630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 47754532 - 47754476
Alignment:
Q  64 ataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||| |||| ||||||||  |||||  |||||||| ||||||||||||||||||    
T  47754532 ataaaaatttactatttaaaggtcttaaagagtgccccaggggcactcgttaacatt 47754476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 20615440 - 20615286
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||       |||||||||||||||||  ||||||||||||| ||     
T  20615440 atgtctctaacttttgcatggatcgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaagtttgcgacttatcgagc 20615341  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||||||| ||||||||||||||||||||||  ||||||||| |||||||||    
T  20615340 ttttttattttaacaaagtatttcttgactgcatcagtattcacatgacatacaa 20615286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 35143323 - 35143174
Alignment:
Q  194 ctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttt 293  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||| ||||||||   |||||    
T  35143323 ctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgtgacttatcgagctttt 35143224  T
Q  294 tattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  35143223 tattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 35143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 25499309 - 25499154
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||| |||||||||| || | ||||||| ||||||||||| ||||||| ||||       |||||||||||||||||| |||||||||||||      
T  25499309 atatgtctcttacttttgcatagaccaccctttcgggttttcagtccatcgagaagctcttttttgcctaagccgccttttcaggtttgcgacttatcga 25499210  T
Q  288 actttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  25499209 gctttttattttaacaaagtatttctttactgcattggtattcacaagacatacaa 25499154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 15948512 - 15948666
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  15948512 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 15948611  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  15948612 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 15948666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 42569988 - 42570142
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  42569988 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 42570087  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  42570088 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 42570142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 21855430 - 21855587
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||        |||||||||||||||||| |||||||||||||     
T  21855430 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttgcctaagccgccttttcaggtttgcgacttatcg 21855529  T
Q  287 gacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  21855530 agctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 21855587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 3761885 - 3762041
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||  |||||||||||||      
T  3761885 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaagtttgcgacttatcga 3761984  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||||  |||| ||| |||||||||||||||||| |||||||||| |||||||||    
T  3761985 actttttccttttaacagagtatttcttgactgcatcggtattcacaggacatacaa 3762041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 16278211 - 16278050
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-----cctaagccgccttttcagatttgcgactt 282  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||            |||||||||||||||||| ||||||||||    
T  16278211 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttttttgcctaagccgccttttcaggtttgcgactt 16278112  T
Q  283 atcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  16278111 atcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 16278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 188 - 333
Target Start/End: Complemental strand, 21117750 - 21117604
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||| |||||||| |||       |||||||| ||||||||| ||||||||||| |      
T  21117750 atatgtctctaacttttgcatgaaccgccctttcgggttttcagtccatcgagacactcttttttgcctaagccaccttttcaggtttgcgacttagcga 21117651  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcaca 333  Q
     |||||| ||||| |||||||||||||||||||||| ||||||||||    
T  21117650 tctttttcattttaacaaagtatttcttgactgcatcggtattcaca 21117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 431693 - 431602
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||||||    
T  431693 ttcaatttccaatgcacttttttacacaaactttcataaaaagttaccatttaaagtctttaaccaatgccccgggagcactagttaacatt 431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 28695683 - 28695609
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  28695683 atgtcaaagtgttcaatttccaatgcaatttattacacaaacttttataaaaagttactatttaaagtgtttaac 28695609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 20277439 - 20277567
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||       |||||||||| ||||||||||||||||||||| |||    
T  20277439 atgtctctaatttttgcctggaccgccctttcaggttttcagtccaccgagacgctcatttttgcctaagccgctttttcagatttgcgacttatcgaga 20277538  T
Q  289 ctttttattttcacaaagtatttcttgact 318  Q
     ||| || ||| ||| ||||||||||||||    
T  20277539 ttttata-tttgacagagtatttcttgact 20277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 29588143 - 29588012
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       | |||||||||||||||| ||||||||||||| ||     
T  29588143 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcattttt-cttaagccgccttttcaggtttgcgacttatcgagc 29588045  T
Q  289 ctttttattttcacaaagtatttcttgactgca 321  Q
    |||||| |||| | |||||||||||||||||||    
T  29588044 cttttttttttgaaaaagtatttcttgactgca 29588012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 24289759 - 24289668
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatc-agactttttattttcacaaagta-tttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||||||||||||||| ||||||||||||| ||  |||||||||| |||||||| ||| |||||||||| |||||||||| || ||||||    
T  24289759 cctaagccgccttttcaggtttgcgacttatcgagcttttttattttaacaaagtatttttttgactgcatcggtattcacaggatatacaa 24289668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 11385503 - 11385591
Alignment:
Q  33 attttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacattc 121  Q
    |||| |||| |||||||| ||||||||||||||||||||||| |||||||| | ||||| || || | ||| |||||| ||||||||||    
T  11385503 atttccaatacactttataacacaaacttttataaaaagttatcatttaaaatccttaatcaatgtctcggaggcactagttaacattc 11385591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 24289842 - 24289786
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  24289842 atgtctccaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctc 24289786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 15806105 - 15806054
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttac 75  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||    
T  15806105 aaagttttcaattttcaatgca-ttgattacacaaacttttataaaaagttac 15806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 30523039 - 30523125
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggg 105  Q
    |||||||||| |||||||| ||||| |||  |||||||||||||| ||||||||||||||| ||| || ||||| || |||| |||||    
T  30523039 atgtcaaagttttcaatttccaatgtacta-attacacaaactttcataaaaagttaccatctaaggtacttaatcaatgcctcgggg 30523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 12205558 - 12205620
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    ||||||| ||| |||| |||||||| |||||||||||| ||| | ||||||||||||||||||    
T  12205558 tcaaagttttccatttgcaatgcacattattacacaaattttcaaaaaaagttaccatttaaa 12205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 12848542 - 12848441
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| |||||||| || ||||||  |||||||||||||| ||||||||||  ||||||| || |||||| | ||| |||||  |||| ||||||    
T  12848542 atgtcaaagttttcaatttccattgcacta-attacacaaactttcataaaaagttgtcatttaaggtccttaactaatgctccgggaacactagttaac 12848444  T
Q  118 att 120  Q
    |||    
T  12848443 att 12848441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 18043892 - 18043943
Alignment:
Q  34 ttttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtg 86  Q
    ||||||||||| || |||||||||| |||||||||||||||| ||||||||||    
T  18043892 ttttcaatgca-ttaattacacaaagttttataaaaagttactatttaaagtg 18043943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 24694191 - 24694098
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta 283  Q
    |||||||||| |||||| | || ||||||||| ||||||||||| | ||||||||||        ||||||||||||||||  |||||||||||    
T  24694191 atgtctctaatttttgcctagaccgccctttcgggttttcagtccaccgagacgctcatttttgtctaagccgccttttcatgtttgcgactta 24694098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 6083969 - 6083911
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccattt 80  Q
    ||||||| ||||||||||||||  ||  |||||||||||||||||||||||||| |||||    
T  6083969 tcaaagttttcaattttcaatgtgctg-attacacaaacttttataaaaagttatcattt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 26721744 - 26721799
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  26721744 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 26721799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 32787641 - 32787551
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||| ||||| | || |||||||||| ||| ||| ||||||| |||||||||  |||||  ||||||  |||||||||||||||||||    
T  32787641 ttcaatttgcaatggatttgattacacaaattttcatataaagttatcatttaaaggtcttaatgagtgcct-gggggcactcgttaacatt 32787551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 34531919 - 34531974
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  34531919 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 34531974  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 565762 - 565662
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||| ||||| |||||||| | |||||||  |||||||||||||| ||||||||||||  ||||   | ||||| ||||||||| |||||||| ||||||    
T  565762 atgtgaaagttttcaatttcctatgcacta-attacacaaactttcataaaaagttactttttatgatccttaatcagtgcccc-ggggcactagttaac 565665  T
Q  118 att 120  Q
    |||    
T  565664 att 565662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 9049209 - 9049148
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaa 91  Q
    |||||||||||||||| || |||||||||| |||||||||||||||  |||||| || |||||    
T  9049209 ttcaattttcaatgca-ttaattacacaaatttttataaaaagttattatttaaggttcttaa 9049148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 24389693 - 24389632
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccattt 80  Q
    |||||||||| |||||||| |||||| ||  |||||||||||||| |||| ||||||||||||    
T  24389693 atgtcaaagttttcaatttccaatgcgctg-attacacaaactttcataagaagttaccattt 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 33898685 - 33898643
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaa 91  Q
    |||||||||| ||||||||||||||||||||||| || |||||    
T  33898685 attacacaaatttttataaaaagttaccatttaaggtccttaa 33898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 6411439 - 6411343
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| ||||| |||  |||||||| |||||||||||||||||  |||||| || |||||| ||| ||| |  |||||| |||||||||    
T  6411439 aaagttttcaatttccaatgtactg-attacacatacttttataaaaagttattatttaaggttcttaactagtaccctgaaggcactagttaacatt 6411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 11610512 - 11610549
Alignment:
Q  84 gtgcttaaccagtgccccgggggcactcgttaacattc 121  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  11610512 gtgcttaaccaatgccccgggggcactggttaacattc 11610549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 40874890 - 40874939
Alignment:
Q  57 aacttttataaaaagttaccatttaaagtgcttaaccagtgccccggggg 106  Q
    |||||| ||||||  |||| ||||||||| ||||||||||||||||||||    
T  40874890 aactttcataaaagtttactatttaaagtccttaaccagtgccccggggg 40874939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 11364704 - 11364744
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgctt 89  Q
    |||| ||||| ||||||||||||||||||||||||| ||||    
T  11364704 attatacaaatttttataaaaagttaccatttaaagagctt 11364744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 343
Target Start/End: Original strand, 24960660 - 24960809
Alignment:
Q  194 ctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttt 293  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||| ||||||||   |||||    
T  24960660 ctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgtgacttatcgagctttt 24960759  T
Q  294 tattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  24960760 tattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 24960809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 21863296 - 21863452
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatcag 287  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||        |||||||||||||||||| |||||||||||||      
T  21863296 tatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttcaggtttgcgacttatcga 21863395  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  21863396 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 21863452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 28848522 - 28848368
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  28848522 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 28848423  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  28848422 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 28848368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 12176442 - 12176599
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc-nnnnnnncctaagccgccttttcagatttgcgacttatc- 285  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  12176442 atatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 12176541  T
Q  286 agactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||  |||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  12176542 agctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 12176599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 21991674 - 21991833
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn---cctaagccgccttttcagatttgcgacttat 284  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||          |||||||||||||||||| ||||||||||||    
T  21991674 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttttgcctaagccgccttttcaggtttgcgacttat 21991773  T
Q  285 cagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  21991774 cgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 21991833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 26085205 - 26085362
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc-nnnnnnncctaagccgccttttcagatttgcgacttatc- 285  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  26085205 atatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 26085304  T
Q  286 agactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||  |||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  26085305 agctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 26085362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 341
Target Start/End: Original strand, 27229476 - 27229630
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||        |||||||||||||||||| ||||||||||||| |    
T  27229476 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgcttttttttgcctaagccgccttttcaggtttgcgacttatcga 27229575  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
    |  |||| ||||| ||||| |||||||||||||||| | |||||||| |||||||    
T  27229576 gctttttcattttaacaaaatatttcttgactgcatcgatattcacaggacatac 27229630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 341
Target Start/End: Original strand, 33840780 - 33840935
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatcag 287  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||| ||||||||||||        |||||||||||||||||| |||||||||||||      
T  33840780 tatgtctctaacttttgcatgggccgcccttttgggttttcagtccatcgagacgctctttttttgcctaagccgccttttcaggtttgcgacttatcga 33840879  T
Q  288 acttttta--ttttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
    |||||||   |||| |||||||||||||||||||||| |||||||||| |||||||    
T  33840880 acttttttcgttttaacaaagtatttcttgactgcatcggtattcacaggacatac 33840935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 20381715 - 20381555
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn----cctaagccgccttttcagatttgcgactta 283  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||| ||||||||||||           |||||||||||||||||| |||||||||||    
T  20381715 atatgtctctaacttttgcatgggccgcccttttgggttttcagtccatcgagacgctcttttttttttgcctaagccgccttttcaggtttgcgactta 20381616  T
Q  284 tcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  20381615 tcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 20381555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 11809287 - 11809446
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn---cctaagccgccttttcagatttgcgacttat 284  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |          |||||||||||||||| | ||||||||||||    
T  11809287 atatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgcgctctttttttgcctaagccgccttttccggtttgcgacttat 11809386  T
Q  285 cagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |   |||||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  11809387 cgagctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 11809446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 25530380 - 25530249
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||  ||    
T  25530380 atgtctctaatttttgcctggaccgccctttcaggttttcagtccaacgagacgctcatttgttcctaagccgccttttcaggtttgcgacttatcgaac 25530281  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  25530280 ttttatttttgacagagtatttcttgactgca 25530249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 23640853 - 23640692
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-----cctaagccgccttttcagatttgcgactt 282  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||             |||||||||||||||||| ||||| ||||    
T  23640853 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctttttttttttttgcctaagccgccttttcaggtttgcaactt 23640754  T
Q  283 atcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  23640753 atcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 23640692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 10410497 - 10410588
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||| | || |||||||||||||||    
T  10410497 ttcaatttccaatgcactttatttaacaaacttttataaaaagttacaatttaaaatgcttaaccagtgcctcaggagcactcgttaacatt 10410588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 23832031 - 23832194
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-------cctaagccgccttttcagatttgcgac 280  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||               |||||||||||||||||| ||||| ||    
T  23832031 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctttttttttttttttgcctaagccgccttttcaggtttgcaac 23832130  T
Q  281 ttatcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||   |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  23832131 ttatcgagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 23832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 21692738 - 21692610
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt 292  Q
    |||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   ||||    
T  21692738 tctctaacttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagcttt 21692639  T
Q  293 ttattttcacaaagtatttcttgactgca 321  Q
    |  |||| ||| |||||||||||||||||    
T  21692638 tatttttgacagagtatttcttgactgca 21692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 324
Target Start/End: Complemental strand, 37582594 - 37582460
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-agac 289  Q
    |||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||      
T  37582594 tgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagct 37582495  T
Q  290 tttttattttcacaaagtatttcttgactgcattg 324  Q
    ||  | |||| ||||||||||||||||||||||||    
T  37582494 ttcattttttgacaaagtatttcttgactgcattg 37582460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 22953988 - 22954131
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| |||||||||| ||||||| || | ||||||||||       ||||||||||||||||||||||||||||||||   |    
T  22953988 atgtctctaatttttgcctggaccgccctttcaagttttcaatccaccgagacgctcatttttgcctaagccgccttttcagatttgcgacttatcgagc 22954087  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattcaca 333  Q
    ||||  |||| | | |||||||||||| ||||  ||||||||||    
T  22954088 ttttatttttgaaagagtatttcttgaatgcaccggtattcaca 22954131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 25767595 - 25767512
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttata-aaaagttaccatttaaagtgcttaaccagtgccc 100  Q
    |||| ||||||||||||||||||  ||||||||| ||||| |||||||| |||| |||||||||||||| ||||||||||||||    
T  25767595 atgttaaagtgttcaattttcaaaacactttattgcacaatcttttataaaaaaattaccatttaaagtacttaaccagtgccc 25767512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 29898456 - 29898361
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||| |||||| | || ||||||||||||||||||||||||||||||||||       |||||||| | ||||||| |||||||||||||    
T  29898456 atgtctctaatttttgcctagaccgccctttcaggttttcagtctatcgagacgctcatttttgcctaagcccctttttcaggtttgcgacttatc 29898361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 5758630 - 5758694
Alignment:
Q  51 tacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgtta 115  Q
    |||||||||||| ||||||| |||||||||||||| |||||  ||||||||||||||||||||||    
T  5758630 tacacaaactttcataaaaacttaccatttaaagtccttaaaaagtgccccgggggcactcgtta 5758694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 36452031 - 36451903
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  36452031 atgtctctaacttttgcctggaccacccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 36451933  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  36451932 cttttatatttgacagagtatttcttgact 36451903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 16636730 - 16636660
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||| || ||||||    
T  16636730 tcaaagttgtcaattttcaatgcacta-attacacaaacttttataaaaagttaccatttaaggtccttaac 16636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 349586 - 349644
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||    
T  349586 atatgtctctaacttttgcatggaccgccttttcgggttttcagtccatcgagacgctc 349644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 28639608 - 28639690
Alignment:
Q  38 caatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||||| |||| ||||||||  ||| ||||| |||||||||    
T  28639608 caatgcactttattacacaaacttttataaaaaattgttatttaaagtccttatccagtgccttgggagcactagttaacatt 28639690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 31672459 - 31672549
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||| ||||||| || |||||| ||| ||| | ||||||||||| |||||||  |||||  |||||||||||||||||||||||||||    
T  31672459 ttcaatttccaatgca-ttgattacaaaaaatttcaaaaaaagttaccttttaaaggtcttaaagagtgccccgggggcactcgttaacatt 31672549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 17774341 - 17774272
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgcc 99  Q
    |||||||| |||| |||||||||||||||| ||| ||||||||||| ||||||||||  ||||||||||||    
T  17774341 ttcaatttccaatacactttattacacaaa-tttcataaaaagttatcatttaaagtcattaaccagtgcc 17774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 20095955 - 20096050
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||| |||||| | || ||||||||| |||||||| ||||||||||| |||       |||||||||| ||||||| |||||||||||||    
T  20095955 atgtctctaatttttgcctagaccgccctttcgggttttcaatctatcgagacactcatttttgcctaagccgctttttcaggtttgcgacttatc 20096050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 29342401 - 29342455
Alignment:
Q  66 aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||| |||||||  |||||  |||||||||||||||||||||||||||    
T  29342401 aaaaagttaccttttaaaggtcttaaaaagtgccccgggggcactcgttaacatt 29342455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 30501161 - 30501107
Alignment:
Q  67 aaaagttaccatttaaagtgcttaaccagtgccccg-ggggcactcgttaacatt 120  Q
    |||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  30501161 aaaacttactatttaaagtgcttaacaagtgccccggggggcactcgttaacatt 30501107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 30541504 - 30541450
Alignment:
Q  67 aaaagttaccatttaaagtgcttaaccagtgccccg-ggggcactcgttaacatt 120  Q
    |||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  30541504 aaaacttactatttaaagtgcttaacaagtgccccggggggcactcgttaacatt 30541450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 20375005 - 20375062
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  20375005 tatgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 20375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 7257267 - 7257323
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||    
T  7257267 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctc 7257323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 7791784 - 7791728
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||    
T  7791784 atgtctctaacttttgcttggaccgcccttttgggttttcagtccaccgagacgctc 7791728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 5437603 - 5437658
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  5437603 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 5437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 11941800 - 11941855
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  11941800 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 11941855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 18229625 - 18229570
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| ||||||||||||||||||||  |||| |||||  |||||||||||||||    
T  18229625 taaaaacttaccatttaaagtgcttaaagagtgtcccggaagcactcgttaacatt 18229570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 19692775 - 19692861
Alignment:
Q  33 attttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||| || |||||||| | ||| || | ||||||| ||||||||  ||||||||||||||| ||| |||| |||||||||    
T  19692775 attttcaatgca-ttgattacacataatttgatgataagttacaatttaaaggccttaaccagtgcccccgggacactggttaacatt 19692861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 27794899 - 27794856
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||    
T  27794899 attatacaaacttttataaaaaattaccatttaaagtccttaac 27794856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 31523090 - 31523035
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  31523090 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 31523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 43000785 - 43000868
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaa-gttaccatttaaagtgcttaaccagtgccc 100  Q
    |||||||| | || ||||||||||||||||| | | ||||||||| ||||||| || || ||||||||| |||||| |||||||    
T  43000785 atgtcaaaatttttaattttcaatgcactttgtcaaacaaactttcataaaaaggtaacaatttaaagtacttaactagtgccc 43000868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 21259488 - 21259411
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagt 96  Q
    |||||||| | || |||||||||||||||  |||||||||||||  ||||||||||| ||||||| ||  |||||||||    
T  21259488 atgtcaaaatttttaattttcaatgcactg-attacacaaacttccataaaaagttatcatttaaggtctttaaccagt 21259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 36609198 - 36609150
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaa 70  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||    
T  36609198 tcaaagttttcaattttcaatgtacta-attacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 1803143 - 1803103
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  1803143 taacttttgcatagatcgccctttcgggttttcaatctatc 1803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 12390473 - 12390513
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  12390473 taacttttgcatagatcgccctttcgggttttcaatctatc 12390513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 12390533 - 12390589
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  12390533 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 12390589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 20374946 - 20374986
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  20374946 taacttttgcatagatcgccctttcgggttttcaatctatc 20374986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 39177781 - 39177813
Alignment:
Q  88 ttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||| |||||||||||||||||||||    
T  39177781 ttaaccagtgctccgggggcactcgttaacatt 39177813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 41002989 - 41002840
Alignment:
Q  194 ctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttt 293  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||| ||||||||   |||||    
T  41002989 ctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgtgacttatcgagctttt 41002890  T
Q  294 tattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  41002889 tattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 41002840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 41011770 - 41011621
Alignment:
Q  194 ctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttt 293  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||| ||||||||   |||||    
T  41011770 ctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgtgacttatcgagctttt 41011671  T
Q  294 tattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  41011670 tattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 41011621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 17930473 - 17930317
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| |    
T  17930473 atatgtctctaacttttgcatggaccgcccttttaggttttcagtccatcgagacgctctttttttcctaagccgccttttcaggtttgcgacttatcga 17930374  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |  |||| ||||| |||||||||||||||||||||| |||||||||| ||| |||||    
T  17930373 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacgtacaa 17930317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 10718135 - 10718293
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc--nnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||         |||||||||||||||| | |||||||||||||    
T  10718135 atatgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttttgcctaagccgccttttccggtttgcgacttatc 10718234  T
Q  286 -agactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     ||  |||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  10718235 gagctttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 10718293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 332
Target Start/End: Original strand, 8201014 - 8201158
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-ag 287  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||| ||||||||||||       ||||||||||||||| || ||||||||||||| ||    
T  8201014 tatgcctctaacttttgcatggactgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgcctttttaggtttgcgacttatcgag 8201113  T
Q  288 actttttattttcacaaagtatttcttgactgcattggtattcac 332  Q
      |||||||||| ||||||||||||||||||||||  ||||||||    
T  8201114 cttttttattttaacaaagtatttcttgactgcatcagtattcac 8201158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 9550680 - 9550836
Alignment:
Q  189 tatgtctctaacttttgcatggatcgcc-ctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    |||| |||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| |    
T  9550680 tatgcctctaacttttgtatggaccgcctctttcaggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgcgacttatcga 9550779  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |  |||||||||| |||||||||||||| |||||||  ||||||||  |||||||||    
T  9550780 gcttttttattttaacaaagtatttcttaactgcatcagtattcaccggacatacaa 9550836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 25268223 - 25268068
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||        |||||||||||||||||  |||||||||||||     
T  25268223 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttttgcctaagccgccttttcaagtttgcgacttatcg 25268124  T
Q  287 gacttttta-ttttcacaaagtatttcttgactgcattggtattcacaagacatac 341  Q
     |||||||  |||| ||| |||||||||||||||||| |||||||||| |||||||    
T  25268123 aactttttccttttaacagagtatttcttgactgcatcggtattcacaggacatac 25268068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 15680508 - 15680666
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||||||||||||||  ||||||||  | ||||||||| ||||||||||||        |||||||||||||||| | |||||||||||||     
T  15680508 atatgtctctaacttttgcatgggccgcccttttggattttcagtccatcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcg 15680607  T
Q  287 gacttttt--attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      ||||||  ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  15680608 agcttttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 15680666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 14662752 - 14662906
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    ||||||| ||||||| |||||| ||||||||| | ||||||||| ||| ||||||||       ||||||||||||||| || ||| ||||||||| ||     
T  14662752 atgtctcgaacttttacatggaccgccctttcggattttcagtccatcaagacgctcttttttacctaagccgcctttttagttttacgacttatcgagc 14662851  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||||||| |||||||||||||||||||||| | |||||| | |||||||||    
T  14662852 ttttttattttaacaaagtatttcttgactgcatcgatattcataggacatacaa 14662906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 15532437 - 15532565
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt 292  Q
    |||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   ||||    
T  15532437 tctctaacttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagcttt 15532536  T
Q  293 ttattttcacaaagtatttcttgactgca 321  Q
    |  |||| ||| |||||||||||||||||    
T  15532537 tattttttacagagtatttcttgactgca 15532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 15624629 - 15624498
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||  | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  15624629 atgtctctaacttttgcctggaccgccctttcgggttttcagttcaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 15624530  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  15624529 ttttatttttgacagagtatttcttgactgca 15624498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 24313587 - 24313688
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| |||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||||||  |||||| ||||||| |||||||| ||||||    
T  24313587 atgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagttatcatttaaagtctttaaccggtgcccc-ggggcactagttaac 24313685  T
Q  118 att 120  Q
    |||    
T  24313686 att 24313688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 8609957 - 8609826
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||| | ||||||||||||| ||     
T  8609957 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcgggtttgcgacttatc-gag 8609859  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| |||||||||||||||||||||    
T  8609858 cttttatgtttgacaaagtatttcttgactgca 8609826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 14883796 - 14883928
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| | || ||||||||| |||||| |||||||||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  14883796 atgtctctaatttttgcctagaccgccctttcgggtttttagtctatcgagacgctcattttttcctaagccgccttttcaggtttgcgacttatcgagc 14883895  T
Q  289 ctttttattttcacaaagtatttcttgactgca 321  Q
     ||| | |||| ||| |||||||||||||||||    
T  14883896 ttttattttttgacagagtatttcttgactgca 14883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 3408771 - 3408640
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||| ||||||||| |||||||||||||  ||    
T  3408771 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccaccttttcaggtttgcgacttatcgaac 3408672  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||   ||| ||| |||||||||||||||||    
T  3408671 ttttatgtttgacagagtatttcttgactgca 3408640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 14146136 - 14146237
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| ||||||||  ||||||||  ||||||||||||| |||||||| |||||||||||||| ||||| ||||  |||||||||||| ||||||    
T  14146136 atgtcaaagttttcaatttctaatgcactg-attacacaaacttctataaaaatttaccatttaaagtccttaatcagtagcccgggggcactagttaac 14146234  T
Q  118 att 120  Q
    |||    
T  14146235 att 14146237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 336
Target Start/End: Original strand, 12475398 - 12475544
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| | || ||||||||| ||||||||||| | ||||||||||       ||||||||||||||| || |||| ||||||||   |    
T  12475398 atgtctctaatttttgcctagaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgcctttttaggtttgtgacttatcgagc 12475497  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattcacaaga 336  Q
    ||||  |||| ||| |||||||||||||||||  |||||||||||||    
T  12475498 ttttatttttgacagagtatttcttgactgcaccggtattcacaaga 12475544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 12553983 - 12553855
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||| ||||||||||||||||||||| |||    
T  12553983 atgtctctaatttttgcttggaccgccctttctggttttcagtccaccgagacgctcatttttgcctaagccgctttttcagatttgcgacttatcgaga 12553884  T
Q  289 ctttttattttcacaaagtatttcttgact 318  Q
     ||| || ||| ||| ||||||||||||||    
T  12553883 ttttata-tttgacagagtatttcttgact 12553855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 20821353 - 20821412
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaa 91  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  20821353 aatttccaatgcactttattacacaaactttcataaaaagttaccatttaaagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 25317846 - 25317942
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| ||||||| |  |||||||||||||||||||||| |||| |||||| || ||||||||||||||||| | |||| |||||||||    
T  25317846 aaagttttcaatttccaatgca-tcgattacacaaacttttataaaaatttactatttaaggtccttaaccagtgccccggagacactggttaacatt 25317942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 325
Target Start/End: Complemental strand, 3681468 - 3681343
Alignment:
Q  201 ttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt-ttatttt 299  Q
    |||||| |||| ||||||||| ||||||||| | | ||||||||||       |||||||||||||||||| ||||||||||||| | ||||  | ||||    
T  3681468 ttttgcctggaccgccctttcgggttttcagaccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgggctttcatttttt 3681369  T
Q  300 cacaaagtatttcttgactgcattgg 325  Q
     ||||||||||||||| |||||||||    
T  3681368 gacaaagtatttcttggctgcattgg 3681343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 13108095 - 13108223
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  13108095 atgtctctaacttttgcctggaccacccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gat 13108193  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  13108194 cttttatatttgacagagtatttcttgact 13108223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 11185094 - 11184962
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| | || | ||||||| ||||||||||||||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  11185094 atgtctctaatttttgcctagaccaccctttcgggttttcagtctatcgagacgctcatttttgcctaagccgctttttcaggtttgcgacttatcgagc 11184995  T
Q  289 ctttttattttcacaaagtatttcttgactgca 321  Q
     ||| | |||| ||| |||||||||||| ||||    
T  11184994 ttttattttttgacagagtatttcttgattgca 11184962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 71895 - 71804
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgact 281  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||    
T  71895 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgact 71804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 6960951 - 6961009
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||    
T  6960951 atatgtctctaacttttgcatggaccgccttttcgggttttcagtccatcgagacgctc 6961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 14422532 - 14422401
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||| | |||| ||||||||| |||| |||||| | ||||||||||       |||||| |||||||| || ||||||||||||||  |    
T  14422532 atgtctctaattttttcctggaccgccctttcgggttgtcagtccaccgagacgctcatttttgcctaaggcgcctttttaggtttgcgacttatcaagc 14422433  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  14422432 ttttatttttgacagagtatttcttgactgca 14422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 325
Target Start/End: Complemental strand, 30018024 - 30017899
Alignment:
Q  201 ttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-agactttttatttt 299  Q
    |||||| |||| ||||||||| ||||||||| | | ||||||||||       |||||||||||||||||| ||||||||||||| ||  ||  | ||||    
T  30018024 ttttgcctggaccgccctttcgggttttcagaccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagctttcatttttt 30017925  T
Q  300 cacaaagtatttcttgactgcattgg 325  Q
     ||||||||||||||| |||||||||    
T  30017924 gacaaagtatttcttggctgcattgg 30017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 30092165 - 30092293
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||| ||||| ||||||||||||| ||     
T  30092165 atgtctctaatttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgcctgttcaggtttgcgacttatc-gag 30092263  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  30092264 cttttatatttgacagagtatttcttgact 30092293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 26382593 - 26382721
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||  |||| || |||||| | ||||||||| |  |||||||||       |||||||||||||||||| |||||||||||||   |    
T  26382593 atgtctctaatttttgtctggaccgtcctttcggattttcagtccacggagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 26382692  T
Q  290 tttttattttcacaaagtatttcttgact 318  Q
    ||||  |||||||| ||||||||||||||    
T  26382693 ttttatttttcacagagtatttcttgact 26382721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 40614336 - 40614262
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaacc 93  Q
    ||||||| || ||||||||||||||||||||||||||||||||||  | |||| ||| |||||||||| |||||||    
T  40614336 atgtcaatgttttcaattttcaatgcactttattacacaaactttcttgaaaattta-catttaaagttcttaacc 40614262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 48551076 - 48551175
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||||| |||||||||||||||||   |||||||||  |||||||||||||||| |||| | || |||||| |||||||  |||||||| ||||||    
T  48551076 atgtcaaagttttcaattttcaatgcac-cgattacacaattttttataaaaagttactatttgaggtccttaactagtgccc--ggggcactagttaac 48551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 21612898 - 21612769
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  |||||| |||| | ||||||||||       |||||||| ||||||||| ||| ||||||||| ||     
T  21612898 atgtctctaacttttgcctggaccgcccttttgggtttttagtccaccgagacgctcatttttgcctaagccaccttttcaggtttacgacttatc-gag 21612800  T
Q  290 tttttat-tttcacaaagtatttcttgactg 319  Q
     |||||| ||| ||| |||||||||||||||    
T  21612799 cttttatgtttgacagagtatttcttgactg 21612769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 23284446 - 23284539
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgactta 283  Q
    |||||||||| |||||| | || ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||  |||||||||||    
T  23284446 atgtctctaatttttgcctagaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaagtttgcgactta 23284539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 37359502 - 37359570
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttt-tataaaaagttaccatttaaagt 85  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||| |  ||||| ||||||||||||||    
T  37359502 atgttaaagttttcaattttcaattcactttattacacaaactttatcaaaaaaattaccatttaaagt 37359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 46725704 - 46725775
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgcccc 101  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||   |||||||||  ||||| ||||||||    
T  46725704 ttcaattttcaatgcactttattacacaaattttta-aaaaagttgttatttaaagtcgttaactagtgcccc 46725775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 3027044 - 3026981
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    |||| ||| |||||||||| | |||||||||||| |||||||||||| ||||||||| ||||||    
T  3027044 ttcattttccaatgcacttcactacacaaactttcataaaaagttactatttaaagtccttaac 3026981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 9342723 - 9342672
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaa 69  Q
    |||| ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  9342723 atgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 11623543 - 11623440
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    |||||||| |||||||||| || |||||||  ||||||||||||| || ||||| |||||||| ||||||||| |||| || ||| | | |||| |||||    
T  11623543 atgtcaaaatgttcaatttccattgcacttatttacacaaactttaataaaaaaattaccattgaaagtgctttaccaatgtcccagagacactagttaa 11623444  T
Q  117 catt 120  Q
    ||||    
T  11623443 catt 11623440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 39651963 - 39652026
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    |||| |||| |||||||| |||||||  |||||| |||||||||||||||||||||| ||||||    
T  39651963 ttcagtttttaatgcactctattacagtaactttcataaaaagttaccatttaaagtccttaac 39652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33072181 - 33072120
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccattt 80  Q
    |||||||||| |||||||| ||||||| || |||||||||| ||||||||||| |||||||||    
T  33072181 atgtcaaagttttcaatttccaatgca-ttaattacacaaatttttataaaaaattaccattt 33072120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 18904722 - 18904779
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  18904722 tatgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 18904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 22853971 - 22853906
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    |||||||||| ||||||||| | | |||||||||||| ||||||| ||||||| ||| ||||||||    
T  22853971 atgtcaaagttttcaatttttattacactttattacataaactttcataaaaaattaacatttaaa 22853906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 4452513 - 4452458
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  4452513 tgtctctaatttttgcttggaccgccctttcgggttttcagtccaccgagacgctc 4452458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 27561334 - 27561389
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  27561334 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 27561389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 29612067 - 29612106
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaa 68  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  29612067 ttcaatttccaatgcactttattacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 37258233 - 37258288
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  37258233 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 37258288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 15581630 - 15581684
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgct 245  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | |||||||||    
T  15581630 tgtctctaaattttgcctggaccgccctttcgggttttcagtccaccgagacgct 15581684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 3240230 - 3240267
Alignment:
Q  196 ctaacttttgcatggatcgccctttcaggttttcagtc 233  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  3240230 ctaacttttgcctggaccgccctttcaggttttcagtc 3240267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 15707213 - 15707156
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||| | | ||||||||||    
T  15707213 tatgtctctaatttttgcctggaccgccctttcgggttttcagcccaccgagacgctc 15707156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 39122226 - 39122193
Alignment:
Q  87 cttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||||||||||| |||||||||    
T  39122226 cttaaccagtgccccgggggcactagttaacatt 39122193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 44291332 - 44291369
Alignment:
Q  84 gtgcttaaccagtgccccgggggcactcgttaacattc 121  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  44291332 gtgcttaaccaatgccccgggggcactggttaacattc 44291369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 71954 - 71914
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||||||| |||| ||||||    
T  71954 taacttttgcatagatcgccctttcaggtgttcaatctatc 71914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3408830 - 3408790
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3408830 taacttttgcatagatcgccctttcgggttttcaatctatc 3408790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 6199364 - 6199308
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  6199364 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 6199308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 6199424 - 6199384
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  6199424 taacttttgcatagatcgccctttcgggttttcaatctatc 6199384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8610016 - 8609976
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  8610016 taacttttgcatagatcgccctttcgggttttcaatctatc 8609976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 8621405 - 8621349
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  8621405 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 8621349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8621465 - 8621425
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  8621465 taacttttgcatagatcgccctttcgggttttcaatctatc 8621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 8809524 - 8809484
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  8809524 taacttttgcatagatcgccctttcgggttttcaatctatc 8809484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 11185154 - 11185114
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  11185154 taacttttgcatagatcgccctttcgggttttcaatctatc 11185114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 14422592 - 14422552
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  14422592 taacttttgcatagatcgccctttcgggttttcaatctatc 14422552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 23284387 - 23284427
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||||| |||||| ||||||    
T  23284387 taacttttgcatagatcgccctttcagattttcaatctatc 23284427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 45757965 - 45758016
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaa 70  Q
    |||||||||| |||||||| |||||||||  |||||||||||||| |||||||    
T  45757965 atgtcaaagttttcaatttacaatgcactg-attacacaaactttcataaaaa 45758016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 46395745 - 46395785
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  46395745 taacttttgcatagatcgccctttcgggttttcaatctatc 46395785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 46395805 - 46395861
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  46395805 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 46395861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 343
Target Start/End: Complemental strand, 31544661 - 31544512
Alignment:
Q  194 ctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttt 293  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||| ||||||||   |||||    
T  31544661 ctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgtgacttatcgagctttt 31544562  T
Q  294 tattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  31544561 tattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 31544512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 13468410 - 13468255
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| |||||||||||||      
T  13468410 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttg-cctaagccgccttttcaggtttgcgacttatcga 13468312  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  13468311 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 13468255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 13473404 - 13473249
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| |||||||||||||      
T  13473404 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctctttttg-cctaagccgccttttcaggtttgcgacttatcga 13473306  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  13473305 gctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 13473249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 31556770 - 31556617
Alignment:
Q  192 gtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatcagact 290  Q
    |||||||||||||||||||| ||||||||| |||||||||||  |||||||||||        |||||||||||||||| | |||||||||||||   ||    
T  31556770 gtctctaacttttgcatggaccgccctttcgggttttcagtccctcgagacgctctttttttgcctaagccgccttttccggtttgcgacttatcgagct 31556671  T
Q  291 tttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  31556670 ttttcattttaacaaagtatttcttgactgcatcggtatacacaggacatacaa 31556617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 2389294 - 2389138
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcaga 288  Q
    ||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||       | ||| |||||||||||| ||||||| |||||       
T  2389294 tatgtctctaacttttgcatggaccgccctttcgggttttcactccatcgagacgctctttttttcttaacccgccttttcaggtttgcgaattatcgag 2389195  T
Q  289 cttt--ttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||||  | ||||| |||||||||||||| ||||||||||||||||||  ||||||||    
T  2389194 cttttctcattttaacaaagtatttcttaactgcattggtattcacagaacatacaa 2389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 322
Target Start/End: Complemental strand, 35073349 - 35073215
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  35073349 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 35073250  T
Q  290 ttt--ttattttcacaaagtatttcttgactgcat 322  Q
    |||  || |||| ||||||||||||||||||||||    
T  35073249 ttttatttttttaacaaagtatttcttgactgcat 35073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 49478854 - 49478950
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| |||||||||  ||||||||||||| ||| ||||||||||||||||  | ||||||||||||||||| |||||| |||||||||    
T  49478854 aaagttttcaatttccaatgcactg-attacacaaacttctatgaaaagttaccatttaagttccttaaccagtgccccggaggcactagttaacatt 49478950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 6200098 - 6200239
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| ||||||||| | ||||||||  ||||||||||| | ||||||||||       |||||||| ||||||||| |||||||||||||   |    
T  6200098 atgtctctaatttttgcatgaaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagcctccttttcaggtttgcgacttatcgagc 6200197  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattca 331  Q
    ||||  |||| ||| |||||||||||||||||  ||||||||    
T  6200198 ttttatttttgacagagtatttcttgactgcaccggtattca 6200239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 48947240 - 48947322
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgcccc 101  Q
    |||||||||| |||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||| |||||| ||||||||    
T  48947240 atgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 48947322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 4040930 - 4041029
Alignment:
Q  19 tgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaaca 118  Q
    ||||||||| |||||||||||||  |||| |||||||||||||| | ||||||||| |||||||||| |||||| |||| ||| | ||||||||||||||    
T  4040930 tgtcaaagttttcaattttcaatatactt-attacacaaactttcacaaaaagttatcatttaaagtccttaactagtgtccc-gaggcactcgttaaca 4041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 339
Target Start/End: Complemental strand, 19372970 - 19372824
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt 292  Q
    ||||||| |||||| |||| ||||||||| |||| |||||| | | ||||||||       ||||||||||||||| || |||||||||||||   ||||    
T  19372970 tctctaatttttgcctggaccgccctttcgggttgtcagtccaccaagacgctcatttttgcctaagccgcctttttaggtttgcgacttatcgagcttt 19372871  T
Q  293 ttattttcacaaagtatttcttgactgcattggtattcacaagacat 339  Q
    |  |||| ||| |||||||||||||||||  |||||||||| |||||    
T  19372870 tatttttgacagagtatttcttgactgcaccggtattcacaggacat 19372824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 38172681 - 38172762
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccc 100  Q
    |||| ||||| || |||||| ||||||||  |||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  38172681 atgtaaaagtttttaatttttaatgcactg-attacacaaacttttataaaaagttatcatttaaagtccttaacaagtgccc 38172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 39973928 - 39974029
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||| ||||| |||||||||||||||| || |||| ||||||||| ||||||||||| ||||||||||  ||||||||||| ||||  ||||  ||||||    
T  39973928 atgttaaagttttcaattttcaatgca-ttgattatacaaactttcataaaaagttatcatttaaagtctttaaccagtgctccggaagcacaagttaac 39974026  T
Q  118 att 120  Q
    |||    
T  39974027 att 39974029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 9931811 - 9931875
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    |||||||||| ||||||||||||| || || |||||||||||||||||||||| ||||||||||||    
T  9931811 atgtcaaagttttcaattttcaataca-ttaattacacaaacttttataaaaaattaccatttaaa 9931875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 37188585 - 37188521
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtg 97  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||| ||||    
T  37188585 aattttcaatgcactttattacacaaacttttacaaaaagtta-tatttaaagtccttaactagtg 37188521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 40286899 - 40286990
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    ||||| |||||||| |||||||||  | ||||||||||||||||||||||||| ||||||||| |||||| ||||  ||||||||||| |||||    
T  40286899 aaagttttcaatttccaatgcactg-agtacacaaacttttataaaaagttactatttaaagttcttaactagtg-tccgggggcactagttaa 40286990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 40053329 - 40053392
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaa 82  Q
    |||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||| ||||||    
T  40053329 atgtcaaagttttcaattttcaataca-tttattacacaaactttcataaaaagttactatttaa 40053392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 7231956 - 7232003
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaa 70  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7231956 aaagtgtttaattttcaatgtactttattacacaaacttttataaaaa 7232003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 24075135 - 24075214
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtg 97  Q
    ||||||||||||| ||||||||||||||||||||| | ||| ||| | |||| |||| ||||||||||  ||||||||||    
T  24075135 atgtcaaagtgtttaattttcaatgcactttattatataaattttcaaaaaatgttatcatttaaagtctttaaccagtg 24075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 39807570 - 39807661
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||||||||||||| |||||||  ||||||| | ||||| |||||  ||||| |||||||| |  ||||| |||||||||    
T  39807570 ttcaattttcaatgcactttattacataaactttcgtaaaaagctgccattgaaagtctttaactagtgccccagaagcactagttaacatt 39807661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 1959620 - 1959489
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| | || |||||||||  |||||||||| | ||||||| ||       |||||||||||||||| | |||||||||||||   |    
T  1959620 atgtctctaatttttgcctagaccgccctttcgagttttcagtccaccgagacgttcatttttgcctaagccgccttttccggtttgcgacttatcgagc 1959521  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  1959520 ttttatttttgacagagtatttcttgactgca 1959489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 759296 - 759223
Alignment:
Q  19 tgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    ||||||||| | |||||| |||| |||||||||||||||||||  ||||||  |||||||||||||| ||||||    
T  759296 tgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagattaccatttaaagttcttaac 759223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 16113955 - 16114058
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttt--tataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgtta 115  Q
    |||||||||| |||||||| |||||||||  ||||||||||||||  || |||||||||||||||||    |||||  ||||||||| ||||||| ||||    
T  16113955 atgtcaaagttttcaatttccaatgcactg-attacacaaactttcataaaaaaagttaccatttaagccccttaagtagtgccccgagggcactagtta 16114053  T
Q  116 acatt 120  Q
    |||||    
T  16114054 acatt 16114058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 33791779 - 33791726
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccg 102  Q
    |||||||||||||| |||||||||||| |||||||||  |||||||||||||||    
T  33791779 attacacaaactttcataaaaagttactatttaaagtctttaaccagtgccccg 33791726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 31807839 - 31807800
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaa 68  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  31807839 ttcaattttcaatgcactttattacacaaactttcataaa 31807800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 48956 - 48859
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    |||| ||||| |||||||||||||||||   |||||||||||||| ||||||| |||| || ||| || |||||  ||||||||||| |||||| ||||    
T  48956 atgtaaaagttttcaattttcaatgcaccg-attacacaaactttcataaaaatttactatgtaaggttcttaatgagtgccccgggagcactcattaa 48859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 2338454 - 2338545
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgact 281  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | |||| |||||       || ||||||||||||||| |||||||||    
T  2338454 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgaggcgctcatttttgcccaagccgccttttcaggtttgcgact 2338545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 27934788 - 27934747
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaa 70  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  27934788 ttcaattttcaatacaatttattacacaaacttttataaaaa 27934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32787326 - 32787261
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    |||| |||||||||||||   ||| || ||||||||||||| |||||||||||||||| |||||||    
T  32787326 atgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaagttactatttaaa 32787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 43397038 - 43396983
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| |||| |||||||||| ||||| ||||| ||| |||||||||||||||||    
T  43397038 taaaaacttactatttaaagtgtttaacgagtgcgccgagggcactcgttaacatt 43396983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 35259116 - 35259043
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    |||| ||||| |||||||| |||||| ||  |||||||| || ||| ||||||||||||||||||||| ||||||    
T  35259116 atgtaaaagttttcaatttccaatgcgctg-attacacacacatttgtaaaaagttaccatttaaagtccttaac 35259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 46124008 - 46123955
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    ||||||||||||| || ||||||||||||  |||||| |||||||||||||||||    
T  46124008 ttcaattttcaataca-tttattacacaattttttattaaaagttaccatttaaa 46123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 13456557 - 13456500
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||    
T  13456557 tatgtctctaatttttgcctggaccgcccttttgggttttcagtccaccgagacgctc 13456500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 31043037 - 31043085
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataa 67  Q
    |||||||||| |||||||||||||||| || |||||||||||||| ||||    
T  31043037 atgtcaaagttttcaattttcaatgca-ttgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 48282983 - 48283020
Alignment:
Q  84 gtgcttaaccagtgccccgggggcactcgttaacattc 121  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  48282983 gtgcttaaccaatgccccgggggcactggttaacattc 48283020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 1959680 - 1959640
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  1959680 taacttttgcatagatcgccctttcgggttttcaatctatc 1959640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 9297208 - 9297172
Alignment:
Q  301 acaaagtatttcttgactgcattggtattcacaagac 337  Q
    |||||||||| |||||||||||| |||||||||||||    
T  9297208 acaaagtattccttgactgcattagtattcacaagac 9297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 14816090 - 14816130
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  14816090 taacttttgcatagatcgccctttcgggttttcaatctatc 14816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 19373032 - 19372992
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  19373032 taacttttgcatagatcgccctttcgggttttcaatctatc 19372992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 4128 - 4284
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-a 286  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| |    
T  4128 atatgtctctagcttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgcgacttatcga 4227  T
Q  287 gactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |  |||| ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  4228 gctttttcattttaacaaagtatttcttgactgcaacggtattcacaggacatacaa 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1691 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1691
Description:

Target: scaffold1691; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Complemental strand, 463 - 309
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  463 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 364  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  363 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 17678407 - 17678561
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  17678407 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttacctaagccgctttttcaggtttgcgacttatcgagc 17678506  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  17678507 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 17678561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 1445204 - 1445130
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1445204 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttagaaaaagttaccatttaaagtgtttaac 1445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 343
Target Start/End: Original strand, 39841061 - 39841212
Alignment:
Q  192 gtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactt 291  Q
    |||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||       |||||||||||||||||| |||||||||||||   |||    
T  39841061 gtctctaacttttgcatggaccaccctttcgggttttcagtccatcgagacgctctttttg-cctaagccgccttttcaggtttgcgacttatcgagctt 39841159  T
Q  292 ttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    ||| ||||| ||||||||||||||||||||||  ||||| ||| |||||||||    
T  39841160 tttcattttaacaaagtatttcttgactgcatcagtatttacaggacatacaa 39841212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 34722837 - 34722748
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||  |||||||| |||||||||    
T  34722837 ttcaattttcaatgcactttattatacaaactttcataaaaagttaccatttaaagtccttaaccagttccc--ggggcactagttaacatt 34722748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 193 - 333
Target Start/End: Complemental strand, 6667571 - 6667429
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt 292  Q
    ||||||||||||||||||| ||||||||| ||||||||||| | |||||| |||       ||||||| || ||||||| |||||||||||||   ||||    
T  6667571 tctctaacttttgcatggaccgccctttcgggttttcagtccaccgagacactcttttttgcctaagctgctttttcaggtttgcgacttatcgagcttt 6667472  T
Q  293 tt--attttcacaaagtatttcttgactgcattggtattcaca 333  Q
    ||  ||||| |||||||||||||||||||||| ||||||||||    
T  6667471 tttcattttaacaaagtatttcttgactgcatcggtattcaca 6667429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 322
Target Start/End: Complemental strand, 32003978 - 32003844
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  32003978 atgtctctaatttttgcctggaccgccctttcaggttttcagtccaccgagacgctcattttttcctaagccgccttttcaggtttgcgacttatcgagc 32003879  T
Q  290 ttt--ttattttcacaaagtatttcttgactgcat 322  Q
    |||  || |||| ||||||||||||||||||||||    
T  32003878 ttttatttttttgacaaagtatttcttgactgcat 32003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 32133745 - 32133664
Alignment:
Q  39 aatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||| | |||||||||||| ||||||||||| |||||||||    
T  32133745 aatgcactttattacacaaactttcataaaaaattactatttaaattccttaaccagtgctccgggggcactagttaacatt 32133664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 1876552 - 1876451
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||||||| | |||||||| |||||||||  |||||||||||||| ||||||| |||||||||||||| |||||||| ||||| || |||||| ||||||    
T  1876552 atgtcaaaattttcaatttccaatgcactg-attacacaaactttcataaaaaattaccatttaaagtccttaaccaatgcccaggaggcactagttaac 1876454  T
Q  118 att 120  Q
    |||    
T  1876453 att 1876451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 14016932 - 14016836
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| |||||||||  || ||||||||||||||||||| |||| |||||| || |||||| ||||||||||||||||| |||||||||    
T  14016932 aaagttttcaatttccaatgcactg-atcacacaaacttttataaaaaattactatttaaggtccttaactagtgccccgggggcactagttaacatt 14016836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 36907841 - 36907937
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| ||||||| |  ||||||||||||||||||||||||||| ||||||||| |||| | |||||||| |||||||| |||||||||    
T  36907841 aaagttttcaatttccaatgcaatg-attacacaaacttttataaaaagttactatttaaagtccttagctagtgcccccggggcactagttaacatt 36907937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 20731205 - 20731124
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcag 271  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||       ||||||||||||||||||    
T  20731205 atgtctctaacttttgcttggaccgccctttcaggttttcagtctaccgagacgctcattttttcctaagccgccttttcag 20731124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 31844286 - 31844186
Alignment:
Q  20 gtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacat 119  Q
    |||||||| || ||||| |||||||||| |||| ||||||||| |||||||||||| ||||||||| |||||||| ||||| || || ||| ||||||||    
T  31844286 gtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagttactatttaaagtccttaaccaatgccctggaggtactagttaacat 31844187  T
Q  120 t 120  Q
    |    
T  31844186 t 31844186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 20746459 - 20746328
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| | ||||||| ||||||||||| | ||||||||||       |||||||||||||||||| || |||||||||| ||     
T  20746459 atgtctctaacttttgcttggaccaccctttcgggttttcagtccaccgagacgctcattttttcctaagccgccttttcaggttagcgacttatc-gag 20746361  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||||| |||||||||||||||    
T  20746360 cttttatgtttgacaaactatttcttgactgca 20746328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 12002303 - 12002404
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||| ||||| |||||||| |||||||||  |||||||||| |||||||||||||||| ||||||  | |||||||||||||||| || |||| ||||||    
T  12002303 atgtaaaagttttcaatttccaatgcactg-attacacaaatttttataaaaagttactatttaagatccttaaccagtgccccgtggacactagttaac 12002401  T
Q  118 att 120  Q
    |||    
T  12002402 att 12002404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 41960032 - 41959952
Alignment:
Q  38 caatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||| ||||  ||||||| |||||||||    
T  41960032 caatgcactttattatacaaactttcataaaaaattatcatttaaagtccttaaccagtacccc--gggcactagttaacatt 41959952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 8350268 - 8350203
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtg 97  Q
    ||||| |||| || |||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  8350268 aatttccaatacattttattacacaaacttttataaaaagatactatttaaagttcttaaccagtg 8350203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 35501133 - 35501064
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaac 92  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||    
T  35501133 aaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaatatttaaagtccttaac 35501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 38047666 - 38047602
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagt 96  Q
    |||||| |||||||||||||||||||||||| ||| ||||||| |||||||||| ||||| ||||    
T  38047666 aatttttaatgcactttattacacaaactttcatataaagttatcatttaaagtccttaatcagt 38047602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 39594556 - 39594458
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||| ||||||||||| | ||||  |||| ||||||||| ||||||||||| |||||||  | |||||||| ||||||| ||||| |||||||||||    
T  39594556 tcaaagttttcaattttcattacactg-attatacaaactttcataaaaagttatcatttaagatccttaaccaatgccccgagggcattcgttaacatt 39594458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 322
Target Start/End: Original strand, 22159446 - 22159579
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||| |   |    
T  22159446 atgtctctaa-ttttgcttggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttagcgagc 22159544  T
Q  290 ttt--ttattttcacaaagtatttcttgactgcat 322  Q
    |||  || |||| ||| ||||||||||||||||||    
T  22159545 ttttatttttttgacatagtatttcttgactgcat 22159579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 24702285 - 24702419
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcaga 288  Q
    ||||||||||| |||||| |||| || |||||| ||||||||||| | ||||||||||       |||||||| |||||| || |||||||||||||       
T  24702285 tatgtctctaatttttgcctggaccgtcctttcgggttttcagtccaccgagacgctcttttttgcctaagccacctttttagttttgcgacttatcgag 24702384  T
Q  289 c--tttttattttcacaaagtatttcttgactgca 321  Q
    |  ||||| |||| |||||||||||||||| ||||    
T  24702385 ctgttttttttttaacaaagtatttcttgagtgca 24702419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 25855626 - 25855755
Alignment:
Q  192 gtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactt 291  Q
    |||||||| |||||| | || ||||||||  ||||||||||| | |||||| |||       |||||||| ||||||||| ||||||||||||| || ||    
T  25855626 gtctctaatttttgcctagaccgcccttttgggttttcagtccaccgagacactcatttttgcctaagccaccttttcaggtttgcgacttatc-gagtt 25855724  T
Q  292 tttat-tttcacaaagtatttcttgactgca 321  Q
    ||||| ||| ||| |||||||||||||||||    
T  25855725 tttatgtttgacagagtatttcttgactgca 25855755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 30486675 - 30486743
Alignment:
Q  49 attacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    ||||||||||||||||| ||||| |||| ||||||||| |||||||||| ||||| ||||||| |||||    
T  30486675 attacacaaacttttataaaaaaattactatttaaagtccttaaccagtaccccgagggcactagttaa 30486743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 42636389 - 42636334
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||| ||||||||||||||||||||  ||||| ||||| |||||||||||||||    
T  42636389 taaaaacttaccatttaaagtgcttaaagagtgctccgggagcactcgttaacatt 42636334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 8349739 - 8349823
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccg 102  Q
    |||||||||| || |||||| ||| |||||||||||| ||||||| | |||| | ||||||||||| | ||||||| | ||||||    
T  8349739 atgtcaaagttttaaatttttaatacactttattacataaactttcaaaaaatgataccatttaaaattcttaaccggcgccccg 8349823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 14453717 - 14453757
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaa 58  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  14453717 atgtcaaagtttttaattttcaatgcactttattacacaaa 14453757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 16723222 - 16723175
Alignment:
Q  73 taccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||||||  |||| | ||||||||||||||||||||    
T  16723222 taccatttaaagtgcttaaaaagtgtctcgggggcactcgttaacatt 16723175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 16771099 - 16771044
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  16771099 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 16771044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 24733238 - 24733309
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||| ||||||||||| |||| ||| || || |||||  |||||||||| | ||||||||||||||    
T  24733238 attacacaaatttttataaaaacttactattaaaggtacttaaagagtgccccggagacactcgttaacatt 24733309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 27801283 - 27801194
Alignment:
Q  31 caattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||| || |||||||||  |||||| ||||| |||| |||||||||||||||  ||| ||||  | |||||||||||||||    
T  27801283 caattttcaatgca-ttcattacacaactttttattaaaaacttactatttaaagtgcttaaagagtaccccaagagcactcgttaacatt 27801194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 19846943 - 19846886
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||| | | ||||||||||    
T  19846943 tatgtctctaatttttgcctggaccgccctttcgggttttcagcccaccgagacgctc 19846886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 44024062 - 44024149
Alignment:
Q  32 aattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||||  ||||||||||||| ||| ||||| |||  |||| | || ||||||||||| |||||||||||| |||||||||    
T  44024062 aattttcaatgcactg-attacacaaacttctataaaaaaattattattttaggtccttaaccagtg-cccgggggcactagttaacatt 44024149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44220780 - 44220716
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaa 83  Q
    |||||||||| |||||||| |||||||||  ||||||||||| |  ||||||| ||||||||||||    
T  44220780 atgtcaaagttttcaatttccaatgcactc-attacacaaacgtccataaaaatttaccatttaaa 44220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 20746519 - 20746479
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  20746519 taacttttgcatagatcgccctttcgggttttcaatctatc 20746479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 21478434 - 21478474
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  21478434 taacttttgcatagatcgccctttcgggttttcaatctatc 21478474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 21478494 - 21478550
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  21478494 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 21478550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 22091700 - 22091740
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  22091700 taacttttgcatagatcgccctttcgggttttcaatctatc 22091740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 22159387 - 22159427
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||| |||||||||||||||| ||||||    
T  22159387 taacttttgcatagatctccctttcaggttttcaatctatc 22159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 26014794 - 26014738
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggg 105  Q
    ||||||||||| ||||||||||||||| |||||  || ||||| ||||| |||||||    
T  26014794 attacacaaacatttataaaaagttactatttatggtccttaatcagtgtcccgggg 26014738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 32004038 - 32003998
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  32004038 taacttttgcatagatcgccctttcgggttttcaatctatc 32003998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 8098570 - 8098724
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||       |||||||||| ||||||| ||||||||||||| ||     
T  8098570 atgtctctaacttttgcatggaccgccctttcgggttttcagtccatcgagacgctcttttttgcctaagccgctttttcaggtttgcgacttatcgagc 8098669  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||| ||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  8098670 tttttcattttaacaaagtatttcttgactgcatcggtatttacaggacatacaa 8098724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 21687653 - 21687554
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||  |||||| ||| |||||||||    
T  21687653 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaaatgcttcatcagtgcttcgggggtactagttaacatt 21687554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 343
Target Start/End: Original strand, 26216049 - 26216207
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn--cctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||||||||||| ||||  ||||||||  ||||||||||| ||||||||||||         |||||||||||||||| | |||||||||||||    
T  26216049 atatgtctctaacttttgtatgggccgcccttttgggttttcagtccatcgagacgctcttttttttgcctaagccgccttttccggtttgcgacttatc 26216148  T
Q  286 agacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
       |||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  26216149 gagctttttcattttaacaaagtatttcttgactgcatcggtattcacaggacatacaa 26216207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 33183363 - 33183205
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgc--tcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |        |||||||| | ||||||| |||||| ||||||    
T  33183363 atatgtctctaacttttgcatggaccgccatttcaggttttcagtctatcgagacgcttttttttttgcctaagcccctttttcaggtttgcggcttatc 33183264  T
Q  286 -agactttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     ||  |||| ||||| |||||||||||||||||||||| | |||||||| |||||||||    
T  33183263 gagctttttcattttaacaaagtatttcttgactgcatcgatattcacaggacatacaa 33183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 15895488 - 15895629
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  15895488 atgtctctaatttttgcctggaccgccctttcaggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 15895587  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattca 331  Q
    ||||  |||| ||| |||||||||||||||||  ||||||||    
T  15895588 ttttatttttgacagagtatttcttgactgcaccggtattca 15895629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 325
Target Start/End: Complemental strand, 3361478 - 3361342
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  3361478 atgtctctaatttttgcctggaccgccctttcgggttttcagtccatcgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 3361379  T
Q  289 ctttttattttcacaaagtatttcttgactgcattgg 325  Q
     ||  | |||| |||||||||||||||||||||||||    
T  3361378 tttcattttttgacaaagtatttcttgactgcattgg 3361342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 322
Target Start/End: Complemental strand, 20558149 - 20558015
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  20558149 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 20558050  T
Q  290 ttt--ttattttcacaaagtatttcttgactgcat 322  Q
    |||  || |||| ||||||||||||||||||||||    
T  20558049 ttttatttttttgacaaagtatttcttgactgcat 20558015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 333
Target Start/End: Original strand, 3831221 - 3831366
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgcc--ttttcagatttgcgacttatcag 287  Q
    ||||||||||||||||| | || ||||||||| ||||||||||| | ||||||||||       ||||| |||||  |||||||||||||||||||||      
T  3831221 atgtctctaacttttgcctagaccgccctttcgggttttcagtccaccgagacgctcacttttgcctaaaccgccttttttcagatttgcgacttatcga 3831320  T
Q  288 actttttattttcacaaagtatttcttgactgcattggtattcaca 333  Q
     |||||  |||| ||| ||||||||||||||||| |||||||||||    
T  3831321 gcttttatttttgacagagtatttcttgactgcactggtattcaca 3831366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 35153287 - 35153354
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagt 85  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  35153287 atgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactatttaaagt 35153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 15570113 - 15570244
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||| | ||     
T  15570113 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgactta-ccgag 15570211  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  15570212 cttttatgtttgacagagtatttcttgactgca 15570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 15574241 - 15574372
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||| | ||     
T  15574241 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgactta-ccgag 15574339  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  15574340 cttttatgtttgacagagtatttcttgactgca 15574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 32175478 - 32175569
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||| ||||||||||  ||||| ||||||||| | ||||| |||||||||    
T  32175478 ttcaattttcaatgtactttattgcacaaactttcacaaaaagttatcatttaaagtctttaactagtgccccgagagcactagttaacatt 32175569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 40252692 - 40252792
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||| ||||| ||||||||||||| || || ||||||||| |||| ||||||| |||| ||||||||| ||||||||||||||||| | |||||||||||    
T  40252692 atgttaaagttttcaattttcaataca-ttgattacacaa-ctttcataaaaatttactatttaaagtccttaaccagtgccccggagacactcgttaac 40252789  T
Q  118 att 120  Q
    |||    
T  40252790 att 40252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 49421965 - 49421863
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaac 117  Q
    |||| ||||| |||||||| ||||||||||||||  |||| ||||||||||  |||  |||||||||| |||||| ||||||||||| ||||| ||||||    
T  49421965 atgttaaagttttcaatttccaatgcactttattgtacaagcttttataaatcgttgtcatttaaagtccttaactagtgccccgggagcactagttaac 49421866  T
Q  118 att 120  Q
    |||    
T  49421865 att 49421863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 53261599 - 53261695
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| |||||||| ||||||| |  ||||||||||||||||||||||||||| ||||||||| |||||| ||||||| ||| |||||  ||||||||    
T  53261599 aaagttttcaatttccaatgcagtg-attacacaaacttttataaaaagttactatttaaagtccttaacgagtgccctgggagcactatttaacatt 53261695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 3384845 - 3384976
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||| ||| ||||||||||| | ||||||||||       |||||||||||||||| | ||||||||||||| ||     
T  3384845 atgtctctaatttttgcctggaccgcccattcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcgggtttgcgacttatc-gag 3384943  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  3384944 cttttatgtttgacagagtatttcttgactgca 3384976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 16365928 - 16365785
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| | |||||| |||       |||||||||| |||| || ||||||||||||| ||     
T  16365928 atgtctctaacttttgcatggaccgcccttttgggttttcagtccaccgagacactcatttttgcctaagccgcatttttaggtttgcgacttatc-gag 16365830  T
Q  290 tttttat-tttcacaaagtatttcttgactgcattggtattcaca 333  Q
     |||||| ||| ||| ||||||||||||||| |  ||||||||||    
T  16365829 cttttatgtttgacagagtatttcttgactgaaccggtattcaca 16365785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 20022237 - 20022327
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||| ||||||| || |||  ||||||||| ||||||| |||| |||||| || ||||||||||||||| ||||||||||||||||||    
T  20022237 ttcaatttccaatgca-ttgattgtacaaactttcataaaaaattactatttaaggtccttaaccagtgccccaggggcactcgttaacatt 20022327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 39724137 - 39724055
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccc 100  Q
    |||||||||| |||||||| ||||  ||||||||| ||||||||||||||||  |||||||||||||| |||||  |||||||    
T  39724137 atgtcaaagttttcaatttacaatatactttattatacaaacttttataaaatattaccatttaaagttcttaataagtgccc 39724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 201 - 331
Target Start/End: Complemental strand, 39531675 - 39531546
Alignment:
Q  201 ttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttttattttc 300  Q
    |||||| |||| ||||||||| ||||||||||| | ||||||||||       ||||| |||||||||||| ||||||||||||| ||  ||| || ||     
T  39531675 ttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaaaccgccttttcaggtttgcgacttatc-gagctttcatgttg 39531577  T
Q  301 acaaagtatttcttgactgcattggtattca 331  Q
    ||| |||||||||||||||||| || |||||    
T  39531576 acagagtatttcttgactgcatcggcattca 39531546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 3179072 - 3178996
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgcc 99  Q
    ||||| |||||||| |||| |||||||||||||||||||| |||||||||||| ||||| |||  |||||| |||||    
T  3179072 aaagttttcaatttccaatacactttattacacaaactttcataaaaagttactatttatagtctttaaccggtgcc 3178996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 22144044 - 22144102
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||||||||| |||| |||| |||||||| || ||||||||||||    
T  22144044 atatgtctctaacttttgcatggaccgccttttcgggttttcaatccatcgagacgctc 22144102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 9188553 - 9188459
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttat 284  Q
    ||||||||||||||||| |||| ||||| ||  ||||||||||| | ||||||||||       ||||||| |||||||||| ||||||||||||    
T  9188553 atgtctctaacttttgcctggaccgcccctttgggttttcagtccaccgagacgctcatttttgcctaagctgccttttcaggtttgcgacttat 9188459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 3362175 - 3362119
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| ||||||||||||    
T  3362175 atgtctctaatttttgcctggaccgccctttcgggttttcagtccatcgagacgctc 3362119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 3362872 - 3362816
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| ||||||||||||    
T  3362872 atgtctctaatttttgcctggaccgccctttcgggttttcagtccatcgagacgctc 3362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 14922500 - 14922368
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgcc-ttttcagatttgcgacttatcaga 288  Q
    ||||||||||||||||| |||| |||||||   ||||||||||| | ||||||||||       ||||||||||| ||||||| ||||||||||||| ||    
T  14922500 atgtctctaacttttgcctggaccgcccttctgggttttcagtccaccgagacgctcatttttgcctaagccgcctttttcaggtttgcgacttatc-ga 14922402  T
Q  289 ctttttat-tttcacaaagtatttcttgactgca 321  Q
      |||||| ||| ||  |||||||||||||||||    
T  14922401 gcttttatgtttgaccgagtatttcttgactgca 14922368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 38682055 - 38682008
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttataaaaa 70  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  38682055 aaagttttcaattttcaatacactttattacacaagcttttataaaaa 38682008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 46010607 - 46010552
Alignment:
Q  45 ctttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccc 100  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||| || |||||    
T  46010607 ctttattacataaacttttataaaatgttaccatttaaagtccttaagcaatgccc 46010552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 51291156 - 51291223
Alignment:
Q  53 cacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||| ||||||  ||||||||| | ||||||||  |||||||| ||||||||||||||||||    
T  51291156 cacaaactttcataaaatcttaccattttaggtgcttaaagagtgcccccggggcactcgttaacatt 51291223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 53622339 - 53622426
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccgggg 105  Q
    |||||||| | |||||||| ||   |||||||||||||||| ||| | ||||||||| |||||||||| |||||| ||||||| ||||    
T  53622339 atgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatcatttaaagttcttaactagtgcccggggg 53622426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 7628042 - 7628096
Alignment:
Q  66 aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||| |||||||  |||||  |||||||||||||||||||||||||||    
T  7628042 aaaaagttaccttttaaaggtcttaaagagtgccccgggggcactcgttaacatt 7628096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 7852601 - 7852516
Alignment:
Q  31 caattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaa 116  Q
    |||||||||||||| |||| |||||||  ||| || ||||| |||| |||||||||||||||  |||||||||| ||||||||||||    
T  7852601 caattttcaatgca-tttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgccccggtggcactcgttaa 7852516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 321
Target Start/End: Original strand, 16723173 - 16723303
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagact 290  Q
    ||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||| ||||||  || ||||||||||   ||    
T  16723173 tgtctctaatttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgctttttcaagttcgcgacttatccagct 16723272  T
Q  291 ttttattttcacaaagtatttcttgactgca 321  Q
    |||  |||| ||| ||||| |||||||||||    
T  16723273 tttatttttgacagagtatctcttgactgca 16723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 12616569 - 12616625
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||| | || |||||||    
T  12616569 atgtctctaacttttgcctggaccgccctttcgggttttcagtccaccgggacgctc 12616625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 23614662 - 23614702
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttataaaa 69  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  23614662 ttcaattttcaatacactttattacataaacttttataaaa 23614702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 49795191 - 49795262
Alignment:
Q  29 ttcaattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccc 100  Q
    |||||||||||||||||   ||||||||||||||||| ||||| |||| ||||||||| ||||||| ||||||    
T  49795191 ttcaattttcaatgcaccg-attacacaaacttttataaaaaaattactatttaaagtccttaacccgtgccc 49795262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 36876097 - 36876042
Alignment:
Q  49 attacacaaacttttataaaaagttaccatttaaagtgcttaaccagtgccccggg 104  Q
    ||||||||||||||||||||||||||||| ||||    ||||||| ||||||||||    
T  36876097 attacacaaacttttataaaaagttaccacttaagaaccttaaccggtgccccggg 36876042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 39767248 - 39767345
Alignment:
Q  23 aaagtgttcaattttcaatgcactttattacacaaacttttat-aaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||| || ||||| ||||||| || ||||||||||||||||| ||||| |||| |||| | || |||||||||||| |||| | |||| |||||||||    
T  39767248 aaagtttttaatttccaatgca-ttaattacacaaacttttataaaaaaattactatttgaggtccttaaccagtgctccggagacactagttaacatt 39767345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 3830431 - 3830468
Alignment:
Q  196 ctaacttttgcatggatcgccctttcaggttttcagtc 233  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  3830431 ctaacttttgcctggaccgccctttcaggttttcagtc 3830468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 24175420 - 24175367
Alignment:
Q  67 aaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||| ||||||||||||||||||||  ||||||||| |||||||  ||||||||    
T  24175420 aaaacttaccatttaaagtgcttaaagagtgccccgagggcacttcttaacatt 24175367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 45900158 - 45900117
Alignment:
Q  79 ttaaagtgcttaaccagtgccccgggggcactcgttaacatt 120  Q
    |||||||||||||  |||||||| ||||||||||||||||||    
T  45900158 ttaaagtgcttaaagagtgcccccggggcactcgttaacatt 45900117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3361538 - 3361498
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3361538 taacttttgcatagatcgccctttcgggttttcaatctatc 3361498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3362235 - 3362195
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3362235 taacttttgcatagatcgccctttcgggttttcaatctatc 3362195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3362932 - 3362892
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3362932 taacttttgcatagatcgccctttcgggttttcaatctatc 3362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 3384785 - 3384825
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3384785 taacttttgcatagatcgccctttcgggttttcaatctatc 3384825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 10505963 - 10506015
Alignment:
Q  21 tcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagtt 73  Q
    ||||||| |||||||| ||||  | ||||||||||||||||| ||||||||||    
T  10505963 tcaaagttttcaatttacaatatattttattacacaaactttaataaaaagtt 10506015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 14922560 - 14922520
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  14922560 taacttttgcatagatcgccctttcgggttttcaatctatc 14922520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 22709094 - 22709038
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    |||||||||||||||||  ||| ||||||||  ||||||||||| | ||||||||||    
T  22709094 atgtctctaacttttgcccggaccgcccttttgggttttcagtccaccgagacgctc 22709038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 22709154 - 22709114
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  22709154 taacttttgcatagatcgccctttcgggttttcaatctatc 22709114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 50086736 - 50086772
Alignment:
Q  85 tgcttaaccagtgccccgggggcactcgttaacattc 121  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  50086736 tgcttaaccaatgccccgggggcactggttaacattc 50086772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 20279 - 20123
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||| ||     
T  20279 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccatcgagacgctcttttttgcctaagccgccttttcaggtttgcgacttaccaa 20180  T
Q  288 acttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
     |||||| ||||| |||||||||||||||||||||| |||||| ||| ||| |||||    
T  20179 gctttttcattttaacaaagtatttcttgactgcatcggtatttacatgacttacaa 20123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 344
Target Start/End: Original strand, 141763 - 141919
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcag 287  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| | |||||| |||       |||||| ||||||||||| ||||||||| |||      
T  141763 atatgtctctaacttttgcatggaccgcccttttgggttttcagtccaccgagacactcttttttgcctaagtcgccttttcagttttgcgactcatcga 141862  T
Q  288 actttttattttcacaaagtatttcttgactgcattggtattcacaagacatacaat 344  Q
     ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  141863 gctttttattttaacaaagtatttcttgactgcattagtattcacaggacatacaat 141919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 343
Target Start/End: Complemental strand, 4439 - 4282
Alignment:
Q  188 atatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn-cctaagccgccttttcagatttgcgacttatca 286  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||        |||||| ||||||||||| |||||||||||||     
T  4439 atatgtctctaattttttcatggaccgccctttcaggttttcagtccatcgagacgctctttttttgcctaagtcgccttttcaggtttgcgacttatcg 4340  T
Q  287 gacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
      |||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||    
T  4339 agctttttcattttaacaaagtatttcttgactgcatcggtattcaccagacatacaa 4282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 343
Target Start/End: Original strand, 69958 - 70117
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnn----cctaagccgccttttcagatttgcgacttat 284  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||           |||||||||||||||||| ||||||||||||    
T  69958 tatgtttctaatttttgcatggaccgccctttcaggttttcagtccatcgagacgctcctttttttttgcctaagccgccttttcaggtttgcgacttat 70057  T
Q  285 cagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |   |||||| ||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  70058 cgagctttttcattttaacaaagtatttcttgactgcatcggtattcaccggacatacaa 70117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 343
Target Start/End: Complemental strand, 20322 - 20168
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcaga 288  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||| ||||||| ||||       |||||||||||||||||  |||||||||||||       
T  20322 tatgcctctaacttttgcatggactgccctttcgggttttcagtccatcgagatgctctttttc-cctaagccgccttttcaagtttgcgacttatcgag 20224  T
Q  289 cttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||| ||||| ||||||||||||||| |||||| |||||||||| |||||||||    
T  20223 ctttttcattttaacaaagtatttcttgtctgcatcggtattcacaggacatacaa 20168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 8140 - 7996
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||||||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  8140 atgtctctaatttttgcctggaccgccctttcaggttttcagtccaccgagacgctcatttttccctaagccgccttttcaggtttgcgacttatcgagc 8041  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattcaca 333  Q
     ||| | |||| ||| |||||||||||||||||  ||||||||||    
T  8040 ttttattttttgacagagtatttcttgactgcagcggtattcaca 7996  T

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Target: scaffold0582 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 3592 - 3734
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  3592 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 3691  T
Q  289 ctttttattttcacaaagtatttcttgactgcattggtattca 331  Q
     ||  | |||| ||||||||||||||||||||||||| |||||    
T  3692 tttcattttttgacaaagtatttcttgactgcattggcattca 3734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 21172 - 21300
Alignment:
Q  193 tctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagacttt 292  Q
    |||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   ||||    
T  21172 tctctaacttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagcttt 21271  T
Q  293 ttattttcacaaagtatttcttgactgca 321  Q
    |  |||| ||| |||||||||||||||||    
T  21272 tatttttgacagagtatttcttgactgca 21300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1661 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1661
Description:

Target: scaffold1661; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 336
Target Start/End: Complemental strand, 1261 - 1115
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| | || | ||||||| ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  1261 atgtctctaacttttgcctagaccaccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gaa 1163  T
Q  290 tttttattttc-acaaagtatttcttgactgcattggtattcacaaga 336  Q
    ||||||||||  ||| |||||||||||||||||  ||||| |||||||    
T  1162 tttttatttttgacagagtatttcttgactgcaccggtatccacaaga 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 336
Target Start/End: Complemental strand, 89751 - 89605
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| | || | ||||||| ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  89751 atgtctctaacttttgcctagaccaccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gaa 89653  T
Q  290 tttttattttc-acaaagtatttcttgactgcattggtattcacaaga 336  Q
    ||||||||||  ||| |||||||||||||||||  ||||| |||||||    
T  89652 tttttatttttgacagagtatttcttgactgcaccggtatccacaaga 89605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 8026 - 8170
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc-nnnnnnncctaagccgcc-ttttcagatttgcgacttatcaga 288  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||        |||||||| || ||||||| ||||||||||||| ||    
T  8026 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcattttttgcctaagccacctttttcaggtttgcgacttatc-ga 8124  T
Q  289 ctttttat-tttcacaaagtatttcttgactgcattggtattcaca 333  Q
      ||||||  || ||| ||||||||||||||||| |||||||||||    
T  8125 gcttttatgcttgacagagtatttcttgactgcactggtattcaca 8170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 31947 - 31892
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  31947 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 31892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 10550 - 10409
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||| | ||||||||||||| ||     
T  10550 atgtctctaacttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcgggtttgcgacttatc-gag 10452  T
Q  290 tttttat-tttcacaaagtatttcttgactgcattggtattca 331  Q
     |||||| ||| ||| |||||||||||||||||| || |||||    
T  10451 cttttatgtttgacagagtatttcttgactgcatcggcattca 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 10610 - 10570
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  10610 taacttttgcatagatcgccctttcgggttttcaatctatc 10570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 13422 - 13280
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  13422 atgtctctaatttttgcctggaccgccctttttggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 13323  T
Q  290 tttttattttc-acaaagtatttcttgactgcattggtattca 331  Q
    |||   ||||| ||||||||||||||||||||||||| |||||    
T  13322 tttcatttttcgacaaagtatttcttgactgcattggcattca 13280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 15923 - 16054
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| ||||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  15923 atgtctctaatttttgcctggaccgcccttttgggttttcagtccatcgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 16021  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  16022 cttttatgtttgacagagtatttcttgactgca 16054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 15863 - 15903
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  15863 taacttttgcatagatcgccctttcgggttttcaatctatc 15903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 32686 - 32555
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||   |    
T  32686 atgtctctaatttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatcgagc 32587  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||  |||| ||| |||||||||||||||||    
T  32586 ttttatttttgacagagtatttcttgactgca 32555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 27706 - 27611
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| |||||||||||||    
T  27706 atgtctctaatttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc 27611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 58992 - 59082
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatcagacttttt-attttcacaaagtatttcttgactgcattggtattcacaagacatacaa 343  Q
    |||||||||||||||||| |||||||||||||   |||||| ||||| ||||||||||||||||||||||  ||||| |||||||||||||    
T  58992 cctaagccgccttttcaggtttgcgacttatcgagctttttcattttaacaaagtatttcttgactgcatcagtatttacaagacatacaa 59082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 2649 - 2777
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  2649 atgtctctaacttttgcctggaccgcccttttgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 2747  T
Q  290 tttttat-tttcacaaagtatttcttgact 318  Q
     |||||| ||| ||| ||||||||||||||    
T  2748 cttttatatttgacagagtatttcttgact 2777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 1698 - 1569
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||||| ||||||||||| | ||     
T  1698 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgactta-ccgag 1600  T
Q  290 tttttat-tttcacaaagtatttcttgactg 319  Q
     |||||| ||| ||| |||||||||||||||    
T  1599 cttttatgtttgacagagtatttcttgactg 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 182523 - 182654
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  ||||||||||| | ||||||||||       ||||| ||| |||||||| ||||||||||||| ||     
T  182523 atgtctctaatttttgcctggaccgccctttttggttttcagtccaccgagacgctcatttttgcctaaaccgtcttttcaggtttgcgacttatc-gag 182621  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  182622 cttttatgtttgacagagtatttcttgactgca 182654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 182463 - 182503
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||| |||||||||||||||| ||||||    
T  182463 taacttttgcatagatcaccctttcaggttttcaatctatc 182503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 19392 - 19261
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||       |||||||||||||||| | ||||||||||||| ||     
T  19392 atgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctcatttttgcctaagccgccttttcgggtttgcgacttatc-gag 19294  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| || ||||||||||||||    
T  19293 cttttatgtttgacagagcatttcttgactgca 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 18655 - 18524
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||  |||||||| || | ||||||||||       |||||||||||||||||| ||||||||||||| ||     
T  18655 atgtctctaatttttgcctggaccgcccttttgggttttcactccaccgagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gag 18557  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  18556 cttttatgtttgacagagtatttcttgactgca 18524  T

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Target: scaffold0183 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 321
Target Start/End: Complemental strand, 33478 - 33348
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| ||||||||| |||||| |||| | ||||||||||       || |||||||||||| ||  ||||||||||||   |    
T  33478 atgtctctaatttttgcctggaccgccctttcgggtttttagtccaccgagacgctcatttttgccgaagccgcctttttaggcttgcgacttatcgagc 33379  T
Q  290 tttttattttcacaaagtatttcttgactgca 321  Q
    ||||| |||| |||||||||||||||||||||    
T  33378 ttttt-ttttgacaaagtatttcttgactgca 33348  T

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Target: scaffold0551 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 1612 - 1736
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagactttttat 296  Q
    |||||||||||| |||||||||||  ||||||||||| |  |||||||||       |||||||||||||||||| ||||||||||||| ||  || |||    
T  1612 taacttttgcatagatcgcccttttgggttttcagtccacagagacgctcatttttgcctaagccgccttttcaggtttgcgacttatc-gagcttatat 1710  T
Q  297 -tttcacaaagtatttcttgactgca 321  Q
     ||| ||| |||||||||||||||||    
T  1711 gtttgacagagtatttcttgactgca 1736  T

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Target: scaffold0327 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 331
Target Start/End: Complemental strand, 15897 - 15756
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||||| || |||||| || ||||||||||| | ||||||||||        |||||||||||||| || ||| |||||||||   |    
T  15897 atgtctctaatttttgcatagaccgccctctcgggttttcagtccaccgagacgctcatttttgtctaagccgcctttttaggttttcgacttatcgagc 15798  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattca 331  Q
    ||||  |||| ||| |||||||||||||||||  ||||||||    
T  15797 ttttatttttgacagagtatttcttgactgcaccggtattca 15756  T

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Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 333
Target Start/End: Complemental strand, 1865 - 1721
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc-nnnnnnncctaagccgccttttcagatttgcgacttatcaga 288  Q
    |||||||||| |||||| | || ||||||||||||||||||||| | ||||||||||        |||||||||| |||| || ||||||||||||| ||    
T  1865 atgtctctaatttttgcctagaccgccctttcaggttttcagtccaccgagacgctcattttttgcctaagccgcatttttaggtttgcgacttatc-ga 1767  T
Q  289 ctttttat-tttcacaaagtatttcttgactgcattggtattcaca 333  Q
      |||||| ||| ||| |||||||||||||||||  ||||||||||    
T  1766 gcttttatgtttgacagagtatttcttgactgcaccggtattcaca 1721  T

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Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 1925 - 1885
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  1925 taacttttgcatagatcgccctttcgggttttcaatctatc 1885  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 331
Target Start/End: Original strand, 190600 - 190741
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||| | |||||||||||||  ||||||||||| | |||| |||||        ||||||||||||||| | |||||||||||||   |    
T  190600 atgtctctaattttttcctggatcgcccttttgggttttcagtccaccgagtcgctcatttttgtctaagccgccttttccggtttgcgacttatcgagc 190699  T
Q  290 tttttattttcacaaagtatttcttgactgcattggtattca 331  Q
    ||||  |||| ||| |||||||||||||||||  ||||||||    
T  190700 ttttatttttgacagagtatttcttgactgcaccggtattca 190741  T

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Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 30018 - 30149
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatcagac 289  Q
    |||||||||| |||||| |||| |||||||||  |||||| ||| | ||||||||||       ||||||||||| |||||| ||| ||||||||| ||     
T  30018 atgtctctaatttttgcctggaccgccctttcgagttttctgtccaccgagacgctcatttttgcctaagccgccctttcaggttttcgacttatc-gag 30116  T
Q  290 tttttat-tttcacaaagtatttcttgactgca 321  Q
     |||||| ||| ||| |||||||||||||||||    
T  30117 cttttatgtttgacagagtatttcttgactgca 30149  T

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Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 29958 - 29998
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  29958 taacttttgcatagatcgccctttcgggttttcaatctatc 29998  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 321
Target Start/End: Original strand, 27706 - 27837
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc-aga 288  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||| | ||||||||||       ||||||||||||||| ||  |||| ||||||| |||    
T  27706 atgtctctaatttttgcctggaccgccctttcagtttttcagtccaccgagacgctcatttttgcctaagccgcctttttagggttgcaacttatcgaga 27805  T
Q  289 ctttttattttcacaaagtatttcttgactgca 321  Q
     ||||  |||| ||| |||||||||||| ||||    
T  27806 -ttttagttttgacagagtatttcttgagtgca 27837  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 77375 - 77342
Alignment:
Q  87 cttaaccagtgccccgggggcactcgttaacatt 120  Q
    ||||||||||||||||| ||||||||||||||||    
T  77375 cttaaccagtgccccggaggcactcgttaacatt 77342  T

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Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 27646 - 27686
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  27646 taacttttgcatagatcgccctttcgggttttcaatctatc 27686  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 26737 - 26793
Alignment:
Q  18 atgtcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttac 75  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||  |||||||||||    
T  26737 atgtcaaagttttcaattttcaatgcac-tgattacacaaactttcgtaaaaagttac 26793  T

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Target: scaffold1837 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1837
Description:

Target: scaffold1837; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 1160 - 1215
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  1160 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 1215  T

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Target: scaffold0094 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 32730 - 32785
Alignment:
Q  191 tgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||| |||||| |||| ||||||||| ||||||||||| | ||||||||||    
T  32730 tgtctctaatttttgcctggaccgccctttcgggttttcagtccaccgagacgctc 32785  T

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Target: scaffold0932 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 3817 - 3742
Alignment:
Q  196 ctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcag 271  Q
    ||||||||||| |||| ||||||||| ||||||||||| | || |||||||       ||||||||||||||||||    
T  3817 ctaacttttgcctggaccgccctttcgggttttcagtccaccgggacgctctctattgcctaagccgccttttcag 3742  T

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Target: scaffold0932; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3181 - 3141
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttcagtctatc 237  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3181 taacttttgcatagatcgccctttcgggttttcaatctatc 3141  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 303175 - 303080
Alignment:
Q  190 atgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctcnnnnnnncctaagccgccttttcagatttgcgacttatc 285  Q
    |||||||||| |||||| ||||  |||||||| ||||||||||| | ||||||||||       |||||| |||||||| || |||| ||||||||    
T  303175 atgtctctaatttttgcctggactgccctttcgggttttcagtccaccgagacgctccttttttcctaagtcgcctttttaggtttgtgacttatc 303080  T

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Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 33105 - 33048
Alignment:
Q  189 tatgtctctaacttttgcatggatcgccctttcaggttttcagtctatcgagacgctc 246  Q
    ||||||||||| |||||| |||| |||| |||| ||||||||||| | ||||||||||    
T  33105 tatgtctctaatttttgcctggaccgccatttcgggttttcagtccaccgagacgctc 33048  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 155170 - 155137
Alignment:
Q  197 taacttttgcatggatcgccctttcaggttttca 230  Q
    |||||||||||| |||||||||||||||||||||    
T  155170 taacttttgcatagatcgccctttcaggttttca 155137  T

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Target: scaffold0362 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 20 - 87
Alignment:
Q  254 cctaagccgccttttcagatttgcgacttatcagactttttat-tttcacaaagtatttcttgactgca 321  Q
    |||||||||||||||||| ||||||||||| | ||  |||||| ||| ||| |||||||||||||||||    
T  20 cctaagccgccttttcaggtttgcgactta-ccgagcttttatgtttgacagagtatttcttgactgca 87  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 62548 - 62488
Alignment:
Q  65 taaaaagttaccatttaaagtgcttaaccagtgccccgggggcactcgttaacattcctta 125  Q
    |||||| |||| |||||||||||||||  ||| |||||| | |||||||||||||| ||||    
T  62548 taaaaacttactatttaaagtgcttaaagagtaccccggagacactcgttaacatttctta 62488  T

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