View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5301_low_19 (Length: 263)
Name: NF5301_low_19
Description: NF5301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5301_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 34426768 - 34426996
Alignment:
| Q |
18 |
ctatgctattaagaatctgaaaatatctaaactaataatcgagtctgagaccattggtcaagtcaagaaaggattatctaaaaagctacaatatttaagg |
117 |
Q |
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| T |
34426768 |
ctatgctattaagaatctgaaaatatctaaactaataatcgagtctgagaccattggtcaagtcaagaaaggattatctaacaagctacaatatttaagg |
34426867 |
T |
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| Q |
118 |
ttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaagggcacaggatgtttgacatcaggagtacaaagttaatcaagatatga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
34426868 |
ttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaagggcacaggatgtttgacatcagtagtacaaagttaatcaagatatga |
34426967 |
T |
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| Q |
218 |
gataatatttcatagtttatacctctctg |
246 |
Q |
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||||||| ||||||||||||||||||||| |
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| T |
34426968 |
gataataattcatagtttatacctctctg |
34426996 |
T |
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