View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5303-Insertion-1 (Length: 1000)

Name: NF5303-Insertion-1
Description: NF5303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5303-Insertion-1
NF5303-Insertion-1
[»] chr4 (18 HSPs)
chr4 (8-562)||(39087738-39088292)
chr4 (8-447)||(39082199-39082638)
chr4 (8-458)||(39091233-39091683)
chr4 (559-802)||(39086678-39086919)
chr4 (114-474)||(39070769-39071128)
chr4 (816-959)||(39086246-39086393)
chr4 (231-421)||(39097556-39097746)
chr4 (565-667)||(39082071-39082173)
chr4 (748-899)||(39081890-39082037)
chr4 (382-439)||(39080279-39080336)
chr4 (360-422)||(39075094-39075156)
chr4 (240-293)||(7637054-7637107)
chr4 (243-295)||(7615238-7615290)
chr4 (243-295)||(7656216-7656268)
chr4 (360-435)||(7656327-7656402)
chr4 (240-286)||(7606233-7606279)
chr4 (360-421)||(7615118-7615179)
chr4 (538-607)||(39070664-39070731)
[»] scaffold0190 (1 HSPs)
scaffold0190 (244-435)||(4310-4501)
[»] chr8 (2 HSPs)
chr8 (240-323)||(15745017-15745100)
chr8 (360-419)||(34173991-34174050)
[»] chr7 (3 HSPs)
chr7 (243-297)||(8936171-8936225)
chr7 (240-286)||(8941813-8941859)
chr7 (360-421)||(8936282-8936343)


Alignment Details
Target: chr4 (Bit Score: 539; Significance: 0; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 8 - 562
Target Start/End: Complemental strand, 39088292 - 39087738
Alignment:
Q  8 gatgactcctccgcttgacgaggattattttggaaatgcagggatcattggtagtgtaataatgaaagcaggggagattctggaatgtgggataggaaaa 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39088292 gatgactcctccacttgacgaggattattttggaaatgcagggatcattggtagtgtaacaatgaaagcaggggagattctggaatgtgggataggaaaa 39088193  T
Q  108 tgttcattggagatgaacaagatgattatgttacgttctgatgagaaaataagggatgattatgagtgttggttgaaaatgccaaagttgttagggatta 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39088192 tgttcattggagatgaacaagatgattatgttacgttctgatgagaaaataagggatgattatgagtgttggttgaaaatgccaaagttgtttgggatta 39088093  T
Q  208 atagtttggcaggtgctaattcattggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39088092 atagtttggcaggtgctaattcattggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaag 39087993  T
Q  308 cgggggtgcgaataaaagtaatgggaagattactgtgtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggag 407  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39087992 cgggggtgcgaataaaagtaatgggaagattactgtgtttgctggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggag 39087893  T
Q  408 gctttgggaaatgatgctgagttcatggttcctagttctacttaatgtgacttgtaaattttgttataattatcttgtttgacacttgaattacaattct 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39087892 gctttgggaaatgatgctgagttcatggttcctagttctacttaatgtgacttgtaaattttgttataattatcttgtttgacacttgaattacaattct 39087793  T
Q  508 tgttttgagcttgttctaatgatgtaatggtgtaactgcatttatgtttattgag 562  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39087792 tgttttgagcttgttctaatgatgtaatggtgtaactgcatttatgtttattgag 39087738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 8 - 447
Target Start/End: Complemental strand, 39082638 - 39082199
Alignment:
Q  8 gatgactcctccgcttgacgaggattattttggaaatgcagggatcattggtagtgtaataatgaaagcaggggagattctggaatgtgggataggaaaa 107  Q
    ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| | |||| ||||||||  ||||||||||||||||||||||| ||||||    
T  39082638 gatgattcctccacttgacgagggttattttggaaatgcagcgatctttggtggggtaacaatgaaagtgggggagattctggaatgtgggattggaaaa 39082539  T
Q  108 tgttcattggagatgaacaagatgattatgttacgttctgatgagaaaataagggatgattatgagtgttggttgaaaatgccaaagttgttagggatta 207  Q
      | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || |   ||     
T  39082538 gttgctttggagatgaacaagatgattatgttgcgttctgatgagaaaataagggatgattatgagtgttggttgagaatgccgaagttatttgaagttg 39082439  T
Q  208 atagtttggcaggtgctaattcattggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaag 307  Q
     || ||||||||||   ||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  39082438 gtaatttggcaggtagcaattcattggcgacgagtagttctcagaggtttgatgtttatggtaatgattttggttgggggaagccggtaggggttcgaag 39082339  T
Q  308 cgggggtgcgaataaaagtaatgggaagattactgtgtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggag 407  Q
     |||||| | |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  39082338 tgggggttcaaataaaagtaatgggaagattactgtgtatgctggagctgaagaaggtagcattgatattgaagtttgtctttctttcgagatattggag 39082239  T
Q  408 gctttgggaaatgatgctgagttcatggttcctagttcta 447  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  39082238 gctttgggaaatgatgccgagttcttggttcctagttcta 39082199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 8 - 458
Target Start/End: Complemental strand, 39091683 - 39091233
Alignment:
Q  8 gatgactcctccgcttgacgaggattattttggaaatgcagggatcattggtagtgtaataatgaaagcaggggagattctggaatgtgggataggaaaa 107  Q
    ||||| |||||||||||| ||||||||||||||||||||    || |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  39091683 gatgattcctccgcttgaggaggattattttggaaatgcttcaatgattggtggtgtaacaatgaaagcaggggagattctggaatgtgggattggaaaa 39091584  T
Q  108 tgttcattggagatgaacaagatgattatgttacgttctgatgagaaaataagggatgattatgagtgttggttgaaaatgccaaagttgttagggatta 207  Q
      | | |||||| | |||||||||||||||| || |||||||||||||||||||||| | |||||||||||||||| |||||| ||| | || ||||||     
T  39091583 gttgctttggagttaaacaagatgattatgtcacattctgatgagaaaataagggattactatgagtgttggttgagaatgccgaagatttttgggattg 39091484  T
Q  208 atagtttggcaggtgctaattcattggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaag 307  Q
    ||  |||| | |||| |||| | ||||  || ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| |||||| || |    
T  39091483 atgttttgacgggtggtaatacgttgggaacaagtagttctccgaggtttgatgtttacggtaatgattttggttgggggaagcctgtgggggttagatg 39091384  T
Q  308 cgggggtgcgaataaaagtaatgggaagattactgtgtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggag 407  Q
    ||| ||||||||||| | |||||| |||||||| |||||| |||| | ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39091383 cggaggtgcgaataagaataatggaaagattaccgtgtttgctggggttgaagaaggtagcatagatgttgaagtttgtctttcttatgagattttggag 39091284  T
Q  408 gctttgggaaatgatgctgagttcatggttcctagttctacttaatgtgac 458  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  39091283 gctttgggaaatgatgctgagttcttggttcctagttctaagtaatgtgac 39091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 559 - 802
Target Start/End: Complemental strand, 39086919 - 39086678
Alignment:
Q  559 tgagttgctatttacattttttctggtctgaaattgtttaggatatgcttgtttgaacaataattaaggatatgtcacattgctgtttcaattatttggt 658  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39086919 tgagttgctatttacattttttctggtctgaaattgtttaggatatgcttgtttgaacaataattaaggatatgttacattgctgtttcaattatttggt 39086820  T
Q  659 ttctacttgatgacatgttggtctgtaatctgtatctgaacattgtacaaatgaatctagtctttggataatagcttgaacttgaacagaaagcttctac 758  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  39086819 ttctacttgttgacatgttggtctgtaatctgtatctgaacattgtacaaatgaatctagtctttgg---atagcttgaacttgaaccgaaagcttctac 39086723  T
Q  759 caaaaaatatgttc-gagaagttcttcgcaggtacaaattttaat 802  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  39086722 caaaaaatatgttctgagaagttcttcgcaggtacaaattttaat 39086678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 114 - 474
Target Start/End: Complemental strand, 39071128 - 39070769
Alignment:
Q  114 ttggagatgaacaagatgattatgttacgttctgatgagaaaataagggatgattatgagtgttggttgaaaatgccaaagttgttagggattaatagtt 213  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||| |  |||| |||| |||||||| ||  |  | ||||||    | |  |||||    
T  39071128 ttggagataaacaagatgattttgttacattctgatgagaaaataaggaaccattacgagtcttggttgagaacacgcaggttgttccaaagtggtagtt 39071029  T
Q  214 tggcaggtgctaattcattggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaagcggggg 313  Q
     |  ||||| ||||   ||||| |  || |||||||| ||||||||||||| ||  ||||||||||| ||||| ||||| || | ||||||||| ||| |    
T  39071028 cgctaggtggtaataagttggcaatcagcagttctccgaggtttgatgtttttggcaatgattttggctggggaaagccagtggcggttcgaagtgggag 39070929  T
Q  314 tgcgaataaaagtaatgggaagattactgtgtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttg 413  Q
    ||  ||||| | |||||| || |||| ||| ||| |||| ||||| |||||||| || ||| ||||| ||||||||||||||||||||||||||||||||    
T  39070928 tggtaataagaataatggaaaaattagtgtttttgctggtgctgaagaaggtagtatagatgttgaaatttgtctttcttatgagattttggaggctttg 39070829  T
Q  414 ggaaatgatgctgagttcatggttcctagttctacttaatgtgacttgtaaattttgttat 474  Q
    | |||||||| ||||||| ||||||| | |||||  ||||||||||||| |||||||||||    
T  39070828 gcaaatgatgttgagttcttggttccaatttctaagtaatgtgacttgt-aattttgttat 39070769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 816 - 959
Target Start/End: Complemental strand, 39086393 - 39086246
Alignment:
Q  816 ttaaaggtaatgtatatcgatgatagtaagtaa----gtaagattgaaatctattcaataaatgaaaaatataagcagttgagctactagcccaaaccaa 911  Q
    |||||||||||||||||||||||| ||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39086393 ttaaaggtaatgtatatcgatgatggtaagtaattaagtaagattgaaatctattcaataaatgaaaa-tataagcagttgagctactagcccaaaccaa 39086295  T
Q  912 actcaattttacggatttttctccgctttgat--gggttggatatgagtt 959  Q
    ||||||||| ||||| ||||||||| ||||||  || |||||||||||||    
T  39086294 actcaatttgacgga-ttttctccgttttgattgggtttggatatgagtt 39086246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 231 - 421
Target Start/End: Complemental strand, 39097746 - 39097556
Alignment:
Q  231 ttggctacgagtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaagcgggggtgcgaataaaagtaatg 330  Q
    ||||| || |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||| |  ||| |||| |||||||| ||||||||| |||    
T  39097746 ttggcaactagtagttctccaaggtttgatgtttatggtaatgactttggttggggtaagcctgttgctgttagaagtgggggtgcaaataaaagtgatg 39097647  T
Q  331 ggaagattactgtgtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatga 421  Q
    | | ||| ||| |||||| |||    || |||||||| |||||| |||||||||| ||||||||||| |||||||||||| ||||||||||    
T  39097646 gaacgataactatgtttagtgggatagaagaaggtagtattgatgttgaagtttgcctttcttatgatattttggaggctatgggaaatga 39097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 565 - 667
Target Start/End: Complemental strand, 39082173 - 39082071
Alignment:
Q  565 gctatttacattttttctggtctgaaattgtttaggatatgcttgtttgaacaataattaaggatatgtcacattgctgtttcaattatttggtttctac 664  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  39082173 gctatttacaatttttctggtctgaaattgtttaggatatgcttgggtgaacaatatttaaggatatgtcactttgctgtttcaattatttggttactac 39082074  T
Q  665 ttg 667  Q
    |||    
T  39082073 ttg 39082071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 748 - 899
Target Start/End: Complemental strand, 39082037 - 39081890
Alignment:
Q  748 aaagcttctaccaaaa-aatatgttcgagaagttcttcgcaggtacaaattttaatatatgtttgctacttaaaggtaatgtatatcgatgatagtaagt 846  Q
    ||||||||||| |||  |||||||||||||| |||||| ||| ||||| | ||||||||| ||||||| ||||| ||||||||||||||||||     ||    
T  39082037 aaagcttctactaaagtaatatgttcgagaacttcttcccagttacaattcttaatatatctttgctatttaaatgtaatgtatatcgatgat----ggt 39081942  T
Q  847 aagtaagattgaaatctattcaataaatgaaaaatataagcagttgagctact 899  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  39081941 aagtaagatagaaatctattgaataaatg-aaaatataagcagttgagctact 39081890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 39080336 - 39080279
Alignment:
Q  382 tttgtctttcttatgagattttggaggctttgggaaatgatgctgagttcatggttcc 439  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  39080336 tttgtctttcttatgaaattttggaggctttgggaaatgatactgagttcatggttcc 39080279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 39075156 - 39075094
Alignment:
Q  360 gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatgat 422  Q
    ||||||||  |||||||| ||||||||||| ||||||| |||||||||||| |||||||||||    
T  39075156 gaaggtagtgttgatattcaagtttgtcttccttatgatattttggaggctatgggaaatgat 39075094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 7637107 - 7637054
Alignment:
Q  240 agtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcct 293  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||| ||||||    
T  7637107 agtagttctccatggtttgatgtttatggtaatgattttggatggggaaagcct 7637054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 7615290 - 7615238
Alignment:
Q  243 agttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgt 295  Q
    ||||||||  ||||||||||||||| |||||||||||||||||| ||||||||    
T  7615290 agttctccgtggtttgatgtttatggtaatgattttggttggggaaagcctgt 7615238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 7656216 - 7656268
Alignment:
Q  243 agttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgt 295  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| ||||||||    
T  7656216 agttctccaaagtttgatgtttatggtaatgattttggatggggaaagcctgt 7656268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 7656327 - 7656402
Alignment:
Q  360 gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatgatgctgagttcatgg 435  Q
    |||| |||||||||  || |||| |||||| ||||  |||||||||||||  ||||||||||| ||||||||||||    
T  7656327 gaagctagcattgaccttcaagtgtgtcttccttacaagattttggaggcaatgggaaatgatcctgagttcatgg 7656402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 7606279 - 7606233
Alignment:
Q  240 agtagttctccaaggtttgatgtttatgataatgattttggttgggg 286  Q
    |||||||||||| ||||||||||||||| ||||||||| || |||||    
T  7606279 agtagttctccatggtttgatgtttatggtaatgatttcggatgggg 7606233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 7615179 - 7615118
Alignment:
Q  360 gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatga 421  Q
    |||||||| || ||| || |||||||||||||  ||||||||||||||||  ||||||||||    
T  7615179 gaaggtagtatagatcttcaagtttgtctttcacatgagattttggaggcaatgggaaatga 7615118  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 39070731 - 39070664
Alignment:
Q  538 tgtaactgcatttatgtttattgagttgctatttacattttttctggtctgaaattgtttaggatatgct 607  Q
    ||||||||||||| |||||| | ||||||| ||||||||| | ||||| |||| ||||||||||||||||    
T  39070731 tgtaactgcattt-tgtttaataagttgctttttacatttat-ctggtatgaacttgtttaggatatgct 39070664  T

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Target: scaffold0190 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 4501 - 4310
Alignment:
Q  244 gttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaagcgggggtgcgaataaaagtaatgggaagattactgt 343  Q
    |||||||  ||||||||||||||| |||||||||||||||||| || ||||| ||||||||||| |||||| | |||||||| ||||| ||||||  |||    
T  4501 gttctccttggtttgatgtttatggtaatgattttggttggggaaaacctgtgggggttcgaagtgggggttcaaataaaagaaatggaaagatttatgt 4402  T
Q  344 gtttactggagctgacgaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatgatgctgagttcatgg 435  Q
    || | | || |  || || |||||||| ||  ||||||| |||||| ||| ||| |||||||||||  |  |||||||| ||||||| ||||    
T  4401 gtatgcaggtgtagaagatggtagcatggaccttgaagtatgtcttccttgtgaaattttggaggcaattagaaatgatcctgagtttatgg 4310  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 323
Target Start/End: Original strand, 15745017 - 15745100
Alignment:
Q  240 agtagttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtaggggttcgaagcgggggtgcgaataaa 323  Q
    |||||||| ||  |||||||||||||||  ||||||||||||||||| || ||||| ||||||||||  |||||||| ||||||    
T  15745017 agtagttcaccctggtttgatgtttatggcaatgattttggttggggaaaacctgtgggggttcgaactgggggtgcaaataaa 15745100  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 34174050 - 34173991
Alignment:
Q  360 gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaat 419  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||||||||||| | ||||||    
T  34174050 gaaggtagtattgatattcaagtttgtcttccttatgatattttggaggctattggaaat 34173991  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 8936171 - 8936225
Alignment:
Q  243 agttctccaaggtttgatgtttatgataatgattttggttgggggaagcctgtag 297  Q
    ||||||||  ||||||||||||||| |||||||||||| ||||| ||||||||||    
T  8936171 agttctccgtggtttgatgtttatggtaatgattttggatggggaaagcctgtag 8936225  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 8941813 - 8941859
Alignment:
Q  240 agtagttctccaaggtttgatgtttatgataatgattttggttgggg 286  Q
    |||||||||||| ||||||||||||||| ||||||||| || |||||    
T  8941813 agtagttctccatggtttgatgtttatggtaatgatttcggatgggg 8941859  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 8936282 - 8936343
Alignment:
Q  360 gaaggtagcattgatattgaagtttgtctttcttatgagattttggaggctttgggaaatga 421  Q
    |||||||| |||||  || ||||||||||| | |||||||||||||||||  ||||||||||    
T  8936282 gaaggtagtattgaccttcaagtttgtcttccatatgagattttggaggcaatgggaaatga 8936343  T

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